Metagenome Family F093007

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093007
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	42 residues
Representative Sequence	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMAQNEDITMQ
Number of Associated Samples	25
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.67 %
% of genes near scaffold ends (potentially truncated)	1.89 %
% of genes from short scaffolds (< 2000 bps)	2.83 %
Associated GOLD sequencing projects	25
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (90.566 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens (84.906 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Fungus → Fungus corpus (84.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.13% β-sheet: 0.00% Coil/Unstructured: 60.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00078	RVT_1	7.55
PF00385	Chromo	3.77
PF00665	rve	2.83
PF07727	RVT_2	0.94
PF08284	RVP_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	2.83
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	2.83
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	2.83
COG4584	Transposase	Mobilome: prophages, transposons [X]	2.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
All Organisms	root	All Organisms	9.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
cellular organisms	root	All Organisms → cellular organisms	7.55 %
Viruses	superkingdom	All Organisms → Viruses	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	7.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	7.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	7.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	7.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Basidiomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	7.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina	3.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	3.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae	2.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	2.83 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricus bisporus	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.57 %
Agaricus bisporus var. burnettii	varietas	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus → Agaricus bisporus var. burnettii	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300011394\|Ga0153970_1006300	All Organisms → Viruses → Predicted Viral	2435	Open in IMG/M
3300011394\|Ga0153970_1030767	Not Available	910	Open in IMG/M
3300011401\|Ga0153984_1010590	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes	2030	Open in IMG/M
3300012054\|Ga0154007_1000400	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	7871	Open in IMG/M
3300012054\|Ga0154007_1002592	All Organisms → Viruses → Predicted Viral	4047	Open in IMG/M
3300012054\|Ga0154007_1004786	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	2964	Open in IMG/M
3300012054\|Ga0154007_1015221	Not Available	1326	Open in IMG/M
3300012069\|Ga0153965_1000836	Not Available	7543	Open in IMG/M
3300012069\|Ga0153965_1000837	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus → Agaricus bisporus var. burnettii	7540	Open in IMG/M
3300012083\|Ga0154000_1003290	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales	4723	Open in IMG/M
3300012139\|Ga0153961_1001300	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	6207	Open in IMG/M
3300012141\|Ga0153958_1001959	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota → Agaricomycotina → Agaricomycetes → Agaricomycetidae → Agaricales → Agaricaceae → Agaricus → Agaricus bisporus → Agaricus bisporus var. burnettii	5798	Open in IMG/M
3300012144\|Ga0153996_1001987	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Basidiomycota	7884	Open in IMG/M
3300012995\|Ga0157361_1007463	Not Available	2850	Open in IMG/M
3300012995\|Ga0157361_1016546	Not Available	1635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Fungi	Host-Associated → Fungi	100.00%

Habitat	Taxonomy	Distribution
Mycelium	Host-Associated → Fungi → Mycelium	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	84.91%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	15.09%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300011394	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA054 MetaG	Host-Associated	Open in IMG/M
3300011396	Attine ant fungus gardens microbial communities from Florida, USA - TSFL044 MetaG	Host-Associated	Open in IMG/M
