Metagenome / Metatranscriptome Family F093248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093248
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	42 residues
Representative Sequence	MLTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLSFWWKGKSSI
Number of Associated Samples	7
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	16.98 %
% of genes from short scaffolds (< 2000 bps)	66.04 %
Associated GOLD sequencing projects	7
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.245 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.71% β-sheet: 0.00% Coil/Unstructured: 44.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07728	AAA_5	0.94
PF01663	Phosphodiest	0.94
PF12012	DUF3504	0.94
PF00370	FGGY_N	0.94
PF00078	RVT_1	0.94
PF00996	GDI	0.94
PF01477	PLAT	0.94
PF00059	Lectin_C	0.94
PF00656	Peptidase_C14	0.94
PF01762	Galactosyl_T	0.94
PF16360	GTP-bdg_M	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
All Organisms	root	All Organisms	20.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
cellular organisms	root	All Organisms → cellular organisms	20.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	20.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	20.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	16.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	16.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Cnidaria	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria	16.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Anthozoa	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	16.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Hexacorallia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	15.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Scleractinia	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	12.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	4.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Acroporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae	3.77 %
Pocilloporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Acropora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora	3.77 %
Pocilloporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.25 %
Acropora millepora	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	1.89 %
Pocilloporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300008006\|Ga0099819_1043960	Not Available	2070	Open in IMG/M
3300008006\|Ga0099819_1111114	Not Available	773	Open in IMG/M
3300008006\|Ga0099819_1130033	Not Available	1587	Open in IMG/M
3300008006\|Ga0099819_1180557	Not Available	598	Open in IMG/M
3300008015\|Ga0099816_1151784	Not Available	1809	Open in IMG/M
3300008015\|Ga0099816_1490898	Not Available	723	Open in IMG/M
3300008015\|Ga0099816_1535901	Not Available	709	Open in IMG/M
3300008016\|Ga0099818_1024437	Not Available	688	Open in IMG/M
3300008016\|Ga0099818_1050737	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	1382	Open in IMG/M
3300008030\|Ga0099821_1008970	All Organisms → cellular organisms → Eukaryota → Opisthokonta	757	Open in IMG/M
3300008030\|Ga0099821_1068633	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	4222	Open in IMG/M
3300008031\|Ga0099817_1164154	Not Available	585	Open in IMG/M
3300008033\|Ga0099820_1014317	Not Available	679	Open in IMG/M
3300008033\|Ga0099820_1040975	Not Available	591	Open in IMG/M
