NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092822

Metagenome Family F092822

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092822
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 42 residues
Representative Sequence MYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Number of Associated Samples 9
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 33.33 %
% of genes near scaffold ends (potentially truncated) 2.80 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 5
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (97.196 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont
(51.402 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.82%    β-sheet: 17.95%    Coil/Unstructured: 69.23%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF05923APC_r 1.87
PF00085Thioredoxin 1.87
PF08390TRAM1 1.87
PF00852Glyco_transf_10 0.93
PF13855LRR_8 0.93
PF02020W2 0.93
PF00170bZIP_1 0.93
PF01564Spermine_synth 0.93
PF00153Mito_carr 0.93
PF05699Dimer_Tnp_hAT 0.93
PF00078RVT_1 0.93
PF12752SUZ 0.93
PF00531Death 0.93
PF00400WD40 0.93
PF00999Na_H_Exchanger 0.93
PF04791LMBR1 0.93
PF00063Myosin_head 0.93
PF00298Ribosomal_L11 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.93
COG0080Ribosomal protein L11Translation, ribosomal structure and biogenesis [J] 0.93
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.93
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.93
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.93
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A97.20 %
All OrganismsrootAll Organisms2.80 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005967|Ga0056128_1008582All Organisms → cellular organisms → Eukaryota → Opisthokonta12869Open in IMG/M
3300027098|Ga0209367_1001247All Organisms → cellular organisms → Eukaryota30613Open in IMG/M
3300027208|Ga0209671_1019966All Organisms → cellular organisms → Eukaryota → Opisthokonta6811Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont51.40%
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont48.60%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003769Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius geniculatus HERON ISLAND.2Host-AssociatedOpen in IMG/M
3300003944Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius geniculatus LIZARD ISLANDHost-AssociatedOpen in IMG/M
3300005871Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius sp. 4 HERON ISLANDHost-AssociatedOpen in IMG/M
3300005967Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius geniculatus LIZARD ISLAND.2Host-AssociatedOpen in IMG/M
3300027098Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius geniculatus LIZARD ISLAND.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027118Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius geniculatus HERON ISLAND.1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027175Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius geniculatus LIZARD ISLAND (SPAdes)Host-AssociatedOpen in IMG/M
3300027208Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius geniculatus HERON ISLAND.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027338Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius sp. 4 HERON ISLAND (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0049118_1009663033300003769Marine Gutless Worms SymbiontMLTEWIYYTVSQKKACDYIFCNNWNNECLIIIIFGTLINETICH
Ga0049118_1010005713300003769Marine Gutless Worms SymbiontMWYYTVSQKKACDYIFCNNWNNECLIIIIFGTLINETVCHRMVVSNPTSSI
Ga0049118_1012686123300003769Marine Gutless Worms SymbiontMYTVSQKKAFDYIFCNNLNNECPIIIIFGTLINETICHRMVVS
Ga0049119_101412383300003944Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNNECPIIITFGSLINETICHRMVVSFPT
Ga0056124_105712753300005871Marine Gutless Worms SymbiontMIIYTVSQKKTCDYIFCNNLNNKCPIIIIFGTLISETI
Ga0056124_107334923300005871Marine Gutless Worms SymbiontVTHLHDYTVSQKKTCDYIFCNNLNNKCPIIIIFGTLISETISHRM
Ga0056128_100027013300005967Marine Gutless Worms SymbiontMSLYTVSQKKACDYIFGNNWNNECPIIIIFGTLINETIC
Ga0056128_100158113300005967Marine Gutless Worms SymbiontMLTEWIYYTVSQKKACDYIFCNNWNNECLIIIIFGTLINETICHQMVVSFP
Ga0056128_1002915173300005967Marine Gutless Worms SymbiontVSQKKACDYIFCNNLNNECPIIIIFGTLINENMCH
Ga0056128_1004995243300005967Marine Gutless Worms SymbiontVSQKKACDYIFCNNWNNECPIIIIFGTLINETICH
Ga0056128_1007266333300005967Marine Gutless Worms SymbiontMALVLYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVVS
Ga0056128_1008582193300005967Marine Gutless Worms SymbiontMSDL*AYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0056128_1008620283300005967Marine Gutless Worms SymbiontMYYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0056128_1009370133300005967Marine Gutless Worms SymbiontMLHDSFIYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0056128_1009399163300005967Marine Gutless Worms SymbiontMRVKAKHDINYTVSQKKARDYIFCNNLNNECPIIIIFGTLINETICHRMVVSFPTSSI
Ga0056128_1014868103300005967Marine Gutless Worms SymbiontVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0056128_1015647123300005967Marine Gutless Worms SymbiontMLI*QLYIVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHRMVV
Ga0056128_102304613300005967Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0056128_103169673300005967Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0056128_103385873300005967Marine Gutless Worms SymbiontMYTVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHRM
Ga0056128_103650413300005967Marine Gutless Worms SymbiontMQFWHLYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRM
Ga0056128_103948863300005967Marine Gutless Worms SymbiontMFSYIYTVSQKKHVTTFFCNNWNNECPIIIIFGTLINETICHRM
Ga0056128_103996713300005967Marine Gutless Worms SymbiontMIYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICH
Ga0056128_104189583300005967Marine Gutless Worms SymbiontMAYYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0056128_104291213300005967Marine Gutless Worms SymbiontMPPHTPIYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETI
Ga0056128_104316573300005967Marine Gutless Worms SymbiontMWLLYTVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHRM
Ga0056128_104533433300005967Marine Gutless Worms SymbiontVWVTDLNYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0056128_104607233300005967Marine Gutless Worms SymbiontMRGGKCKIYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0056128_104853643300005967Marine Gutless Worms SymbiontLADNYTVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHR
Ga0056128_104987543300005967Marine Gutless Worms SymbiontVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHR
Ga0056128_105570823300005967Marine Gutless Worms SymbiontMNYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHRM
Ga0056128_105710143300005967Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETMCHRM
Ga0056128_106281313300005967Marine Gutless Worms SymbiontLFLHDVEIYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINENMCHRM
Ga0056128_106361113300005967Marine Gutless Worms SymbiontVTSWLYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRM
Ga0056128_106510233300005967Marine Gutless Worms SymbiontMYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0056128_106797633300005967Marine Gutless Worms SymbiontMHYVHYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0056128_107930223300005967Marine Gutless Worms SymbiontMATNGNQIYTVSQKKACDYIFCNNLNNECPIIIIFGTLINENMCHRM
Ga0056128_108267613300005967Marine Gutless Worms SymbiontVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0056128_108340813300005967Marine Gutless Worms SymbiontVSQKKACDYIFCNNWNNECLIIIIFGTLINETICHQMVVSFP
Ga0056128_108465913300005967Marine Gutless Worms SymbiontMYTVSQKKAFDYIFCNNLNNECPIIIIFGTLINETICHRMVVSFPTSSI
Ga0056128_108472913300005967Marine Gutless Worms SymbiontMLHCIGLYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0056128_108746513300005967Marine Gutless Worms SymbiontVIPGVYIYTVSQKKACDYIFCNNLNSECPIIIIFGTLINETICHRMVVSFPT
Ga0209367_1001247193300027098Marine Gutless Worms SymbiontVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHRM
Ga0209367_1004701103300027098Marine Gutless Worms SymbiontVSQKKACDYIFCNNLNNECPIIIIFGTLINENMCHRMVVS
Ga0209367_101003413300027098Marine Gutless Worms SymbiontMNYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICH
Ga0209367_101398773300027098Marine Gutless Worms SymbiontMDLYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETI
Ga0209367_101406713300027098Marine Gutless Worms SymbiontVFIYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETIC
Ga0209367_101598513300027098Marine Gutless Worms SymbiontVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHRMVVSFPTSS
Ga0209367_101973813300027098Marine Gutless Worms SymbiontMYYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVVSFPISS
Ga0209367_102636413300027098Marine Gutless Worms SymbiontMIILTYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVV
Ga0209367_103494853300027098Marine Gutless Worms SymbiontMGFSINDYTVSQKKACDYIFCNNLNNECPIIIIFGTLINENMCHRMVVS
Ga0209367_103790543300027098Marine Gutless Worms SymbiontMFSYIYTVSQKKHVTTFFCNNWNNECPIIIIFGTLINETI
Ga0209367_103884413300027098Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICPRMVVS
Ga0209367_104020913300027098Marine Gutless Worms SymbiontLKPIYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVVSFP
Ga0209367_104128733300027098Marine Gutless Worms SymbiontVWVTDLNYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVVSFPISS
Ga0209367_104178013300027098Marine Gutless Worms SymbiontMVTGILTFYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHRMVVSFPTSS
Ga0209367_104554813300027098Marine Gutless Worms SymbiontMSDLXAYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHRMVVSFPTSS
Ga0209367_104745223300027098Marine Gutless Worms SymbiontVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHRMVVS
Ga0209454_100702663300027118Marine Gutless Worms SymbiontMLHDSFIYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETIC
Ga0209454_101391913300027118Marine Gutless Worms SymbiontVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHRMV
Ga0209454_101547153300027118Marine Gutless Worms SymbiontMLQLCNYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETIC
Ga0209454_101833953300027118Marine Gutless Worms SymbiontMSIHIYTVSQKKACDYIFCNNWNNECPIIIIFGTLINE
Ga0209454_102285133300027118Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETI
Ga0209454_102326763300027118Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNWNNECPIIIIFGTLINET
Ga0209454_104660513300027118Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMV
Ga0209454_104662943300027118Marine Gutless Worms SymbiontMIYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETI
Ga0209454_104701713300027118Marine Gutless Worms SymbiontMGFSINDYTVSQKKACDYIFCNNLNNECPIIIIFGTLINENMCHRM
Ga0209454_106771943300027118Marine Gutless Worms SymbiontMSSPLYYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0209454_106780013300027118Marine Gutless Worms SymbiontMSDLXAYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETIC
Ga0209454_106797213300027118Marine Gutless Worms SymbiontMRIITHIRRIYTLSQKKACDYIFCNNLNNECPIIIIFGTLINETI
Ga0209454_107864323300027118Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETI
Ga0209454_108052613300027118Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICH
Ga0209454_108153013300027118Marine Gutless Worms SymbiontMNYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHR
Ga0209454_108171313300027118Marine Gutless Worms SymbiontMQLSCRALYTVSQKKACDYIFGNNLNNECPIIIIFGTLINETICHRMVVSFPTS
Ga0209454_109489513300027118Marine Gutless Worms SymbiontVIPGVYIYTVSQKKACDYIFCNNLNSECPIIIIFGTLINETIC
Ga0209454_111698823300027118Marine Gutless Worms SymbiontVSQKKACDYIFCNNLNNECPIIIIFGTLINETMCH
Ga0209454_111758213300027118Marine Gutless Worms SymbiontVTDAPRLAYYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICH
Ga0209146_100517513300027175Marine Gutless Worms SymbiontMLHDSFIYTVSQKKACDYIFCNNLNNECPIIIIFGTLI
Ga0209146_101829243300027175Marine Gutless Worms SymbiontMPYYYTVSQKKACDYIFCNNWNNECPIIIIFGTLI
Ga0209146_102292013300027175Marine Gutless Worms SymbiontMQKIQHYTVSQKKACDYIFCNNWNNECPIIIIFGTLI
Ga0209146_106099113300027175Marine Gutless Worms SymbiontMFSYIYTVSQKKHVTTFFCNNWNNECPIIIIFGTLINETICHRMVVSFP
Ga0209146_106460013300027175Marine Gutless Worms SymbiontMALVLYTVSQKKACDYIFCNNWNNECPIIIIFGTLIN
Ga0209146_109473923300027175Marine Gutless Worms SymbiontMSLYTVSQKKACDYIFGNNWNNECPIIIIFGTLIN
Ga0209146_111813013300027175Marine Gutless Worms SymbiontMQHNYTVSQKKACDYIFCNNLNNECPIIIIFGTLI
Ga0209146_112152713300027175Marine Gutless Worms SymbiontMRVKAKHDINYTVSQKKARDYIFCNNLNNECPIIIIFGTLINETICHRMVV
Ga0209146_112212313300027175Marine Gutless Worms SymbiontMRGGKCKIYTVSQKKACDYIFCNNWNNECPIIIIFGTLI
Ga0209146_112226313300027175Marine Gutless Worms SymbiontMIYTVSQKKACDYIFYNNWNNECPIIIIFGTLINETICHRMVVSFPTS
Ga0209146_114456613300027175Marine Gutless Worms SymbiontVIPGVYIYTVSQKKACDYIFCNNLNSECPIIIIFGTLINETICH
Ga0209146_118513013300027175Marine Gutless Worms SymbiontMLVITNYTVSQKKACDYIFCNNLNNECPIIIIFGTLI
Ga0209671_1003280143300027208Marine Gutless Worms SymbiontMLQLCNYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICH
Ga0209671_100541793300027208Marine Gutless Worms SymbiontMSDLXAYYTVSQKKACDYIFCNNLNNECPIIIIFGTLIN
Ga0209671_100620113300027208Marine Gutless Worms SymbiontMARMRMYTVSQKKACDYIFCNNLNNECPIIIIFGTFINENMCHQMVVS
Ga0209671_101194013300027208Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVVS
Ga0209671_101822883300027208Marine Gutless Worms SymbiontMNYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHR
Ga0209671_101996613300027208Marine Gutless Worms SymbiontMSSPLYYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVV
Ga0209671_103486113300027208Marine Gutless Worms SymbiontMILCIYTVSQKKACDYIFYNNWNNECPIIIIFGTLINETICHRMVVSFPTSSI
Ga0209671_103788113300027208Marine Gutless Worms SymbiontMQKIQHYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETI
Ga0209671_104216213300027208Marine Gutless Worms SymbiontMIYTVSQKKACDYIFCNNLNNECPIIIIFGTLINE
Ga0209671_104263843300027208Marine Gutless Worms SymbiontVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHRMVV
Ga0209671_104476313300027208Marine Gutless Worms SymbiontMLFFIYTVSQKKACDYIFGNNWNNECPIIIIFGTLINETICHRMVV
Ga0209671_105540413300027208Marine Gutless Worms SymbiontMRGGKCKIYTVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVVS
Ga0209671_105632513300027208Marine Gutless Worms SymbiontVSQKKACDYIFCNNWNNECPIIIIFGTLINETICHRMVVSFPTSSI
Ga0209671_106742713300027208Marine Gutless Worms SymbiontMNYYTVSQKKACDYIFCNNLNNECPIIIIFGTLINETICHRMVVSFHLIYLV
Ga0209671_107712113300027208Marine Gutless Worms SymbiontVIPGVYIYTVSQKKACDYIFCNNLNSECPIIIIFGTLINETICHRMVVS
Ga0209671_108960323300027208Marine Gutless Worms SymbiontMYTVSQKKACDYIFCNNLNYECPIIIIFGTLINETIC
Ga0209052_105476113300027338Marine Gutless Worms SymbiontMIIYTVSQKKTCDYIFCNNLNNKCPIIIIFGTLIS
Ga0209052_121365813300027338Marine Gutless Worms SymbiontMKLYTVSQKKTCDYIFCNNLNNKCPIIIIFGTLISETI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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