NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093175

Metagenome / Metatranscriptome Family F093175

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093175
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 80 residues
Representative Sequence MDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWILMDESVEVEDPLQPVPVVTPELLEPGVADRHWPTKPRP
Number of Associated Samples 90
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 93.40 %
% of genes near scaffold ends (potentially truncated) 18.87 %
% of genes from short scaffolds (< 2000 bps) 69.81 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.019 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.868 % of family members)
Environment Ontology (ENVO) Unclassified
(40.566 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(38.679 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 28.18%    Coil/Unstructured: 71.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF11638DnaA_N 57.55
PF00487FA_desaturase 6.60
PF17167Glyco_hydro_36 3.77
PF08352oligo_HPY 3.77
PF00903Glyoxalase 2.83
PF00313CSD 0.94
PF13539Peptidase_M15_4 0.94
PF01391Collagen 0.94
PF00308Bac_DnaA 0.94
PF01425Amidase 0.94
PF01883FeS_assembly_P 0.94
PF00528BPD_transp_1 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 6.60
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 6.60
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 0.94
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 0.94
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.02 %
UnclassifiedrootN/A16.98 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002886|JGI25612J43240_1070479All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300003995|Ga0055438_10019633All Organisms → cellular organisms → Bacteria1516Open in IMG/M
3300004058|Ga0055498_10079095All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300004145|Ga0055489_10044990All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300004156|Ga0062589_100087262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia1930Open in IMG/M
3300004463|Ga0063356_100018935All Organisms → cellular organisms → Bacteria → Proteobacteria6395Open in IMG/M
3300005204|Ga0068997_10003459All Organisms → cellular organisms → Bacteria → Proteobacteria1887Open in IMG/M
3300005204|Ga0068997_10139699Not Available551Open in IMG/M
3300005294|Ga0065705_11110894Not Available507Open in IMG/M
3300005295|Ga0065707_10467883All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300005295|Ga0065707_10716052All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium633Open in IMG/M
3300005295|Ga0065707_10731085All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300005549|Ga0070704_100012374All Organisms → cellular organisms → Bacteria → Proteobacteria5270Open in IMG/M
3300009038|Ga0099829_10000147All Organisms → cellular organisms → Bacteria34884Open in IMG/M
3300009053|Ga0105095_10145485Not Available1293Open in IMG/M
3300009078|Ga0105106_10411823All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300009087|Ga0105107_10766222All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium671Open in IMG/M
3300009090|Ga0099827_10219080All Organisms → cellular organisms → Bacteria1589Open in IMG/M
3300009147|Ga0114129_10144731All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3256Open in IMG/M
3300010399|Ga0134127_10020189All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium5149Open in IMG/M
3300010403|Ga0134123_12548838Not Available578Open in IMG/M
3300011406|Ga0137454_1004981All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1337Open in IMG/M
3300011442|Ga0137437_1246804Not Available617Open in IMG/M
3300011443|Ga0137457_1169649All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300012035|Ga0137445_1008817All Organisms → cellular organisms → Bacteria1752Open in IMG/M
3300012355|Ga0137369_10142124All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1915Open in IMG/M
3300012685|Ga0137397_10034298All Organisms → cellular organisms → Bacteria3622Open in IMG/M
3300012929|Ga0137404_10046215All Organisms → cellular organisms → Bacteria3312Open in IMG/M
3300012929|Ga0137404_10409800All Organisms → cellular organisms → Bacteria1197Open in IMG/M
3300012930|Ga0137407_10117445All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2306Open in IMG/M
3300013100|Ga0157373_10559793All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300014873|Ga0180066_1018231Not Available1270Open in IMG/M
3300014884|Ga0180104_1132228All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium727Open in IMG/M
3300014885|Ga0180063_1051814All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300014885|Ga0180063_1074108All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1010Open in IMG/M
3300015245|Ga0137409_10053748All Organisms → cellular organisms → Bacteria → Proteobacteria3817Open in IMG/M
3300015254|Ga0180089_1007575All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1837Open in IMG/M
3300015264|Ga0137403_10011219All Organisms → cellular organisms → Bacteria9887Open in IMG/M
3300017997|Ga0184610_1000745All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium7415Open in IMG/M
3300018000|Ga0184604_10000228All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium5240Open in IMG/M
3300018028|Ga0184608_10005998All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3950Open in IMG/M
3300018031|Ga0184634_10029799Not Available2151Open in IMG/M
3300018052|Ga0184638_1245881All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium617Open in IMG/M
3300018054|Ga0184621_10148778All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium843Open in IMG/M
3300018054|Ga0184621_10279655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300018063|Ga0184637_10005523All Organisms → cellular organisms → Bacteria7705Open in IMG/M
3300018063|Ga0184637_10771230All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium516Open in IMG/M
3300018070|Ga0184631_10132915All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium993Open in IMG/M
3300018074|Ga0184640_10136994All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300018076|Ga0184609_10066804All Organisms → cellular organisms → Bacteria1567Open in IMG/M
3300018422|Ga0190265_10012805All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis6396Open in IMG/M
3300018422|Ga0190265_10025817All Organisms → cellular organisms → Bacteria4785Open in IMG/M
3300018422|Ga0190265_10585975All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300018429|Ga0190272_10033822All Organisms → cellular organisms → Bacteria2803Open in IMG/M
3300018469|Ga0190270_13199254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300019255|Ga0184643_1212094Not Available982Open in IMG/M
3300019279|Ga0184642_1339097All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300019360|Ga0187894_10063191All Organisms → cellular organisms → Bacteria2104Open in IMG/M
3300019458|Ga0187892_10013838All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium9191Open in IMG/M
3300019487|Ga0187893_10411545All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300019879|Ga0193723_1018020All Organisms → cellular organisms → Bacteria2180Open in IMG/M
3300019879|Ga0193723_1036616All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300019882|Ga0193713_1012852All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2527Open in IMG/M
3300019883|Ga0193725_1001791All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium6199Open in IMG/M
3300019886|Ga0193727_1083102Not Available969Open in IMG/M
3300020001|Ga0193731_1164673All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium535Open in IMG/M
3300020003|Ga0193739_1000257All Organisms → cellular organisms → Bacteria14841Open in IMG/M
3300020060|Ga0193717_1064166All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300020063|Ga0180118_1286803All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300020063|Ga0180118_1367058All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1027Open in IMG/M
3300022195|Ga0222625_1146904Not Available580Open in IMG/M
3300022694|Ga0222623_10382665Not Available536Open in IMG/M
3300025324|Ga0209640_10003606All Organisms → cellular organisms → Bacteria13530Open in IMG/M
3300025549|Ga0210094_1102879Not Available542Open in IMG/M
3300025580|Ga0210138_1179411Not Available520Open in IMG/M
3300025935|Ga0207709_10195572All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1440Open in IMG/M
3300025955|Ga0210071_1010011All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300026047|Ga0208658_1017937All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium577Open in IMG/M
3300026285|Ga0209438_1001439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. BNC17842Open in IMG/M
3300026351|Ga0257170_1017729All Organisms → cellular organisms → Bacteria920Open in IMG/M
3300026535|Ga0256867_10044302Not Available1818Open in IMG/M
3300027650|Ga0256866_1124345All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300027731|Ga0209592_1075739All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300027815|Ga0209726_10031660All Organisms → cellular organisms → Bacteria4093Open in IMG/M
3300027815|Ga0209726_10126727All Organisms → cellular organisms → Bacteria1475Open in IMG/M
3300027862|Ga0209701_10003931All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium9773Open in IMG/M
3300028536|Ga0137415_10153813All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2136Open in IMG/M
3300028715|Ga0307313_10047210All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1256Open in IMG/M
3300028787|Ga0307323_10132832All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium897Open in IMG/M
3300028792|Ga0307504_10368496Not Available558Open in IMG/M
3300030006|Ga0299907_10155146Not Available1893Open in IMG/M
3300030620|Ga0302046_10295990All Organisms → cellular organisms → Bacteria1331Open in IMG/M
(restricted) 3300031150|Ga0255311_1002348All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium3527Open in IMG/M
(restricted) 3300031150|Ga0255311_1019193All Organisms → cellular organisms → Bacteria1404Open in IMG/M
(restricted) 3300031150|Ga0255311_1093008Not Available650Open in IMG/M
(restricted) 3300031197|Ga0255310_10020541All Organisms → cellular organisms → Bacteria1699Open in IMG/M
3300031229|Ga0299913_10345217All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1476Open in IMG/M
3300031720|Ga0307469_10237854All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300031720|Ga0307469_10363364All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1221Open in IMG/M
3300031740|Ga0307468_100044694All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2257Open in IMG/M
3300032180|Ga0307471_100371917All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300032180|Ga0307471_100407214Not Available1489Open in IMG/M
3300033233|Ga0334722_10100567All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2197Open in IMG/M
3300033513|Ga0316628_102278938All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium717Open in IMG/M
3300033813|Ga0364928_0044673All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium961Open in IMG/M
3300034155|Ga0370498_023740All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1310Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment11.32%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.38%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil8.49%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands7.55%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment4.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.72%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.77%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere3.77%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil3.77%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.89%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.89%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.94%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.94%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.94%
Bio-OozeEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze0.94%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.94%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.94%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005204Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011406Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011443Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2EnvironmentalOpen in IMG/M
3300012035Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT338_2EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018070Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019458Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaGEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020003Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2EnvironmentalOpen in IMG/M
3300020060Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2EnvironmentalOpen in IMG/M
3300020063Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025549Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025580Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025955Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026047Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026351Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-BEnvironmentalOpen in IMG/M
3300026535Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)EnvironmentalOpen in IMG/M
3300027650Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeqEnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033813Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17EnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25612J43240_107047923300002886Grasslands SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVPMDEIVEIGEPLEPTVTTAPESIDR
Ga0055438_1001963333300003995Natural And Restored WetlandsMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMAESLETEDPVPPAPVPELLEPGVAARRWPVKPHP*
Ga0055498_1007909513300004058Natural And Restored WetlandsMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWALMDESVESEDAPQAPITAPERIEALVPER
Ga0055489_1004499023300004145Natural And Restored WetlandsMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGDPLQPVAVSGPEPLEPGVPERHWPTKPRP*
Ga0062589_10008726223300004156SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHETLGSPVAERPWPTKPRP*
Ga0063356_10001893523300004463Arabidopsis Thaliana RhizosphereMDGLRQIQVITQGDGWHLVGLDAEGQCWFGSPRRTAKGRRIAWVLMEESVESEEPPPTTIPEPLDHGGTGRAWPTKPRP*
Ga0068997_1000345923300005204Natural And Restored WetlandsMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMAESMEAEDPVPPAPAPELLEPGVAARRWPAKPHP*
Ga0068997_1013969923300005204Natural And Restored WetlandsMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWALMDESVESEDAPQAPITAPERIEALVPERHWPTKPRA*
Ga0065705_1111089423300005294Switchgrass RhizosphereMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVVMDESVEIADPLEPAVTASSESLERGVPERHWPAKPRP*
Ga0065707_1046788323300005295Switchgrass RhizosphereMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVVMDESVEIADPLEPAVTAASESLERGVPERHWPAKPRP*
Ga0065707_1071605213300005295Switchgrass RhizosphereMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPISIATSASLEPGVADRHWPVKPRA*
Ga0065707_1073108513300005295Switchgrass RhizosphereMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHETIESPVAERHWPTKPRP*
Ga0070704_10001237473300005549Corn, Switchgrass And Miscanthus RhizosphereMDGLRQIQVVTQGDGWHFVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPISIATSASLEPGVADRHWPVKSRP*
Ga0099829_10000147333300009038Vadose Zone SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAKPRS*
Ga0105095_1014548523300009053Freshwater SedimentMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGDPLQPAAVSGPEPLEPGVPERHWPTKPRP*
Ga0105106_1041182333300009078Freshwater SedimentTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGDPLQPAAVSGPEPLEPGVPERHWPTKPRP*
Ga0105107_1076622213300009087Freshwater SedimentMEGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWIMMDESVEVEDPLQAVPVVTPELLEPGVADRHWPTKPRP*
Ga0099827_1021908023300009090Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMNESVEVEDPSPPISIATSESLEPGMAERHWPVKPRP*
Ga0114129_1014473153300009147Populus RhizosphereMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPISIATSASLEPSVADRHWPVKPRP*
Ga0134127_1002018913300010399Terrestrial SoilMDGLRQIQVITQGDGWHLVGLDAEGQCWFGSPRRTAKGRRIAWVLMEESLESEEPSPTMNPEPLDQGVAGRP
Ga0134123_1254883813300010403Terrestrial SoilMDGLRQIQVITQGDGWHLVGLDAEGQCWFGSPRRTAKGRRIAWVLMEESVESEEPPPTTIPEPRDHGGTGRAWPTKPRP*
Ga0137454_100498113300011406SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAKPRP*
Ga0137437_124680423300011442SoilMEGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWIMMDESVEVEDPLQPVPVVTPELLEPGVADRHWPTKPRP*
Ga0137457_116964913300011443SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEE
Ga0137445_100881723300012035SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTMTPEPLEEGLAGRPWPAAKPRP*
Ga0137369_1014212423300012355Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMDESVEVDDPLQPASIATSGPLEPGVADRHWPAKPRC*
Ga0137397_1003429853300012685Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWILMDESVEVEDPSPPTSIATSGSLEPGVADRHWPVKARP*
Ga0137404_1004621553300012929Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPISIATSASLEPGVADRHWPVKPRP*
Ga0137404_1040980023300012929Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWILMDESVEVEDPSPPTSSATSGSLEPGVADRHWPAKARP*
Ga0137407_1011744543300012930Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWILMDESVEVEDPSPPTSSATSGSLEPGVADRHWPVKARP*
Ga0157373_1055979313300013100Corn RhizosphereMDGLRQIQVITQGDGWHLVGLDAEGQCWFGSPRRTAKGPRIAWVLMEESVESEEPPPTTIPEPLDHGGTGRAWPTKPRP*
Ga0180066_101823123300014873SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGAPRRTTKGRMLTWILMDESVESEEPPPTMTPEPLEEGLAGRPWPAA
Ga0180104_113222823300014884SoilMDGLRQIQVITQGDGWHLVGLDADGRVWFGSPRRTTKGRMLAWILMDESVETEDSLPPVPVAAPELLEPGVAERHWPTKPRP*
Ga0180063_105181423300014885SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLAWILMDESVESEEPPPTMTPEPLEEGLVGRPWPAKPRP*
Ga0180063_107410823300014885SoilMDGLRQIQVITQGDGWHLVGLDADGRVWFGSPRRTTKGRMLAWILMDESVETEDSLPPVPVAAPELLEPGVTERHWPTKPRP*
Ga0137409_1005374833300015245Vadose Zone SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVPMDEIVEIGEPLEPTVTTAPESIDRGVAARHWPVKPRP*
Ga0180089_100757533300015254SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWIPMDESVESEEPPPTITPEPLEEGLAGRPWPAAKPRP*
Ga0137403_1001121953300015264Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWILMDESVEVEDPSPPTSSATSGSLEPGVADRHWPVKPRP*
Ga0184610_100074563300017997Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAKPRP
Ga0184604_1000022853300018000Groundwater SedimentMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPTSIVTSESLEPGVADRHWPVKPRS
Ga0184608_1000599853300018028Groundwater SedimentMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDASPPTSILTSESLEPGVADRHWPVKPRS
Ga0184634_1002979913300018031Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTSTPEPLEEGRAGRPWPAAKPRP
Ga0184638_124588113300018052Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGRAGRPWPAAKPRP
Ga0184621_1014877813300018054Groundwater SedimentIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTSTPEPLEEGRAGRPWPAAKPRP
Ga0184621_1027965513300018054Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPTSIVTSESLEPGVADRHWPTKPRP
Ga0184637_1000552313300018063Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPSTMTPEPLEEGLARRPWPAARPRP
Ga0184637_1077123013300018063Groundwater SedimentIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRILTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAKPRP
Ga0184631_1013291523300018070Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITREPLEEGLAGRPWPAAKPRP
Ga0184640_1013699413300018074Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAAGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTMTPEPLEEGLAGRPWPAAKPRP
Ga0184609_1006680423300018076Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTSTPEPLEQGLAGRPWPAAKPRP
Ga0190265_1001280543300018422SoilMDGLRQIEVITQGDGWHLVGLDTEGRCWFGSPRRTAKGRRLTWVLMEESVESEEPPPTMTSEPLPEAAGRPWPTKPRP
Ga0190265_1002581753300018422SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHETLESPVAERHWPAKPRP
Ga0190265_1058597513300018422SoilMDGLRQIQVITQGDGWHLVGLDTEGRVWFGSPRRTTKGRMLAWILMDESVELEDPLQPASMVTPELLEPGVADRHWPTKPRP
Ga0190272_1003382253300018429SoilMEGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWIMMDESVEVEDPLQPVPVVTPELLEPGVADRHWPTKPRP
Ga0190270_1319925423300018469SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDASPPTSILTSESLEPGVADRHWP
Ga0184643_121209423300019255Groundwater SedimentMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSSPTSIVTSESLEPGVADR
Ga0184642_133909743300019279Groundwater SedimentMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPISIATSASLEPGVADRHWPVKSRP
Ga0187894_1006319123300019360Microbial Mat On RocksMDGLRQIQVITQGDGWHLVGLDADGRCWFGSPRRTTKGRMLAWVLMDESVESEEPPSTLSPEPLEKAAGRPWPAKPRP
Ga0187892_10013838113300019458Bio-OozeMDGLKQIQVITQGDGWHLVGLDADGRCWFGSPRRSTKGRMLAWVLMDESVESEEPPPTMTPEPLQEAAGRPWPTKPRP
Ga0187893_1041154513300019487Microbial Mat On RocksMDGLKQIEVITQGDGWHLVGLDADGRCWFGSPRRTTKGRMLAWVLMDESVESEEPLPTMPPEPLQEAAGRPWPTKPRP
Ga0193723_101802013300019879SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHETLESPVTERHWPTKPRP
Ga0193723_103661623300019879SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPTSIATSGSLEPGVADRHWPVKARP
Ga0193713_101285233300019882SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHETIESPVAERHWPTKPRL
Ga0193725_100179163300019883SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAKPRS
Ga0193727_108310223300019886SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPISIATSASLEPGVADRHWPVKPRP
Ga0193731_116467323300020001SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPTSIVTLESLEPGVADRHWPV
Ga0193739_1000257203300020003SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTSTPEPLEGGLAGRPWPAAKPRP
Ga0193717_106416623300020060SoilMEGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWIMMDESVEVEDPLQPVPVVTPELLEPGVADRHWPTKPRS
Ga0180118_128680323300020063Groundwater SedimentMDGLRQIQVITQGDGWHLVGLDADGRVWFGSPRRTTKGRMLAWILMDESVETEDSLPPVPVAAPELLEPGVTERHWPTKPRP
Ga0180118_136705823300020063Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLAWILMDESVESEEPPPTMTPEPLEEGLVGRPWPAKPRP
Ga0222625_114690423300022195Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGRAGRPWPAAKPRH
Ga0222623_1038266513300022694Groundwater SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAKARP
Ga0209640_1000360633300025324SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTAKGRMLAWILMDESVESEEPPPTMTPEPIEEGRVGRPWPAKPRP
Ga0210094_110287913300025549Natural And Restored WetlandsMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMAESLETEDPVPPAPVPELLEPGVAARRWPVKPHP
Ga0210138_117941113300025580Natural And Restored WetlandsRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMAESLETEDPVPPAPVPELLEPGVAARRWPVKPHP
Ga0207709_1019557223300025935Miscanthus RhizosphereMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHETLGSPVAERPWPTKPRP
Ga0210071_101001123300025955Natural And Restored WetlandsMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMAESMEAEDPVPPAPAPELLEPGVAARRWPAKPHP
Ga0208658_101793723300026047Natural And Restored WetlandsGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWALMDESVESEDAPQAPITAPERIEALVPERHWPTKPRA
Ga0209438_100143973300026285Grasslands SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVPMDEIVEIGEPLEPTVTTAPESIDRGVAGRHWPVKPRP
Ga0257170_101772913300026351SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAK
Ga0256867_1004430223300026535SoilMDGLRQIQVITQGDGWHLVGLDADGRVWFGSPRRTSNGRLLAWTLMDESVETEDPSPASPPETLAAGVAERHWPTKPRT
Ga0256866_112434523300027650SoilMDGLRQIQVITQGDGWHLVGLDADGRVWFGSPRRTSKGRLLAWTLMDESVETEDPSPASPPETLAAGV
Ga0209592_107573923300027731Freshwater SedimentMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGDPLQPAAVSGPEPLEPGVPERHWPTKPRP
Ga0209726_1003166093300027815GroundwaterMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTMTPEPLEEGLAGRPWPAAKPRP
Ga0209726_1012672723300027815GroundwaterMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTAKGRMLAWVLMDESVESEEPPPTMGPEPLEKVAGRPWPAKPRP
Ga0209701_1000393163300027862Vadose Zone SoilMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILMDESVESEEPPPTITPEPLEEGLAGRPWPAAKP
Ga0137415_1015381313300028536Vadose Zone SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWILMDESVEVEDPSPPTSIATSGSLEPGVADRHWPVKARP
Ga0307313_1004721023300028715SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPTSIVTSESLEPGVADRHWPVKPRP
Ga0307323_1013283213300028787SoilPMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWILMDESVEVEDPSPPTSIVTSESLEPGVADRHWPVKPRS
Ga0307504_1036849613300028792SoilMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWALMDESVEIGEPLEPTVATTPEAVERGVAERHWPVKPRP
Ga0299907_1015514623300030006SoilMDGLRQIQVITQGDGWHLVGLDADGRVWFGSPRRTSKGRLLAWTLMDESVETEDPSPASPPETLEAGVAERHWPTKPRT
Ga0302046_1029599023300030620SoilMDGLRQIQVITQGDGWHLVGLDASGRVWFGSPRRTSKGRVLAWTLMDESVETEDPSPDSTPETLAAAVAQPHWPTKPRT
(restricted) Ga0255311_100234823300031150Sandy SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGDPLQPVAVSGPEPLEPGVPERHWPAKPRP
(restricted) Ga0255311_101919323300031150Sandy SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIADPLEPAVTAASESLERGVAERHWPSKPRP
(restricted) Ga0255311_109300823300031150Sandy SoilMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMDESVETEDPLAPVAVSAPERLEPGVAD
(restricted) Ga0255310_1002054133300031197Sandy SoilMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMDESVETEDPLTPVAVSAPERLEPGVADRHWPTKRP
Ga0299913_1034521733300031229SoilMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTSKGRLLAWTLMDESVETEDPSPASPPETLEAGVAERHWPTKPRT
Ga0307469_1023785423300031720Hardwood Forest SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHEIESPVAERHWPTKPRP
Ga0307469_1036336423300031720Hardwood Forest SoilMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWALMDESVEVEDPLQPAPISTPELLDPGVADRPWPARPRP
Ga0307468_10004469443300031740Hardwood Forest SoilMEGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGEPLEPTALATHEPIESPVAERHWPTKSRP
Ga0307471_10037191723300032180Hardwood Forest SoilMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWALMDESVEVEDPLQPAPISTSELLEPGVADRPWPARPRP
Ga0307471_10040721413300032180Hardwood Forest SoilMHGLKQIEVIMQGDGWHLVGLDADGRVWFGSPRRTAKGRGLNWALMDESLETAGPSPSTGGPSETVEPPGDGVPRRPWPTKPGP
Ga0334722_1010056723300033233SedimentMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWVLMDESVETEDPLAPVAVSAPERLEPGVADRHWPTKRP
Ga0316628_10227893813300033513SoilMDGLRQIQVVTQGDGWHLVGLDAEGRVWFGSPRRTTKGRMLAWVLMDESVEIGDPLQPVAVSGPEPLEPGVPERHWPTKPRP
Ga0364928_0044673_226_4683300033813SedimentMDGLRQIEVITQGDGWHLVGLDAEGRCWFGSPRRTTKGRMLTWILLDESVESEEPPPTITPEPLEEGLAGRPWPAAKPRL
Ga0370498_023740_299_5473300034155Untreated Peat SoilMDGLRQIQVITQGDGWHLVGLDAEGRVWFGSPRRTAKGRMLAWILMDESVEVEDPLQPVPVVTPELLEPGVADRHWPTKPRP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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