3300008033\|Ga0099820_1081808	Not Available	657	Open in IMG/M
3300008033\|Ga0099820_1152057	Not Available	1052	Open in IMG/M
3300008033\|Ga0099820_1582157	Not Available	864	Open in IMG/M
3300010032\|Ga0126336_10000027	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	28178	Open in IMG/M
3300010032\|Ga0126336_10001184	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	13027	Open in IMG/M
3300010032\|Ga0126336_10003349	All Organisms → cellular organisms → Eukaryota → Opisthokonta	9568	Open in IMG/M
3300010032\|Ga0126336_10003554	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	9379	Open in IMG/M
3300010032\|Ga0126336_10003841	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora	9132	Open in IMG/M
3300010032\|Ga0126336_10004367	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora	8756	Open in IMG/M
3300010032\|Ga0126336_10012009	Not Available	5924	Open in IMG/M
3300010032\|Ga0126336_10013373	Not Available	5661	Open in IMG/M
3300010032\|Ga0126336_10014490	Not Available	5467	Open in IMG/M
3300010032\|Ga0126336_10014602	Not Available	5444	Open in IMG/M
3300010032\|Ga0126336_10016364	All Organisms → cellular organisms → Eukaryota → Opisthokonta	5163	Open in IMG/M
3300010032\|Ga0126336_10016812	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	5098	Open in IMG/M
3300010032\|Ga0126336_10019510	Not Available	4765	Open in IMG/M
3300010032\|Ga0126336_10021172	Not Available	4586	Open in IMG/M
3300010032\|Ga0126336_10030616	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3828	Open in IMG/M
3300010032\|Ga0126336_10034773	Not Available	3584	Open in IMG/M
3300010032\|Ga0126336_10038228	All Organisms → cellular organisms → Eukaryota → Opisthokonta	3407	Open in IMG/M
3300010032\|Ga0126336_10041153	Not Available	3278	Open in IMG/M
3300010032\|Ga0126336_10042037	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	3244	Open in IMG/M
3300010032\|Ga0126336_10042094	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	3241	Open in IMG/M
3300010032\|Ga0126336_10047976	Not Available	3020	Open in IMG/M
3300010032\|Ga0126336_10048284	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	3009	Open in IMG/M
3300010032\|Ga0126336_10057188	Not Available	2743	Open in IMG/M
3300010032\|Ga0126336_10061015	Not Available	2643	Open in IMG/M
3300010032\|Ga0126336_10063404	Not Available	2588	Open in IMG/M
3300010032\|Ga0126336_10071508	Not Available	2416	Open in IMG/M
3300010032\|Ga0126336_10077307	Not Available	2310	Open in IMG/M
3300010032\|Ga0126336_10077651	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	2305	Open in IMG/M
3300010032\|Ga0126336_10085037	Not Available	2184	Open in IMG/M
3300010032\|Ga0126336_10096845	Not Available	2018	Open in IMG/M
3300010032\|Ga0126336_10106538	Not Available	1904	Open in IMG/M
3300010032\|Ga0126336_10111093	Not Available	1856	Open in IMG/M
3300010032\|Ga0126336_10113087	Not Available	1835	Open in IMG/M
3300010032\|Ga0126336_10127704	Not Available	1699	Open in IMG/M
3300010032\|Ga0126336_10131456	Not Available	1668	Open in IMG/M
3300010032\|Ga0126336_10138306	Not Available	1614	Open in IMG/M
3300010032\|Ga0126336_10143941	Not Available	1572	Open in IMG/M
3300010032\|Ga0126336_10146298	Not Available	1555	Open in IMG/M
3300010032\|Ga0126336_10147405	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	1547	Open in IMG/M
3300010032\|Ga0126336_10151686	Not Available	1518	Open in IMG/M
3300010032\|Ga0126336_10154651	Not Available	1499	Open in IMG/M
3300010032\|Ga0126336_10165264	Not Available	1433	Open in IMG/M
3300010032\|Ga0126336_10175631	Not Available	1374	Open in IMG/M
3300010032\|Ga0126336_10206486	Not Available	1227	Open in IMG/M
3300010032\|Ga0126336_10207750	Not Available	1221	Open in IMG/M
3300010032\|Ga0126336_10219467	Not Available	1175	Open in IMG/M
3300010032\|Ga0126336_10223244	Not Available	1161	Open in IMG/M
3300010032\|Ga0126336_10236040	Not Available	1114	Open in IMG/M
3300010032\|Ga0126336_10237324	Not Available	1110	Open in IMG/M
3300010032\|Ga0126336_10239456	Not Available	1102	Open in IMG/M
3300010032\|Ga0126336_10247020	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	1077	Open in IMG/M
3300010032\|Ga0126336_10250494	Not Available	1065	Open in IMG/M
3300010032\|Ga0126336_10253438	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	1056	Open in IMG/M
3300010032\|Ga0126336_10262105	Not Available	1030	Open in IMG/M
3300010032\|Ga0126336_10262211	Not Available	1029	Open in IMG/M
3300010032\|Ga0126336_10272799	Not Available	999	Open in IMG/M
3300010032\|Ga0126336_10273739	Not Available	996	Open in IMG/M
3300010032\|Ga0126336_10299374	Not Available	930	Open in IMG/M
3300010032\|Ga0126336_10301213	Not Available	926	Open in IMG/M
3300010032\|Ga0126336_10313377	Not Available	897	Open in IMG/M
3300010032\|Ga0126336_10328683	Not Available	865	Open in IMG/M
3300010032\|Ga0126336_10335202	Not Available	852	Open in IMG/M
3300010032\|Ga0126336_10337634	Not Available	847	Open in IMG/M
3300010032\|Ga0126336_10341380	Not Available	839	Open in IMG/M
3300010032\|Ga0126336_10390677	Not Available	753	Open in IMG/M
3300010032\|Ga0126336_10390866	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	753	Open in IMG/M
3300010032\|Ga0126336_10408809	Not Available	726	Open in IMG/M
3300010032\|Ga0126336_10409882	Not Available	724	Open in IMG/M
3300010032\|Ga0126336_10410271	Not Available	724	Open in IMG/M
3300010032\|Ga0126336_10417429	Not Available	713	Open in IMG/M
3300010032\|Ga0126336_10419637	Not Available	710	Open in IMG/M
3300010032\|Ga0126336_10428714	Not Available	698	Open in IMG/M
3300010032\|Ga0126336_10441335	Not Available	682	Open in IMG/M
3300010032\|Ga0126336_10457718	Not Available	662	Open in IMG/M
3300010032\|Ga0126336_10471051	Not Available	646	Open in IMG/M
3300010032\|Ga0126336_10507251	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	609	Open in IMG/M
3300010032\|Ga0126336_10518470	Not Available	598	Open in IMG/M
3300010032\|Ga0126336_10526630	Not Available	590	Open in IMG/M
3300010032\|Ga0126336_10528624	Not Available	589	Open in IMG/M
3300010032\|Ga0126336_10541925	Not Available	577	Open in IMG/M
3300010032\|Ga0126336_10552450	Not Available	568	Open in IMG/M
3300010032\|Ga0126336_10572193	Not Available	552	Open in IMG/M
3300010032\|Ga0126336_10612420	Not Available	522	Open in IMG/M
3300010032\|Ga0126336_10619704	Not Available	517	Open in IMG/M
3300010032\|Ga0126336_10641613	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Invertebrates	Host-Associated → Invertebrates	100.00%

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	100.00%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	100.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008006	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea T A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008015	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008016	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008030	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea T C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008031	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008033	Coral microbial communities from Puerto Morelos, Mexico - Siderastrea T B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010032	Coral microbial communities from El Islote,Puerto Morelos, Mexico - Siderastrea C C metagenome	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0099819_10439602	3300008006	Coral	MLTRVVAKQAKTTEVKNKFVNGKKKVQKNTQLSFWWKGKSSI*
Ga0099819_11111141	3300008006	Coral	MLTRVVAKQAKTTKVINKFVKGKKVQKNTQFSFWWKGKSSI*
Ga0099819_11300332	3300008006	Coral	MLTRVVAKQAKTTKVKNKFVNGKKGSKNTQLSFWWKAKSSI*
Ga0099819_11805571	3300008006	Coral	MFTRVVAKQAKTTKVKNKFVNEKKKVQKNTQLSFWWKGKSSI*
Ga0099816_11517843	3300008015	Coral	MLTRAVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKGKSSI*
Ga0099816_14908982	3300008015	Coral	MLTGVVIKQAKTTKVKNKFVNGKKVQKNTQLSFWWKGKSLI*
Ga0099816_15359011	3300008015	Coral	MVTRVVAKQAKTTKVKNKPANGKKKVQKNTQLSFWWKGKSS
Ga0099818_10244371	3300008016	Coral	MVTRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKAKSSI*
Ga0099818_10507372	3300008016	Coral	RVFLARNSMLTRVVATQAKTTKVKNKFVSGKKKFQKNTQLSFWWKGKSSI*
Ga0099821_10089702	3300008030	Coral	TRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKGKSSV*
Ga0099821_10686332	3300008030	Coral	MLTRVVAKEAKTTKVKNKFVNGKKVQKNTQFSFWWKAKSSI*
Ga0099817_11641541	3300008031	Coral	MFTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLSFWWKGKSSI*
Ga0099820_10143171	3300008033	Coral	ARNRMLTRIVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKGKSSI*
Ga0099820_10409751	3300008033	Coral	MLTRVAAKQAKTTKVKNKFVNGKKKVQKNTQLSFWWKAKSSI*
Ga0099820_10818081	3300008033	Coral	MLTCVVAKQAKTTTKVKNKFVNGKKVQKNTQLSFWWKAKSSI*
Ga0099820_11520572	3300008033	Coral	MLTRIVAKQAKTTKVKNKFVNGKKKVQKNTQLSFWWKGKSSI
Ga0099820_15821572	3300008033	Coral	MVTRVVAKQAKTTKVKNKFVNEKKVQKNTQLSFWWKAKSSI*
Ga0126336_100000276	3300010032	Coral	VFLARNRTLTRVVAQQAKTAKVKNKFVNEKKVQKNTQLSFWWKEKSSI*
Ga0126336_100011845	3300010032	Coral	MLTRVVAKQAKSTKVKNQFVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_100033499	3300010032	Coral	MLTRVVAKQAKTTKVKNKFGNGKIVQKNTQLSFWWKAESSI*
Ga0126336_100035541	3300010032	Coral	MLTRVVAKQAKTTKVKNKFFNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_1000384110	3300010032	Coral	MVTRVVAKQAKTTKVKNNFINGKKKVQKNTQLSFWWRVKSSI*
Ga0126336_100043674	3300010032	Coral	MLTRVVAKKAKTTKVTNKFVNEKKKVQKNTQLSFWWKAKSSI*
Ga0126336_100066782	3300010032	Coral	MFLARNRMVTRVVANVAKQAKTTKVKNKFVNGKKKNTQLSFWWKAKSSI*
Ga0126336_100087176	3300010032	Coral	MFSRVAKQAKTTKVKNKFVNGKKKVQKNTQLSFWLKGKVQFRQKN*
Ga0126336_100120093	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKVSKNTQLSFWWKREKSV*
Ga0126336_100133733	3300010032	Coral	MLTRVRAKQAKTTKVENKFVNEKKVQKNAQLSSWWKAKSSI*
Ga0126336_100144902	3300010032	Coral	MLTRVVAKQAKTTKVKTKFVNGKKVQKNTQLSFWWKEKSSI*
Ga0126336_100146022	3300010032	Coral	MLTHVVAKQARTTKVKKKFVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_100163647	3300010032	Coral	MLTRAVAKQAKTTKVKNKFVNGKKKVQNNTQLSFWWKGKVQFR*
Ga0126336_100168122	3300010032	Coral	MLTHVVAKQAKTTNFKNKFANEKKVQKNTQLAFWWKGKCSI*
Ga0126336_100195102	3300010032	Coral	MMTRVVAKQAKTKKVKNKFLNGTKSSKEYSVAFWWKAKSSI*
Ga0126336_100211721	3300010032	Coral	MLIRVVAKQAKTTKFKNKCVNEKKKTVQKNTQLSFWWKGKSSI*
Ga0126336_100306162	3300010032	Coral	MVTHIVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKAKSSI*
Ga0126336_100347731	3300010032	Coral	MLIRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFSWKGKSSI*
Ga0126336_100382284	3300010032	Coral	MLTRVVAKQAKTTKVKDKVVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_100411532	3300010032	Coral	MVTGVVAKQANTTKFKNKFVNGKKVQKNTQLSFWWEAESSI*
Ga0126336_100420373	3300010032	Coral	MVTRVVAKQAKTTKVKNNFIDRKKVQKKPRLSFWWKAKSSI*
Ga0126336_100420943	3300010032	Coral	MVTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLPFWWKAKSSI*
Ga0126336_100479762	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLSF*
Ga0126336_100482842	3300010032	Coral	MVTRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWLKAKSSI*
Ga0126336_100571883	3300010032	Coral	MLTRVVAKQAKTAKTSKVKNKFVNAKKKVQKNTQLSFCWKAKSSI*
Ga0126336_100610151	3300010032	Coral	MLTRVVAKQAKTTKFKNKFVNEKTVQKNTQLSFWWKGKSSI*
Ga0126336_100634043	3300010032	Coral	MLTGVVARQAKTTKVKNKCVNGKKVQKNTQLSFWWKAKSLI*
Ga0126336_100715081	3300010032	Coral	MFTRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_100773072	3300010032	Coral	MVTRVVAKQTKTRKVKNKFVNGKKKVQKNTQLSFWWKAKSSI*
Ga0126336_100776512	3300010032	Coral	MLTRVVAKQAKTTKFKNKFVNGKNIQKNTQSSFWWKGQSSI*
Ga0126336_100850371	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVSGKKKVQKNTQLSFWWKGKSSI*
Ga0126336_100968451	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKRKSLI*
Ga0126336_101065384	3300010032	Coral	VVAKQAKTTKVKNKFVNEKKKVQKNTQLSFWWKAKSSI*
Ga0126336_101110932	3300010032	Coral	MLTRVVAKQAKATKFKNKFVNGKKVQKNTQLSFWRKAKSSI*
Ga0126336_101130871	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWGKGKSSI*
Ga0126336_101277041	3300010032	Coral	MLTRAVAKQAKTTKVKKKFVTGKKVQKNTQLSFWWKAKSSI*
Ga0126336_101314563	3300010032	Coral	MLTRVVAKQVKTTKVKNKFVNGKKVQKNTQLSFWWKGKISI*
Ga0126336_101383062	3300010032	Coral	MLTHVVAKQAKTTKVKNKFVNGKKKVQKKTQLSFGWKGKSSI*
Ga0126336_101439411	3300010032	Coral	VFLARNRLLTRVVAKQAKTTKVKDKFVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_101462982	3300010032	Coral	MLTRFVAKQAKTTKVKDKFVNGKKVQKNTQLSFWWKRKSSI*
Ga0126336_101474051	3300010032	Coral	MVACVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKAKSSI*
Ga0126336_101516861	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNEKKKVQKNTQLSFWWK
Ga0126336_101546512	3300010032	Coral	MLTRVVAKQAKTTKVKNNLLVEKKVQKNTQLSFWWKGKGSI*
Ga0126336_101649712	3300010032	Coral	MLTRVVAKQAKTTKVKNILLMEKKVQKNTQLSFWWKG
Ga0126336_101652642	3300010032	Coral	VVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKAKSSI*
Ga0126336_101756313	3300010032	Coral	MLTRVAAKQAKTTKVKNKSVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_102064861	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGTKVQKNTQLSFWWKAKSSI*
Ga0126336_102077502	3300010032	Coral	MLTRVVAKQAKTTQVKNKFVNEKKSSKNTQLSFWWKGKSSN*
Ga0126336_102194672	3300010032	Coral	MVTRVVAKQAKTTKVKNSFIKKQKVQKNTQLSFWWKAKSLI*
Ga0126336_102232441	3300010032	Coral	MLTRVVAKQAKTTKIKNKFVNGKKKVQKNTQLSFWWKGKSSI*
Ga0126336_102360403	3300010032	Coral	LARNRMLTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLSFW*
Ga0126336_102373241	3300010032	Coral	VLAKQAKTTKVKNKFVNGKKVHKNTQLSFWWKAKSSISAKKVRR*
Ga0126336_102394562	3300010032	Coral	MLTGVVAKQAKTTKVKNNFINRKKVQKTPQLSFWWKAKSSI*
Ga0126336_102470202	3300010032	Coral	MLIRVVAKQAKTTKVKNKFVNGKKLQKNTQLSFWWKGKSSI*
Ga0126336_102504941	3300010032	Coral	MLTRVVAKEAETTKVKNKFVNGKKKVQKNTQLSFWWKGKSSI*
Ga0126336_102534381	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLSFWWKG
Ga0126336_102621052	3300010032	Coral	MVTRVVAKQAKTTKSKTILLTQKKVQKNTYLSFWWKAKSFI*
Ga0126336_102622112	3300010032	Coral	MLTGVVAKQAKTAKVKNKFVNGKKKVQKNTQLSFWWKGKSSI*
Ga0126336_102727992	3300010032	Coral	MLTRVVAKQAKTKKVKNKFVDGKKSSKKTQLPFWWKGKSSI*
Ga0126336_102737391	3300010032	Coral	MVTCILAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKAKSLT*
Ga0126336_102993741	3300010032	Coral	MLTCVVAKQAKTTKFKNKFVNEKKKVQKNTQLSVWWKGKSSI*
Ga0126336_103012131	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKSSRNTQLSFWWKGKSS
Ga0126336_103133772	3300010032	Coral	MLTRVVAKQAKTTKVKTNLLMEKVVQKNTQLSFWWKGKSSI*
Ga0126336_103286832	3300010032	Coral	MLTRIVAKQAKKTKVKNKFVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_103352023	3300010032	Coral	MVTRIVAKQAKTTKVKNKFVDRKKKVQKNTQLSFWWKVKSSI*
Ga0126336_103376341	3300010032	Coral	MLTRVVAKQAKTTKVKSKFVNGKKVQKNTQLSFWWKGKS*
Ga0126336_103413801	3300010032	Coral	MVTRVVAKQAKTAKVKNKFFNGKKVQKNTQLSFWWKAKSSTWAKKI*
Ga0126336_103906771	3300010032	Coral	MLTHIVAKQAETTKVKNKFVNAKKKVQKNTQLSSWWKGKSSI*
Ga0126336_103908661	3300010032	Coral	MLTRVVAKQAKRTKVKNKFVNGKEKVQKNTQLSFWWKGKSSI*
Ga0126336_104088091	3300010032	Coral	MLTHVVAKQAKTTKVKNKFGNGKKKVQKNTQLSFWWMGKSSI*
Ga0126336_104098822	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLSFWWKGKSSI*
Ga0126336_104102711	3300010032	Coral	ARNRMLTRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKAKSSI*
Ga0126336_104174291	3300010032	Coral	MLTRVVAKQAKTTKIKNKFVNGKKGSKNTQLSFWWKAKSSI*
Ga0126336_104196372	3300010032	Coral	MLTRVVARQTKTTKFKNKFVDEKKNVQKNTQLPFWWKGKSSI*
Ga0126336_104287141	3300010032	Coral	MLTRIVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKEKSSI*
Ga0126336_104406721	3300010032	Coral	RNRMVTRVVAKQAKTTKVKNKFVNGKKVQKNTQLSFWWNEKVQFRQKN*
Ga0126336_104413351	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKKVQKNTQLSFWWK
Ga0126336_104577181	3300010032	Coral	MLTRVVAKQAKTTQVKNKFVNGKKKAQKNTQLSFWWKGKSSI*
Ga0126336_104710511	3300010032	Coral	MLTRIVAKQAKTTKVKNKFVNGKKVQKNTQLSFW*
Ga0126336_105072512	3300010032	Coral	MLTRVVAKQAKTTKVKNKLVNGKKKVQKNTQLSFWWKG
Ga0126336_105184702	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVSGKEKVQKNTQLSFWWKGKSSI*
Ga0126336_105266301	3300010032	Coral	MLTRVVAKQAKTTKVKKKFVSGKKKVQKNTQLSFWWKGKSSI*
Ga0126336_105286242	3300010032	Coral	MLTRVVANQAKTTKVKNKFVNGKKVQKITQLSFWWKGKSSI*
Ga0126336_105419251	3300010032	Coral	MLTRFVAKQAKTTKVKSKLVNGKKKVQKNTQLSFWWKGKSSI*
Ga0126336_105524501	3300010032	Coral	MLTRFVAKQAKTTKVKNKFVNGRKVQKNTQLSFWWKGKSSI*
Ga0126336_105721931	3300010032	Coral	MVTRVVAKQAKTTKATNKFVNRKKKVQKNTQLSFWWKAKSLI*
Ga0126336_106124201	3300010032	Coral	MLTPVEAKQAKTTKVKNKFVNGKKVQKNTQLSFWWKGKSSI*
Ga0126336_106197041	3300010032	Coral	MLTRVVAKQAKTTKVKNKFVNGKKKVQKSTQLSFWWKVKSSI*
Ga0126336_106416132	3300010032	Coral	MLTRVVAKQAKTAKVKNKFVSGKKVQKNTQLSFWWKGKSSI*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences