Metagenome / Metatranscriptome Family F093056

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	48 residues
Representative Sequence	MTYKRYEYWSKEGKVWTDWFPWNSDIRPELQMDDRRIFCRLKNEYKDV
Number of Associated Samples	37
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	17.92 %
% of genes near scaffold ends (potentially truncated)	21.70 %
% of genes from short scaffolds (< 2000 bps)	70.75 %
Associated GOLD sequencing projects	33
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.925 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (85.849 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.774 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 36.84% Coil/Unstructured: 63.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01569	PAP2	4.72
PF13392	HNH_3	1.89
PF13645	YkuD_2	0.94
PF13597	NRDD	0.94
PF13730	HTH_36	0.94
PF04851	ResIII	0.94
PF00075	RNase_H	0.94
PF01797	Y1_Tnp	0.94
PF07453	NUMOD1	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
All Organisms	root	All Organisms	32.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
cellular organisms	root	All Organisms → cellular organisms	24.53 %
Viruses	superkingdom	All Organisms → Viruses	7.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.21 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	11.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	11.32 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	10.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	11.32 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	10.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	11.32 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	10.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	11.32 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	10.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	11.32 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	10.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methanobrevibacter	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter	11.32 %
Prevotellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	9.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
unclassified Methanobrevibacter	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter	11.32 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	8.49 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methanobrevibacter sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	11.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %
unclassified Prevotella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → unclassified Prevotella	1.89 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Methanobrevibacter sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	11.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.60 %
Prevotella sp. tc2-28	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → unclassified Prevotella → Prevotella sp. tc2-28	1.89 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009871\|Ga0130077_13405258	Not Available	884	Open in IMG/M
3300009871\|Ga0130077_13980982	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1748	Open in IMG/M
3300012983\|Ga0123349_10557310	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	801	Open in IMG/M
3300012991\|Ga0157148_1047161	Not Available	750	Open in IMG/M
3300014057\|Ga0120384_1003909	All Organisms → cellular organisms → Bacteria	10091	Open in IMG/M
3300014057\|Ga0120384_1217775	Not Available	643	Open in IMG/M
3300021254\|Ga0223824_10342425	Not Available	1288	Open in IMG/M
3300021256\|Ga0223826_10042048	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	4321	Open in IMG/M
3300021399\|Ga0224415_10036885	Not Available	4520	Open in IMG/M
3300021426\|Ga0224482_10240485	Not Available	1587	Open in IMG/M
3300021431\|Ga0224423_10412073	Not Available	1228	Open in IMG/M
3300021431\|Ga0224423_10625094	Not Available	917	Open in IMG/M
3300021540\|Ga0214517_108227	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	898	Open in IMG/M
3300024337\|Ga0255060_10301865	Not Available	791	Open in IMG/M
3300024337\|Ga0255060_10379147	Not Available	705	Open in IMG/M
3300024342\|Ga0255061_10023620	All Organisms → Viruses → Predicted Viral	2664	Open in IMG/M
3300024342\|Ga0255061_10708314	Not Available	528	Open in IMG/M
3300024345\|Ga0255062_10000215	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	11966	Open in IMG/M
3300024345\|Ga0255062_10055020	Not Available	1722	Open in IMG/M
3300024345\|Ga0255062_10062127	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1637	Open in IMG/M
3300024345\|Ga0255062_10490700	Not Available	597	Open in IMG/M
3300024486\|Ga0255059_10465695	Not Available	592	Open in IMG/M
3300026525\|Ga0256870_1009789	Not Available	4087	Open in IMG/M
3300026526\|Ga0256869_1005580	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	6666	Open in IMG/M
3300026539\|Ga0256872_10152499	Not Available	1089	Open in IMG/M
3300028048\|Ga0256405_10038011	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → unclassified Prevotella → Prevotella sp. tc2-28	4248	Open in IMG/M
3300028591\|Ga0247611_10001948	Not Available	35163	Open in IMG/M
3300028591\|Ga0247611_10392655	Not Available	1495	Open in IMG/M
3300028591\|Ga0247611_11820546	Not Available	575	Open in IMG/M
3300028805\|Ga0247608_10183855	All Organisms → Viruses → Predicted Viral	2037	Open in IMG/M
3300028832\|Ga0265298_10000217	Not Available	89426	Open in IMG/M
3300028833\|Ga0247610_10056029	All Organisms → Viruses → Predicted Viral	3855	Open in IMG/M
3300028833\|Ga0247610_10100744	Not Available	2878	Open in IMG/M
3300028833\|Ga0247610_10132074	Not Available	2521	Open in IMG/M
3300028833\|Ga0247610_10133015	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	2512	Open in IMG/M
3300028833\|Ga0247610_10720018	All Organisms → Viruses → Predicted Viral	1031	Open in IMG/M
3300028886\|Ga0256407_10622346	Not Available	786	Open in IMG/M
3300028887\|Ga0265299_10321824	Not Available	1309	Open in IMG/M
3300028887\|Ga0265299_10932415	Not Available	726	Open in IMG/M
3300028888\|Ga0247609_10021989	All Organisms → Viruses	5816	Open in IMG/M
3300028888\|Ga0247609_10460303	Not Available	1348	Open in IMG/M
3300028888\|Ga0247609_11063360	Not Available	828	Open in IMG/M
3300028888\|Ga0247609_11123903	Not Available	799	Open in IMG/M
3300028888\|Ga0247609_11472677	Not Available	670	Open in IMG/M
3300028914\|Ga0265300_10000274	Not Available	54765	Open in IMG/M
3300031085\|Ga0061018_13405258	Not Available	884	Open in IMG/M
3300031085\|Ga0061018_13980982	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1748	Open in IMG/M
3300031760\|Ga0326513_10068364	Not Available	2820	Open in IMG/M
3300031760\|Ga0326513_10297912	Not Available	1426	Open in IMG/M
3300031760\|Ga0326513_10322068	Not Available	1372	Open in IMG/M
3300031760\|Ga0326513_10622645	Not Available	972	Open in IMG/M
3300031760\|Ga0326513_11069710	Not Available	710	Open in IMG/M
3300031760\|Ga0326513_11338811	Not Available	619	Open in IMG/M
3300031760\|Ga0326513_11843669	Not Available	503	Open in IMG/M
3300031853\|Ga0326514_10003235	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	10360	Open in IMG/M
3300031853\|Ga0326514_10062168	Not Available	2855	Open in IMG/M
3300031853\|Ga0326514_10148399	Not Available	1950	Open in IMG/M
3300031853\|Ga0326514_10357173	Not Available	1284	Open in IMG/M
3300031853\|Ga0326514_10373165	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	1256	Open in IMG/M
3300031853\|Ga0326514_10422371	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1178	Open in IMG/M
3300031853\|Ga0326514_10427014	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300031853\|Ga0326514_10483487	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1097	Open in IMG/M
3300031853\|Ga0326514_10557116	Not Available	1016	Open in IMG/M
3300031853\|Ga0326514_10890925	Not Available	776	Open in IMG/M
3300031853\|Ga0326514_11015319	Not Available	717	Open in IMG/M
3300031853\|Ga0326514_11155125	Not Available	662	Open in IMG/M
3300031853\|Ga0326514_11258759	Not Available	627	Open in IMG/M
3300031867\|Ga0326511_10022016	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	5190	Open in IMG/M
3300031867\|Ga0326511_10039754	All Organisms → cellular organisms → Bacteria	3980	Open in IMG/M
3300031867\|Ga0326511_10050145	Not Available	3586	Open in IMG/M
3300031867\|Ga0326511_10057012	Not Available	3385	Open in IMG/M
3300031867\|Ga0326511_10163980	All Organisms → Viruses → Predicted Viral	2095	Open in IMG/M
3300031867\|Ga0326511_10491707	Not Available	1221	Open in IMG/M
3300031867\|Ga0326511_10631774	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	1065	Open in IMG/M
3300031867\|Ga0326511_10927232	Not Available	854	Open in IMG/M
3300031867\|Ga0326511_10998470	Not Available	816	Open in IMG/M
3300031867\|Ga0326511_11063341	Not Available	785	Open in IMG/M
3300031867\|Ga0326511_11109099	Not Available	765	Open in IMG/M
3300031867\|Ga0326511_11271667	Not Available	702	Open in IMG/M
3300031867\|Ga0326511_11345207	Not Available	677	Open in IMG/M
3300031867\|Ga0326511_11351662	Not Available	675	Open in IMG/M
3300031867\|Ga0326511_11879086	Not Available	543	Open in IMG/M
3300031961\|Ga0326510_1304650	Not Available	508	Open in IMG/M
3300031992\|Ga0310694_10831190	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	916	Open in IMG/M
3300031993\|Ga0310696_12337133	Not Available	513	Open in IMG/M
3300031994\|Ga0310691_12032605	Not Available	537	Open in IMG/M
3300031998\|Ga0310786_11341676	Not Available	761	Open in IMG/M
3300031998\|Ga0310786_12406395	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	522	Open in IMG/M
3300032038\|Ga0326512_10011135	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	6499	Open in IMG/M
3300032038\|Ga0326512_10021662	Not Available	4745	Open in IMG/M
3300032038\|Ga0326512_10034794	Not Available	3773	Open in IMG/M
3300032038\|Ga0326512_10041900	All Organisms → Viruses → Predicted Viral	3462	Open in IMG/M
3300032038\|Ga0326512_10096755	Not Available	2319	Open in IMG/M
3300032038\|Ga0326512_10134471	Not Available	1970	Open in IMG/M
3300032038\|Ga0326512_10170439	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1745	Open in IMG/M
3300032038\|Ga0326512_10223759	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1513	Open in IMG/M
3300032038\|Ga0326512_10253027	Not Available	1417	Open in IMG/M
3300032038\|Ga0326512_10310339	Not Available	1267	Open in IMG/M
3300032038\|Ga0326512_10348661	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → unclassified Methanobrevibacter → Methanobrevibacter sp.	1186	Open in IMG/M
3300032038\|Ga0326512_10463168	Not Available	1007	Open in IMG/M
3300032038\|Ga0326512_10583680	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → unclassified Prevotella → Prevotella sp. tc2-28	876	Open in IMG/M
3300032038\|Ga0326512_10596702	Not Available	865	Open in IMG/M
3300032038\|Ga0326512_10678672	Not Available	797	Open in IMG/M
3300032038\|Ga0326512_10705396	Not Available	778	Open in IMG/M
3300032038\|Ga0326512_10855179	Not Available	687	Open in IMG/M
3300033463\|Ga0310690_10007250	All Organisms → cellular organisms → Bacteria	14339	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Mammals	Host-Associated → Mammals	100.00%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Mammals → Digestive System	100.00%

Habitat	Taxonomy	Distribution
Foregut	Host-Associated → Mammals → Digestive System → Foregut	97.17%
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	1.89%
Oral Cavity	Host-Associated → Mammals → Digestive System → Oral Cavity	0.94%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	95.28%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	1.89%
Unclassified	Host-Associated → Mammals → Digestive System → Foregut → Unclassified	1.89%
Unclassified	Host-Associated → Mammals → Digestive System → Oral Cavity → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	85.85%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	5.66%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	1.89%
Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen	1.89%
Fungi-Associated Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Unclassified → Fungi-Associated Bovine Rumen	1.89%
Goat Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces	0.94%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal	0.94%
Pig Oral Cavity	Host-Associated → Mammals → Digestive System → Oral Cavity → Unclassified → Pig Oral Cavity	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009871	Cow rumen microbiome (microbial/fungal) from cows held on UI at Urbana campus farm, Champaign, IL - Rumen Fluid.Combined Assembly of Gp0148671, Gp0148672	Host-Associated	Open in IMG/M
3300012983	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 Metagenome	Host-Associated	Open in IMG/M
3300012991	Pig viral communities from oral cavity of healthy adult pig - Individual 0	Host-Associated	Open in IMG/M
3300014057	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1208	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021256	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021399	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021426	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300021431	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300021540	Enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Xylan, Gen4, Rep 3, Penicillin and Streptomycin	Host-Associated	Open in IMG/M
3300024337	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024342	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024345	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024486	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026525	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_06 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026526	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_05 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300026539	Metatranscriptome of bovine rumen microbial communities from Lethbridge, Alberta, Canada - Rumen RJG_08 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300028048	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_02	Host-Associated	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028805	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028832	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01	Host-Associated	Open in IMG/M
3300028833	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028886	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04	Host-Associated	Open in IMG/M
3300028887	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02	Host-Associated	Open in IMG/M
3300028888	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028914	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03	Host-Associated	Open in IMG/M
3300031085	Coassembly of Cow X and Y Rumen Fluid	Host-Associated	Open in IMG/M
3300031760	Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518	Host-Associated	Open in IMG/M
3300031853	Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518	Host-Associated	Open in IMG/M
3300031867	Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518	Host-Associated	Open in IMG/M
3300031961	Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300031992	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2)	Host-Associated	Open in IMG/M
3300031993	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 (v2)	Host-Associated	Open in IMG/M
3300031994	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032038	Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518	Host-Associated	Open in IMG/M
3300033463	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0130077_134052582	3300009871	Rumen	MTYKRYEYWSKEGKKFTKWFPWKSNWKPELQMNDKRIICRLFNEYKEDESICTDN*
Ga0130077_139809824	3300009871	Rumen	MIYKRYEYWSNEGKKWTKWFEWNSDYKPELQLDDRRIFCRLKNEYK*
Ga0123349_105573102	3300012983	Fecal	MILKRYEYWSKEGKKWTDWFKWNSDYRPEFQLTDRRIISRLRNEYREDN*
Ga0157148_10471611	3300012991	Pig Oral Cavity	MKKRYQYWSKDGLVWTKWFDWNSDYMPELQKDDRRTFCRLKNEYSEV*
Ga0120384_100390928	3300014057	Sheep Rumen	MIYKRYEYWSKEGKKFTDWFPWDSDIKPEFQMTDRRVISRLKNEYKEVN*
Ga0120384_12177753	3300014057	Sheep Rumen	YEYWSKEGKKFTDWFKWNSDYKPELQMNDRRIFCKLKNEYKNESIYSNCR*
Ga0223824_103424252	3300021254	Cattle And Sheep Rumen	MIYKRYEYWSNEGKKFTDWFIWDSDLRPELQMSDRRIISRLFNEYKEI
Ga0223826_100420484	3300021256	Cattle And Sheep Rumen	MIYKRYEYWSNEGKKFTDWFIWDSDLRPELQMNDRRIISRLFNEYKDV
Ga0224415_100368851	3300021399	Cattle And Sheep Rumen	MLYKRYEYWSKEGKKWTNWFLWDSNLKPELQMEDKRIFCRLKNEYKEI
Ga0224482_102404851	3300021426	Cattle And Sheep Rumen	MTYKRYEYWTAFGKKWTKWFPWNSDYKPELQIDNHRIFSRLKNEYKSI
Ga0224423_104120732	3300021431	Cattle And Sheep Rumen	MTYKRYEYWSKKGKVWTDWFKWDSDYRPELQMDDKRIFCRLRNEYKVVSDQPSD
Ga0224423_106250944	3300021431	Cattle And Sheep Rumen	MTYKRYEYWTASGKKWTKWFPWNSEYKPEFQIDDHRIF
Ga0214517_1082272	3300021540	Goat Feces	MEVNINNMIYKRYEYLSSKGKVWTKWFKWNSDLRPELQMDDRRIINRLKNEYKEV
Ga0255060_103018651	3300024337	Rumen	KRYQYWSKDGLKWTDWFDWDSDYMPELQMDDRRVFCRLKNEYKDV
Ga0255060_103791471	3300024337	Rumen	MKKRYQYWSKDGLKWTDWFDWNSDFMPELQMDDRRIFCRLKNEYKED
Ga0255061_100236207	3300024342	Rumen	MIYKRYQYWSSEGLVWTEWFEWDSSLRPELQLDDRRIFCRLKNEYKEV
Ga0255061_107083142	3300024342	Rumen	ILFGSTMQKRYQYWSKDGLKWTDWFDWDSDFMPELQMDDRRIFCRLKNEYRED
Ga0255062_100002153	3300024345	Rumen	MIYKRYEYWSNEGKKWTKWFKWNSNLKPEFQMEDRRIFCRLKNEYKDEKDLCTNC
Ga0255062_100550205	3300024345	Rumen	MTYKRYEYWSNKGKILTDWFPWDSDWKPDLQIDDRRIFCRLKNEYKDEKGLCTNS
Ga0255062_100621273	3300024345	Rumen	MTYKRYEYWTASGKQWTKWFPWNSDYKPELQIDDRRIFCRLKNEYKDI
Ga0255062_104907002	3300024345	Rumen	MTYKRYEYWSSKGKVWTNWFEWDTDLKPELQMDDKRIFCRLKNEYK
Ga0255059_104656952	3300024486	Rumen	MKKRFEYWSKEGKVWTDWFDWDTNWKPELQLDDRRVFCRLKNEYKDEKGLYTNC
Ga0256870_10097895	3300026525	Rumen	MTLKRYEYWSKEGKVWTDWFPWNCDLKPELQMDDRRIFCRLKNEYKDV
Ga0256869_100558017	3300026526	Rumen	MIYKRYEYWSKEGKVWTNWFNWNSDLKPELQMDDKRVFCKLKNEYK
Ga0256872_101524992	3300026539	Rumen	MIYKRYEYWSREGKKFTDWFKWNSDYKPELQMNDKRIFCRLKNEYKNESIYSNCR
Ga0256405_1003801111	3300028048	Rumen	MMIYKRYEYWSSEGKKLTEWFEWDTDYKPELQLTDRRIISRLKNEYKDEKDLC
Ga0247611_1000194854	3300028591	Rumen	MIYKRYEYWSKEGKKFTDWFKWNSDYKPEFQMNDKRIFCRLKNEYENEKSVRSNC
Ga0247611_103926556	3300028591	Rumen	MIYKRYEYWSKEGKKFTDWFPWDSEWKPELQMDDRRIFCRLRNEYKVVSDQPSD
Ga0247611_118205462	3300028591	Rumen	LKWTDWFDWDSDYMPELQMDDRRVFCRLKNEYRDV
Ga0247608_101838557	3300028805	Rumen	YWSKDGLKWTDWFDWDTDFMPELQMDDRRIFCRLKNEYKED
Ga0265298_10000217110	3300028832	Rumen	MMTYKRYEYWTNEGKKWTEWFEWDSDLRPELQLTDRRIISRLKNEYREL
Ga0247610_100560294	3300028833	Rumen	MIYKRYEYWSSKGKVWTNWFPWNSDYKPELQMDDRRIINRLYNEYKEI
Ga0247610_1010074410	3300028833	Rumen	MMTYKRYEYWTSSGKQWSKWFPWNSDYKPELQMDDRRIFCRLKNEYK
Ga0247610_101320744	3300028833	Rumen	MTYKRFEYWSNKGKIWTDWFPWNSDWKPEFQMEDRRIINRLKNEYRDENSCFNN
Ga0247610_101330157	3300028833	Rumen	MLLYIQTIMTLKRYQYWTDEGKVWTNWFKWDSDLKPELQLTDRRINSRLFNEYKEV
Ga0247610_107200183	3300028833	Rumen	MIYKRYEYWSSKGKVWTEWFSWNSDYKPELQMDDRRIINRLYNEYKEK
Ga0256407_106223462	3300028886	Rumen	MTYKRYEYWSKEGKVWTDWFPWNSDIKPELQMDDRRIFCRLRNEYKEI
Ga0265299_103218242	3300028887	Rumen	MTYKRYEYWSKEGKVWTDWFPWNCNLKPELQMDDRRIFCRLKNEYKDV
Ga0265299_109324153	3300028887	Rumen	MTYKRYEYWSKEGKVWTDWFPWNSDIRPELQMDDRRIFCRLRNEYKDV
Ga0247609_1002198910	3300028888	Rumen	MKKRYQYWSKDGLKWTDWFDWDSDYMPELQMDDRRVFCRLKNEYKDV
Ga0247609_104603034	3300028888	Rumen	MTYKRYQYWSSEGLVWTEWFEWDSDLKPELQLDDRRIFCRLKNEYKDEKDLRTSS
Ga0247609_110633603	3300028888	Rumen	MIYKRYEYWSSEGKKWTDWFEWDSDYKPELQMNDKRIFCRLKNEYKDEKSLCTNC
Ga0247609_111239033	3300028888	Rumen	RYQYWTDEGKVWTNWFKWDSDLKPELQLTDRRINSRLFNEYKEV
Ga0247609_114726772	3300028888	Rumen	MQKRYQYWSKDGLKWTDWFDWDTDFMPELQMDDRRIFCRLKNEYKED
Ga0265300_1000027484	3300028914	Rumen	MTYKRYEYWSSKGKVWTDWFLWNSDYKPELQMNDRRIINRLRNEYEERN
Ga0061018_134052582	3300031085	Fungi-Associated Bovine Rumen	MTYKRYEYWSKEGKKFTKWFPWKSNWKPELQMNDKRIICRLFNEYKEDESICTDN
Ga0061018_139809824	3300031085	Fungi-Associated Bovine Rumen	MIYKRYEYWSNEGKKWTKWFEWNSDYKPELQLDDRRIFCRLKNEYK
Ga0326513_100683643	3300031760	Rumen	MTYKRYEYWTATGKQWTKWFPWNSDYKPEFQMDDHRIFCRLRNEYKDI
Ga0326513_102979122	3300031760	Rumen	MKKRYQYWSREGLKWTEWFDWDSDYMPELQMDDRRVFCRLKNEYKDD
Ga0326513_103220684	3300031760	Rumen	MIYKRYEYWSSEGKKWTEWFEWDSDLRPELQLTDRRIFSRLKNEYKEL
Ga0326513_106226452	3300031760	Rumen	MTYKRYEYWSKEGKVWTKWFPWNCDLKPELQMDDRRIFCRLKNEYKDV
Ga0326513_110697103	3300031760	Rumen	MKKRFEYWSKEGKVWTDWFDWDSDLRPELQMDDRRIFCRLKNEYKDEKNLRSNS
Ga0326513_113388113	3300031760	Rumen	MTYKRYQYWSSEGLVWTEWFEWDSDLRPELQLDDRRIFCRLKNEYKEI
Ga0326513_118436692	3300031760	Rumen	MTYKRYEYWSKEGKKFTKWFLWKSDWKPELQMNDKR
Ga0326514_100032353	3300031853	Rumen	MIYKRYEYWSREGKKWTDWFKWDSDIKPELQMTDRRIISRLKNEYKENN
Ga0326514_100621688	3300031853	Rumen	MKKRYQYWSREGLKWTDWFDWDSDYMPELQMDDRRVFCRLKNEYKDD
Ga0326514_101483998	3300031853	Rumen	MMIYKRYEYWSNEGKKWTEWFEWDSDLRPELQLTDRRIISRLKNEYKEL
Ga0326514_103571734	3300031853	Rumen	MIYKRYQYWSSEGKKWTDWFKWNSDLKPELQMDDRRIINRLYNEYKVVYDQPA
Ga0326514_103731652	3300031853	Rumen	MILKRYEYWSKEGKKWTDWFKWESDLKPEFQMDDKRIFCRLKNEYKEK
Ga0326514_104223713	3300031853	Rumen	MTYKRYEYWTSSGKQWSKWFPWNSDYKPELQMDDHRIFCRLKNEYKSI
Ga0326514_104270144	3300031853	Rumen	MIMQKRYQYWSKDGLVWTDWFDWDTDYMPEYQMEDRRIFCRLKNEYRDESKVC
Ga0326514_104834872	3300031853	Rumen	MKRYEYWSSKGKTWTDWFKWDSDYKPEFQINDKRIFCRLKNEYKDENIYTNS
Ga0326514_105571163	3300031853	Rumen	MVLKRYEYWSKEGKKWTDWFKWESDLKPELQMDDRRIFCRLRNEYKEN
Ga0326514_108909251	3300031853	Rumen	MTYKRYQYWSSEGKKWTDWFKWNSDLKPELQMDDRRIINRLYNEYKVVYDQPA
Ga0326514_110153193	3300031853	Rumen	MIYKRYEYWSREGKKWTNWFQWDSDLRPELQMNDKRIFCRLK
Ga0326514_111551252	3300031853	Rumen	MIYKRYEYWSSEGKKWTDWFEWNSDYKPELQMDDKRIFCRLRNEYKNEKSLCTNS
Ga0326514_112587591	3300031853	Rumen	MTYKRYEYWSSEGKKWTEWFEWDSDLRPELQLTDRRIISRL
Ga0326511_100220161	3300031867	Rumen	MTYKRYQYWSSEGKKWTDWFKWNSDLKPELQMDDRRIINRLYNEYKVVSDQPLIDR
Ga0326511_1003975411	3300031867	Rumen	MTLKRYEYWSKEGKKWTDWFPWESNLKPELQMDDRRVFCRLKNEYKEI
Ga0326511_100501455	3300031867	Rumen	MTYKRYEYWSKEGKVWTNWFPWNSDIKPELQMDDRRIFCRLKNEYKDVLE
Ga0326511_100570124	3300031867	Rumen	MTYKRYEYWAASGKKWTKWFPWNSEYKPEFQMDDHRIFCKLKNEYKNI
Ga0326511_101639806	3300031867	Rumen	MMIYKRYEYWSNEGKKWTEWFEWDSDLRPELQLTDRRIISRLKNEYKDEKGLCTNS
Ga0326511_104917073	3300031867	Rumen	MMIYKRYEYWSSEGKKWTEWFEWDSDLRPELQLTDRRIISRLKNEYKDEKGLRTNSR
Ga0326511_106317742	3300031867	Rumen	MVLKRYEYWSKEGKKWTDWFKWESSLKPEFQMDDRKIFCRLRNEYREEN
Ga0326511_109272322	3300031867	Rumen	MTYKRYEYWSKEGKVWTDWFPWNCDLKPELQMDDRRIFCRLKNEYKDV
Ga0326511_109984703	3300031867	Rumen	VEHLKQMLKRYEYWSKEGKKWTDWFEWDSDYCPELQLTDRRISSRLKNEYK
Ga0326511_110633412	3300031867	Rumen	MIYKRYEYWSSKGKVWTKWFSWDSDLRPELQLDDRRIFCKLKNEYREES
Ga0326511_111090993	3300031867	Rumen	RYEYWSSKGKVWTDWFDWNSDWKPEFQMNDKRVFCRLKNEYKEEL
Ga0326511_112716672	3300031867	Rumen	MTYKRYEYWTASGKQWTKWFLWNSDYKPELQMDDHRIFCRLKNEYKDI
Ga0326511_113452071	3300031867	Rumen	MKKRYQYWSREGLKWTDWFDWDSDYMPELQMDDRRVFCRLKNEYK
Ga0326511_113516622	3300031867	Rumen	GLKWTDWFDWDTDFMPELQMDDRRIFCRLKNEYKED
Ga0326511_118790862	3300031867	Rumen	MIYKRYEYWSREGKKWTNWFQWDSDLKPELQMNDKRIFCRLKNEY
Ga0326510_13046502	3300031961	Rumen	LLSCYQYWSKDGLKWTDWFDWDTDFKPELQMDDRRIFCRLKNEYKED
Ga0310694_108311902	3300031992	Rumen	MILKRYEYWSKEGKKWTDWFKWESNLKPEFQMDDKRIFCRLKNEYKVVSDQPS
Ga0310696_123371331	3300031993	Rumen	MTYKRYEYWSKEGKVWTDWFPWNSDIRPELQMDDRRIFCRLKNEYKDV
Ga0310691_120326052	3300031994	Rumen	MTYKRYEYWSKEGKVWSDWFPWDSDLRPELQMDDRRIFCRLRNEYREES
Ga0310786_113416763	3300031998	Rumen	SKEGKVWTNWFPWNSDLRPELQMDDRRIFCRLKNEYKDV
Ga0310786_124063953	3300031998	Rumen	EYWSKSGKTWTDWFPWDSDIRPELQLDDRRIFCRLKNEYKYESICTNS
Ga0326512_100111356	3300032038	Rumen	MILKRYEYWSKEGKKWTDWFKWESDLKPELQMDDRRIFCRLKNEYKEN
Ga0326512_1002166216	3300032038	Rumen	MIMTYKRYEYWSKEGKVWSDWFPWDSDLRPELQMDDRRIFCRLRNEYKDD
Ga0326512_100347947	3300032038	Rumen	MTLKRYEYWSKEGKKWTDWFPWESNLKPELQMDDRRIFCRLKNEYKEI
Ga0326512_1004190010	3300032038	Rumen	MTYKRYEYWSKEGKKFTYWFEWNSDLRPELQLTDRRIISRLKNEYKEL
Ga0326512_100967555	3300032038	Rumen	MTLKRYEYWSKEGKVWTDWFPWNCDLKPELQMDDRRIFCRLRNEYKDV
Ga0326512_101344714	3300032038	Rumen	MIYKRYEYWSNEGKKFTDWFIWDSDLRPELQMNDRRVINRLFNEYKEI
Ga0326512_101704395	3300032038	Rumen	MTYKRYEYWTASGKQWTKWFPWNSDYRPELQMDDHRIFCRLKNEYKDI
Ga0326512_102237594	3300032038	Rumen	MITFKRYEYWAKDGKKWTNWFEWKSDLKPEFQMDDKRIFCKLKNEYKDVLD
Ga0326512_102530271	3300032038	Rumen	MTYKRYEYWSREGKKWTDWFPWKSDIRPELQLTDRRIISRLYN
Ga0326512_103103396	3300032038	Rumen	MTYKRYEYWSSEGKKWTEWFEWDSDLRPELQLTDRRIISRLKNEYKEL
Ga0326512_103486615	3300032038	Rumen	KRYEYWSKEGKVWSDWFPWDSDLRPELQMDDRRIFCRLRNEYKDD
Ga0326512_104631682	3300032038	Rumen	MIYKRYEYWSKEGKVWTNWFPWNSDIKPELQMDDRRIFCRLKNEYKEI
Ga0326512_105836801	3300032038	Rumen	MIFKRYQYWSSKGLVWTTWFEWDSDYKPELQMDDRRIFCRLKNEYKVVSDQPLD
Ga0326512_105967022	3300032038	Rumen	MTYKRYEYWSNEGKKWTEWFEWNSDYKPEFQMNDRRIFCRLKNEYKDEKSLCTNR
Ga0326512_106786723	3300032038	Rumen	RYQYWSREGLKWTEWFDWDSDYMPELQMDDRRVFCRLKNEYKDD
Ga0326512_107053964	3300032038	Rumen	RYEYWSKEGKVWTDWFPWNCDLRPELQMDDRRIFCRLKNEYKDV
Ga0326512_108551793	3300032038	Rumen	MTYKRYQYWSSEGLVWTEWFEWDSDLRPELQLDDRRIFCRLKNEYK
Ga0310690_100072504	3300033463	Rumen	MIYKRYEYWSKEGKKWTDWFPWDSDLKPELQLSDRRIMSRLYNEYKNEDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093056

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences