Metagenome Family F092987

Basic Information
Family ID	F092987
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	102 residues
Representative Sequence	MRWRLLLEEFGPKLACVKGANNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGCPLSYKEIAFRQKKDRALQNKFRTQPELHVKKPCAFSDSTYELIT
Number of Associated Samples	10
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	9
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (98.113 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat (99.057 % of family members)
Environment Ontology (ENVO)	Unclassified (99.057 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Surface (non-saline) (99.057 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.62% β-sheet: 0.00% Coil/Unstructured: 45.38%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00665	rve	8.49
PF00078	RVT_1	7.55
PF09337	zf-H2C2	4.72

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	8.49
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	8.49
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	8.49
COG4584	Transposase	Mobilome: prophages, transposons [X]	8.49

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
All Organisms	root	All Organisms	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
cellular organisms	root	All Organisms → cellular organisms	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.94 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Thiohalocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa	0.94 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
unclassified Thiohalocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa	0.94 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.11 %
Thiohalocapsa sp. PB-PSB1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa → Thiohalocapsa sp. PB-PSB1	0.94 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.94 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300020203\|Ga0163148_10027019	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	4434	Open in IMG/M
3300020596\|Ga0163149_10080772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiohalocapsa → unclassified Thiohalocapsa → Thiohalocapsa sp. PB-PSB1	2359	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.06%
Terrestrial	Environmental → Terrestrial	0.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.06%
Soil	Environmental → Terrestrial → Soil	0.94%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	99.06%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	99.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	99.06%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020180	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.SP4.G1	Environmental	Open in IMG/M
