Metagenome / Metatranscriptome Family F092685

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092685
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	96 residues
Representative Sequence	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALAL
Number of Associated Samples	93
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.17 %
% of genes near scaffold ends (potentially truncated)	96.26 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.654 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (26.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.645 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.55% β-sheet: 6.38% Coil/Unstructured: 51.06%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00196	GerE	80.37
PF02518	HATPase_c	8.41
PF00885	DMRL_synthase	0.93
PF08281	Sigma70_r4_2	0.93
PF13490	zf-HC2	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0054	6,7-dimethyl-8-ribityllumazine synthase (Riboflavin synthase beta chain)	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.65 %
Unclassified	root	N/A	9.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.65 %
Unclassified	root	N/A	9.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.65 %
Unclassified	root	N/A	9.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.50 %
Unclassified	root	N/A	9.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	78.50 %
Unclassified	root	N/A	9.35 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	78.50 %
Unclassified	root	N/A	9.35 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	74.77 %
Unclassified	root	N/A	9.35 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.80 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.77 %
Unclassified	root	N/A	9.35 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.80 %
Curvibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.77 %
Unclassified	root	N/A	9.35 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	2.80 %
Curvibacter gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter gracilis	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	74.77 %
Unclassified	root	N/A	9.35 %
Phytohabitans suffuscus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	2.80 %
Curvibacter gracilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter gracilis	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_10895382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300003203\|JGI25406J46586_10181434	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300004463\|Ga0063356_105799333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter gracilis	530	Open in IMG/M
3300005341\|Ga0070691_10307851	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005562\|Ga0058697_10447998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300005562\|Ga0058697_10593690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300005983\|Ga0081540_1095466	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300006169\|Ga0082029_1288862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300006169\|Ga0082029_1527758	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300006845\|Ga0075421_100718127	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300006847\|Ga0075431_101677939	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006904\|Ga0075424_100070312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3665	Open in IMG/M
3300009098\|Ga0105245_11346069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300009100\|Ga0075418_11040920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300009156\|Ga0111538_12338552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300009789\|Ga0126307_11068327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300009811\|Ga0105084_1020490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1091	Open in IMG/M
3300009815\|Ga0105070_1019587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1169	Open in IMG/M
3300009816\|Ga0105076_1096366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300009817\|Ga0105062_1018819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1150	Open in IMG/M
3300009817\|Ga0105062_1124002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300009819\|Ga0105087_1039299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300009836\|Ga0105068_1013480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1344	Open in IMG/M
3300009836\|Ga0105068_1025307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1022	Open in IMG/M
3300009837\|Ga0105058_1034728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1098	Open in IMG/M
3300009837\|Ga0105058_1106726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300010029\|Ga0105074_1006858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1735	Open in IMG/M
3300010037\|Ga0126304_10891400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300010038\|Ga0126315_10543948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300010041\|Ga0126312_10918968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300010041\|Ga0126312_11152455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300010042\|Ga0126314_11141207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300010044\|Ga0126310_11270987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300010044\|Ga0126310_11476245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300010045\|Ga0126311_11424763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300010145\|Ga0126321_1165223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1180	Open in IMG/M
3300010145\|Ga0126321_1514609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300010166\|Ga0126306_11225050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300010375\|Ga0105239_11353195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	822	Open in IMG/M
3300010999\|Ga0138505_100056057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300010999\|Ga0138505_100069600	Not Available	520	Open in IMG/M
3300012022\|Ga0120191_10086644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300012353\|Ga0137367_10408667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M
3300012355\|Ga0137369_10348824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300012355\|Ga0137369_11129833	Not Available	510	Open in IMG/M
3300012359\|Ga0137385_10284449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1426	Open in IMG/M
3300012938\|Ga0162651_100062747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300013307\|Ga0157372_12526134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300014487\|Ga0182000_10278087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300017965\|Ga0190266_10023535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1847	Open in IMG/M
3300018053\|Ga0184626_10201946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300018063\|Ga0184637_10630728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300018073\|Ga0184624_10410616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300018075\|Ga0184632_10285857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300018469\|Ga0190270_13328978	Not Available	510	Open in IMG/M
3300018481\|Ga0190271_12747871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300020003\|Ga0193739_1065122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300020016\|Ga0193696_1037632	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300021078\|Ga0210381_10160299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300021445\|Ga0182009_10120849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300022756\|Ga0222622_10025188	All Organisms → cellular organisms → Bacteria	3093	Open in IMG/M
3300025927\|Ga0207687_10400545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1129	Open in IMG/M
3300025961\|Ga0207712_10054006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2821	Open in IMG/M
3300026653\|Ga0208846_100390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300026670\|Ga0208216_102936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300026672\|Ga0208214_100597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1318	Open in IMG/M
3300026686\|Ga0208213_100790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1096	Open in IMG/M
3300027032\|Ga0209877_1002410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1435	Open in IMG/M
3300027490\|Ga0209899_1027967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300027561\|Ga0209887_1037055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300027761\|Ga0209462_10052683	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300027809\|Ga0209574_10296476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300028590\|Ga0247823_10416411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300028608\|Ga0247819_10832264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300028708\|Ga0307295_10090317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300028710\|Ga0307322_10004242	All Organisms → cellular organisms → Bacteria	3021	Open in IMG/M
3300028711\|Ga0307293_10062202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	1168	Open in IMG/M
3300028712\|Ga0307285_10040765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1137	Open in IMG/M
3300028719\|Ga0307301_10222997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300028791\|Ga0307290_10025356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	2085	Open in IMG/M
3300028791\|Ga0307290_10371698	Not Available	523	Open in IMG/M
3300028814\|Ga0307302_10384546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300028872\|Ga0307314_10042205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans suffuscus	1121	Open in IMG/M
3300028876\|Ga0307286_10004762	All Organisms → cellular organisms → Bacteria	4036	Open in IMG/M
3300028881\|Ga0307277_10056687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1604	Open in IMG/M
3300028881\|Ga0307277_10205630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300030498\|Ga0268247_10334693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300030514\|Ga0268253_10196180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300031058\|Ga0308189_10473499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300031092\|Ga0308204_10186527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300031114\|Ga0308187_10129118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300031421\|Ga0308194_10041305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1139	Open in IMG/M
3300031548\|Ga0307408_101644269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300031824\|Ga0307413_11246706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300031824\|Ga0307413_11964496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300031901\|Ga0307406_11780732	Not Available	547	Open in IMG/M
3300031911\|Ga0307412_10113947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1935	Open in IMG/M
3300032004\|Ga0307414_10400233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1192	Open in IMG/M
3300032005\|Ga0307411_12089795	Not Available	530	Open in IMG/M
3300032126\|Ga0307415_101253995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300032159\|Ga0268251_10368006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300034150\|Ga0364933_109288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300034417\|Ga0364941_081448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.83%
Host-Associated	Host-Associated	26.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.36%
Plants	Host-Associated → Plants	26.17%
Aquatic	Environmental → Aquatic	7.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.82%
Phylloplane	Host-Associated → Plants → Phylloplane	5.61%
Sediment	Environmental → Aquatic → Sediment	4.67%
Freshwater	Environmental → Aquatic → Freshwater	2.80%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Floodplain	Environmental → Terrestrial → Floodplain	1.87%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.82%
Sand	Environmental → Terrestrial → Soil → Sand	14.95%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.67%
Loam	Environmental → Terrestrial → Soil → Loam	4.67%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	14.95%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	5.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.67%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.93%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.50%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	14.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.48%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	5.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.67%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.74%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026653	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1105 (SPAdes)	Environmental	Open in IMG/M
3300026670	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1111 (SPAdes)	Environmental	Open in IMG/M
3300026672	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1102 (SPAdes)	Environmental	Open in IMG/M
3300026686	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1097 (SPAdes)	Environmental	Open in IMG/M
3300027032	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030498	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e (v2)	Host-Associated	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_108953821	3300000890	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALAL
JGI25406J46586_101814341	3300003203	Tabebuia Heterophylla Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVELWAPVLGRLSDGPTTVPVLGMASRDTSVDVTPALALGVTDL
Ga0063356_1057993331	3300004463	Arabidopsis Thaliana Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDAS
Ga0070691_103078512	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLV
Ga0058697_104479981	3300005562	Agave	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENVEALRSVDAQRPALVVVPLDEVERWAPVLGRLSDGPTTVP
Ga0058697_105936902	3300005562	Agave	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVIVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDISVDVTPAL
Ga0081540_10954661	3300005983	Tabebuia Heterophylla Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVIVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLVDRV
Ga0082029_12888621	3300006169	Termite Nest	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVIVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTSPCNSDDLVGGVTASMRGRRSGRGPD
Ga0082029_15277581	3300006169	Termite Nest	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENVEALRSVDAQWPALVIVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNSEELVDRVASS
Ga0075421_1007181272	3300006845	Populus Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTAVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVDRVTSSMRG
Ga0075431_1016779391	3300006847	Populus Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLAVALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPAL
Ga0075424_1000703121	3300006904	Populus Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVIVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLV
Ga0105245_113460692	3300009098	Miscanthus Rhizosphere	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDAS
Ga0075418_110409202	3300009100	Populus Rhizosphere	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTAVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVERVTSS
Ga0111538_123385522	3300009156	Populus Rhizosphere	LPAHVLVLDAAQGIGPWARDALGDGGLACALVTNDDEALRTLDAQRPALVVVPIEEVRRWAPVLARLSEGPTTVPVLGLA
Ga0126307_110683271	3300009789	Serpentine Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLVDRVTSS
Ga0105084_10204902	3300009811	Groundwater Sand	VLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSEGPTTVPVLGMASRDASVDVTPALALGVTDLLTFPCNVDDLVDRVS
Ga0105084_10346431	3300009811	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRL
Ga0105070_10195871	3300009815	Groundwater Sand	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPV
Ga0105076_10963662	3300009816	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRD
Ga0105062_10188191	3300009817	Groundwater Sand	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRDTSVDVTPALALGVTDLLTYPCT
Ga0105062_11240022	3300009817	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRLSEGPTTVPVLGVASRDASIDV
Ga0105087_10392992	3300009819	Groundwater Sand	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRDTSVDVTPALALGVTDLLTYPCTGDDLVERV
Ga0105066_10832081	3300009822	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRLSE
Ga0105068_10134801	3300009836	Groundwater Sand	VPAHVLVLDAAEGIGPWARDALARAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRDTSVDVTPALALGVTDLLTYPCTGDDLVERVTSSM
Ga0105068_10253071	3300009836	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRLSEGPTTVPVLGVASRDASIDVTPALALGVTDLLTYPCTGDDLVERVTSSM
Ga0105058_10347282	3300009837	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRLSEGPTTVPVLGVASRDASIDVTPALALG
Ga0105058_11067261	3300009837	Groundwater Sand	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGV
Ga0105074_10068581	3300010029	Groundwater Sand	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRDTSVDVTPALALGVTDLLTYPCTGDDLVERVT
Ga0126304_108914002	3300010037	Serpentine Soil	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVT
Ga0126315_105439481	3300010038	Serpentine Soil	VQLPIWELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGM
Ga0126312_109189681	3300010041	Serpentine Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENLEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLVDRVTS
Ga0126312_111524552	3300010041	Serpentine Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDTSVDVTPALALGVTDLLT
Ga0126314_111412072	3300010042	Serpentine Soil	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENIEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTP
Ga0126310_112709872	3300010044	Serpentine Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLVD
Ga0126310_114762451	3300010044	Serpentine Soil	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGP
Ga0126311_114247632	3300010045	Serpentine Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDTSVDVTPALALGVTD
Ga0126321_11652232	3300010145	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLAVALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALVLGVTDLLTYPCNGD
Ga0126321_15146091	3300010145	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEHVEARRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRDASVDVTPALALGVTDLLTYPCTG
Ga0126306_112250502	3300010166	Serpentine Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLVDRVTS
Ga0105239_113531951	3300010375	Corn Rhizosphere	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVL
Ga0138505_1000560571	3300010999	Soil	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACSLVKENLEALRSVDAQWPALVVVPLDEVERWAPVLDRLGDGPTTVPVLGMASRDASVDVTPA
Ga0138505_1000696001	3300010999	Soil	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNG
Ga0120191_100866441	3300012022	Terrestrial	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWEQVLSRLSEGPTTVPVLGVASRDASID
Ga0137367_104086672	3300012353	Vadose Zone Soil	LSLPAHVLVLDAAQGIGPWARDALSDAGLASALISDDDEALRTVDTQRPAMVVLPIEEVRRWAPVLARLGEGPTTVPVLGLASRDASVDVTPALQVGV
Ga0137369_103488241	3300012355	Vadose Zone Soil	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRLSEGPTTVPVLGVASRDASIDVTPARALGVTDLLTYPCTSDDLVDRVTSSMRGRRPPRGPDRTEQASPM
Ga0137369_111298331	3300012355	Vadose Zone Soil	VLVLDAAQGIGPWARDALSEAGLASALITDDDEALRTVDTQRPAMVVLPIEKVRRWAPVLARLGEGPTTVPVL
Ga0137385_102844491	3300012359	Vadose Zone Soil	VLVLDATKGIGPWARDALHDAGLACALVKEEIEAQRSVDAQWPALVVVPIEEIRTWAAVLGRLGEGPTTVPVLGVASRDASIDVTPALAVGVTDLLTHPCTSDDLIVRVTSSMRGRRIPRGPDRVEQGSPLAALRS
Ga0157285_100490472	3300012897	Soil	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLS
Ga0162651_1000627471	3300012938	Soil	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACSLVKENLEALRSVDAQWPALVVVPLDEVERWAPVLDRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLL
Ga0157372_125261341	3300013307	Corn Rhizosphere	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASV
Ga0182000_102780872	3300014487	Soil	VLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVELWAPVLGRLSDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLVDRVTSSMRGRRS
Ga0190266_100235351	3300017965	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVDRVTSSMRGR
Ga0184626_102019462	3300018053	Groundwater Sediment	LPAHVLVLDAAKGIGPWARDALNDAGLACALVKEEIEARRSVDAQWPVLVVVPIDEIRTWAPVLTRLAEGPTSVPVLGVASRDASIDVTPALAVGVTDLLTYPCTNEDLIVRVTSSMRGRRG
Ga0184637_106307282	3300018063	Groundwater Sediment	VPAHVLVLDAAEGIGPWARDALAHAGLACAPVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLG
Ga0184624_104106162	3300018073	Groundwater Sediment	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALALGVTDLLT
Ga0184632_102858572	3300018075	Groundwater Sediment	LPAHVLVLDAAKGIGPWARDALNDAGLACALVKEEIEARRSVDAQWPVLVVVPIDEIRTWAPVLTRLAEGPTSVPVLGVASRDASIDVTPALAVGVTHLLTYPCTNEDL
Ga0190270_133289781	3300018469	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVDRVT
Ga0190271_127478711	3300018481	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENLEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDAS
Ga0193739_10651222	3300020003	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSEGPTTVPVLGMAS
Ga0193696_10376323	3300020016	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTV
Ga0210381_101602992	3300021078	Groundwater Sediment	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCN
Ga0182009_101208492	3300021445	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVDRVTTSMR
Ga0222622_100251885	3300022756	Groundwater Sediment	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGP
Ga0207687_104005452	3300025927	Miscanthus Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASV
Ga0207712_100540064	3300025961	Switchgrass Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASR
Ga0208846_1003901	3300026653	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDA
Ga0208216_1029361	3300026670	Soil	VPAHVLVLDAAEGIGPWARDALAGAGLACALVKENLEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPV
Ga0208214_1005971	3300026672	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALALG
Ga0208213_1007902	3300026686	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVVVPLDEVRRWSPVLERLAEGPTAIPTSAP
Ga0209877_10024101	3300027032	Groundwater Sand	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRDTSVDVTPALALGV
Ga0209899_10279671	3300027490	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRLSEGPTTVPVLGVASRDASIDVTPALALGVTDLLTYPCTPDDLV
Ga0209887_10370551	3300027561	Groundwater Sand	LPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEARRSVDAQWPALVMVPLDEVQRWERVLSRLSEGPTTVPVLGVASRDASIDVTPALALGVTDLLTYP
Ga0209462_100526831	3300027761	Agave	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVELWAPVLGRLSDGP
Ga0209574_102964761	3300027809	Agave	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVT
Ga0247823_104164111	3300028590	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDL
Ga0247819_108322642	3300028608	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTAVPVLGMASRDTSVDVTPALALGVTDLLTYP
Ga0307295_100903172	3300028708	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLAVALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASR
Ga0307322_100042425	3300028710	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALAL
Ga0307293_100622021	3300028711	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACSLVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTP
Ga0307285_100407651	3300028712	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVDRVTS
Ga0307301_102229971	3300028719	Soil	LPAHVLVLDAAQGIGPWARDALGDAGLASALVTDDDEALRTLDTQRPALVVLPIEEVRRWAPVLARLGEGPTTVPVLG
Ga0307290_100253561	3300028791	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPC
Ga0307290_103716982	3300028791	Soil	LPAHVLVLDAAQGIGPWARDALGDAGLASALVTDDDEALRTLDTQRPALVVLPIEEVRRWAPVLARLGEGPTTVPVLGL
Ga0307302_103845462	3300028814	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVQRWSPVLERLAEGPTTVPVLGVASRDTSVDVTPALALGVTDLLTYPCTGDDL
Ga0307310_100283104	3300028824	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDG
Ga0307314_100422052	3300028872	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTT
Ga0307286_100047621	3300028876	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLAVALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALVLGVTDLLTYPC
Ga0307277_100566871	3300028881	Soil	LPAHVLVLDAAQGIGPWARDALSDAGLASALISDDDEALRTVDTQRPAMVVLPIEEVRRWAPVLARLGEGPTTVPVL
Ga0307277_102056302	3300028881	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLSYPCNGD
Ga0268247_103346931	3300030498	Agave	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVD
Ga0268253_101961801	3300030514	Agave	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALAL
Ga0308189_104734992	3300031058	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRD
Ga0308204_101865271	3300031092	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNG
Ga0308187_101291182	3300031114	Soil	VPAHVLVLDAAEGIGPWARDALAHAGLACSLVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMAS
Ga0308194_100413051	3300031421	Soil	LPAHVLVLDAAKGIGPWARDALHDAGLACALVKEEIEAQRSVDAQWPALVVVPIDEIRGWASVLGRLGEGPTSVP
Ga0307408_1016442692	3300031548	Rhizosphere	VPAHVLILDAAEGIGPWARDALAHAGLACALVKEDVEALRSVDAQWPALVVVPLDEVLRWSPVLERLAEGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCTSEDLVDR
Ga0307413_112467061	3300031824	Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTSA
Ga0307413_119644961	3300031824	Rhizosphere	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASR
Ga0307406_117807321	3300031901	Rhizosphere	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENVEALRSVDAQWPALVVVPLDEVQRWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVERVTSSMRGR
Ga0307412_101139471	3300031911	Rhizosphere	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENVEALRSVDAQWPALVIVPLDEVERWAPVLGRLGDGPTAVPVLGMASRDASVDVTPALALGVTDLLTYPCTSEDLV
Ga0307414_104002333	3300032004	Rhizosphere	VPAHVLVLDAAEGIGPWARDALAQAGLACALVKENVEALRSVDAQWPALVIVPLDEVERWAPVLGRLGDGPTAVPVLGMASRDASV
Ga0307411_120897951	3300032005	Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCN
Ga0307415_1012539951	3300032126	Rhizosphere	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLSDGPTTVPVLGMASRDTS
Ga0268251_103680062	3300032159	Agave	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENLEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDTSVDVTPALALGVTDLLTYPCNGDDLVDRVTSS
Ga0364933_109288_427_702	3300034150	Sediment	VPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTAVPVLGMASRDASVDVTPAL
Ga0364941_081448_3_365	3300034417	Sediment	LELPVPAHVLVLDAAEGIGPWARDALAHAGLACALVKENVEALRSVDAQWPALVVVPLDEVERWAPVLGRLGDGPTTVPVLGMASRDASVDVTPALALGVTDLLTYPCNGDDLVDRVTSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences