Metagenome Family F092867

Basic Information
Family ID	F092867
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	55 residues
Representative Sequence	CLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Number of Associated Samples	87
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	12.15 %
% of genes from short scaffolds (< 2000 bps)	11.21 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (91.589 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (75.701 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.262 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.32% β-sheet: 5.66% Coil/Unstructured: 83.02%
Feature Viewer

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Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF14090	HTH_39	0.93

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
All Organisms	root	All Organisms	8.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Viruses	superkingdom	All Organisms → Viruses	8.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	1.87 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Roseobacter phage CRP-2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-2	1.87 %
Zobellviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Roseobacter phage CRP-2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-2	1.87 %
Cobavirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.74 %
Roseobacter phage CRP-2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-2	1.87 %
Veravirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus	0.93 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005057\|Ga0068511_1000326	All Organisms → Viruses → Predicted Viral	3981	Open in IMG/M
3300007344\|Ga0070745_1303187	Not Available	568	Open in IMG/M
3300007539\|Ga0099849_1369660	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-2	507	Open in IMG/M
3300009428\|Ga0114915_1109211	Not Available	815	Open in IMG/M
3300017750\|Ga0181405_1037981	All Organisms → Viruses → Predicted Viral	1293	Open in IMG/M
3300017951\|Ga0181577_10211127	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1292	Open in IMG/M
3300017957\|Ga0181571_10408400	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-2	840	Open in IMG/M
3300017958\|Ga0181582_10343028	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus	966	Open in IMG/M
3300017962\|Ga0181581_10314231	All Organisms → Viruses → Predicted Viral	1003	Open in IMG/M
3300017985\|Ga0181576_10273077	All Organisms → Viruses → Predicted Viral	1083	Open in IMG/M
3300020055\|Ga0181575_10147147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1422	Open in IMG/M
3300022053\|Ga0212030_1020526	Not Available	889	Open in IMG/M
3300022074\|Ga0224906_1093037	Not Available	899	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.07%
Algae	Host-Associated → Algae	0.93%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	97.20%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Sediment	Environmental → Aquatic → Sediment	0.93%
Green Algae	Host-Associated → Algae → Green Algae	0.93%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	28.04%
Oceanic	Environmental → Aquatic → Marine → Oceanic	25.23%
Strait	Environmental → Aquatic → Marine → Strait	21.50%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.95%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.54%
River	Environmental → Aquatic → Freshwater → River	0.93%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	27.10%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	22.43%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	21.50%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	14.02%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.54%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.80%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.93%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	21.50%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	19.63%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	19.63%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	14.02%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.61%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.80%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.80%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.80%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	1.87%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.87%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.93%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.93%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%
Enviromental	Environmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental	0.93%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	0.93%
Methane Seep	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Methane Seep	0.93%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000425	Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2	Environmental	Open in IMG/M
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009492	Marine sediment microbial communities from Chincoteague Deepwater methane seep, US Atlantic Margin - Chincoteague Seep MUC-5 6-8 cmbsf	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022053	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022164	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)	Environmental	Open in IMG/M
3300023110	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300024335	Seawater microbial communities from Monterey Bay, California, United States - 90D	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300032136	Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P_2C_Liq_2_UnCtyDRAFT_10385641	3300000425	Enviromental	KECLAYRTNKDNKVVPLDTFKAMTRAEKKQEDFGHCGDCRACWSKDVANISYPRH*
BBAY92_100561211	3300000947	Macroalgal Surface	FKDMTREQKKEQDFGHCGDCRACWSKTVENISYPLH*
JGI24006J15134_100738235	3300001450	Marine	GHVNTSTVHRAGEEIHGKECLAYRTNKDAKVVDKVTFKAMTRPEKKEQDFGHCGDCRACWSKDVTNVSYPLH*
JGI24003J15210_101070454	3300001460	Marine	NTSTVHKHKETVHGKECLAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH*
JGI24003J15210_101502811	3300001460	Marine	PIKGHTNTSTVHKHKETVHGKECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH*
Ga0068511_10003261	3300005057	Marine Water	LAYRTNKENIVVDLETFKAMSRPEKKEQDFGHCGDCRACWSRDVANISYPLH*
Ga0068511_10960691	3300005057	Marine Water	KKPVHGKECLAYRTNKDNIVVDLETFKAMTKPEKKEQDFGHCGDCRACWSRDVANISYPLH*
Ga0075474_101855361	3300006025	Aqueous	VHRHGETVHGKECLAYRTNKDNKVIDHDTFAAMSKEQKKEQDFGHCGDCRACWSKDVPNISYPLH*
Ga0098038_11549291	3300006735	Marine	AYRTNKENIVVDLETFKAMTRPEKKDQDFGHCGDCRACWSKEVANISYPLH*
Ga0098037_12215271	3300006737	Marine	TNKENIVVDLETFKAMTRPEKKEQDFGHCGDCRACWSKEVANISYPLH*
Ga0098048_12209303	3300006752	Marine	FKAMTRPEKKEQDFGHCGDCRACWSKEVANISYPLH*
Ga0070754_101545641	3300006810	Aqueous	HVNTSTVHRHGETVHGKECLAYRTNKDNTVIDHDTFAAMSKEQKKEQDFGHCGNCRACWSKDVSNISYPLH*
Ga0075481_102444981	3300006868	Aqueous	VHGKECLAYRTNKDNTVIDHDTFAAMSKEQKKEQDFGHCGNCRACWSKDVSNISYPLH*
Ga0075479_104070101	3300006870	Aqueous	NVVIDLETFKAMTKPEKKEQDFGHCGDCRACWSKGVANISYPLH*
Ga0075475_101637195	3300006874	Aqueous	GHVNTSTVHRHGETVHGKECLAYRTNKDNTVIDHDTFAAMSKEQKKEQDFGHCGDCRACWSKDVSNISYPLH*
Ga0070750_104180661	3300006916	Aqueous	IAGHANTSTVHRKGETIHGKACLAYRTNKNAEVIEEQAFKDMTREQKKEQDFGHCGDCRACWSKTVDNISYPLH*
Ga0070750_104414861	3300006916	Aqueous	NVVIDLETFKAMSKPEKKAQDFGHCGDCRACWSKDVANISYPLH*
Ga0070746_105088741	3300006919	Aqueous	HRKGETIHGKACLAYRTNKNAEVIEEQAFKDMTREQKKEQDFGHCGDCRACWSKTVDNISYPLH*
Ga0075463_101017041	3300007236	Aqueous	KVIDHDTFASMSKEQKKEQDFGHCGDCRACWSKDVSNISYPLH*
Ga0070745_13031873	3300007344	Aqueous	GHVNTSTVHRHGETVHGKECLAYRTNKDNTVIDHDTFASMSKEQKKEQDFGHCGDCRACWSKDVPNISYPLH*
Ga0070753_13591831	3300007346	Aqueous	HKKGQEVHGKECLAYRTNKDAIVVDLDTFQAMGKAEKKEQDFGHCGNCRACWNPSVENISYPLH*
Ga0099849_11468211	3300007539	Aqueous	GDTVHGKECLAYRTNKDNVVIDYETFKAMTKPEKKEQDFGHCGDCRACWSKDVANISYPLH*
Ga0099849_13696601	3300007539	Aqueous	VHGKECLAYRTNKESIVVDLGTFKAMTREQKKEQDFGHCGDCRACWSKDVSNISYPLH*
Ga0102816_11461411	3300008999	Estuarine	LETFKAMSRADKKEQDFGHCGDCRACWSKDVANISYPLH*
Ga0114915_11092114	3300009428	Deep Ocean	EKIHGKECLAYRTNKDAKVVDKVTFKAMTRPEKKIQDFGHCGDCRACWNPTVHNVSYPLH
Ga0127412_100574882	3300009492	Methane Seep	NTSTVHRHGETVHGKECLAYRTNKDNTVIDHDTFASMSKDQKKEQDFGHCGDCRACWSKDVPNISYPLH*
Ga0115570_101941953	3300009496	Pelagic Marine	RKGEAIYGKECLAYRTNKDAKVIAKEVFEAMTRPEKKEQDFGHCGDCRACWSKEVTNISYPLH*
Ga0098043_10833601	3300010148	Marine	KENIVVDLETFKAMSRPEKKAQDFGHCGDCRACWSKDVANISYPLH*
Ga0098043_11756991	3300010148	Marine	TFKAMTRPEKKEQDFGHCGDCRACWSKEVSNISYPLH*
Ga0098049_11702843	3300010149	Marine	AYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH*
Ga0098059_11801501	3300010153	Marine	ECLAYRTNKENIVVDLETFKAMTRPEKKEQDFGHCGDCRACWSKEVANISYPLH*
Ga0129348_13170403	3300010296	Freshwater To Marine Saline Gradient	YRTNKDNVVIDYETFKAMTKPEKKEQDFGHCGDCRACWSKDVANISYPLH*
Ga0129348_13221462	3300010296	Freshwater To Marine Saline Gradient	KGHENTSTVHRKGEAIYGKECLAYRTKKDAKVIAKEVFEAMTRLEKKEQDFGHCGDCRACWSKEVENISYPLH*
Ga0129351_11930001	3300010300	Freshwater To Marine Saline Gradient	TVIDHDTFKAMSKAEKKEQDFGHCGDCRACWSKDVANISYPLH*
Ga0160423_109811751	3300012920	Surface Seawater	LAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH*
Ga0163109_112372511	3300012936	Surface Seawater	STVHKHKETVFGKECLAYRTNKENIVVDLETFKAMSRPEKKAQDFGHCGDCRACWSKDVANISYPLH*
Ga0163111_118434023	3300012954	Surface Seawater	KGHTHTSTVHKHKETVHGKECLAYRTNKDNIVVDLETFKAMSRPEKKAQDFGHCGDCRACWSKDVANISYPLH*
Ga0129327_101639984	3300013010	Freshwater To Marine Saline Gradient	VIAKEVFEAMTRLEKKEQDFGHCGDCRACWSKEVTNISYPLH*
Ga0180120_101440271	3300017697	Freshwater To Marine Saline Gradient	VHGKECLAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWFKEVANISYPLH
Ga0180120_104334741	3300017697	Freshwater To Marine Saline Gradient	HRKGEAIYGKECLAYRTNKDAKVIAKEVFEAMTRPEKKEQDFGHCGDCRACWSKEVTNISYPLH
Ga0181401_11000004	3300017727	Seawater	LETFKAMSRPDKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0181415_10838303	3300017732	Seawater	THTSTVHKHKETVHGKECLAYRTNKENIVVDLETFKAMSRPDKQEHDFGHCGDCRACWSKDVANISYPLH
Ga0187222_11207823	3300017734	Seawater	YRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181402_10796481	3300017743	Seawater	ENIVVDLETFKAMSRADKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0181392_12073671	3300017749	Seawater	KNAKVVSSEAFKVMTREEKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181405_10379811	3300017750	Seawater	HTHTSTVHKHKETVHGKECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181405_11195413	3300017750	Seawater	CLAYRTNKDFEVIAEKVFKNMTREQKKTEDFGHCGNCRACWSNDVENISYPLH
Ga0181400_10303081	3300017752	Seawater	TSTVHKHKETVHGKECLAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181411_10552871	3300017755	Seawater	KAMSRADKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0181414_10776141	3300017759	Seawater	KECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181410_10516913	3300017763	Seawater	IHGKECLAYRTNKDFEVIAEKVFKNMTREQKKTEDFGHCGNCRACWSNDVENISYPLH
Ga0181385_11379711	3300017764	Seawater	HKETVHGKECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0181406_10380811	3300017767	Seawater	NKNSEVIEAQAFKDMTREQKKEQDFGHCGDCRACWSKTVDNISYPLH
Ga0187221_11492384	3300017769	Seawater	TNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181425_11385831	3300017771	Seawater	RTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181394_11514921	3300017776	Seawater	TFKAMSRADKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0181394_12155612	3300017776	Seawater	GHANTSTVHRKGETIYGKACLAYRTNKNSKVIEEQAFKDMTREQKKEQDFGHCGDCRACWSKTVDNISYPLH
Ga0181394_12725252	3300017776	Seawater	LAYRTNKENIVVDLETFKAMSRADKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181395_11521821	3300017779	Seawater	HSHTSTVHKHKETVHGKECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181423_10576351	3300017781	Seawater	EVIEAQAFKDMTREQKKEQDFGHCGDCRACWSKTVENISYPLH
Ga0181423_12136531	3300017781	Seawater	GHKNTSTVHRKGETIHGKECLAYRTNKGFEVIAEKVFKNMTREQKKTEDFGHCGNCRACWSNDVENISYPLH
Ga0181584_107356581	3300017949	Salt Marsh	RTNKDNVVIDYETFKAMSKPEKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181577_102111271	3300017951	Salt Marsh	KAMTKPEKKAQDFGHCGDCRACWSKDIANISYPLH
Ga0181577_108720221	3300017951	Salt Marsh	CLAYRTNKDAIVVDLDTFQAMGKAEKKEQDFGHCGNCRACWNPTVENISYPLH
Ga0181571_104084001	3300017957	Salt Marsh	VHGKECLAYRTNKDNKVIDHDTFAAMSKEQKKEQDFGHCGDCRACWSKDVPNISYPLH
Ga0181582_103430284	3300017958	Salt Marsh	YRTNKDNVVIDLETFKAMTKPEKKEQDFGHCGDCRACWSKDIANISSPLH
Ga0181581_103142315	3300017962	Salt Marsh	IDLETFKAMTKPEKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0181590_104622422	3300017967	Salt Marsh	ETFKAMSKPEKKAQDFGHCGDCRACWSKDVANISYPLH
Ga0181576_102730774	3300017985	Salt Marsh	AYRTNKDNVVIDLETFKAMTKPEKKAQDFGHCGDCRACWSKDIANISYPLH
Ga0181553_101800821	3300018416	Salt Marsh	QAFKDMTREQKKEQDFGHCGDCRACWSKTVDNISYPLH
Ga0181592_105370653	3300018421	Salt Marsh	GHANTSTVHRHGDTVHGKECLAYRTNKDNVVIDYETFKAMSKPEKKEQDFGHCGDCRACWSKGVANISYPSH
Ga0181591_110562411	3300018424	Salt Marsh	YRTNKDNTVIDHATFAAMSKEQKKEQDFGHCGDCRACWSKDVSNISYPLH
Ga0181591_111208311	3300018424	Salt Marsh	TVHGKECLAYRTNKDNTVIDHATFAAMSKEQKKEQDFGHCGDCRACWSKDVPNISYPLH
Ga0194023_10932321	3300019756	Freshwater	RHGETVHGKECLAYRTNKDNTVIDHDTFAAMSKEQKKEQDFGHCGDCRACWSKDVSNISYPLH
Ga0181575_101471471	3300020055	Salt Marsh	LAYRTNKDNVVIDLETFKAMTKPEKKAQDFGHCGDCRACWSKDIANISYPLH
Ga0213858_105301803	3300021356	Seawater	VVDLETFKAMSKPEKKDQDFGHCGNCRACWSRDVANISYPLH
Ga0222716_106273173	3300021959	Estuarine Water	HGETVHGKECLAYRTNKDNTVIDHDTFAAMSKEQKKEQDFGHCGDCRACWSKDVSNISYPLH
Ga0222714_103970471	3300021961	Estuarine Water	HVNTSTVHRHGETVHGKECLAYRTNKDNTVIDHDTFASMSKDQKKEQDFGHCGDCRACWSKDVPNISYPLH
Ga0222719_107603721	3300021964	Estuarine Water	SGHVNTSTVHRHGETVHGKECLAYRTNKDSVVIDLGTFKAMTKEQKKQQDFGHCGDCRACWSKDIANISYPLH
Ga0212030_10205264	3300022053	Aqueous	VHKHKETVHGKECLAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWFKEVANISYPLH
Ga0224906_10930371	3300022074	Seawater	TSTVHKHKETVHGKECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0224906_11263901	3300022074	Seawater	CLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0212022_10640061	3300022164	Aqueous	ECLAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0255743_105669252	3300023110	Salt Marsh	RHGDTVHGKECLAYRTNKDNVVIDLETFKAMSKPEKKAQDFGHCGDCRACWSKDVANISYPLH
Ga0255768_101653331	3300023180	Salt Marsh	DTIQGKECLAYRTNKDNVVIDLETFKAMSKPEKKAQDFGHCGDCRACWSKDVANISYPLH
Ga0228672_10607455	3300024335	Seawater	RTNKDAKVVPSEAFKVMTREEKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0208157_10459526	3300025086	Marine	VVDLETFKAMTRPEKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0208666_10884714	3300025102	Marine	CLAYRTNKENIVVDLETFKAMSRPEKKAQDFGHCGDCRACWSKDVANISYPLH
Ga0208793_11686731	3300025108	Marine	AYRTNKDNIIVDLETFKAMTKPEKKVEDFGHCGDCKACWSKEIENISYPLH
Ga0209535_11855413	3300025120	Marine	SDAPIKGHTNTSTVHKHKETVHGKECLAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0209535_12161282	3300025120	Marine	GHTHTSTVHKHKETVHGKECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0209535_12181133	3300025120	Marine	LAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0209645_11213341	3300025151	Marine	FKAMSRPEKKQQDFGHCGDCRACWSKEVANISYPLH
Ga0209337_10545051	3300025168	Marine	VHRAGEEIHGKECLAYRTNKDAKVVDKVTFKAMTRPEKKEQDFGHCGDCRACWSKDVTNVSYPLH
Ga0209337_12294644	3300025168	Marine	ETVHGKECLAYRTNKENIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0209337_12776283	3300025168	Marine	TSTVHKHKETVHGKECLAYRTNKDNIVVDLETFKAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0209337_13228223	3300025168	Marine	KAMSRPDKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0208149_10900503	3300025610	Aqueous	VHRHGDTVHGKECLAYRTNKDNVVIDLETFKAMSKPEKKAQDFGHCGDCRACWSKDVANISYPLH
Ga0208428_11518251	3300025653	Aqueous	VHGKECLAYRTNKDNTVIDHDTFAAMSKEQKKEQDFGHCGDCRACWSKDVPNISYPLH
Ga0208150_12183641	3300025751	Aqueous	IDHDTFASMSKEQKKEQDFGHCGDCRACWSKDVPNISYPLH
Ga0208785_11070933	3300025815	Aqueous	YRTNKDNVVIDLETFKAMTKPEKKEQDFGHCGDCRACWSKDVANISYPLH
Ga0208785_11384753	3300025815	Aqueous	YRTNKDNTVIDHDTFAAMSKEQKKEQDFGHCGDCRACWSKDVSNISYPLH
Ga0208645_12622121	3300025853	Aqueous	KDNTVIDHDTFASMSKEQKKEQDFGHCGDCRACWSKDVPNISYPLH
Ga0183683_10545382	3300029309	Marine	PIKGHTHTSTVHKHKETVHGKECLAYRTNKENIVVDLETFKAMTRPEKKEQDFGHCGDCRACWSKEVANISYPLH
Ga0185543_10964991	3300029318	Marine	NIVVDLETFKAMSRPEKKAQDFGHCGDCRACWSKEVANISYPLH
Ga0183757_10425901	3300029787	Marine	VDLETFKAMTRPEKKDQDFGHCGDCRACWSKEVANISYPLH
Ga0316201_107070261	3300032136	Worm Burrow	YRTNKDNKVIDHDTFASMSKEQKKEQDFGHCGDCRACWSKDVSNISYPLH

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092867

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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