NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F093024

Metagenome Family F093024

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093024
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 72 residues
Representative Sequence MTLLAGRGYRDVVLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAADYRRFDTRAINATGLPAVVSYRCVATDR
Number of Associated Samples 66
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 44.34 %
% of genes near scaffold ends (potentially truncated) 40.57 %
% of genes from short scaffolds (< 2000 bps) 90.57 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (79.245 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(57.547 % of family members)
Environment Ontology (ENVO) Unclassified
(87.736 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(54.717 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 48.08%    β-sheet: 0.00%    Coil/Unstructured: 51.92%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF14216DUF4326 2.86
PF00239Resolvase 1.90
PF05137PilN 0.95
PF04116FA_hydroxylase 0.95
PF02852Pyr_redox_dim 0.95
PF05335DUF745 0.95
PF00872Transposase_mut 0.95
PF07859Abhydrolase_3 0.95
PF13450NAD_binding_8 0.95
PF13472Lipase_GDSL_2 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 1.90
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 1.90
COG3166Type IV pilus assembly protein PilNCell motility [N] 1.90
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.95
COG3000Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilyLipid transport and metabolism [I] 0.95
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A79.25 %
All OrganismsrootAll Organisms20.75 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300010361|Ga0126378_10146350Not Available2399Open in IMG/M
3300010376|Ga0126381_101733204Not Available902Open in IMG/M
3300010376|Ga0126381_101895175Not Available860Open in IMG/M
3300012203|Ga0137399_10781303Not Available804Open in IMG/M
3300012685|Ga0137397_11316202Not Available513Open in IMG/M
3300012922|Ga0137394_10234683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1568Open in IMG/M
3300016270|Ga0182036_11934596Not Available500Open in IMG/M
3300016294|Ga0182041_10178347All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1670Open in IMG/M
3300016319|Ga0182033_10806768Not Available827Open in IMG/M
3300016319|Ga0182033_11843333Not Available549Open in IMG/M
3300016319|Ga0182033_12096710Not Available516Open in IMG/M
3300016341|Ga0182035_10996700Not Available742Open in IMG/M
3300016357|Ga0182032_11801592Not Available535Open in IMG/M
3300016357|Ga0182032_11801592Not Available535Open in IMG/M
3300016357|Ga0182032_11880273Not Available524Open in IMG/M
3300016371|Ga0182034_10475821Not Available1038Open in IMG/M
3300016422|Ga0182039_10999866Not Available750Open in IMG/M
3300016422|Ga0182039_11677801Not Available581Open in IMG/M
3300016445|Ga0182038_10682047All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium893Open in IMG/M
3300020579|Ga0210407_10119860Not Available2012Open in IMG/M
3300020581|Ga0210399_10573454Not Available935Open in IMG/M
3300021168|Ga0210406_10623568Not Available839Open in IMG/M
3300021178|Ga0210408_11146922Not Available596Open in IMG/M
3300021560|Ga0126371_12943969Not Available577Open in IMG/M
3300031231|Ga0170824_112260330Not Available2139Open in IMG/M
3300031543|Ga0318516_10140267All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas aestuarii1385Open in IMG/M
3300031543|Ga0318516_10225877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1082Open in IMG/M
3300031544|Ga0318534_10862711Not Available507Open in IMG/M
3300031545|Ga0318541_10031084Not Available2645Open in IMG/M
3300031545|Ga0318541_10348392Not Available827Open in IMG/M
3300031545|Ga0318541_10515845Not Available669Open in IMG/M
3300031545|Ga0318541_10592264Not Available620Open in IMG/M
3300031545|Ga0318541_10777586Not Available534Open in IMG/M
3300031546|Ga0318538_10417537Not Available726Open in IMG/M
3300031561|Ga0318528_10147842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1250Open in IMG/M
3300031561|Ga0318528_10342602Not Available802Open in IMG/M
3300031561|Ga0318528_10676653Not Available552Open in IMG/M
3300031572|Ga0318515_10012309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales3866Open in IMG/M
3300031573|Ga0310915_10379552Not Available1003Open in IMG/M
3300031679|Ga0318561_10272632Not Available924Open in IMG/M
3300031680|Ga0318574_10207165Not Available1127Open in IMG/M
3300031680|Ga0318574_10684401Not Available601Open in IMG/M
3300031708|Ga0310686_103132047All Organisms → cellular organisms → Bacteria → Proteobacteria2438Open in IMG/M
3300031713|Ga0318496_10545063Not Available641Open in IMG/M
3300031713|Ga0318496_10837414Not Available507Open in IMG/M
3300031719|Ga0306917_10148631Not Available1736Open in IMG/M
3300031719|Ga0306917_11195816Not Available590Open in IMG/M
3300031719|Ga0306917_11451477All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium528Open in IMG/M
3300031723|Ga0318493_10562034Not Available634Open in IMG/M
3300031736|Ga0318501_10308327All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium846Open in IMG/M
3300031736|Ga0318501_10398639Not Available743Open in IMG/M
3300031744|Ga0306918_10053241All Organisms → cellular organisms → Bacteria2699Open in IMG/M
3300031744|Ga0306918_10825897Not Available723Open in IMG/M
3300031764|Ga0318535_10098254All Organisms → cellular organisms → Bacteria → Proteobacteria1280Open in IMG/M
3300031764|Ga0318535_10161743Not Available999Open in IMG/M
3300031768|Ga0318509_10099696Not Available1565Open in IMG/M
3300031771|Ga0318546_10644594Not Available745Open in IMG/M
3300031771|Ga0318546_10859669Not Available638Open in IMG/M
3300031771|Ga0318546_10990581Not Available591Open in IMG/M
3300031792|Ga0318529_10229970Not Available862Open in IMG/M
3300031793|Ga0318548_10485365Not Available604Open in IMG/M
3300031794|Ga0318503_10056063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1207Open in IMG/M
3300031821|Ga0318567_10673022Not Available587Open in IMG/M
3300031831|Ga0318564_10160156Not Available1004Open in IMG/M
3300031833|Ga0310917_10480557Not Available845Open in IMG/M
3300031833|Ga0310917_10757899Not Available656Open in IMG/M
3300031833|Ga0310917_11114406Not Available526Open in IMG/M
3300031879|Ga0306919_10599249Not Available850Open in IMG/M
3300031879|Ga0306919_10639393Not Available820Open in IMG/M
3300031879|Ga0306919_10974426Not Available649Open in IMG/M
3300031879|Ga0306919_11326483Not Available544Open in IMG/M
3300031880|Ga0318544_10167870Not Available844Open in IMG/M
3300031890|Ga0306925_11223620Not Available751Open in IMG/M
3300031890|Ga0306925_11376406Not Available697Open in IMG/M
3300031890|Ga0306925_12248677Not Available505Open in IMG/M
3300031897|Ga0318520_10828325Not Available581Open in IMG/M
3300031897|Ga0318520_11004856Not Available527Open in IMG/M
3300031910|Ga0306923_10629356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1201Open in IMG/M
3300031910|Ga0306923_11600770Not Available677Open in IMG/M
3300031912|Ga0306921_10703348Not Available1161Open in IMG/M
3300031941|Ga0310912_11208433Not Available575Open in IMG/M
3300031942|Ga0310916_11603538Not Available528Open in IMG/M
3300031946|Ga0310910_10285993Not Available1295Open in IMG/M
3300031946|Ga0310910_10724151Not Available786Open in IMG/M
3300031947|Ga0310909_10440345Not Available1094Open in IMG/M
3300031954|Ga0306926_10101952All Organisms → cellular organisms → Bacteria3520Open in IMG/M
3300032009|Ga0318563_10087268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia arida1637Open in IMG/M
3300032010|Ga0318569_10208636All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium905Open in IMG/M
3300032051|Ga0318532_10220329Not Available673Open in IMG/M
3300032059|Ga0318533_10442213Not Available951Open in IMG/M
3300032059|Ga0318533_10991651Not Available616Open in IMG/M
3300032060|Ga0318505_10236610Not Available859Open in IMG/M
3300032065|Ga0318513_10150742Not Available1109Open in IMG/M
3300032076|Ga0306924_10378893All Organisms → cellular organisms → Bacteria → Proteobacteria1621Open in IMG/M
3300032076|Ga0306924_10637632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1202Open in IMG/M
3300032076|Ga0306924_11276773Not Available790Open in IMG/M
3300032076|Ga0306924_12001029Not Available597Open in IMG/M
3300032091|Ga0318577_10105162Not Available1324Open in IMG/M
3300032094|Ga0318540_10176951Not Available1026Open in IMG/M
3300032261|Ga0306920_100084059All Organisms → cellular organisms → Bacteria → Proteobacteria4687Open in IMG/M
3300032261|Ga0306920_100640613Not Available1570Open in IMG/M
3300032261|Ga0306920_102585157Not Available696Open in IMG/M
3300033289|Ga0310914_10106801All Organisms → cellular organisms → Bacteria2417Open in IMG/M
3300033289|Ga0310914_10898259Not Available785Open in IMG/M
3300033289|Ga0310914_11300676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium629Open in IMG/M
3300033290|Ga0318519_10407217Not Available811Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil57.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil33.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.77%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0126378_1014635043300010361Tropical Forest SoilMTPPARYRDVLLVLIALVQCYATRRQDGCSPLSYHATMAECRAQAEDYRRFDTRAINATGLPMVVSYRCVATDR*
Ga0126381_10173320413300010376Tropical Forest SoilMVAEVAPIMLPAVLYRDVLLAVIALVQCYATRTQDGCVSLSYHATMAECRLLAGDYRRFDSKALERAGIPAVVSYRCVATD
Ga0126381_10189517513300010376Tropical Forest SoilMTLVAAHRCRDVVLALIALVQCYATRTQDGCAPLSYHATMAECLVLAENYRRFDSKALARAGIPAVVSYSCVAINR*
Ga0137399_1078130313300012203Vadose Zone SoilMTLPAGRRYRDVVLAAIALVQCYATRTQEGCAPLSYHDTMAECRVLAEDYRRSDSKALARAGIPAVVSYSCVATSR*
Ga0137397_1131620223300012685Vadose Zone SoilMTLPAGRRYRDVVLAAIALVQCYATRTQEGCAPLSCHDTMAECRVLAEDYRRSDSKALARAGIPAVVSYSCVATSR*
Ga0137394_1023468333300012922Vadose Zone SoilMTLPAGRRYRDVVLAAIALVQCYATRTQEGCAPLSYHDTMAECRVLAEDYHRFDSKALARAGIPAVVSYSCVATSR*
Ga0182036_1193459613300016270SoilMVATVAPMTLPARCRDVLLALIALAQCFATRTQDGCAPLSYHVTMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0182041_1017834743300016294SoilMVATVAPMTLPARCRDVLLALIALAQCFATRTQDGCAPLSYHATMAECRVQSADYRRFDTRAINATGLPVVVSYRCVATDR
Ga0182033_1080676813300016319SoilMMRPAAHVVLAGIALIQCYATRTSDGCAPLSYHDTMAECRALADDYRRFDTKALTRAGIPAVVSYRCVATDR
Ga0182033_1184333323300016319SoilMVATVAPMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECRVQSADYRRFDTRAINATGLPVAVSYRCVATDR
Ga0182033_1209671013300016319SoilMTLPARYRNVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSKDYRRFDTRAINATGLPLVVSYRCVATDR
Ga0182035_1099670033300016341SoilVTVLAAIALVQCYATRTQDGCAPLSYHDTMAECRALAGDYRRVDTKALTRAGIPAVVSYHCVAADR
Ga0182032_1180159213300016357SoilVRTALAGHLVLAGIALVQCYATRTQDGCLPLSYHDTMAEFRVLVNDYRRFDTKALKATGLLAVVSYRCLATGR
Ga0182032_1180159223300016357SoilAVVAAVVPMTLWASRGYRDVLLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAADYRRFDTRAINATGLPAVVSYRCLATGR
Ga0182032_1188027323300016357SoilMTLSARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0182034_1047582133300016371SoilLAGHLVLAGIALVQCYATRTQDGCLPLSYHDTMAECRVLANDYRRFDTKALKATGLPAVVSYRCLATGR
Ga0182039_1099986633300016422SoilVTVLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAGDYRRFDTKALTRAGIPAVVSYHCVATDR
Ga0182039_1167780113300016422SoilVRTALAGHLVLAGIALVQCYATRTQDGCLPLSYHDTMAECRVLANDYRRFDTKALTRAGIPAVVS
Ga0182038_1068204723300016445SoilVTVLAAIALVQCCATRTQDGCAPLSYHDTMAECRVLADDYRRFDTKALTRAGIPAVVSYHCVAADR
Ga0210407_1011986023300020579SoilMVAAVVPVTLPASHRSVVLAAIALVQCYATRSQDGCAPLSYHATMAECRALAEGYRRFDSKALNATGLPAVVSYRCVGTNR
Ga0210399_1057345423300020581SoilMVAAVVPVTLPASHRSVVLAAIALVQCYATRSQDGCAPLSYHATMAECRALAEDYRRFDSKALNATGLPAVVSYRCIGTNR
Ga0210406_1062356813300021168SoilMVAAVVPVTLPASHRSVVLAGIALVQCYATRSQDGCTPLSYHATMAECRALAEDYRRFDSKALNATGLPAVVSYRCIGTNR
Ga0210408_1114692223300021178SoilMVAAVVPVTLPASHRYRSVALAGIALIQCYATRTQNGCAPLSYHATMAECRALAEGYRRFDSKALNATGLPAVVSYRCVGTNR
Ga0126371_1294396913300021560Tropical Forest SoilSETPLAQHGKAGSQMTLVAEHRCRDVVLALIALVQCYATRTQDGCAPLSYHATMAECLVLAENYRRFDNKALARTGIPAVVSYSCVAINR
Ga0170824_11226033033300031231Forest SoilMAMMVPQMTLPAGRRYRDVVLVAIALVQCYATRTQEGCAPLSYHDTMAECRVLAEDYRRFDSKALARAGIPAVVSYSCVATSR
Ga0318516_1014026723300031543SoilMRFPAAHVVVAVIALIQCYATRTQDGCAPLSYHDTMAECRGLADDYRRFDTKALTRAGIPAVVSYHCVATNR
Ga0318516_1022587723300031543SoilVQCYATRTQDGCAPLSYHETMAECRVLAADYRRFDSRALNATGLPVVVSYRCVATDR
Ga0318534_1086271123300031544SoilVRTALAGHLVLAGIALVQCYATRTQDGCLPLSYHDTMAECRVLANDYRRFDTKALKATGLPAVVSYRCLATGR
Ga0318541_1003108413300031545SoilVTVLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAGDYRRFDTKALTRPGIPAVVSWRYAG
Ga0318541_1034839213300031545SoilVRTALAGHLVLAGIALVQCYATRTQDGCLPLSYHDTMAECRVLANDYRRFDTKALKATGLPAVVSYRCLA
Ga0318541_1051584523300031545SoilMMRPAAHVVLAGIALIQCYATRTSDGCAPLSYHDTMAECRALADDYRRFDTKALTRAGIPAGVSYRAQ
Ga0318541_1059226423300031545SoilMTRPAVHVVLAGIALIQCYATRTSVGCAPLSYHETMAECRVLAGDYRRLDTKALTRAGIPAVVSYHCV
Ga0318541_1077758623300031545SoilRYRAVVLAAIALVQCYATRTQDGCAPVSYHATMAECRVLAEDYRRFDTKALNATGLPAVVSYRCVVTNR
Ga0318538_1041753713300031546SoilMILAAARYRAVVLAAIALVQCYATRTQDGCAPVSYHATMAECRVLAEDYRRFDTKALNATGLPAVVSYRCVVTNR
Ga0318528_1014784233300031561SoilVTSSWLRWPLVQCYATRTSDGCAALSYHDTVAECRGLADDYRRFDTKALTRAGIPAVVSYHCVAADR
Ga0318528_1034260233300031561SoilLIQCYATRTQDGCAPLSYHDTMAECRGLADDYRRFDTKALTRAGIPAVVSYHCVATNR
Ga0318528_1067665333300031561SoilVTVLAAIALVQCYATRTQDGCAPLSYHDTMAECRALAGDYRRVDTKALTRAGIPAIVSYRDQDNHP
Ga0318515_1001230923300031572SoilVQCYATRSRDGCAPLSYHDTMAGCRVLAEEYRRFDSKAPERAGIPAVVSYRCVATDR
Ga0310915_1037955223300031573SoilVTVLAAIALVQCYATRTQDGCAPLSYHDAMAECRVLADDYRRFDTKALTRAGIPAVVSYHCVATDR
Ga0318561_1027263223300031679SoilMTRPAVHVVLAGIALIQCYATRTSDGCAPLSYHDTMAECRALADDYRRFDTKALTRAGIPAVVSYRCVATDR
Ga0318574_1020716523300031680SoilVVAALVPGMRFPAAHVVVAVIALIQCYATRTQDGCAPLSYHDTMAECRGLADDYRRFDTKALTRAGIPAVVSYHCVATNR
Ga0318574_1068440113300031680SoilVTVLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLADDYRRFDTKALTRAGIPAVVSYHCVATDR
Ga0310686_10313204723300031708SoilVVATVVPVTLPASRRYRSVVLAAIALVQCYATRTQDGCAPLSYHATMAECRALAEDYRRFDSKALNATGLPAVVSYRCVGTNR
Ga0318496_1054506323300031713SoilVQCYATRSRDGCAPLSYHDTMAGCRVLAEEYRRFDSKAPERAGIPAVVSYR
Ga0318496_1083741413300031713SoilVQCYATRSRDGCAPLSYHDTMAGCRVLAEEYRRFDSKAPERAWIPAVVSYRCVATDR
Ga0306917_1014863123300031719SoilMRLQADRYRDVLLAAIALVQCYATRTQDGCVPFSYHATMAECRALAGDYRQFDTKALERAGIPAVVSYRCVATDR
Ga0306917_1119581613300031719SoilMMVPQMTLPSGRRYRDVLLAAIALVQCYATRTQNGCAPLSYHETMAECRTLAADYRRFDSRALNATGLPAVVSYRCIATDR
Ga0306917_1145147713300031719SoilQCYATRTSDGCAALSYHDTVAECRGLADDYRRFDTKALTRAGIPAVVSYHCVAADR
Ga0318493_1056203423300031723SoilRGIAYPARDAERTPPVVARVTPMTLPARYRNVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0318501_1030832713300031736SoilAGIALIQCYATRTSVGCAPLSYHETMAECRVLAGDYRRLDTKALTRAGIPAVVSYHCVATDR
Ga0318501_1039863923300031736SoilMRFPAAHVVVAGIALIQCYATRTQDGCAPLSYHDTMAECRGLADDYRRFDTKALTRAGIPAVVSYHCVATNR
Ga0306918_1005324113300031744SoilMVATVAPMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0306918_1082589713300031744SoilMMRPAAHVVLAGIALIQCYATRTSDGCAPLSYHDTMAECRALADDYRRFDTKALTRAGIPAEVSYRCVATDR
Ga0318535_1009825413300031764SoilIVTSSWLRWPLVQCYATRTSDGCAALSYHDTMAECRGLADDYRRFDTKALTRAGIPAVVSYHCVAADR
Ga0318535_1016174313300031764SoilVTSSWLRWPLVQCYATRTSDGCAALSYHDTVAECRGLADDYRRFDTKALTRAGIPAVVSY
Ga0318509_1009969653300031768SoilMTRPAVHVVLAGIALIQCYATRTSVGCAPLSYHETMAECRVLAGDYRRLDTKALTRAGIPAVVSYHCVATD
Ga0318546_1064459423300031771SoilVRTALAGHLVLAGIALVQCYATRTQDGCLPLSYHDTMAECRVLANDYRRFDTKALKATGLPAVVSYRCLAT
Ga0318546_1085966913300031771SoilSSGARSGAGTAARGPPMTLPADIATVLLALIALVQCYATRTQDGCAPLSYHATMAECRKLASEYQKFDTRDLRIKGVPAVVSYQCVTVK
Ga0318546_1099058113300031771SoilMVATVAPMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHVTMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0318529_1022997023300031792SoilMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHVTMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0318548_1048536523300031793SoilACGKYRPVPPVAPRMMRPAAHVVLAGIALIQCYATRTSDGCAPLSYHDTMAECRALADDYRRFDTKALTRAGIPAGVSYRAQ
Ga0318503_1005606313300031794SoilAAIALVQCYATRTQDGCAPLSYHETMAECRVLAADYRRFDSRALNATGLPVVVSYRCVATDR
Ga0318567_1067302223300031821SoilMTLWASRGYRDVLLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAADYRRFDTRAINATGLPAVVSYRCVATDR
Ga0318564_1016015623300031831SoilMTLWASRGYRDVLLAAIALVQCYATRTQDGCAPLSYHATMAECRVLAAEYHRFDSKALERAGVPAVVSYRCVAANR
Ga0310917_1048055733300031833SoilVRTALAGHLVLAGIALVQCYATRTQDGCLPLSYHDTMAECRVLANDYRRFDTKALKATGL
Ga0310917_1075789923300031833SoilMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0310917_1111440613300031833SoilMVAEVVARMILAAARYRAVVLAAIALVQCYATRTQDGCAPVSYHATMAECRVLAEDYRRFDTKALNATGLPAVVSYRCVVTNR
Ga0306919_1059924913300031879SoilMILAAARYRAVVLAAIALVQCYATRTQDGCAPVSYHATMAECRVLAEDYRRFDTKALNATGLPAVVSYRCVATDG
Ga0306919_1063939313300031879SoilMTRPAVHVVLAGIALIQCYATRTSVGCAPLSYHETMAECRVLAGDYRRLDTKALTRAGIPAVVSYHCVATDR
Ga0306919_1097442613300031879SoilVTVLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAGDYRRFDTKALTRPGIPAVVSYRCVATDR
Ga0306919_1132648313300031879SoilMVATVAPMTLPARCRDVLLALIALAQCFATRTQDGCAPLSYHATMAECRVQSADYRRFDTRAINATGLPVAVSYRCVATDR
Ga0318544_1016787023300031880SoilMTLSARYRDVLLALIALVQCYATRTQDGCAPLSYHVTMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0306925_1122362023300031890SoilLVQCYATRTQDGCAPLSYHDTMAECRVLAADYRRFDTRAINATGLPAVVSYRCVATDR
Ga0306925_1137640613300031890SoilAARGPPMTLPADIATVLLALIALVQCYATRTQDGCAPLSYHATMAECRKLASEYQKFDTRDLRIKGVPAVVSYQCVTVK
Ga0306925_1224867723300031890SoilMTLPARCRDVLLALIALAQCFATRTQDGCAPLSYHATMAECRVQSADYRRFDTRAINATGLPVAVSYRCVATDR
Ga0318520_1082832523300031897SoilMRPAAHVVLAGIALIQCYATCTSDGCAPLSYHDTMAECRALADDYRRFDTKALTRAGIPAGVSY
Ga0318520_1100485613300031897SoilMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYR
Ga0306923_1062935633300031910SoilLVQCYATRTSDGCAALSYHDTVAECRGLADDYRRFDTKALTRAGIPAVVSYHCVAADR
Ga0306923_1160077013300031910SoilPDNDTSPLIQSARPAVVAQVVPRMRFPAGYRYRDVVLAAIALVQCYATRTQNGCAPLSYHATMAECRVLAEDYRRFDSRAINATGLPAVVSCRCIATDR
Ga0306921_1070334813300031912SoilLRGGGPAGRERAVKSTSVVAEVAQMRLQADRYRDVLLAAIALVQCYATRTQDGCVPFSYHATMAECRALAGDYRQFDTKALERAGIPAVVSYRCVATDR
Ga0310912_1120843313300031941SoilMTLWASRGYRDVLLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAADYRRFDTRAINATGLPAVVSYRCLATGR
Ga0310916_1160353813300031942SoilERTPPMVATVAPMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0310910_1028599313300031946SoilVTSSWLRWPLVQCYATRTSDGCAALSYHDTVAECRGLADDYRRFDTKALTRAGIPAVVSYHCVAT
Ga0310910_1072415113300031946SoilVATVAPMTLSARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0310909_1044034533300031947SoilQCYATRTQDGCAPVSYHATMAECRVLAEDYRRFDTKALNATGLPAVVSYRCVVTNR
Ga0306926_1010195213300031954SoilGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVSYRCVATDR
Ga0318563_1008726833300032009SoilMTLLAGRGYRDVVLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAADYRRFDTRAINATGLPAVVSYRCVATDR
Ga0318569_1020863623300032010SoilVQCYATRTQDGCAPLSYHETMAECRVAAADYRRFDSRALNATGLPVVVSYRCVATDR
Ga0318532_1022032913300032051SoilVTVLAAIALVQCYATRTQDGCAPLSYHDTMAECRALAGDYRRVDTKALTRAGIPAIVSYRDQDNHPLLPEAP
Ga0318533_1044221333300032059SoilCYATRTQDGCVPFSYHATMAECRALAGDYRQFDTKALERAGIPAVVSYRCVATDR
Ga0318533_1099165123300032059SoilVQCYATGTQDGCAPLSYHATMAECRVLAADYRRFDTRALNATGLPAVVSYRCVAT
Ga0318505_1023661023300032060SoilVRTALAGHLVLAGIALVQCYATRTQDGCLPLSCHDTMAECRVLANDYRRFDTKALKATGLPAVVSYRCLATGR
Ga0318513_1015074233300032065SoilMRFPAAHVVVAVIALIQCYATRTQDGCAPLSYHDTMAKCRGLADDYRRFDTKALTRAGIPAVVSYHCVATNR
Ga0306924_1037889323300032076SoilVTVLAAIALVQCYATRPQDGCAPLSYHDTMAECRVLAGDYRRFDTKALTRPGIPAVVSYRCVATDR
Ga0306924_1063763223300032076SoilVVATVVARMTRPAVHVVLAGIALIQCYATRTSVGCAPLSYHETMAECRVLAGDYRRLDTKALTRAGIPAVVSYHCVATDR
Ga0306924_1127677323300032076SoilVAKVAPMTFSAARYRHVLLAAIALVQCYSSRTQNGCAPLSYPATMAKCRTLAADYRRFDTKALNATGLPIVVSYRCVATDR
Ga0306924_1200102913300032076SoilVTVLAAIALVQCYATRTQDGCAALSYHDTMAECRGLADDYRRFDTKALTRAGIPAVVSYHRVATDR
Ga0318577_1010516213300032091SoilMTLSARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPLVVSYRCVATDR
Ga0318540_1017695113300032094SoilMVATVAPMTLPARCRDVLLALIALAQCFATRTQDGCAPLSYHATMAECRVQSADYRRFDTRAINATGLPVAVSYRCVA
Ga0306920_10008405923300032261SoilMTLPADIATVLLALIALVQCYATRTQDGCAPLSYHATMAECRKLASEYQKFDTRDLRIKGVPAVVSYQCVTVK
Ga0306920_10064061313300032261SoilMTLWASRGYRDVLLAAIALVQCYATRTQDGCAPLSYHDTMAECRVLAADYRRFDTRAINATGLPAVVSYRCVATD
Ga0306920_10258515723300032261SoilVVAMMVPQMTLPSGRRYRDVLLAAIALVQCYATRTQNGCAPLSYHETMAECRTLAADYRRFDSRALNATGLPAVVSYRCIATDR
Ga0310914_1010680113300033289SoilMTLPARYRDVLLALIALVQCYATRTQDGCAPLSYHATMAECQVQSEDYRRFDTRAINATGLPVVVCYRCVGT
Ga0310914_1089825923300033289SoilVTVLAAIALVQCYATRTQDGCAPLSYHHTMAECRVLAGDYRRFDTKALTRPGIPAVVSYRCVATDR
Ga0310914_1130067613300033289SoilYARPKWPTAAVVATVVARMTRPAVHVVLAGIALIQCYATRTSVGCAPLSYHETMAECRVLAGDYRRLDTKALTRAGIPAVVSYHCVATDR
Ga0318519_1040721713300033290SoilMTRPAVHVVLAGIALIQCYATRTSDGCAPLSYHDTMAECRALADDYRRFDTKALTRAGIPAGVSYRAQ


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