Metagenome / Metatranscriptome Family F092659

Basic Information
Family ID	F092659
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	63 residues
Representative Sequence	MRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEG
Number of Associated Samples	76
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.24 %
% of genes near scaffold ends (potentially truncated)	29.91 %
% of genes from short scaffolds (< 2000 bps)	88.79 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Unclassified (72.897 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.907 % of family members)
Environment Ontology (ENVO)	Unclassified (32.710 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.766 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 0.00% Coil/Unstructured: 43.48%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF08238	Sel1	2.80
PF07813	LTXXQ	1.87
PF04392	ABC_sub_bind	1.87
PF00313	CSD	0.93
PF04434	SWIM	0.93
PF04773	FecR	0.93
PF13565	HTH_32	0.93
PF13181	TPR_8	0.93
PF09948	DUF2182	0.93
PF00536	SAM_1	0.93
PF03069	FmdA_AmdA	0.93
PF00578	AhpC-TSA	0.93
PF00311	PEPcase	0.93
PF04860	Phage_portal	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	7.48
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.87
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.93
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.93
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.93
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.93
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
All Organisms	root	All Organisms	27.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
cellular organisms	root	All Organisms → cellular organisms	27.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.76 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.89 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.35 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.54 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.54 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.67 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.90 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	3.74 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.93 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.93 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN01A0DWA	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	533	Open in IMG/M
2170459013\|GO6OHWN01AHIQ5	Not Available	509	Open in IMG/M
2170459013\|GO6OHWN02FKO2P	Not Available	519	Open in IMG/M
2189573000\|GPBTN7E01BAVRZ	Not Available	500	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105633755	Not Available	546	Open in IMG/M
3300003505\|JGIcombinedJ51221_10478854	Not Available	502	Open in IMG/M
3300004139\|Ga0058897_10762731	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_103301099	Not Available	872	Open in IMG/M
3300005764\|Ga0066903_107824028	Not Available	549	Open in IMG/M
3300006041\|Ga0075023_100551909	Not Available	528	Open in IMG/M
3300006047\|Ga0075024_100148535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1066	Open in IMG/M
3300006057\|Ga0075026_100813284	Not Available	568	Open in IMG/M
3300006086\|Ga0075019_10216818	Not Available	1136	Open in IMG/M
3300006172\|Ga0075018_10267640	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	833	Open in IMG/M
3300006176\|Ga0070765_102285534	Not Available	504	Open in IMG/M
3300006606\|Ga0074062_10017347	Not Available	687	Open in IMG/M
3300006893\|Ga0073928_10681089	Not Available	719	Open in IMG/M
3300006893\|Ga0073928_10814231	Not Available	644	Open in IMG/M
3300006893\|Ga0073928_11039513	Not Available	556	Open in IMG/M
3300006953\|Ga0074063_14237214	Not Available	739	Open in IMG/M
3300007982\|Ga0102924_1080189	Not Available	1728	Open in IMG/M
3300009698\|Ga0116216_10923038	Not Available	522	Open in IMG/M
3300009824\|Ga0116219_10649262	Not Available	578	Open in IMG/M
3300010154\|Ga0127503_10423657	Not Available	584	Open in IMG/M
3300010361\|Ga0126378_11158266	Not Available	872	Open in IMG/M
3300010361\|Ga0126378_13359219	Not Available	508	Open in IMG/M
3300011120\|Ga0150983_10230120	Not Available	1410	Open in IMG/M
3300011120\|Ga0150983_12012485	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300012951\|Ga0164300_11091917	Not Available	521	Open in IMG/M
3300012957\|Ga0164303_11044548	Not Available	585	Open in IMG/M
3300012958\|Ga0164299_11546010	Not Available	520	Open in IMG/M
3300012961\|Ga0164302_11154648	Not Available	616	Open in IMG/M
3300012986\|Ga0164304_10796285	Not Available	729	Open in IMG/M
3300012986\|Ga0164304_11653052	Not Available	535	Open in IMG/M
3300012989\|Ga0164305_11804098	Not Available	552	Open in IMG/M
3300014325\|Ga0163163_13073736	Not Available	520	Open in IMG/M
3300016270\|Ga0182036_11033814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	678	Open in IMG/M
3300016294\|Ga0182041_10371972	Not Available	1208	Open in IMG/M
3300016319\|Ga0182033_11158973	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300016341\|Ga0182035_10575672	Not Available	970	Open in IMG/M
3300016387\|Ga0182040_10060726	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300016404\|Ga0182037_10400259	Not Available	1131	Open in IMG/M
3300016422\|Ga0182039_10778160	Not Available	848	Open in IMG/M
3300017933\|Ga0187801_10184850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	822	Open in IMG/M
3300020579\|Ga0210407_10348432	Not Available	1158	Open in IMG/M
3300020579\|Ga0210407_10421324	Not Available	1044	Open in IMG/M
3300020579\|Ga0210407_10885262	Not Available	685	Open in IMG/M
3300020579\|Ga0210407_10972507	Not Available	648	Open in IMG/M
3300020580\|Ga0210403_10577544	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300020580\|Ga0210403_10728988	Not Available	792	Open in IMG/M
3300020581\|Ga0210399_10141458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1986	Open in IMG/M
3300020581\|Ga0210399_10634084	Not Available	882	Open in IMG/M
3300021088\|Ga0210404_10025889	All Organisms → cellular organisms → Bacteria	2578	Open in IMG/M
3300021168\|Ga0210406_10025693	All Organisms → cellular organisms → Bacteria	5405	Open in IMG/M
3300021168\|Ga0210406_10550797	Not Available	906	Open in IMG/M
3300021168\|Ga0210406_10958413	Not Available	640	Open in IMG/M
3300021171\|Ga0210405_10809673	Not Available	717	Open in IMG/M
3300021178\|Ga0210408_10631782	Not Available	846	Open in IMG/M
3300021178\|Ga0210408_11050147	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300021181\|Ga0210388_10740786	Not Available	855	Open in IMG/M
3300021405\|Ga0210387_10994265	Not Available	735	Open in IMG/M
3300021420\|Ga0210394_10084946	All Organisms → cellular organisms → Bacteria	2733	Open in IMG/M
3300021420\|Ga0210394_10527304	Not Available	1039	Open in IMG/M
3300021420\|Ga0210394_10947444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	747	Open in IMG/M
3300021420\|Ga0210394_11767321	Not Available	516	Open in IMG/M
3300021433\|Ga0210391_10644716	Not Available	831	Open in IMG/M
3300021474\|Ga0210390_11138984	Not Available	632	Open in IMG/M
3300021475\|Ga0210392_11200854	Not Available	568	Open in IMG/M
3300021479\|Ga0210410_10878367	Not Available	783	Open in IMG/M
3300021559\|Ga0210409_10447651	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300021559\|Ga0210409_10669468	Not Available	908	Open in IMG/M
3300022530\|Ga0242658_1054682	Not Available	855	Open in IMG/M
3300022533\|Ga0242662_10146354	Not Available	711	Open in IMG/M
3300022557\|Ga0212123_10025501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6368	Open in IMG/M
3300022557\|Ga0212123_10076643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2847	Open in IMG/M
3300022557\|Ga0212123_10236267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1323	Open in IMG/M
3300022557\|Ga0212123_10504769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	784	Open in IMG/M
3300022726\|Ga0242654_10271672	Not Available	614	Open in IMG/M
3300024227\|Ga0228598_1016908	Not Available	1439	Open in IMG/M
3300025134\|Ga0207416_1033667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2369	Open in IMG/M
3300027161\|Ga0208368_105383	Not Available	674	Open in IMG/M
3300027172\|Ga0208098_1036205	Not Available	515	Open in IMG/M
3300027894\|Ga0209068_10178743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1160	Open in IMG/M
3300028792\|Ga0307504_10384802	Not Available	548	Open in IMG/M
3300028906\|Ga0308309_11193696	Not Available	656	Open in IMG/M
3300031170\|Ga0307498_10146248	Not Available	780	Open in IMG/M
3300031226\|Ga0307497_10067086	Not Available	1311	Open in IMG/M
3300031231\|Ga0170824_107096861	Not Available	3061	Open in IMG/M
3300031231\|Ga0170824_125302277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300031469\|Ga0170819_13421373	All Organisms → cellular organisms → Bacteria → Proteobacteria	2084	Open in IMG/M
3300031736\|Ga0318501_10800361	Not Available	522	Open in IMG/M
3300031912\|Ga0306921_11550533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300031912\|Ga0306921_11642468	Not Available	697	Open in IMG/M
3300031942\|Ga0310916_10544569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300031954\|Ga0306926_10681168	Not Available	1249	Open in IMG/M
3300031954\|Ga0306926_11937139	Not Available	665	Open in IMG/M
3300031954\|Ga0306926_12359607	Not Available	588	Open in IMG/M
3300031962\|Ga0307479_11546397	Not Available	620	Open in IMG/M
3300032160\|Ga0311301_10109322	All Organisms → cellular organisms → Bacteria	5320	Open in IMG/M
3300032180\|Ga0307471_104249128	Not Available	506	Open in IMG/M
3300032205\|Ga0307472_100668448	Not Available	929	Open in IMG/M
3300032261\|Ga0306920_100667742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1534	Open in IMG/M
3300032261\|Ga0306920_102650169	Not Available	686	Open in IMG/M
3300032261\|Ga0306920_104031135	Not Available	533	Open in IMG/M
3300032515\|Ga0348332_10389657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.24%
Aquatic	Environmental → Aquatic	15.89%
Plants	Host-Associated → Plants	1.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	8.41%
Sediment	Environmental → Aquatic → Sediment	5.61%
Freshwater	Environmental → Aquatic → Freshwater	1.87%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.93%
Roots	Host-Associated → Plants → Roots	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.96%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.93%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.35%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	8.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.67%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.93%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.93%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.35%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	8.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	3.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.93%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300027161	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_08831490	2170459013	Grass Soil	MREALLFVIVVAMVATGLWLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
N57_00684230	2170459013	Grass Soil	DPVGSCRFPPPWSVEESEELMRKALLFVIVVAMVATGLWLFVAGLFFENETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEV
N57_06948680	2170459013	Grass Soil	MRTALLFVIVVTMVATGLWLFVAGLFFENETNIRYVVSGSWLIGLGGDQLWRDFVAPFLGFEEG
N55_04432590	2189573000	Grass Soil	MRKALLFVIVVAMVATGLWLFVGGLFFESETNIWYVVSGGWLIGLGGDPLWRDFVAPFLGFEEG
INPhiseqgaiiFebDRAFT_1056337552	3300000364	Soil	MRKALLFVIVVAMXATGLWLFVAGLFFEXETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEG*
JGIcombinedJ51221_104788541	3300003505	Forest Soil	MREALLFVIVVAMVSTGLWLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG*
Ga0058897_107627311	3300004139	Forest Soil	MRKALLFVIVVAMVATGLWLFVGGLFFESETNIWYVVSGGWLIGLGGDRLWRGFVALFLGFQEG*
Ga0066903_1033010991	3300005764	Tropical Forest Soil	MLDRPSPSRVGAKTVRLVLAVAMVATGLWLFVAGLFFDETNIWYVVGGGWLIGLGGDRLWNDLLAPSWASNKVE*
Ga0066903_1078240282	3300005764	Tropical Forest Soil	MVSTGLWLFVAGLFGESETNIWYVVGGGWLIGLGGDRLWTEFLAPYLGFEQG*
Ga0075023_1005519091	3300006041	Watersheds	MLKALLFVIVVAIVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE*
Ga0075024_1001485351	3300006047	Watersheds	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE*
Ga0075026_1008132842	3300006057	Watersheds	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE*
Ga0075019_102168181	3300006086	Watersheds	MREALLFLIVVAMAATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEG*
Ga0075018_102676402	3300006172	Watersheds	MRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEG*
Ga0070765_1022855342	3300006176	Soil	MRKALLFVIVVAVVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEERLNDIKRP*
Ga0074062_100173471	3300006606	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVASSWASKKVE*
Ga0073928_106810892	3300006893	Iron-Sulfur Acid Spring	MRKALLFVIVVAMVATGLWLFVAGLFFKSETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEV*
Ga0073928_108142313	3300006893	Iron-Sulfur Acid Spring	MRKALLFVIVVAVVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVA
Ga0073928_110395131	3300006893	Iron-Sulfur Acid Spring	MREALLFLIVVAMAATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVA
Ga0074063_142372142	3300006953	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEG*
Ga0102924_10801892	3300007982	Iron-Sulfur Acid Spring	MREALLFLIVVAMAATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFFAPFLGFEEP*
Ga0116216_109230381	3300009698	Peatlands Soil	TPRCTLEELMRTALLFVFVVAMVATGLWLFVAGLSFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE*
Ga0116219_106492621	3300009824	Peatlands Soil	MRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLRGDRLWRDFVAPFLGFEEG*
Ga0127503_104236572	3300010154	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFVGFEEV*
Ga0126378_111582661	3300010361	Tropical Forest Soil	MAVAMVASGLWLFVAGLFGESETNIWFVIGGGWLIGLGGDRLWSDFLGPYLGYEQG*
Ga0126378_133592191	3300010361	Tropical Forest Soil	MAIAIAANGLWLFAAGLFFENETNVWFVIGGGWLIGLGGDQLWSDFLGPYLGFEQG*
Ga0150983_102301201	3300011120	Forest Soil	MRKALLFVIVVAVVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRGFVALFLGFEEG*
Ga0150983_120124852	3300011120	Forest Soil	KALLFVIVVAMVATGLWLFVGGLFFESETNIWYVVSGGWLIGLGGDPLWRDFVAPFLGFEEG*
Ga0164300_110919171	3300012951	Soil	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIDLGGDRLWRDFVAPFLGFEE*
Ga0164303_110445482	3300012957	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDQLWRDFVAPFLG
Ga0164299_115460101	3300012958	Soil	MANRFPPRWSIFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVARFLSFEEV*
Ga0164302_111546481	3300012961	Soil	MRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIDLGGDRLWRDFVAPFLGFEE*
Ga0164304_107962852	3300012986	Soil	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEP*
Ga0164304_116530521	3300012986	Soil	MRKALLFVIVVAMVATGLWLFVGGLFFESETNIWYVVSGGWLIGLGGDPLWRDFVAPFLGFEEG*
Ga0164305_118040981	3300012989	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIDLGGDRLWRDFVAPFLGFEE*
Ga0163163_130737362	3300014325	Switchgrass Rhizosphere	MVATGLCLFVAGLFFATETNIWFIIGGGWLIGLGGDHLWSVVLAPFLGFERG*
Ga0182036_110338141	3300016270	Soil	MAVAMVASGLWLFVAGLFFENETNIWFIIGGGWLIGLGGDRLWSSFLAPYLGFEG
Ga0182041_103719721	3300016294	Soil	PPRAGAKAVLLVMAVAMVASGLWLFVAGLFGESETNIWFVIGGGWLIGLGGDRLWSDFLGPYLGYEQG
Ga0182033_111589732	3300016319	Soil	MLYRPPPPRTGARAVLLVMAVAMVASGLWLFVAGLFGESETNIWFVIGGGWLIGLGGDRLWSDFLGPYLGYEQG
Ga0182035_105756721	3300016341	Soil	MVAGGLWLFVAGLYGESETNIWFVIGGGWLIGLGGDRLWSDFLGPYLGYEQG
Ga0182035_117211671	3300016341	Soil	LRSLWVATGQWLFVAGLFFESETNIWFVITGGWVIGLGGDQLRREYLARPSWISKKVE
Ga0182040_100607261	3300016387	Soil	RAKALLFVIAVAMVASGLWLFVAGLFGESETNIWYAVGGGWLIGLGGDRLWNEFLAPFLGFEQG
Ga0182040_114937162	3300016387	Soil	LRSLWVATGQWLFVAGLFFESETNIWFVIGGGWLIGLGGDRLWSSFLAPYLGFEQG
Ga0182037_104002592	3300016404	Soil	MAVSGLWLFVAGLFFENETNVWFVIGGGWLIGLGGDQLWSDFLGPYLGFEQG
Ga0182039_107781602	3300016422	Soil	MLYRPPRARAKALLFVIAVAMVATGLWLFVAGLFFESETNIWFVITGGWLIGLGGDQLWRNFLAPYLGFEEG
Ga0187801_101848502	3300017933	Freshwater Sediment	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE
Ga0210407_103484322	3300020579	Soil	MRKALLLVIVVTMVATGLWLFVAGLFSESETNIWYVVSGGWLIGLGGDRLWRGFVALFLGFEEG
Ga0210407_104213241	3300020579	Soil	MREALLFLIVVAMAATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEG
Ga0210407_108852621	3300020579	Soil	VHTVGDSMRKALLFVIVVAMVATGLWLFGAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEL
Ga0210407_109725071	3300020579	Soil	MANRFPPRWSIFVIVVAMLATGLWLFVAGLFFESETNVWYVVSGGWLIGLGGDRLWRDFVARFLGFEEV
Ga0210403_105775442	3300020580	Soil	MREALLFVIVVAMVATGLRLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
Ga0210403_107289882	3300020580	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFAAPFLGFEEG
Ga0210399_101414584	3300020581	Soil	MRTTLLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLG
Ga0210399_106340841	3300020581	Soil	MREALLFVIVVAMAATGLWLFVAKLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEG
Ga0210404_100258894	3300021088	Soil	MREALLFVIVVAMVATGLRLFVAGLLFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
Ga0210406_1002569310	3300021168	Soil	MRKALLLVIVVTMVATGLWLFVAGLLSESETNIWYVVSGGWLIGLGGDRLWRGFVALFLGFEEG
Ga0210406_105507972	3300021168	Soil	LMRKALLFVIVVAMVATGLWLFVGGLFFESETNIWYVVSGGWLIGLGGDPLWRDFVAPFLGFEEG
Ga0210406_109584132	3300021168	Soil	PVHTVGESMRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGERLWRDFVAPFLGFEE
Ga0210405_108096732	3300021171	Soil	RLRQFRGRPCCTVEELMRKALLFVIVVVMVATGLWLFVAGLFFENEVNIWYVVSGGWLIGLGGDLLWRGFVAPFLGLEEG
Ga0210408_106317821	3300021178	Soil	MRTTLLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE
Ga0210408_110501471	3300021178	Soil	AMAATGLWLFVAKLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEG
Ga0210388_107407862	3300021181	Soil	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRD
Ga0210387_109942651	3300021405	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVASFLGFEEP
Ga0210394_100849462	3300021420	Soil	MREALLFVIVVAMVATGLRLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFQEG
Ga0210394_105273041	3300021420	Soil	VVAMVTTGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE
Ga0210394_109474442	3300021420	Soil	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAP
Ga0210394_117673211	3300021420	Soil	PCCTVEELMRKALLFVIVVAMVATGLWLFVGGLFFESETNIWYVVSGGWLIGLGGDPLWRDFVAPFLGFEEG
Ga0210391_106447161	3300021433	Soil	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFVEG
Ga0210390_111389841	3300021474	Soil	MREALLFVIVVAMVATGLRLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLG
Ga0210392_112008541	3300021475	Soil	MREALLFVIVVAMAATGLWLFVAKLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGLRIVD
Ga0210410_108783671	3300021479	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLTGLGGDRLWRDFVAPFLG
Ga0210409_104476513	3300021559	Soil	FVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE
Ga0210409_106694682	3300021559	Soil	MRTTLLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFVEG
Ga0242658_10546821	3300022530	Soil	MREALLFVIVVAMVATGLWLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFQEG
Ga0242662_101463541	3300022533	Soil	VHTVGESTRKALLFVIVVAMVATGLWLFVAGLFFENETNIWYVVSGGWLIGLGGDRLWRGFVALFLGFEEG
Ga0212123_100255014	3300022557	Iron-Sulfur Acid Spring	VHTVGESMRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFFAPFLGFEEP
Ga0212123_100766434	3300022557	Iron-Sulfur Acid Spring	MREALLFVIVVAMVASGLRLFVAGLFFGKRNQHLVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
Ga0212123_102362673	3300022557	Iron-Sulfur Acid Spring	MRKALLFVIVVAMVATGLWLFVAGLFFKSETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEV
Ga0212123_105047691	3300022557	Iron-Sulfur Acid Spring	PSAGDPMHKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGSDRLWRDFVAPFLGFEEV
Ga0242654_102716722	3300022726	Soil	MRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEP
Ga0228598_10169081	3300024227	Rhizosphere	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE
Ga0207416_10336671	3300025134	Iron-Sulfur Acid Spring	MREALLFLIVVAMAATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE
Ga0208368_1053831	3300027161	Forest Soil	MRKALLLVIVVTMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
Ga0208098_10362051	3300027172	Forest Soil	MREALLFVIVVAMVATGLWLFVAGLFSESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE
Ga0209068_101787431	3300027894	Watersheds	MRTALLFVFVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGERLWRD
Ga0307504_103848021	3300028792	Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFFGFEEG
Ga0308309_111936962	3300028906	Soil	MREALLFVIVVAMVSTGLWLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
Ga0307498_101462482	3300031170	Soil	VHTVGESMRKALLFVIVVAMVATGLWLFVAGLFFENETNIWYVVGGGWLIGLGGDQLWRDFV
Ga0307497_100670862	3300031226	Soil	MREALLFVIVVAMVATGLWLFVAGPFFESETNIWDVVSGGWLIGLGGDRLWRDFVAPFLGFEEG
Ga0170824_1070968611	3300031231	Forest Soil	MREALLFLIVVAMAATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLSFEEV
Ga0170824_1253022772	3300031231	Forest Soil	MRTALLFVIVVAMVATGLWLFVAGLFFESETDIWYVVSGGWLIGLGGDRLWRGFVAPFLGLRIAD
Ga0170819_134213733	3300031469	Forest Soil	MVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
Ga0318501_108003611	3300031736	Soil	MAVAMVASGLWLFVAGLFGESETKIWFVIGGGWLIGLGGDRLWSSFLAPYLGFEG
Ga0306921_115505331	3300031912	Soil	MAVAMVASGLWLFVAGLFGESETNIWFVIGGGWLIGLGGDRLWSDFLGPYLGYEQG
Ga0306921_116424681	3300031912	Soil	IAVAMIATGLWLFVAGFFFESETNVWFVITGGWLIGLGGDQLWRNFLAPYLGFEQG
Ga0310916_105445691	3300031942	Soil	MVASGLWLFVAGLFGESETNIWFVIGGGWLIGLGGDRLWSDFLGPYLGYEQG
Ga0306926_106811683	3300031954	Soil	VLAVAMAVSGLWLFVAGLFFENETNIWFVVGGGWLIGLGGDRLWSSFLAPYLGFEQG
Ga0306926_119371391	3300031954	Soil	MVATGLWLFVAGLFGESETNIWYVVGGGWLIGLGGDRLWNDLLAPLLGFEQG
Ga0306926_123596071	3300031954	Soil	AKAVLLVMAVAMVASGLWLFVAGLFGESETNIWFVIGGGWLIGLGGDRLWSDFLGPYLGYEQG
Ga0307479_115463972	3300031962	Hardwood Forest Soil	MRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEEV
Ga0311301_101093229	3300032160	Peatlands Soil	MRKALLFVIVVAMVATGLWLFVAGLFFESETNIWYVVSGGWLIGLRGDRLWRDFVAPFLGFEEG
Ga0307471_1042491281	3300032180	Hardwood Forest Soil	MREALLFVIVVAMVATGLRLFVAGLLFENETNIWYVVSGGWLIGLGGDQLWRDF
Ga0307472_1006684481	3300032205	Hardwood Forest Soil	YTVEESMREALLFVIVVAMVATGLWLFVAGLFFENETNIWYVVSGGWLIGLGGDQLWRDFVAPFLGFEEG
Ga0306920_1006677422	3300032261	Soil	MLYRTPRSPGGRAKALLFVIAVAMIATGLWLFVAGFFFESETNVWFVITGGWLIGLGGDQLWSDFLGPYLGFEQG
Ga0306920_1026501692	3300032261	Soil	MRKAFLFVIVFAMIVTGLWLFVVGLFSESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFQY
Ga0306920_1040311351	3300032261	Soil	ARAKALLFVIAVAMVATGLWLFVAGLFFESETNIWFVITGGWVIGLGGDQLWREYLARPSWISKKIE
Ga0348332_103896571	3300032515	Plant Litter	VHTVGESIRKALLFVIVVAMVATGLWLFVGGLFFESETNIWYVVSGGWLIGLGGDRLWRDFVAPFLGFEE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092659

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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