3300011401	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA068 MetaG	Host-Associated	Open in IMG/M
3300012054	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC091 MetaG	Host-Associated	Open in IMG/M
3300012057	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC079 MetaG	Host-Associated	Open in IMG/M
3300012059	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC075 MetaG	Host-Associated	Open in IMG/M
3300012069	Attine ant fungus gardens microbial communities from Florida, USA - TSFL049 MetaG	Host-Associated	Open in IMG/M
3300012070	Attine ant fungus gardens microbial communities from Florida, USA - TSFL047 MetaG	Host-Associated	Open in IMG/M
3300012071	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA067 MetaG	Host-Associated	Open in IMG/M
3300012073	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA063 MetaG	Host-Associated	Open in IMG/M
3300012076	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA055 MetaG	Host-Associated	Open in IMG/M
3300012083	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaG	Host-Associated	Open in IMG/M
3300012119	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC072 MetaG	Host-Associated	Open in IMG/M
3300012126	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC081 MetaG	Host-Associated	Open in IMG/M
3300012130	Attine ant fungus gardens microbial communities from Florida, USA - TSFL048 MetaG	Host-Associated	Open in IMG/M
3300012135	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA066 MetaG	Host-Associated	Open in IMG/M
3300012139	Attine ant fungus gardens microbial communities from Florida, USA - TSFL045 MetaG	Host-Associated	Open in IMG/M
3300012141	Attine ant fungus gardens microbial communities from Florida, USA - TSFL042 MetaG	Host-Associated	Open in IMG/M
3300012144	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC080 MetaG	Host-Associated	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012674	Attine ant fungus gardens microbial communities from Florida, USA - TSFL046 MetaG	Host-Associated	Open in IMG/M
3300012995	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM2	Host-Associated	Open in IMG/M
3300012998	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM3	Host-Associated	Open in IMG/M
3300013000	Fungus gardens microbial communities from leaf cutter ant in Ribeir?o Preto, State of S?o Paulo, Brazil - Atta laevigata ALBM1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0153970_10002212	3300011394	Attine Ant Fungus Gardens	MNIEWDYNYYQPSDNEWLVDEIMAILDKDIIMQ
Ga0153970_10017687	3300011394	Attine Ant Fungus Gardens	MNIERDYSYYQPWSDNEWLVDEMIAMREKTLTVQNEDVTMQ*
Ga0153970_10054516	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNKWLVDEIMAIQEETLMAQSKDITMQQ*
Ga0153970_10063005	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMEEMLMAQNEDITMQ
Ga0153970_10091181	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIMAMREEMLMAQNKDITMQ*
Ga0153970_10093121	3300011394	Attine Ant Fungus Gardens	MDVMNIEWDYSYYQPWSDNEWLVDEIMAMREEMLMAQNKDITMQ*
Ga0153970_10119033	3300011394	Attine Ant Fungus Gardens	MNIEWDYRYYQPWSDNEWLVDKMIAMQEETLIAQNEDITMQ*
Ga0153970_10123892	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNKWLVDEMIAMREEMLMAQNEDITMQ*
Ga0153970_10307671	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITLQ*
Ga0153970_10313801	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIMAIQEEKLMAQNEDITIQ*
Ga0153970_10336093	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMQEEMLMAQNEDITMQ*
Ga0153970_10339111	3300011394	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMTQNEDITIQ*
Ga0153960_10215034	3300011396	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMQEEMLMAQNKDITMQ*
Ga0153960_10340691	3300011396	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIIAMREEMLMVQNEDITMQ*
Ga0153960_10682151	3300011396	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIIAMREEMLMVQNKDIT
Ga0153984_10016251	3300011401	Attine Ant Fungus Gardens	SVMNIEWDYSYYQPWSDNEWLVDEIIAMREEMLMVQNEDITMQ*
Ga0153984_10037904	3300011401	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMQEEMLMVQNEDITMQ*
Ga0153984_10052893	3300011401	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREETLTVQNEDITMQ*
Ga0153984_10060406	3300011401	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIMAIQEETLMAQSKDITMQQ*
Ga0153984_10105901	3300011401	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMQEEMLMAQNEDITM
Ga0153984_10143981	3300011401	Attine Ant Fungus Gardens	MTEEGNVINIEWDYSYYQPWSDNEWLVDKMIAMQEEMLIAQNEDITMQ*
Ga0153984_10187001	3300011401	Attine Ant Fungus Gardens	MNIKWDYRYYQPWSDNEWLVDKMIAMQEETLMAQNEDITMQ*
Ga0154007_100040010	3300012054	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMEEMLMVNEDITMQ*
Ga0154007_10014252	3300012054	Attine Ant Fungus Gardens	MNIEWDYRYYQPWSDNEWLVDKMIAMQEETLMAQNEDITMQ*
Ga0154007_10016063	3300012054	Attine Ant Fungus Gardens	MNIKWDYSYYQPWSDNKWLVDEMIAIEEMLMAQNEDIIMQ
Ga0154007_10025921	3300012054	Attine Ant Fungus Gardens	MCWGCVVMNIEWDYSYYQPWSDNKWLVDEMIAMREEMLTVQNEDITMQ*
Ga0154007_10047863	3300012054	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVNEMIAMREETLTVQNEDITMQ*
Ga0154007_10065273	3300012054	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITIQ*
Ga0154007_10152211	3300012054	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSNNEWLVDEMIAMREEMLTVQNEDITMQ*
Ga0153995_10019065	3300012057	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREETLIAQNEDITMQ*
Ga0153995_10019977	3300012057	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREKTLTVQNEDVTMQ*
Ga0153995_10083231	3300012057	Attine Ant Fungus Gardens	VMNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITIQ*
Ga0153995_10541321	3300012057	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITMQ*
Ga0153991_10015241	3300012059	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDI
Ga0153991_10119935	3300012059	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIMAMREEMLMAQNK
Ga0153991_10135623	3300012059	Attine Ant Fungus Gardens	MNIEWDYRYYQPWSDNEWLVDKMIAMQEKTLMAQNEDITMQ*
Ga0153991_10659891	3300012059	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNKWLVDEMIAMREEMLMEQNEDTTMQ*
Ga0153965_10008365	3300012069	Attine Ant Fungus Gardens	MNIEWDYNYYQPWSDNEWLVDEMIAMEETLIVQNEDITI
Ga0153965_10008376	3300012069	Attine Ant Fungus Gardens	MNIEWDYNYYQPWSDNEWLVDEMIAMREEMLMVQNKDTTMQ*
Ga0153965_10036093	3300012069	Attine Ant Fungus Gardens	VMNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITMQ*
Ga0153965_10041415	3300012069	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNKWLVDKMIAMQEEALMAQNEDITMQ*
Ga0153965_10057944	3300012069	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIIAMREEMLMVQNKDITMQ*
Ga0153965_10214421	3300012069	Attine Ant Fungus Gardens	MNIKWDYSYYQPWSDNEWLVDKMIAMREEMLMVQNKDITMQ*
Ga0153965_10232733	3300012069	Attine Ant Fungus Gardens	MNIEWNYSYYQPWSDNEWLVDKMIAMQEEMLMAQDEDITMQ*
Ga0153965_10265391	3300012069	Attine Ant Fungus Gardens	MNIKWDYSYYQPWSDNEWLVDKMIAMQEEALMAQNEDIAMQ*
Ga0153965_10324251	3300012069	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNKWLVDEMIAMREEMLMTQNEDITIQ*
Ga0153965_10510441	3300012069	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSNNKWLVDEIIAMREEMLMAQNEDITMQ*
Ga0153965_10511632	3300012069	Attine Ant Fungus Gardens	MNIKWDYSYYQPWSDNEWLVDEMIAMREEILMVQNEDITMQ*
Ga0153965_10546052	3300012069	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMPEETLTVQNEDITIQ*
Ga0153965_10649341	3300012069	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMREETLMAQNEDITIQ*
Ga0153963_10015641	3300012070	Attine Ant Fungus Gardens	MNIEWNYSYYQPWSDNEWLVDEIIAMREEMLMAQNV*
Ga0153963_10363001	3300012070	Attine Ant Fungus Gardens	MNIKWDYRYYQPWSDNEWLVDKMIAMQEETLIAQNEDITMQ*
Ga0153963_10579571	3300012070	Attine Ant Fungus Gardens	IEWDYSYYQPWSDNEWLVDEIMAMREEMLMAQNKDITMQ*
Ga0153963_10591871	3300012070	Attine Ant Fungus Gardens	VMNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITLQ*
Ga0153963_10708071	3300012070	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREKMLMAQNEDITMQQ*
Ga0153983_10003032	3300012071	Attine Ant Fungus Gardens	MNIEWDYNYYQPSDNEWLVDEIMATLDKDIIMQ
Ga0153979_10146851	3300012073	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIMAMREEMLMAQNKDIT
Ga0153971_10410161	3300012076	Attine Ant Fungus Gardens	MNIKWDYNYYQPWSDNEWLVDEIIAMRKEMLMAQNENIIMQ*
Ga0154000_10032909	3300012083	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAM*EEMLMAQNEDIT
Ga0154000_10614771	3300012083	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSNNEWLVDEMIAMREETLTVQNEDITMQ*
Ga0153988_100079116	3300012119	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNKDITMQ*
Ga0153988_10035371	3300012119	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMEKTLMVQNEDITIQ
Ga0153988_10060092	3300012119	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKIIAMRKEMLMAQNENITMQ*
Ga0153997_10066423	3300012126	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVNEMIAMREEMLTVQNEDITMQ*
Ga0153964_10030582	3300012130	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNKWLVDEMIAMREEMLMAQNEDITIQ*
Ga0153982_10108082	3300012135	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIIAMREEMLMGQNEDITMQ*
Ga0153982_10219061	3300012135	Attine Ant Fungus Gardens	MNIEWDYNYYQPWSDNEWLVDKMIAMREEMLMVQNEDITMQ*
Ga0153961_10009217	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIIAMQEETLMAQNEDITVRAQSLNGG*
Ga0153961_10013007	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEIIAMREEALMAQNEDITMQ*
Ga0153961_10014372	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNKWLVDKMIAMREEMLMVQNEDITIQ*
Ga0153961_10017072	3300012139	Attine Ant Fungus Gardens	MNIEWNYSYYQPWSDNEWLVDKMIAMQEEMLMAQNKDITMQ*
Ga0153961_10050561	3300012139	Attine Ant Fungus Gardens	MCWGCVVMNIEWDYSYYQPWSDNEWLVDEMIAMREEMLTVQNEDITMQ*
Ga0153961_10137871	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSNNEWLVDEMIAMREEMLTVQNEDITM*
Ga0153961_10260371	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMQEEALMAQNEDITMQ*
Ga0153961_10428312	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMAQNEDITMQ*
Ga0153961_10437241	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMREEALMAQNEDITMQ*
Ga0153961_10737851	3300012139	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMMAMQEEALIAQNEDITMQ*
Ga0153958_10019596	3300012141	Attine Ant Fungus Gardens	MNIEWDYNYYQPWSDNEWLVDEMIAMREEMLMVQNEDTTMQ*
Ga0153958_10169981	3300012141	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSNNEWLVDEMIAMREETLTVQNEDITM*
Ga0153996_10010557	3300012144	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMQEEMLMAQNEDITMQQ*
Ga0153996_100198712	3300012144	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMEEILMVNEDITMQ*
Ga0153996_10040041	3300012144	Attine Ant Fungus Gardens	MRTTLKQTVSIMNIEWGYSYYQPWSDNEWLVDEIMVLMDKDTTMQ*
Ga0153996_10118763	3300012144	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDKMIAMEEMLMVQNEDITMQ
Ga0153996_10342091	3300012144	Attine Ant Fungus Gardens	MNIKWDYSYYQPWSDNEWLVDEIIAMQEEALMAQNEDIAMQ*
Ga0153996_10676801	3300012144	Attine Ant Fungus Gardens	MKFVTETVMNIEWDYSYYQPWSDNEWLVDEMITMREKMLMAQNKDITMQ*
Ga0153990_100068410	3300012169	Attine Ant Fungus Gardens	NIEWDYSYYQPWSDNEWLVDEIIAMREEMLMAQNKDITMQ*
Ga0153990_10548671	3300012169	Attine Ant Fungus Gardens	YSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITIQ*
Ga0153974_10159963	3300012180	Attine Ant Fungus Gardens	YVMNIEWDYSYYQPWSDNEWLVDEIIAMREEMLMAQNKDITMQ*
Ga0153962_10185023	3300012674	Attine Ant Fungus Gardens	TNTTSVMNIEWDYSYYQPWSDNEWLVDKMIAMEEMLMVNEDITMQ*
Ga0153962_10605131	3300012674	Attine Ant Fungus Gardens	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLMTQNEDI
Ga0157361_10074631	3300012995	Fungus Garden	MVCDAGIEATIIMNIEWDYGYYQPWSDNKWLVDEIMILLNEDITMQ*
Ga0157361_10087462	3300012995	Fungus Garden	MAAISVMNIEWDYNYYQPWSDNEWLVDKMIVMLDEDITMQ*
Ga0157361_10165464	3300012995	Fungus Garden	MLLPIVVMNIEWDYNYYQPWSDNEWLVDEMLAMLDEDIIMQ*
Ga0157362_10007222	3300012998	Fungus Garden	MFYIPLVINIEWDYSYYQPWSDNEWLVDEIIAMREEMLMVQNEDITMQ*
Ga0157362_10071063	3300012998	Fungus Garden	MNIEWDYSYYQPWSNNEWLVDEMIAMREEMLVEQNEDITMQ*
Ga0157362_10161721	3300012998	Fungus Garden	MNIKWDYSYYQPWSDNEWLVEEMIAMREKTLMEQNEDITMQ*
Ga0157362_10171369	3300012998	Fungus Garden	MNIEWDYSYYQPWSDNEWLVEKMIAMQEETLMEQNEDITMQ*
Ga0157362_10472801	3300012998	Fungus Garden	MNIEWDYSYYQPWSDNEWLVEEMIAMREEMLMEQNEDITMQ*
Ga0157362_10477341	3300012998	Fungus Garden	MNIEWDYSYYQPWSDNEWLVDEMIAMREEMLVEQNKDITMQ*
Ga0157362_10910171	3300012998	Fungus Garden	MNIEWDYSYYQPWSDNEWLVEEMIAMREEMLMEQNEDITVQ*
Ga0157362_11242351	3300012998	Fungus Garden	MNIKWDYSYYQPWSDNEWLVDEMIAMREEMLMVQNEDITMQ*
Ga0157362_11394491	3300012998	Fungus Garden	MNIEWDYSYYQPWSDNEWLVDKMLAMREETLMAHNEDITMQ*
Ga0157360_10102871	3300013000	Fungus Garden	MNIEWDYSYYQPWSDNEWLVDEIIAMREETLIVQNEDITMQ*
Ga0157360_10123351	3300013000	Fungus Garden	MNIEWDYSYYQPWSDNEWLVDKMIAMREEMLMVQNEDITMQ*
Ga0157360_10193111	3300013000	Fungus Garden	MNIEWDYSYYQPWSDNEWLVDKMLGELDEDVITWQNG*
Ga0157360_10575801	3300013000	Fungus Garden	MNIEWDYSYYQPWSDNEWLVDKMLAMLDEDVTMQ*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093007

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences