NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F093153

Metagenome / Metatranscriptome Family F093153

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F093153
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 152 residues
Representative Sequence DPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Number of Associated Samples 83
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.94 %
% of genes near scaffold ends (potentially truncated) 83.02 %
% of genes from short scaffolds (< 2000 bps) 97.17 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(34.906 % of family members)
Environment Ontology (ENVO) Unclassified
(75.472 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(70.755 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 68.75%    β-sheet: 0.00%    Coil/Unstructured: 31.25%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005289|Ga0065704_10773307Not Available533Open in IMG/M
3300005330|Ga0070690_101471533Not Available549Open in IMG/M
3300005347|Ga0070668_102183834Not Available511Open in IMG/M
3300005353|Ga0070669_101874045Not Available524Open in IMG/M
3300005355|Ga0070671_101885535Not Available531Open in IMG/M
3300005365|Ga0070688_100278672Not Available1200Open in IMG/M
3300005367|Ga0070667_100661922Not Available964Open in IMG/M
3300005466|Ga0070685_11284835Not Available558Open in IMG/M
3300005549|Ga0070704_101100893Not Available721Open in IMG/M
3300005617|Ga0068859_102193486Not Available609Open in IMG/M
3300005618|Ga0068864_100723923Not Available973Open in IMG/M
3300005719|Ga0068861_100426732Not Available1182Open in IMG/M
3300005841|Ga0068863_101143700Not Available783Open in IMG/M
3300005843|Ga0068860_101471953Not Available702Open in IMG/M
3300005843|Ga0068860_102104857Not Available585Open in IMG/M
3300005843|Ga0068860_102716830Not Available513Open in IMG/M
3300009101|Ga0105247_10241028Not Available1232Open in IMG/M
3300009975|Ga0105129_105349Not Available749Open in IMG/M
3300009990|Ga0105132_104267Not Available985Open in IMG/M
3300009995|Ga0105139_1046130Not Available755Open in IMG/M
3300009995|Ga0105139_1107545Not Available538Open in IMG/M
3300010277|Ga0134093_1085033Not Available540Open in IMG/M
3300010373|Ga0134128_12790664Not Available538Open in IMG/M
3300010396|Ga0134126_10682413Not Available1169Open in IMG/M
3300010400|Ga0134122_10772524Not Available913Open in IMG/M
3300010401|Ga0134121_11055950Not Available801Open in IMG/M
3300012949|Ga0153798_10106644Not Available1268Open in IMG/M
3300015280|Ga0182100_1071755Not Available566Open in IMG/M
3300015301|Ga0182184_1077494Not Available552Open in IMG/M
3300015306|Ga0182180_1047292Not Available645Open in IMG/M
3300015310|Ga0182162_1108704Not Available538Open in IMG/M
3300015311|Ga0182182_1006342Not Available1295Open in IMG/M
3300015312|Ga0182168_1067704Not Available659Open in IMG/M
3300015312|Ga0182168_1067806Not Available659Open in IMG/M
3300015312|Ga0182168_1127633Not Available517Open in IMG/M
3300015316|Ga0182121_1131953Not Available525Open in IMG/M
3300015317|Ga0182136_1022128Not Available960Open in IMG/M
3300015317|Ga0182136_1107569Not Available560Open in IMG/M
3300015324|Ga0182134_1021187Not Available996Open in IMG/M
3300015324|Ga0182134_1030862Not Available886Open in IMG/M
3300015324|Ga0182134_1146290Not Available505Open in IMG/M
3300015330|Ga0182152_1110727Not Available576Open in IMG/M
3300015332|Ga0182117_1163166Not Available511Open in IMG/M
3300015334|Ga0182132_1113969Not Available595Open in IMG/M
3300015334|Ga0182132_1167732Not Available504Open in IMG/M
3300015348|Ga0182115_1190441Not Available658Open in IMG/M
3300015348|Ga0182115_1246785Not Available568Open in IMG/M
3300015348|Ga0182115_1292380Not Available515Open in IMG/M
3300015349|Ga0182185_1224457Not Available570Open in IMG/M
3300015353|Ga0182179_1204507Not Available629Open in IMG/M
3300015354|Ga0182167_1354260Not Available512Open in IMG/M
3300017408|Ga0182197_1063850Not Available699Open in IMG/M
3300017414|Ga0182195_1212934Not Available511Open in IMG/M
3300017421|Ga0182213_1036214Not Available1331Open in IMG/M
3300017432|Ga0182196_1028243Not Available895Open in IMG/M
3300017435|Ga0182194_1078900Not Available646Open in IMG/M
3300017439|Ga0182200_1082338Not Available642Open in IMG/M
3300017440|Ga0182214_1020758Not Available1274Open in IMG/M
3300017693|Ga0182216_1034903Not Available1014Open in IMG/M
3300017693|Ga0182216_1162762Not Available572Open in IMG/M
3300020031|Ga0182119_101218Not Available843Open in IMG/M
3300020223|Ga0182118_100860Not Available1147Open in IMG/M
3300025903|Ga0207680_11168531Not Available549Open in IMG/M
3300025910|Ga0207684_10813962Not Available789Open in IMG/M
3300025922|Ga0207646_11073911Not Available709Open in IMG/M
3300026088|Ga0207641_10859281Not Available899Open in IMG/M
3300026095|Ga0207676_12532632Not Available509Open in IMG/M
3300028049|Ga0268322_1000166Not Available2589Open in IMG/M
3300028051|Ga0268344_1000397Not Available1878Open in IMG/M
3300028051|Ga0268344_1004422Not Available852Open in IMG/M
3300028051|Ga0268344_1004623Not Available841Open in IMG/M
3300028051|Ga0268344_1012997Not Available625Open in IMG/M
3300028052|Ga0268300_1008226Not Available596Open in IMG/M
3300028053|Ga0268346_1000316Not Available2105Open in IMG/M
3300028054|Ga0268306_1000207Not Available2291Open in IMG/M
3300028054|Ga0268306_1001227Not Available1369Open in IMG/M
3300028054|Ga0268306_1005442Not Available887Open in IMG/M
3300028055|Ga0268338_1015506Not Available701Open in IMG/M
3300028056|Ga0268330_1061050Not Available507Open in IMG/M
3300028057|Ga0268352_1033495Not Available567Open in IMG/M
3300028058|Ga0268332_1001604Not Available1603Open in IMG/M
3300028058|Ga0268332_1004442Not Available1235Open in IMG/M
3300028058|Ga0268332_1005034Not Available1196Open in IMG/M
3300028064|Ga0268340_1001986Not Available1579Open in IMG/M
3300028064|Ga0268340_1067095Not Available553Open in IMG/M
3300028141|Ga0268326_1000488Not Available1374Open in IMG/M
3300028141|Ga0268326_1003962Not Available728Open in IMG/M
3300028142|Ga0268347_1003001Not Available1027Open in IMG/M
3300028152|Ga0268336_1017208Not Available604Open in IMG/M
3300028154|Ga0268341_1001510Not Available1254Open in IMG/M
3300028155|Ga0268349_1010404Not Available1332Open in IMG/M
3300028256|Ga0268304_1006213Not Available669Open in IMG/M
3300028262|Ga0268310_1001902Not Available1412Open in IMG/M
3300028262|Ga0268310_1005715Not Available1011Open in IMG/M
3300028380|Ga0268265_12191963Not Available559Open in IMG/M
3300028465|Ga0268301_102565Not Available653Open in IMG/M
3300028471|Ga0268323_1004511Not Available789Open in IMG/M
3300028471|Ga0268323_1016379Not Available551Open in IMG/M
3300028472|Ga0268315_1016831Not Available588Open in IMG/M
3300028473|Ga0268319_1015443Not Available580Open in IMG/M
3300028475|Ga0268327_1009913Not Available681Open in IMG/M
3300028477|Ga0268309_1000284Not Available1612Open in IMG/M
3300028526|Ga0268339_1014311Not Available564Open in IMG/M
3300028529|Ga0268311_1021600Not Available558Open in IMG/M
3300032466|Ga0214503_1186812Not Available646Open in IMG/M
3300032502|Ga0214490_1095832Not Available678Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere34.91%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere33.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere9.43%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.77%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated3.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.83%
Switchgrass DegradingEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009975Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010277Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 4_13_20_68_A1 metaGEngineeredOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012949Switchgrass enrichment cultures co-assemblyEngineeredOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015324Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015330Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017414Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017421Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017440Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300020031Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_31MAY2016_LD2 MGHost-AssociatedOpen in IMG/M
3300020223Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_31MAY2016_LD2 MGHost-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028049Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028051Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028052Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028053Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028054Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028055Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028056Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028057Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028064Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028141Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028142Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028152Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028154Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028155Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028256Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028262Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028465Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028471Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028472Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028473Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028475Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028477Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028526Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028529Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300032466Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0065704_1077330713300005289Switchgrass RhizosphereSSCNNVLLDFFATNTADPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPNLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH*
Ga0070690_10147153313300005330Switchgrass RhizosphereFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH*
Ga0070668_10218383413300005347Switchgrass RhizosphereFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMKEFMPQSLIRISRNHRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKQSKLVQLMQKFVPRCLIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0070669_10187404513300005353Switchgrass RhizosphereSTNAPDLHHWTLNSCFGVFVSVWVHMRLFRYFTKLGVKWSNLVQLMQKFVPLSLVRISQNESS*STQLDPKLMFSNVSFCLGAFGTASLPHKTRSKTGHLVQLIQKFVPGCLVRVILNERSRSTPLDPKLMFWCDSFCLGAFGTVSLLYETCYKTRQTGATNAKVRATMSCRNF
Ga0070671_10188553513300005355Switchgrass RhizosphereATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH*
Ga0070688_10027867243300005365Switchgrass RhizosphereCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTIPLLH*
Ga0070667_10066192223300005367Switchgrass RhizosphereVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPDVLLEIFATNAPDTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0070685_1128483513300005466Switchgrass RhizosphereDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0070704_10110089323300005549Corn, Switchgrass And Miscanthus RhizosphereLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH*
Ga0068859_10219348613300005617Switchgrass RhizosphereVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERS*STPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0068864_10072392333300005618Switchgrass RhizosphereVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTTMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0068861_10042673223300005719Switchgrass RhizosphereDPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERS*STPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0068863_10114370013300005841Switchgrass RhizosphereMNAPDPHHWTLNSCFGAFLSVWVHMEPFRYCTKLAAKRAKLVQLMQKFVQRCLVRFFRNECSRSTPLDPKLIFRCISFRLGAFGTISLLHKLDAKHSKLVQLVQKFVPRCLIRNFRNERSRSTPLEPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRN
Ga0068860_10147195333300005843Switchgrass RhizosphereLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTTMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0068860_10210485713300005843Switchgrass RhizosphereAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDTNLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNKRSRSTPMEPKLMFWCDSFHLGAFGTIPLLHKTCCKTRQTGAINAKV*
Ga0068860_10271683013300005843Switchgrass RhizosphereCNDVLLDFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFLYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH*
Ga0105247_1024102813300009101Switchgrass RhizosphereSSCNDVLLEFYATNAPDPHHWTINSFFSAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSNLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERS*STPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0105129_10534913300009975Switchgrass AssociatedMNAPDPHHWTLNSCFGAFLSVWVHMEPFRYCTKLAAKRAKLVQLMQKFVQRCLVRFFRNECSRSTPLDPKLIFRCISFRLGAFGTISLLHKLDAKHSKLVQLVQKFVPRCLIRNFRNERSRSTPLEPKLMF
Ga0105132_10426723300009990Switchgrass AssociatedLLEFFATNALDPHHWTLNSFFGAFISVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH*
Ga0105139_104613013300009995Switchgrass AssociatedKSSCNNVFLDFFATNTADPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFMRQSPIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNESSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0105139_110754513300009995Switchgrass AssociatedMLEFFATNTPDPYQWTLNSFFGALLSVWVHLEPFRYCTKLGAKWANLVQLMQGFVPQSIIRISRNGRSQSTQLDPKLMFSSISFCLGAFGTIILLHKLDAKHSKLVQLLQKFVPRCLFRNFRNERSRSTPLE
Ga0134093_108503313300010277Switchgrass DegradingHLEPFRYCTRLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERSRSTLLDHKLIFRCISFRLGAFGTISLLHETCCKMRQTGAINVKVRATKLSRNFS*
Ga0134128_1279066413300010373Terrestrial SoilLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0134126_1068241313300010396Terrestrial SoilLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH*
Ga0134122_1077252413300010400Terrestrial SoilAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERS*STPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0134121_1105595013300010401Terrestrial SoilEFFATNAPDPHHWTLNSFFGAFISVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH*
Ga0153798_1010664413300012949Switchgrass DegradingDPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQIMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERS*STPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0182100_107175513300015280Switchgrass PhyllosphereLLDFFATNAPDPHHRTLNSFFGAFLSVWVHLEPFCYCTKLGAKWANLVQLMQEYVPQSLIRISRNGRSRSTQLDTKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0182184_107749413300015301Switchgrass PhyllosphereFEPFRNCTKLGAKWANLVQLMQEFVPQSLIRISRNGHSRSTHLDSKLMFSCVSFSLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNKRSRSTPLEPKLMFWCYSFHLGAFGSVSLLH*
Ga0182180_104729213300015306Switchgrass PhyllosphereLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTIPLLH*
Ga0182162_110870413300015310Switchgrass PhyllospherePHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWAKLVQLMQEFVPQSLSRISRNGHSRSTHLDSKLMFSYVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLRAFGTVSLLH*
Ga0182182_100634213300015311Switchgrass PhyllosphereLLDFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRYCTRLGAKWANLVQLMQEFVPRCLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0182168_106770413300015312Switchgrass PhyllosphereSCNDVLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTIPLLH*
Ga0182168_106780613300015312Switchgrass PhyllosphereCKSSCNDVLLEFFATNAPDPHHWTLNSIFGVFLSVWVHMEPFHYCTKLGAKWANLVQLMQDFVPQSLIRIS*NRRSRSPQLDPKLMFSCVSFRLGAFGTIMLLHKLDAKCAKLVQLMQKFVPRCLVRNFRNKHSRSTLLEPKLMFWCISFHFGAFGTISLLH*
Ga0182168_112763313300015312Switchgrass PhyllosphereISVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRICRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH*
Ga0182121_113195313300015316Switchgrass PhyllospherePHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWAKLVQLMQEFVPQSLSRISRNGHSRSTHLDSKLMFSYVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRTTPLEPKLMFWCDSFHLRAFGTVSLLH*
Ga0182136_102212813300015317Switchgrass PhyllosphereSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERS*STPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0182136_110756913300015317Switchgrass PhyllosphereSSCNDVLLDFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMKEFMPQSLIRISRNHRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKQSKLVQLMQKFVPRCLIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVSLLH*
Ga0182134_102118713300015324Switchgrass PhyllosphereLLEFFTTNVPDPHHWTLNSFFCAFLSVSVHLEPFRYCTKLGANGANLVELMQEFVPQSLVRISRNRRTRSTQLDPELRFPCVSFRLGAFGTIMLLRKLDAKRAKLVQLMQKFVPRSLVRNFHNERSRSTTLESKLMFWCVSFCTKLGAKAPNWCN*
Ga0182134_103086213300015324Switchgrass PhyllosphereLLEFFATNAPDPHHWTLNSFFWCVSFCLGAFGTVSLLHETRCKWANLVQLMQEFVPHSLVRISRNRCSRSTQLVPMLLISYVSFRLGAFGTIMLLHKLDAKCAKLVQLMQKFVPRCLVRNFRNKRSRSTPLEYKLMFWCVSFHLGAFGTISLLHYTCCKTRQTGAINAKVRATMSC*
Ga0182134_114629013300015324Switchgrass PhyllosphereATNALDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLIRISRNGHS*STQLDTKHMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0182152_111072713300015330Switchgrass PhyllosphereEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRNYTKLGAKWANLVQLMQEFVPQSLIRISRNGHS*STQLDTKHMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRSFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0182117_116316613300015332Switchgrass PhyllosphereSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTTMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0182132_111396913300015334Switchgrass PhyllospherePHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERS*STPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC*
Ga0182132_116773213300015334Switchgrass PhyllosphereLDFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRYCTRLGAKWANLVQLMQEFVPRCLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH*
Ga0182115_119044123300015348Switchgrass PhyllosphereVFLSVWVHLEPFHYSTKLGAKWANLVQLMQDFVPQSLIRISRNGRSRSTQLDPKLMFSCVSFRLGAFGTIMLLHKLDAKCAKLVQLMQKFVPRCLVRNFRNKHSQSTLLEPKLMFWCISFHLGAFGTISLLR*
Ga0182115_124678513300015348Switchgrass PhyllosphereATNAPDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWAKLVQLMQEFVPQSLSRISRNGHSRSTHLDSKLMFSYVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLRAFGTVSLLH*
Ga0182115_129238013300015348Switchgrass PhyllosphereLLDFFATNAPDPHHRTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEYVPQSLIRISRNGRSRSTQLDPKLTFSCVSFCLGAFGTIMLLHKLDAKDSKLVQLMQKFVPRCIIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTV
Ga0182185_122445713300015349Switchgrass PhyllospherePNWCNYCKTSCNDVLLKFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLDAKWAKLVQLMQEFVPQSLSRISRNGHSRSTHLDSKLMFSYVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRFTPLEPKLMFWCDSFHLRAFGTVSLLH*
Ga0182179_120450713300015353Switchgrass PhyllosphereMLEFFATNTPDPYQWTLNSFFGALLSVWVHLEPFRYCTKLGAKWANLVQLMQGFVPQSLIRISRNGRSQSTQLDPKLMFSSISFCLGAFGTIILLHKLDAKHSKLVQLLQKFVPRCLFRNFRNERSRSTPLETKLMFWCDSFHLGAF
Ga0182167_135426013300015354Switchgrass PhyllosphereSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPKLMFSCISFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRIFCNERSRSTPLEPKLMFWCDSFHLGAFGTVSLLH*
Ga0182197_106385013300017408Switchgrass PhyllosphereLDRFATARNLVQNAPNWCNYCKTSCNDVLLEFFATNALDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCYSFHLGAFGTVSLLH
Ga0182195_121293413300017414Switchgrass PhyllosphereSSCNDVLLDFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMKEFMPQSLIRISRNHRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKQSKLVQLMQKFVPRCLIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVSLLH
Ga0182213_103621423300017421Switchgrass PhyllosphereSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERSXSTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC
Ga0182196_102824313300017432Switchgrass PhyllosphereMNAPDPHHWTLNSCFGAFLSVWVHMEPFRYCTKLAAKRAKLVQLMQKFVQRCLVRFFRNECSRSTPLDPKLIFRCISFRLGAFGTISLLHKLDAKHSKLVQLVQKFVPRCLIRIFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0182194_107890013300017435Switchgrass PhyllosphereCKSSCHDVLLEFFATNTPDPHHWTLNSIFGVFLSVWVHMEPFHYCTKLGAKWANLVQLMQDFVPQSLIRISXNRRSXSPQLDPKLMFSCVSFRLGAFGTIMLLHKLDAKCAKLVQLMQKFVPRCLVRNFRNKHSRSTLLEPKLMFWCISFHLGAFGTISLLH
Ga0182200_108233813300017439Switchgrass PhyllosphereLLELFLTNAPDPHNWTLNSCFGVFVSVWVHMGLFCYCTKLGAKWANLVQLMQIFVPQSLVRISQNKCSRSTQLDPKLMFLYVSFPLGAFGTVFLLHETRCKMGQLVQLMQKFVPQSLVRISRNLRSRSTQLDPKLMFSCISFRLGAFRTASLPHKTRSKMGQTGA
Ga0182214_102075813300017440Switchgrass PhyllosphereCKSSCNDVLLEFFATNAPDPHHWTLNSIFGVFLSVWVHMEPYHYCTKLGAKWANLVQLMQDFVPQSLIRISXNRRSRSPQLDPKLMFSCVSFRLGAFGTIMLLHKLDAKCAKLVQLMQKFVPRCLVRNFRNKHSRSTLLEPKLMFWCISFHLGAFGTISLLH
Ga0182216_103490313300017693Switchgrass PhyllosphereDPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERSXSTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC
Ga0182216_116276213300017693Switchgrass PhyllosphereLLEFFATNAPDPHHWTLNSFFGAFLSVWLHLEPFRNCTKLGAKWANLVQLMQEFVPQSLIRISRNGHSXSTQLDTKHMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCYSFHLGAFGTVSLLH
Ga0182119_10121813300020031Switchgrass PhyllosphereARSRSTPLDPKLIFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0182118_10086013300020223Switchgrass PhyllosphereKSSCNDVLLEFFATNAPDPHHWTLNSFFGVFLSVWVHMEPFHYCTKLGAKWANLVQLMQDFVPQSLIRISXNRRSRSPQLDPKLMFSCVSFRLGAFGTIMLLHKLDAKCAKLVQLMQKFVPRCLVRNFRNKHSRSTLLEPKLMFWCISFHLGAFGTISLLH
Ga0207680_1116853113300025903Switchgrass RhizosphereALDPHHWTLNSFFGAFISVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0207684_1081396213300025910Corn, Switchgrass And Miscanthus RhizospherePDPHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERSXSTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC
Ga0207646_1107391113300025922Corn, Switchgrass And Miscanthus RhizosphereWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERSXSTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC
Ga0207641_1085928113300026088Switchgrass RhizosphereLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0207676_1253263213300026095Switchgrass RhizosphereTNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH
Ga0268322_100016623300028049PhyllosphereLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERSXSTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC
Ga0268344_100039723300028051PhyllosphereLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH
Ga0268344_100442213300028051PhyllosphereMNAPDPHHWTLNSCFGAFLSVWVHMEPFRYCTKLAAKRAKLVQLMQKFVQRCLVRFFRNECSRSTPLDPKLIFRCISFRLGAFGTISLLHKLDAKHSKLVQLVQKFVPRCLIRNFRNERSRSTPLEPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFV
Ga0268344_100462323300028051PhyllosphereATARNLVQNAPNWCNSCKTSCNDVLLEFFATNALDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLIRISRNGHSXSTQLDPKLMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268344_101299713300028051PhyllosphereLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268300_100822613300028052PhyllosphereSTPLDPKLIFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0268346_100031633300028053PhyllosphereRFFPFGCILDRFATARNLVQNAPNWCNSCKTSCNDVLLEFFATNALDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLIRISRNGHSXSTQLDPKLMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRSFRNERSRSTPLEPKLMFWCDSSHLGAFGTVPLLH
Ga0268306_100020723300028054PhyllosphereLLEFFATNALDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0268306_100122733300028054PhyllosphereFGAFLSVWVHLEPFLYCTKLGAKWANLVQLMQECMPQSLIRISRNGRSRSTQWDPKLMFSCISFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268306_100544223300028054PhyllosphereMNAPDPHHWTLNSCFGAFLSVWVHMEPFRYCTKLAAKHAKLVQLMQKFVQRCLVRFFRNECSRSTPLDPKLIFRCISFRLGAFGTISLLHKLDAKHSKLVQLVQKFVPRCLIRNFRNERSRSTPLEPKLMFSCVSFCLGAFGTIMLLHKLDAKH
Ga0268338_101550613300028055PhyllospherePFGCILDRFATARNLVQNAPNWCNSCKTSCNDVLLEFFATNALDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268330_106105013300028056PhyllosphereLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWRISFDLGAFGTISLLH
Ga0268352_103349513300028057PhyllosphereCNYCQSSCNDVLLDFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFLHCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDPNLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRKERS
Ga0268332_100160423300028058PhyllosphereFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISQNGCSRSTQLDPELMFSCVSFCLGAFGTIMLLHKLDAKYSKLVQLMQKFVPRCLIRIFRNERSRSTPLEPKLMFWCDSFHLGTFGTVPLLH
Ga0268332_100444213300028058PhyllosphereHLEPFRYCTKLGAKWANLVQLMQEFVQQSLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFMPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268332_100503413300028058PhyllosphereLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLDAKWANLVQLMQEFVPQSLIRISQNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTILLLH
Ga0268340_100198613300028064PhyllosphereLLDFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRYCTRLGAKWANLVQLMQEFVPRCLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268340_106709513300028064PhyllosphereLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH
Ga0268326_100048823300028141PhyllosphereQKFVPRCFLVEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFRNYTKLGAKWANLVQLMQEFVPQSLIRISRNGHSXSTQLDTKHMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCYSFHLGAFGTVSLLH
Ga0268326_100396213300028141PhyllosphereVVLLEFFATNALDPHHWTLNSFFGAFISVWVHLVPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0268347_100300113300028142PhyllosphereSSCNDVLLNFFATNAPDPHHRTLNSFFGAFLSVWVHLEPFCYCTKLGAKWANLVQLMQEYVPQSLIRISRNGRSRSTQLDTKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNKRSRSTPMEPKLMFWCDSFHLGAFGTIPLLHKTCCKTRQTGAINAKV
Ga0268336_101720813300028152PhyllosphereLVQNAPNWCNYCKTSCNDVLLKIFTTNAPDPHHWTLNSFFGAFLSVWVHLEPFRNCTKLGAKWANLVQLMQEFVPQSLNRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLLHKLDAKHSKLVQLMQKFVPRCLIRNFRNERSRSTPLEPKLMFWCYSFHLGAFGTVSLLH
Ga0268341_100151013300028154PhyllosphereFATNSPDPHHWTLNSFFGAFISVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0268349_101040413300028155PhyllospherePHHWTLNSFFGAFLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFMPRCLIRNFRNERSXSTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC
Ga0268304_100621313300028256PhyllosphereLSVWVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268310_100190213300028262PhyllosphereMNAPDPHHWTLNSCFGAFLSVWVHMEPFRYCTKLAAKRAKLVQLMQKFVQRCLVRFFRNECSRSTPLDPKLIFRCISFRLGAFGTISLLHKLDAKHSKLVQLVQKFVPRCLIRNFRNERSRSTPLEPKLMFS
Ga0268310_100571513300028262PhyllosphereHHWTLNTFFGAFLSVWVHLEPFRYCTRLGAKWANLVQLMQEFVPRCLIRISRNGRSRSTQLDTKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLVQKFVPRCHIRNFRNECSRSTPLEPKLMFWCDSFHLGAFGTVPLLH
Ga0268265_1219196313300028380Switchgrass RhizosphereDPHHWTLNSFFGAFISVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTPLDPKHMFWCVSFRSGAFWTVSLLHETWCKTCRTGAINAKVRATMSC
Ga0268301_10256513300028465PhyllosphereLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTILLLH
Ga0268323_100451123300028471PhyllosphereMQKFVQRCLVRIFRNERSRSTPLDPKLIFGAFISVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0268323_101637913300028471PhyllosphereKSSCNDVLLEFFTTNAPDPHHWTLNSFFGVFLTVWVHLEPFHYCTKLGAKWANLVQLMQEFVPQSLIRISQNGRSRSTQLDPKLLFSCVSFRLGAFGTIMLLHKLDAKCAKLVQLMQKFVPRCLFRNFRNKHSRSTLLEPQLMFWCILFHLGAFGTISLLH
Ga0268315_101683113300028472PhyllosphereLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTIS
Ga0268319_101544313300028473PhyllosphereCKSSCNVVLLEFFATNALDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0268327_100991313300028475PhyllosphereLFEFFATNALDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEPKLMFWCISFDLGAFGTISLLH
Ga0268309_100028413300028477PhyllosphereLLEFFATNAPDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHSGAF
Ga0268339_101431113300028526PhyllospherePDPHHWTLNSFFGAFLSVWVHLEPFHYCTKLCANWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTLLEPKLMFWCISFHLGAFGTISLLH
Ga0268311_102160013300028529PhyllosphereLHKLDAKHAKLVQLMQKFMPQSLVIISRNRRSRSTQLDPKLMFSCVSFRLGAFGTIMLLHKLDAKHAKLVQLMQKFMPRGLVRNFCNERSRSTPLESTLMFWCVSFQYGCICNRFVTALNILQNAPNWCN
Ga0214503_118681213300032466Switchgrass PhyllosphereMQKYVPLCLFIIFATNAPDPHYWTLNSFFGAFLSVWVHLEPFHYCTKLCAKWANLVQLMQEFVPQSLFRISRNGRSRSTQLDPKLMFSCVSFFLGAFGTIMLLHKLDAKHSKLVQLMQKFVPRCHIRNFRNERSQSTLLEP
Ga0214490_109583213300032502Switchgrass PhyllosphereVHLEPFRYCTKLGAKWANLVQLMQEFVPQSLIRISRNGCSRSTQLDSKLMFSCVSFCLGAFGTIMLLHKLDAKHSKLVQLIQKFVPRCLIRNFRNERSRSTPLEPKLMFWCDTFHLGAFGTVPLLHETCCKMRQTGAINAKLRDTMSC


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.