3300020192	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1	Environmental	Open in IMG/M
3300020201	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP9.P1	Environmental	Open in IMG/M
3300020203	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP7.P2	Environmental	Open in IMG/M
3300020219	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP7.G1	Environmental	Open in IMG/M
3300020596	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.G1	Environmental	Open in IMG/M
3300022222	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0163144_102090793	3300015360	Freshwater Microbial Mat	VNNIVADALSRLNIAEEEFSAEAFANELANEEEDFPTGHPLSYEEIAFRQKKDRALQNKFRVQPELHIKKPCAFSDSTCELITKNDKIHVPKS*
Ga0163144_103288491	3300015360	Freshwater Microbial Mat	TDHKNLVHKHFNTEPVVRWRLLLEEFGPKLTCVKGVNNIVADALSRLEIAEEEFSAKAFANELMNEEEEFPMGHPLSYKEIAFRQTKDRALQNKFRMQPELCVKKPHTFSDSTHELIAKNDKILRS*
Ga0163144_104709971	3300015360	Freshwater Microbial Mat	MRWRLLPEEFGRKLTYVKGVNNIVADALSRLEIAEEEFSAEAFTNELANEEEEFPTGCPLSYKEIAFRQKKDRALQNKFRMQPKLYIKKPYAFSDSV*
Ga0163144_105033592	3300015360	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGAKNIVADALSRLEIAEEEFSTEAFTNELANGEEDFPTGHPLSHKEIAFRQMKDRALQNKFRTDATQTVCQEAVCFLR*
Ga0163144_106261132	3300015360	Freshwater Microbial Mat	VCQGREQCTVVADALSRLETTEEELSAKAFANELANKEADFPTGYPLSYKEIAFRQKKDRALQNKFRTQPELHVKKPCAFSD
Ga0163144_107099062	3300015360	Freshwater Microbial Mat	MRWRLLSEEFGPKLTHIKGVNNTVADALSRLEIEEEEFSADAFTNELANEEEEFPTGYPFSCKEIAFHQKKDRGLQNKLRTQPEPCVKKPCIFSDRGCSITRRKADSFL*
Ga0163144_107154331	3300015360	Freshwater Microbial Mat	VNNIVADAISRLDIAEEEFSAKAFANELANEEEEFPTGCHLSYKEIVFRQTKDRALQNKFRTQPELYVKKP
Ga0163144_107889202	3300015360	Freshwater Microbial Mat	YVKGVNNIVADALSRLEIAEEEFSAEAFANELANGEEDFPTGCPLSYKEIEFRQKKDRALQNKFRTQPKLYIKKPYAFSDSAYELIAKSNKIYVPKSLQHKCAEWYHTIT*
Ga0163144_107929871	3300015360	Freshwater Microbial Mat	KNPVCKHFNTERVMRWRLLLEELGPKLTHVKGANNIVADALSRLEMAEEEFSAEAFANELANEEEEFPTGCPLSCEEIAFRQTKDRALQNKFRTQPEL*
Ga0163144_109059411	3300015360	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGVNNIVDDALSRLEIAEEEFSAEAFANELANEEEEFRTGYPLSCKEIAFCQKKDSALQNKFRTQPELYIKKPCMFSDSMYELIAKNDKIYVPKHLQNKCA
Ga0163144_111191092	3300015360	Freshwater Microbial Mat	MYKHFNMEQVMHWRLLLEEFGPKLMYVKDANNIVADALSRLEIAEEEFSVKAFTNELANEEEEFPTGYPLSYKDIAFRQTKDRALQNKFRTQPELYIKKPYY*
Ga0163144_112176082	3300015360	Freshwater Microbial Mat	VYKHFNAERVMPWRLLLEEFGPKLTYVKGVNNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQKKGRALQNKFRTQPELYIKKPYAFSDSTYELITKNDKIYVPKS
Ga0163144_112804081	3300015360	Freshwater Microbial Mat	MCWRLLLEEFGPKSTYAKGVNNIVADALSRLDIAEEEFSAEAFANEVVNEEEDVPTGYPLSYKELAFHQEKDKALQNKFRTESELY
Ga0163144_113008982	3300015360	Freshwater Microbial Mat	MRWRLLLEEFGPKLTYVKGANNIVADALSRLEMAEEEFSAEAFTNELANEEEEFPTGYSLSYKEIAFRQTKDRALQNKFRTQP
Ga0163144_113459781	3300015360	Freshwater Microbial Mat	VNNTVADALSRLEIAEEEISAEAFANELANEEEEFPTGYPLSYKEIAFCQTKDRALQNKFRTQPELHVKKPYTFSDSTYELITKNDKIYVPKD*
Ga0163144_114330071	3300015360	Freshwater Microbial Mat	VNNIVADALSRLEIAEEEFSAEAFANELANGEEDFPTNYPLSYKEIEFRQKKDRALQNKFRTQPELYIKKPYAFSDSTYELITKNEKIYVPKSLQHKCAKW*
Ga0163144_114516511	3300015360	Freshwater Microbial Mat	LEEFGPKLTHLKGTNNIIADALSRLDIAEEEFSAEAFANELANEEEEFPTGHPLSHGEIAFCQKKDRALQNKFRMQPKLYIK
Ga0163144_114733741	3300015360	Freshwater Microbial Mat	AETLKEHRNMLLGQQIELFTNHKNLVHKHFNTERVARWRLLLEEFGPELTCVKGANNVVTDALSRLEIAEEELSAKAFANELANEEEDFPTGHPLSYKEMAFRQKKDRALQNKFRTQPELHIRKPHTFSDSTCELIAKNDKICVPKSLQHKCAE*
Ga0163144_116443611	3300015360	Freshwater Microbial Mat	HVKGSNNIVADALSRLETAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQDKDEALQNKFWTESELYIKKPHTFSDHAYELITKNDKIYVPKDLQKKCAEWCY*
Ga0163144_116735701	3300015360	Freshwater Microbial Mat	MNNIVADALSRLEIAEEEFSAKAFANELANEEEEFPTGYSLSYKETAFRQKKDRALQNKLRTQPELHIKKPFTFSDSTYKLITKNNKIYVPRCLQHKQVCRMVSLNVNASW*
Ga0163151_101662413	3300020057	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGSNNIVADALSRLEMAEEEFSAEAFANELANEEEEFPTGYPLSYKETAFRQKKDRALQNKFRTEPELYIKKPYTFSDSTYEL
Ga0163151_102185972	3300020057	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGAKNIVADALSRLEIAEEEFSTEAFTNELANGEEDFPTGHPLSHKEIAFRQMKDRALQNKFRTDATQTVCQEAVCFLR
Ga0163151_102294672	3300020057	Freshwater Microbial Mat	MYIKGSNNIVADALSRLEIAEEEFSEEAFAGELANEEEEFPTGYPLSYKEIACRQKKDRALQNKFRTEPELYVKKPHTFPDSTYKLITKNDKIY
Ga0163151_102305261	3300020057	Freshwater Microbial Mat	LEELGPKLTHVKGANNIVADALSRLEMAEEEFSAEAFANELANEEEEFPTGCPLSCEEKAFRQTNDRVLQNKFRTQPEL
Ga0163151_102648591	3300020057	Freshwater Microbial Mat	VLATPPRSVNNTVADALSRLEIAEEEISAEAFANELANEEEEFPTGYPLSYKEIAFCQTKDRALQNKFRTQPELHVKKPYTFSDSTYELITKNDKIYVPKD
Ga0163151_103572561	3300020057	Freshwater Microbial Mat	MRWRLLLEEFDPKLTHVKGANDTVADALSRLEIAEEELSAEAFASELGNEEEDFPTGCPLSCKETAFCQKKDRALQNKFRTQPELCVKKPHAFSDSTHELIAK
Ga0163151_104244391	3300020057	Freshwater Microbial Mat	VRWRLLLEEFGPELTCVKGVNDIVADAFSRLEMAEEELSAKAFANELANEEEDFPTGCPLSHEEIAFRQKKDRAPQTIRKSSETSLHLHS
Ga0163151_104288191	3300020057	Freshwater Microbial Mat	IKVVNNIVADALSRLNIAEEEFSAEAFANELANEEEDFPTGHPLSYEEIAFRQKKDRALQNKFRVQPELHIKKPCAFSDSTCELITKNDKIHVPKS
Ga0163151_104984722	3300020057	Freshwater Microbial Mat	VNNIVADALSRLDIAEEEFSAEAFTNELANEEEEFPTRHSLSCKETAFCQKKDRALQNKFRMQPKLYIKKPHIFSDSTYELIAKNDKIYVPKCLQ
Ga0163151_106073321	3300020057	Freshwater Microbial Mat	LSTPRVLEEFGPKLTCVKGANNIVADALSRLEIAEEELSAKAFANELANEEEDFPTGCPLSYKETAFRQKKDRALQNKFRTQPELHIKKPHAFSD
Ga0163155_104082081	3300020180	Freshwater Microbial Mat	MRWRLLPEEFGRKLTYVKGVNNIVADALSRLEIAEEEFSAEAFTNELANEEEEFPTGCPLSYKEIAFRQKKDRALQNKFRMQPKLYIKKPYAFSDSV
Ga0163155_104676521	3300020180	Freshwater Microbial Mat	GLNNIVADALSRLEIAEEAFSAEAFANELANEEDEFPTGYPLSYKEIAFHQKKDRALQNEFRTEPELYIKKPYTFSDSAYELITKNDKIYVFKALQQKVCQMVSLNVDAPW
Ga0163147_100474252	3300020192	Freshwater Microbial Mat	MRWRLLPEEFGRKLTYVKGVNNIVADALSRLEIAEEEFSAEAFTNELANEEEEFPTGYPLSYKEIAFRQKKDRALQNKFRMQPKLYIKKPYAFSDSV
Ga0163147_100902592	3300020192	Freshwater Microbial Mat	MCMRQWPSDELQTKLTYVKGVNNTVADALSRLKIAEEEFSAEAFANELANEEEEFPTGCPLSYKEIAFCQTKDRALQSKFQKQPELYVKKPYTFSDSTYELITKNDKI
Ga0163147_101208971	3300020192	Freshwater Microbial Mat	MRWRLLLEEFGPKLTCVKGMNNIVADALSRLEKAEEEFSAKAFANVRANEEEEFPMGYPLSYKERAFRQKEDRVLQNKLRKQPELH
Ga0163147_101527111	3300020192	Freshwater Microbial Mat	MLWRLLLEEFGPKLTYIKGVNNIVADALSRLEIAEEKFSAEAFANELVNEEEEFPTGYPLSYKEIAFRQTKDRALQNKFRTQPELYVKKPYIFLNSTYELITKNDKIYVPRYL
Ga0163147_101912421	3300020192	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGVNNIVDDALSRLEIAEEEFSAEAFANELANEEEEFRTGYPLSCKEIAFCQKKDSALQNKFRTQPELYIKKPCMFSDSMYELIAKNDKIYVPKHLQNKCAE
Ga0163147_102089511	3300020192	Freshwater Microbial Mat	MRWRLHLEEFGPKLTYVKGTNNVVADALSGLEIAEKELSAEAFANELANEEEDFPTGYPLSYEEIAFRQKKDRAPQNKFRTQPALCIKKP
Ga0163147_102524282	3300020192	Freshwater Microbial Mat	NNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGHPLSYEETTFRQKKDRALQNKFRTQPKLHVKKPHAFSDITHKLITKNDKIYVPKSLQHKCAEW
Ga0163147_103707382	3300020192	Freshwater Microbial Mat	MERVVHWRLLLEEFGPKLSHVKGANNIVADALSRPEIAEEEFSAKAFANELANEGEEFPTGCPLSCEETAFRQTKDRAPQNKFRTFPKLHIKRPHTFSDGVHELIAKNNEIYVP
Ga0163147_104494131	3300020192	Freshwater Microbial Mat	VLATPPRSVNNTVADALSRLEIAEEEISAEAFANELANEEEEFPTGYPLSYKEIAFCQTKDRALQNKFRTQPELHVKK
Ga0163147_104906201	3300020192	Freshwater Microbial Mat	MLLGQQIEVLTDHKSPANKHFNTERVMHWRLLPEEFGPKLMHVKGVNDIVADALSGLKTAEEELSAEAFTNELANEEEDFPTLSCEEMAFCQKKDRAPQNKFRTQPEPHVEKPHAFSDGTHELIAAKNDKICVPKSLQHKMCRVVSLDLNASW
Ga0163147_105096891	3300020192	Freshwater Microbial Mat	SNNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQEKDKALQTKFRTESELYIKKPYAFSDKTYELITKNDKIYVPKDLQQKCAE
Ga0163147_105429421	3300020192	Freshwater Microbial Mat	MRWRLLLEEFGHKLTYVKGVNNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQKKDRALQNKFRTQPE
Ga0163154_101576121	3300020201	Freshwater Microbial Mat	VNNIVADALSRLEIAEEEFSAEAFANELANGEEDFPTNYPLSYKEIEFRQKKDRALQNKFRTQPELYIKKPYAFSDSTYELITKNEKIYVPKSLQHKCAKW
Ga0163154_101864681	3300020201	Freshwater Microbial Mat	VQAFQHGTSYVLATPPRSVNNTVADALSRLEIAEEEISAEAFANELANEEEEFPTGYPLSYKEIAFCQTKDRALQNKFRTQPELHVKKPYTFSDSTYELITKNDKIYVPKD
Ga0163154_103502771	3300020201	Freshwater Microbial Mat	MRWRLLLEEFGPKLTYVKGANNIVADALSRLEMAEEEFSAEAFTNELANEEEEFPTGYSLSYKEIAFRQTKDRALQNKFRTQPELYIK
Ga0163154_103855222	3300020201	Freshwater Microbial Mat	MRWRLLLEEFGPKLTCVKGPNNIVADALSRLEIAEEEISAEVFANELANEEEEFPTGHPLSYKEIAFRQTKDRALQNKFR
Ga0163148_100270193	3300020203	Freshwater Microbial Mat	VNNIVADALSRLEIAEEEFSAEAFANELANGEEDFPTGCPLSYKEIEFRQKKDRALQNKFRTQPKLYIKKPYAFSDSAYELIAKSNKIYVPKSLQHKCAEWYHTIT
Ga0163148_100353742	3300020203	Freshwater Microbial Mat	MRWRLLSEELGPKLMHIKGVNNTVADALSRLEIEEEEFSADAFTNELANEEEEFPTGHPFSCKEIAFHQKKDRGLQNKLRTQPEPYVKKPCIFSDRGCSITRRKADSFL
Ga0163148_100381315	3300020203	Freshwater Microbial Mat	MRWRLLLEEFGPTLMCVKGSNNIIADALSRLEKAEEEFSAEAFANELANEEEEFPTGYPLSYKEIAFRQTKDRALQNKFRTQPQLHVKKPYTFSDSTYELITKNNKIYVPKYSQHK
Ga0163148_100405391	3300020203	Freshwater Microbial Mat	LSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRHEKDKALQTKFRTESELYIKKPYAFSDKTYELITKNDKIYVPKDLQQKCAE
Ga0163148_100584431	3300020203	Freshwater Microbial Mat	EDFYAEAFTNELANGEEDFPTGCRLSHKQTEFRQKKDRALQNKFRTQLEPHIKKPCAFSDSAHELIAENDKIYVPKSIQHKCVEWCH
Ga0163148_101173852	3300020203	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKDANNTVADALSRLETAEEELSAEAFANELANEEEDFPKGCPLSCEEMAFHQKKDRALQNKFTTQPELCVKKPCAFSDGTCELVAKNDKICVPKSLQHKCADKRLPMQ
Ga0163148_101213371	3300020203	Freshwater Microbial Mat	LGSNNIVADALSRLEIAEEEFSAEAFANELANEEEEFPTGYHLSYKEIAFRQKKDRALQNKFRTEPELYIKKPYTFSNSTYELITKNDKIYVPKALQQKCAEWYHLTSLDIPGLQKLLWTRDQ
Ga0163148_101453671	3300020203	Freshwater Microbial Mat	MCMRQWPSDELQTKLTYVKGVNNTVADALSRLKIAEEEFSAEAFANELANEEEEFPTGCPLSYKEIAFCQTKDRALQSKFQNQPELYVKKPYTFSDSTYELITKNDKI
Ga0163148_101798962	3300020203	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGANNIVADALSRLEMAEEEFSAEAFPNELANGEEDFPTGHPLSYKEIECRQKKDRALQ
Ga0163148_101960322	3300020203	Freshwater Microbial Mat	GVKGVNNIVADALSRLDIAEEEFSAEAFANELANEEEEFPTGCPLSYKEIAFRQTKDRALQNKFRTQPDLHIKKTHTFSDSAHELITKNDKELCS
Ga0163148_101995313	3300020203	Freshwater Microbial Mat	VQTFQHGAIMRWRLLLEEFGPKLTHVKGSNNIVADALSRLEMAEEEFSAEAFANELANEEEEFPTGYPLSYKETAFRQKKDRALQNKFRTEPELYIKKPYTFSDSTYEL
Ga0163148_102558651	3300020203	Freshwater Microbial Mat	MRWRLLLEELGPKLTHVKGANNIVADALSRLEMAEEEFSAEAFANELANEEEEFPTGCPLSCEEKAFRQTND
Ga0163148_103183152	3300020203	Freshwater Microbial Mat	LFNTERVVRWRLLLEEFGPKLTCVKGTNNIVVDALSRLEIAEEELSAEAFANELPNEEEDFPTGHPLSCKETAFRQKKDRALQNKFRTQPEPHVKKPCAFSDSTCELIAKNDKICVPKSLQHKCRMVSLNVNAPW
Ga0163148_103440272	3300020203	Freshwater Microbial Mat	VQALQCRRVVHWRLLLEEFGPKLTHVKGANSIVADALSRLEMAEEELSAEALANELANDEEDFPTGHPLSCKETAFHQKKDRALQNKFRTQPELHIKKPHAFSDGTCELVTKKDKICVPESLQHK
Ga0163148_103520312	3300020203	Freshwater Microbial Mat	MLLGQQIEVFADHKNPVHKHFNAERVVRWRLLLEEFGPKLTHVKGANDAVADALSRLKMAEEELSAEAFANELANEEEDFPTGHPLSCEETAFRQKKDRALQNKFRMQPELHVKKPHAFSDSTCELITKNDKICVPK
Ga0163148_103617641	3300020203	Freshwater Microbial Mat	MHWRLLLEEFGLKLTYVKGTNNVVADALSRLEIAEEELSAEAFANELANEEADFPTGCPLSYKEIAFRQKKDRALQNKFRMQPELCVKKPHAFSD
Ga0163148_103860052	3300020203	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGAKNIVADALSRLEIAEEEFSTEAFTNELANGEEDFPTGHPLSHKEIAFRQMKD
Ga0163148_104012002	3300020203	Freshwater Microbial Mat	MRWRLVLEEFGPKLTYVNNIVADALSRLEIAEEEFSAEAFANELANGEQDFPTNYHLSYKEIEFRQKKDRALQNKFRTQAKLYIKKPYAFSDSTYELITKNDKIYVPKFLQHKCA
Ga0163148_104124571	3300020203	Freshwater Microbial Mat	RLLLEEFGPKLTHVKGANDTVADALSRLETAEEELSAEAFANELANEEEDFPTGCPLSCKEIAFRQKKDRALQN
Ga0163148_104365681	3300020203	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVMGVNNNVADALSXLKIAEEELSAEAFANKLANEEEDFPTGCPLSYKEIAFRQKKDRALQNKFKTQPELYIKKPYTFSDSTYELIAKKDKIYVPKSLQH
Ga0163148_105131401	3300020203	Freshwater Microbial Mat	VRWRLLLEEFGPELTCVKGVNDIVADAFSRLKIAEEELSAKAFANELANEEEDFPTGCPLSHEETAFRQKKDRAPQNKFRTQ
Ga0163148_105165332	3300020203	Freshwater Microbial Mat	LTYAKGANNIVADALSRLEIAEEEFSAKGFTNELANEEEEFPTGYPLSYKEIAFRQTKDRALQNKFRIQPELHIKMPHTFSDSTCELIAKNDKIYV
Ga0163148_105404562	3300020203	Freshwater Microbial Mat	LATPSAVEEFGPELTHVKGANNIVADALSGLEIAEEELSAEAFANELANEEEDFPTGYPLSHKEIAFRQKKDRALQNKFRTQPALCI
Ga0163148_105549381	3300020203	Freshwater Microbial Mat	MTVMLATVADALSRLEIAEEEFSVEAFANELANEEEDFPTGCPLFCKEIAFRQKKDRALQNKFRTQPELHVKKPHAFSDSTCELITKNDKIYVPKLLQHKCAEWYLPCATASMHKR
Ga0163146_101269051	3300020219	Freshwater Microbial Mat	LATPSAVEEFGPELTHVKGANNIVADALSGLEIAEEELSAEAFANELANEEEDFPTGYPLSHKEIAFRQKKDRALQNKFRTQPELCIKKPCAFSDST
Ga0163146_102184863	3300020219	Freshwater Microbial Mat	MRWRLLLEEFGPKLTYVKGANNIVADALSRLEMAEEEFSAEAFTNELANEEEEFPTGYSLSYKEIAFRQTKDRALQNKFRTQPELYIKKLYTFSDSMYELITKNDKIYVPKYLQPKCAE
Ga0163146_102458582	3300020219	Freshwater Microbial Mat	VNNIVADALSRLEIAEEEFSAEAFANELANGEEDFPTGYPLSYKEIEFRQKKDRALQNKFRTQPKLYIKKPYAFSDSAYELIAKSNKIYVPKSLQHKCAEWYHTIT
Ga0163146_103675541	3300020219	Freshwater Microbial Mat	MRWGLLPEEFGPKLTHVKGANNVVADALSRLETAEEELSAEAFTNELANDEEDFPTGCPLSCKETAFRQKKDRAPQNKFRTQPELSVEKLHAFSDSTCELIAKNDKICVPKSSQHK
Ga0163146_103937681	3300020219	Freshwater Microbial Mat	GANNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQKKDRALQNKFRTQPELHIKKPYAFSDSTYELITKNDKIYVPKSLQHKCAEWYHLMILTKR
Ga0163146_104566161	3300020219	Freshwater Microbial Mat	MGWRLLLGEFGPKLMHVKGVNNIVADALSRLDLAEEEFSAEAFTNELANEEEEFPTGYPLCCKEIAFRQKKDRALQNKFRTQPELYIE
Ga0163146_104800801	3300020219	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGANNTVADALSRLETAEEELSAEAFANELANEEEDFPTGCPLSCEETAFRQKKDRALQNKFRTQPELHVKKPHTFSD
Ga0163146_105421841	3300020219	Freshwater Microbial Mat	MRWRLLLEEFGPKLTCVKGANDTVADALSRLETAEEELSAEAFANELANEEGDFPTGCPLSYKETAFRQKKDRALQNKFRTQPELCVKKLCAFSDGTCELVTKNDKICVPKSLQH
Ga0163146_105867731	3300020219	Freshwater Microbial Mat	LEESGPKLTRVKGANNIATDALSRLEFSAEAFANELANEEEEFPTGCPLSCGEMAFRQKKDRALQKKLRTQPELDIKKPCIFSDS
Ga0163149_100173747	3300020596	Freshwater Microbial Mat	MRRRLLLEEFCPKLTCVKGANNIVADALSRLEIAEEELSAKAFANELANEEEDFPTGYPFSYKELAFRQKKDRALQNKFRTQPDGTTC
Ga0163149_100589553	3300020596	Freshwater Microbial Mat	VNNIVADALSRLNIAEEEFSAEAFANELANEEEDFPTGHPLSYEEIAFRQKKDRALQNKFRVQPELHIKKPCAFSDSTCELITKNDKIHVPKS
Ga0163149_100791825	3300020596	Freshwater Microbial Mat	VNNIVADALSRLKTAEEEFSAKAFANELANEEEEFPMGCPLSCKEMAFRQKKDRALQNKFRMQPELHIKKPCAFSDSTCELIAKNDKIHVPESLQHKCAEWHH
Ga0163149_100807722	3300020596	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGAKNIVADALSRLEIAEEEFSTEAFTNELANGEEDFPTGHPLSHKEIAFRQKKDRALQNKFRTDATQTVCQEAVCFLR
Ga0163149_100837761	3300020596	Freshwater Microbial Mat	TEPVVRWRLLLEEFGPKLTCVKGVNNIVADALSRLEIAEEEFSAKAFANELMNEEEEFPMGHPLSYKEIAFRQTKDRALQNKFRMQPELCVKKPHTFSDSTHELIAKNDKILRS
Ga0163149_101180561	3300020596	Freshwater Microbial Mat	VNNIVADALSRLDIAEEEFSAEAFANELANEEEEFPTGCPLSYKEIAFCQTKDRALQNKFRTQPDLHIKKTHTFSDSAHKLITKN
Ga0163149_101559783	3300020596	Freshwater Microbial Mat	VNNIVADALSRLEIAEEEFSAEAFANELANGEEDFPTGYPLSYKEIEFRQKKDRALQNKFRTQPKLYIKKPYAFSDSAYELIAKSNKIYVPKSLQHK
Ga0163149_101796802	3300020596	Freshwater Microbial Mat	MRWRLLSEELGPKLMHIKGVNNTVADALSRLEIEEEEFSADAFTNELANEEEEFPTGYPFSCKEIAFHQKKDRGLQNKLRTQPEPYVKKPCIFSDRGCSITRRKADSFL
Ga0163149_103209522	3300020596	Freshwater Microbial Mat	PKLTHVKGANNIVADALSRLEIAEEELSAKAFANELANEEEGFPTGCPLSHKEIAFRQKKDRALQNKFRTQPELHIKKPHAFSDSTCELITKNDKICVPKSLQHKCAEWCH
Ga0163149_103404691	3300020596	Freshwater Microbial Mat	HKNLVHKHFNAERVMRWRLLLEEFGPKLTCVKGANNAVADALSRLEMAEEELSAEAFANELANEEEDFPTGHPLSCEETAFRQKKDRALQNKFRTQPELHIKKPHAFSDGTHELVTKNDKICVPKSLQHKCAE
Ga0163149_104149762	3300020596	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGANNVVADALSRLEIAEEELSAEAFANELANEEEDFPTGCPLSYKETAFRQKKDRALQNKFRTQPELCVKKPCAFS
Ga0163149_104183492	3300020596	Freshwater Microbial Mat	TYVKGSNNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQEKDKALQTKFRTESELYIKKPYAFSDKTYELITKNDKIYVPKDLQQKCAE
Ga0163149_104364001	3300020596	Freshwater Microbial Mat	MRWRLVLEEFGPKLTYVNNIVADALSRLEIAEEEFSAEAFANELANGEQDFPTNYHLSYKEIEFRQKKDRALQNKFRTQAKLYIKKPYAFSDSTYELITKNDKIYVPKFLQHKCAKWYHL
Ga0163149_104644642	3300020596	Freshwater Microbial Mat	DIVADALSRLETAEEELSAEAFANELANEEEDFPTGHPLSYKETAFRQKKDRALQNKFRTQPELHIEKPCAFSDGTCELITKND
Ga0163149_104836781	3300020596	Freshwater Microbial Mat	MRWRLLLEEFGPKLTYVKGVNNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSHKEIAFRQKKDRALQNKFRTEPELY
Ga0163149_105381481	3300020596	Freshwater Microbial Mat	MRWRLLLEEFGPKLTHVKGANNVVTDALSRLEIAEEELSAEAFANELANDEEDFPTGYPLSYKEIAFRQKKDRALQNKFRTQPELHVKKPCAFSDSTY
Ga0163149_105496311	3300020596	Freshwater Microbial Mat	VNNIVTDALRRREIAEEELSAKAFANELANEEEGFPTGYPLSYKEIAFCQKKDRAPQNKFRTQPELYIKKPYAFSDSTHELITKNDKIY
Ga0163149_105699531	3300020596	Freshwater Microbial Mat	MRWRLLLEEFGPKLACVKGANNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGCPLSYKEIAFRQKKDRALQNKFRTQPELHVKKPCAFSDSTYELIT
Ga0163149_105799121	3300020596	Freshwater Microbial Mat	MRWRLLLEEFGPKLTCVKGANNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGCPLSYKEIAFRQKKDRALQNKFRTQPELC
Ga0163149_105917641	3300020596	Freshwater Microbial Mat	VKGANNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQKKDRALQNKFRTQPELHIKKPCAFSDSTCELIAKNDKIYVPKSLQHKCA
Ga0226658_103152991	3300022222	Freshwater Microbial Mat	RWRLLLEEFGPKLTCVKGVNNIVADALSRLEIAEEEFSAKAFANELMNEEEEFPMGHPLSYKEIAFRQTKDRALQNKFRMQPELCVKKPHTFSDSTHELIAKNDKILRS
Ga0226658_103251391	3300022222	Freshwater Microbial Mat	FNTERVMRWQLLLEEFGPKLTCVKGANNIIADALSRLDITEEEFSAKAFANELANEEEEFPTGYPLSYREIAFRQKKDRALQNKRRTQPELYVKKPHIFSDSAYKLIAKNNKIYVPDPTHRTESIPTERCPLKQRTLQ
Ga0226658_104634731	3300022222	Freshwater Microbial Mat	MRWRLLLEEFGPKLTYVKGANNIVADALSRLEMAEEEFSAEAFTNELANEEEEFPTGYSLSYKEIAFRQTKDRALQNKFRTQPELYIKKLYTFSDSMYELITKNDKIYVPKYF
Ga0226658_105323532	3300022222	Freshwater Microbial Mat	MRWGLLPEEFGPKLTHVKGANNVVADALSRLETAEEELSAEAFTNELANDEEDFPTGCPLSCKETAFRQKKDRAPQNKFRTQPELSVEKLHAFSDSTCELIAKNDKICV
Ga0316629_107084042	3300033483	Soil	WRLLLEEFGPKLTYVKGANNIVADALSRLEIAEEELSAEAFANELANEEEDFPTGYPLSYKEIAFRQKKDRALQNKFRTQPELHIKKPYAFSDSTYELITKNDKIYCTFLSRCNISVPNGTT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092987

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences