Metagenome / Metatranscriptome Family F093318

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093318
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	68 residues
Representative Sequence	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDRVFIYCLSCEYKKVLGSKDYEDIVKAVENAG
Number of Associated Samples	76
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	85.85 %
% of genes near scaffold ends (potentially truncated)	14.15 %
% of genes from short scaffolds (< 2000 bps)	63.21 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (64.151 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (32.075 % of family members)
Environment Ontology (ENVO)	Unclassified (66.038 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (76.415 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.77% β-sheet: 17.53% Coil/Unstructured: 56.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01464	SLT	38.68
PF02867	Ribonuc_red_lgC	3.77
PF00534	Glycos_transf_1	2.83
PF13385	Laminin_G_3	1.89
PF02839	CBM_5_12	1.89
PF01844	HNH	1.89
PF13692	Glyco_trans_1_4	0.94
PF07603	DUF1566	0.94
PF13640	2OG-FeII_Oxy_3	0.94
PF06067	DUF932	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	3.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.09 %
Unclassified	root	N/A	34.91 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	64.15 %
Unclassified	root	N/A	34.91 %
cellular organisms	root	All Organisms → cellular organisms	0.94 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	64.15 %
Unclassified	root	N/A	34.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	64.15 %
Unclassified	root	N/A	34.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	64.15 %
Unclassified	root	N/A	34.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	64.15 %
Unclassified	root	N/A	34.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	47.17 %
Unclassified	root	N/A	34.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	47.17 %
Unclassified	root	N/A	34.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1006147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3238	Open in IMG/M
3300000756\|JGI12421J11937_10002483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7424	Open in IMG/M
3300000756\|JGI12421J11937_10035952	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1731	Open in IMG/M
3300002408\|B570J29032_109903448	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2253	Open in IMG/M
3300002835\|B570J40625_100013477	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	14526	Open in IMG/M
3300004124\|Ga0066178_10123137	Not Available	718	Open in IMG/M
3300004240\|Ga0007787_10704378	Not Available	505	Open in IMG/M
3300004461\|Ga0066223_1285055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	771	Open in IMG/M
3300005528\|Ga0068872_10502955	Not Available	650	Open in IMG/M
3300005580\|Ga0049083_10165182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	757	Open in IMG/M
3300005662\|Ga0078894_10128482	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2261	Open in IMG/M
3300005662\|Ga0078894_10895069	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	770	Open in IMG/M
3300005662\|Ga0078894_11012341	Not Available	714	Open in IMG/M
3300007363\|Ga0075458_10011889	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2778	Open in IMG/M
3300007544\|Ga0102861_1219989	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	524	Open in IMG/M
3300007559\|Ga0102828_1044545	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1022	Open in IMG/M
3300007562\|Ga0102915_1130183	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	822	Open in IMG/M
3300007639\|Ga0102865_1246813	Not Available	532	Open in IMG/M
3300007708\|Ga0102859_1279250	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	504	Open in IMG/M
3300007973\|Ga0105746_1290696	Not Available	566	Open in IMG/M
3300007992\|Ga0105748_10108364	Not Available	1115	Open in IMG/M
3300007992\|Ga0105748_10504594	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	529	Open in IMG/M
3300008107\|Ga0114340_1051558	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3113	Open in IMG/M
3300008107\|Ga0114340_1089156	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1256	Open in IMG/M
3300008107\|Ga0114340_1096393	Not Available	1876	Open in IMG/M
3300008110\|Ga0114343_1059035	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1449	Open in IMG/M
3300008111\|Ga0114344_1003840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6671	Open in IMG/M
3300008119\|Ga0114354_1091063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1939	Open in IMG/M
3300008962\|Ga0104242_1010230	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1653	Open in IMG/M
3300008999\|Ga0102816_1077399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1005	Open in IMG/M
3300008999\|Ga0102816_1225223	Not Available	589	Open in IMG/M
3300009026\|Ga0102829_1064242	Not Available	1114	Open in IMG/M
3300009068\|Ga0114973_10010809	All Organisms → cellular organisms → Bacteria	5919	Open in IMG/M
3300009068\|Ga0114973_10171614	Not Available	1197	Open in IMG/M
3300009068\|Ga0114973_10717492	Not Available	508	Open in IMG/M
3300009151\|Ga0114962_10282575	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	933	Open in IMG/M
3300009154\|Ga0114963_10391505	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	755	Open in IMG/M
3300009155\|Ga0114968_10073456	Not Available	2139	Open in IMG/M
3300009158\|Ga0114977_10107434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1689	Open in IMG/M
3300009158\|Ga0114977_10558933	Not Available	621	Open in IMG/M
3300009159\|Ga0114978_10455232	Not Available	758	Open in IMG/M
3300009159\|Ga0114978_10455233	Not Available	758	Open in IMG/M
3300009159\|Ga0114978_10546481	Not Available	675	Open in IMG/M
3300009164\|Ga0114975_10604958	Not Available	584	Open in IMG/M
3300009181\|Ga0114969_10788007	Not Available	505	Open in IMG/M
3300009183\|Ga0114974_10272232	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1005	Open in IMG/M
3300009184\|Ga0114976_10637051	Not Available	538	Open in IMG/M
3300009684\|Ga0114958_10375690	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	690	Open in IMG/M
3300010160\|Ga0114967_10547721	Not Available	561	Open in IMG/M
3300010374\|Ga0114986_1029924	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1008	Open in IMG/M
3300012000\|Ga0119951_1007628	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4785	Open in IMG/M
3300012000\|Ga0119951_1015961	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2837	Open in IMG/M
3300013006\|Ga0164294_10860767	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	610	Open in IMG/M
3300014050\|Ga0119952_1018489	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2400	Open in IMG/M
3300020048\|Ga0207193_1035106	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5650	Open in IMG/M
3300020141\|Ga0211732_1447601	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2305	Open in IMG/M
3300020151\|Ga0211736_10705335	Not Available	734	Open in IMG/M
3300020172\|Ga0211729_11294443	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2932	Open in IMG/M
3300020483\|Ga0207418_100326	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8933	Open in IMG/M
3300020563\|Ga0208082_1018160	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1485	Open in IMG/M
3300021519\|Ga0194048_10089908	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1190	Open in IMG/M
3300021963\|Ga0222712_10385359	Not Available	856	Open in IMG/M
3300023174\|Ga0214921_10000356	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	86843	Open in IMG/M
3300023174\|Ga0214921_10000990	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	49719	Open in IMG/M
3300023174\|Ga0214921_10013117	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9780	Open in IMG/M
3300023174\|Ga0214921_10018591	Not Available	7604	Open in IMG/M
3300023174\|Ga0214921_10062853	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3116	Open in IMG/M
3300023174\|Ga0214921_10232476	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1105	Open in IMG/M
3300023174\|Ga0214921_10333535	Not Available	819	Open in IMG/M
3300023184\|Ga0214919_10032121	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5444	Open in IMG/M
3300023184\|Ga0214919_10059696	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3547	Open in IMG/M
3300023184\|Ga0214919_10210280	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1446	Open in IMG/M
3300024346\|Ga0244775_10494701	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	999	Open in IMG/M
3300024346\|Ga0244775_10755247	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	780	Open in IMG/M
3300024348\|Ga0244776_10956904	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502	Open in IMG/M
3300025635\|Ga0208147_1101101	Not Available	699	Open in IMG/M
3300027129\|Ga0255067_1014707	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1176	Open in IMG/M
3300027563\|Ga0209552_1157541	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	581	Open in IMG/M
3300027597\|Ga0255088_1092320	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300027644\|Ga0209356_1043927	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1416	Open in IMG/M
3300027697\|Ga0209033_1215903	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	567	Open in IMG/M
3300027708\|Ga0209188_1031299	Not Available	2540	Open in IMG/M
3300027710\|Ga0209599_10065445	Not Available	955	Open in IMG/M
3300027733\|Ga0209297_1074373	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1493	Open in IMG/M
3300027747\|Ga0209189_1018178	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3832	Open in IMG/M
3300027754\|Ga0209596_1001217	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	22549	Open in IMG/M
3300027754\|Ga0209596_1004545	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10553	Open in IMG/M
3300027759\|Ga0209296_1006118	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7617	Open in IMG/M
3300027759\|Ga0209296_1009199	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6008	Open in IMG/M
3300027759\|Ga0209296_1071647	Not Available	1734	Open in IMG/M
3300027759\|Ga0209296_1085015	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1548	Open in IMG/M
3300027759\|Ga0209296_1290229	Not Available	654	Open in IMG/M
3300027760\|Ga0209598_10018290	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4201	Open in IMG/M
3300027770\|Ga0209086_10078617	Not Available	1746	Open in IMG/M
3300027782\|Ga0209500_10014322	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4777	Open in IMG/M
3300027782\|Ga0209500_10041000	Not Available	2538	Open in IMG/M
3300027782\|Ga0209500_10155552	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1072	Open in IMG/M
3300027782\|Ga0209500_10255842	Not Available	761	Open in IMG/M
3300027797\|Ga0209107_10028409	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3210	Open in IMG/M
3300027804\|Ga0209358_10248820	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	895	Open in IMG/M
3300027892\|Ga0209550_10075555	Not Available	2604	Open in IMG/M
3300027963\|Ga0209400_1044636	Not Available	2344	Open in IMG/M
3300028025\|Ga0247723_1015321	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2755	Open in IMG/M
3300028027\|Ga0247722_10029242	Not Available	2219	Open in IMG/M
3300034082\|Ga0335020_0003198	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10953	Open in IMG/M
3300034168\|Ga0335061_0515559	Not Available	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.23%
Terrestrial	Environmental → Terrestrial	3.77%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.25%
Marine	Environmental → Aquatic → Marine	16.98%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.77%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	58.49%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.49%
Coastal	Environmental → Aquatic → Marine → Coastal	5.66%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.83%
River	Environmental → Aquatic → Freshwater → River	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	57.55%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.26%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.49%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.66%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.77%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.77%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.94%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	32.08%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.26%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	10.38%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.49%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.60%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.66%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.83%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.83%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.83%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.89%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.89%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.89%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.89%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.94%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.94%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.94%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008111	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010374	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S-1-Day17	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020483	Freshwater microbial communities from Lake Mendota, WI - 05AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020563	Freshwater microbial communities from Lake Mendota, WI - 09JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027129	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8h	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027597	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8d	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10061479	3300000736	Freshwater And Sediment	MKIQYVSKYLSLSKEGLVPELLCPMDQGSLLPNQDGEDRVFIYCLSCEYKKILGSKDYDDIVRAVENVG*
JGI12421J11937_100024834	3300000756	Freshwater And Sediment	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFTYCLSCEYKKFLGTKDYEDIVRAVENAR*
JGI12421J11937_100359523	3300000756	Freshwater And Sediment	MQIQYVSKYIALSREGLFPELNCPMDQGPLLPNQDHEDQVFLYCLSCEYKKVLGTKDYDDIMKAVENAG*
B570J29032_1099034483	3300002408	Freshwater	MQKIQYVSKYIALSEEGLVPRLECPMDQGSLLPNQDLEDNIFLYCLSCDFNKTLGFKYYDELVKHVKEVGNG*
B570J40625_10001347733	3300002835	Freshwater	MKVQYVSKYLSLSQEGLVPELLCPMDQGSLYPNQDGEDRVFVYCLSCNYKKVLGSKDYDNIVKAVENVG*
Ga0066178_101231374	3300004124	Freshwater Lake	YIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFTYCLSCDYKKFLGTKDYEDIVRAVENAR*
Ga0007787_107043782	3300004240	Freshwater Lake	MQIQYVSKYIALSREGLFPELKCPMDQGPLFPNQDGEDRVFVYCLSCQYKKILGTKDYEDIVRAVEDAG*
Ga0066223_12850552	3300004461	Marine	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGLKDYEDIVKAVNNVR*
Ga0068872_105029551	3300005528	Freshwater Lake	YVSKYLSLSQEGLVPELLCPMDQGSLYPNQDGEDRVFVYCLSCNYKKVLGSKDYDNIVKAVENVG*
Ga0049083_101651822	3300005580	Freshwater Lentic	MQIQYVSKYIALSEEGLVPRLECPMDQGSLLPNQDSKDQVFIYCLSCEYKKVLGSKDYENIV
Ga0078894_101284823	3300005662	Freshwater Lake	MQIQYVSKYIALSREGLFPELNCPMDQGPLFPNQDNEDRVFVYCLSCQYKKILGTKDYEDIVRAVENAG*
Ga0078894_108950692	3300005662	Freshwater Lake	MQIQYVSKYIALSKEGLFPELNCPMDQGPLLPNQNHEDQVFVYCLSCEYKKVLGTKDYEDIVRAVENAG*
Ga0078894_110123413	3300005662	Freshwater Lake	IALSREGLFPELNCPMDQGPLLPNQDYEEQVFVYCLSCEYKKVLGSKEYNDIVKAVENAG
Ga0075458_100118894	3300007363	Aqueous	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDNEDRVFIYCLSCQYKKILGLKEYNDIVRAVENAG*
Ga0102861_12199891	3300007544	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGLLLPNQDGEDRVFIYCLYCDYKKVLGTKDYDD
Ga0102828_10445452	3300007559	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGLLLPNQDGEDKVFLYCLSCDYKKVLGTKDYDDIVKAVENAG*
Ga0102915_11301832	3300007562	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDKVFTYCLSCEYKKFLGTKDYEDIVRAVENAG*
Ga0102865_12468133	3300007639	Estuarine	MQIQYVSKYIALSREGLFPELNCPMDQGPLFPNQDSKDQVFIYCLSCKYKKVLGSKDYEDIVKAVENAG*
Ga0102859_12792501	3300007708	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGLLLPNQDGEDRVFIYCLSCDYKKVLGTKDYDDIMKAVDNVR*
Ga0105746_12906962	3300007973	Estuary Water	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDHEEQVFVYCLSCEYKKVLGSKEYNDIVKAVENAG*
Ga0105748_101083643	3300007992	Estuary Water	KYIALSEEGLVPRLECPMDQGPLFPNQDGEDRVFTYCLSCDYKKFLGTKDYEDIVRAVENAG*
Ga0105748_105045942	3300007992	Estuary Water	MQIQYVSKYIALSKEGLFPDLECPMDQGPLLPNQDHEEQVFVYCLSCEYKKVLGSKEYNDIVKAVENAE*
Ga0114340_10515584	3300008107	Freshwater, Plankton	MQIQYVSKYIALSEEGLVPGLSCPMDQGPLLPNMDLEDNIYLYCLSCSYKKTLGSSEYEALSSLVKANTNE*
Ga0114340_10891562	3300008107	Freshwater, Plankton	MKIQYVSKYLALSEEGLVPRLNCPMDQGPLFTNQDLEDNIFLYCISCSYKKTIGYKFYDDIIKKMKGL*
Ga0114340_10963935	3300008107	Freshwater, Plankton	MRQIQTVSKYIALSQEGLVPRLNCPMDQGPLLVNQNLEDQVYLYCLSCKYKKFIGYEFYDDIISKMKGL*
Ga0114343_10590352	3300008110	Freshwater, Plankton	MQIQYVSKYIALSEEGLVPGLSCPMDQGPLLPNMDLEDNIYLYCLSCSYKKTLGSSEYEALSSLVKANTKE*
Ga0114344_10038407	3300008111	Freshwater, Plankton	MQVQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDMQDRVFVYCLSCDYKKILGTKDYEEILGLIKNAE*
Ga0114354_10910636	3300008119	Freshwater, Plankton	MQVQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDMHFVYCLSCDYKKILGTKDYEEILGLIKNAE*
Ga0104242_10102303	3300008962	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNLDQDDNIFLYCLSCSFKKMMGSVDYQNLVSLVKTVSNAG*
Ga0102816_10773992	3300008999	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGLLLPNQDGEDRVFIYCLSCDYKKVLGTKDYDDIMKAVENVG*
Ga0102816_12252231	3300008999	Estuarine	SREGLFPELNCPMDQGPLFPNQDSEDRVFVYCLSCQYKKILGTKDYEDIVRAVENVG*
Ga0102829_10642422	3300009026	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGLLLPNQDGGDRVFIYCLSCDYKKVLGTKDYDNIVKAVENAG*
Ga0114973_100108098	3300009068	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDRVFVYCLSCHYKKVLGTKDYDDIMKAVDNVR*
Ga0114973_101716141	3300009068	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDQVFIYCLSCEYKKVLGSKDYEDIVKAVENAG*
Ga0114973_107174923	3300009068	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSKDQVFIYCLSCEYKKMLGSKDYEDIVKAVENAG*
Ga0114962_102825752	3300009151	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLNCPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGLKDYEDIVKAVNNVG*
Ga0114963_103915052	3300009154	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGLKDYEDIVKAVNNVG*
Ga0114968_100734562	3300009155	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDKVFIYCLSCEYKKFLGTKDYDDIVRAVENAR*
Ga0114977_101074344	3300009158	Freshwater Lake	MQIQYVSKYIALSKEGLFPELKCPMDQGPLFPNQDNEDQVFLYCLSCDYKKVLGTKDYNDIVKAVENAG*
Ga0114977_105589331	3300009158	Freshwater Lake	VMQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDRVFIYCLSCEYKKVLGSKDYEDIVKAVENAG*
Ga0114978_104552321	3300009159	Freshwater Lake	MQIQYVSKYIALSKEGLFPELECPMDQGPLFPNQDNEDQVFLYCLSCDYKKVLGTKDYNDIVKAVENAG*
Ga0114978_104552331	3300009159	Freshwater Lake	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDHEEQVFVYCLSCEYKKVLGSKEYNDIVKAVKNAG*
Ga0114978_105464812	3300009159	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDRGPLFPNQDGEDRVFVYCLSCHYKKVLGTKDYNDIMKAVENAG*
Ga0114975_106049583	3300009164	Freshwater Lake	MQIQYVSKYIALSKEGLFPELECPMDQGPLFPNQDNEDQVFLYCLSCDYKKVLGIKDYNYIVKAVENAG*
Ga0114969_107880071	3300009181	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGLEDYEDIVKAVNNVG*
Ga0114974_102722323	3300009183	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDRVFVYCLSCHYKKVLGIKDYDDIVKAVDNVK*
Ga0114976_106370512	3300009184	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSKDQVFIYCLSCEYKKVLGSKDYEDIVKAVENAG*
Ga0114958_103756902	3300009684	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLNCPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGSKDYEDIVKAVNNVR*
Ga0114967_105477212	3300010160	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDRVFIYCLSCEYKKVLGSKDYEDIVKAVENAG*
Ga0114986_10299242	3300010374	Deep Subsurface	MQIQYVSKYIALSKEGLFPELNCPMDQGPLLPNQDHEDQVFVYCLSCEYKKVLGSKEYNDIVKAVKNAG*
Ga0119951_10076283	3300012000	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDNEDKVFIYCLSCQYKKVIGSKDYNDIVRAVENAG*
Ga0119951_10159613	3300012000	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGSKDYEDIVKAVNNVG*
Ga0164294_108607672	3300013006	Freshwater	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDHEEQVFIYCLSCNYKKVLGTKDYEDIKRMVENAG*
Ga0119952_10184898	3300014050	Freshwater	ALSEEGLVPRLECPMDQGPLLPNQDLEDQVFLYCLSCQYKKVLGTKDYDDIMKAVENVK*
Ga0207193_10351069	3300020048	Freshwater Lake Sediment	MQIQYVSKYIALSREGLFPELNCPMDQGPLFPNQDSEDKVFVYCLSCQYKKILGTKDYEDIVRAVENAG
Ga0211732_14476017	3300020141	Freshwater	MQIQYVSKYVALSEEGLVPKLECPIDQGSLLPNQDLEDNIFMYCLSCKYKKFIGSKYYENIFKSVNGVLNGEKL
Ga0211736_107053352	3300020151	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDRVFVYCLSCEYKKVLGTKDYEDIVKAVENAG
Ga0211729_112944434	3300020172	Freshwater	MQIQYVSKYIALSREGLFPELNCPMDQGPLLPNQDYEERVFLYCLSCEYKKVLGSKEYNDIVKAVENAG
Ga0207418_10032629	3300020483	Freshwater	MKVQYVSKYLSLSQEGLVPELLCPMDQGSLYPNQDGEDRVFVYCLSCNYKKVLGSKDYDNIVKAVENVG
Ga0208082_10181602	3300020563	Freshwater	MQKIQYVSKYIALSEEGLVPRLECPMDQGSLLPNQDLEDNIFLYCLSCDFNKTLGFKYYDELVKHVKEVGNG
Ga0194048_100899083	3300021519	Anoxic Zone Freshwater	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDNEEQVFVYCLSCEYKKVLGSKEYNDIVKAVKNAG
Ga0222712_103853593	3300021963	Estuarine Water	MQIQYVSKYIALSKEGLFPELECPMDQGPLFPNQDQEDQVFLYCLSCDYKKVLGIKDYNDIVKAVDNAG
Ga0214921_10000356100	3300023174	Freshwater	MQIQYVSKYIALSQEGLVPRLECPMDQGPLFPNQNGEDRVFVYCLSCQYKKILGTKDYDDIVKAVDNVK
Ga0214921_1000099018	3300023174	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDLEDQVFLYCLSCQYKKVLGTKDYDDIMKAVENVK
Ga0214921_1001311710	3300023174	Freshwater	MQIQYVSKYIALSEEGLVPRLKCPMDQGPLFPNQDNKDQVFLYCLSCDYKKVLGTKDYNDIVKAVENAG
Ga0214921_1001859126	3300023174	Freshwater	MQIQYVSKYIALSEEGLVPRLKCPMDQGPLLPNLDLEDKIFLYCLSCEYKKFIGAKDYDDIVKAVDNVR
Ga0214921_1006285311	3300023174	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDNEDKVFIYCLSCQYKKILGLKEYNDIVRAVENAG
Ga0214921_102324763	3300023174	Freshwater	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDLEDEVFLYCLSCQYKKVLGSKDYNEIVRAVENVG
Ga0214921_103335353	3300023174	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGSKDYEDIVKAVNNVG
Ga0214919_100321214	3300023184	Freshwater	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDHEEQVFVYCLSCEYKKVLGSKEYNDIVKAVENAG
Ga0214919_1005969610	3300023184	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDNEDRVFVYCLSCQYKKVLGSKDYEDIVKAVNNVG
Ga0214919_102102803	3300023184	Freshwater	MQIQYVSKYIALSKEGLVPELECPMDQGPLFPNLDQDDNVFLYCLSCSFKKMMGSVDYQNLVSLVKTVSNAG
Ga0244775_104947012	3300024346	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGLLLPNQDGEDKVFLYCLSCDYKKVLGTKDYDDIVKAVENAG
Ga0244775_107552471	3300024346	Estuarine	MQIQYVSKYIALSREGLFPELNCPMDQGPLFPNQDSEDRVFVYCLSCQYKKILGTKDYEDIVRAVENAG
Ga0244776_109569041	3300024348	Estuarine	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDKVFTYCLSCEYKKFLGTKDYED
Ga0208147_11011013	3300025635	Aqueous	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDNEDRVFIYCLSCQYKKILGLKEYNDIVRAVENAG
Ga0255067_10147071	3300027129	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDRVFTYCLSCDYKKFLGTKDYEDIVRAVENAR
Ga0209552_11575412	3300027563	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFTYCLSCDYKKFLGTKDYEDIVRAVENA
Ga0255088_10923202	3300027597	Freshwater	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDRVFTYCLSCDYKKFLGTKDYEDIVRAVENVR
Ga0209356_10439272	3300027644	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDGEDRVFTYCLSCDYKKFLGTKDYEDIVRAVENAR
Ga0209033_12159032	3300027697	Freshwater Lake	MQIQYVSKYIALSREGLFPELKCPMDQGPLFPNQDGEDRVFVYCLSCQYKKILGTKDYEDIVRAVE
Ga0209188_10312995	3300027708	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLNCPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGSKDYEDIVKAVNNVG
Ga0209599_100654452	3300027710	Deep Subsurface	MQIQYVSKYIALSKEGLFPELNCPMDQGPLLPNQDHEDQVFVYCLSCEYKKVLGSKEYNDIVKAVKNAG
Ga0209297_10743733	3300027733	Freshwater Lake	MQIQYVSKYIALSKEGLFPELKCPMDQGPLFPNQDNEDQVFLYCLSCDYKKVLGTKDYNDIVKAVENAG
Ga0209189_10181784	3300027747	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLNCPMDQGPLLPNQDGEDRVFIYCLSCQYKKVLGLKDYEDIVKAVNNVG
Ga0209596_100121720	3300027754	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDKVFIYCLSCEYKKFLGTKDYDDIVRAVENAR
Ga0209596_100454518	3300027754	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDRVFIYCLSCEYKKVLGSKDYEDIVKAVENAG
Ga0209296_10061182	3300027759	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLNCPMDQGPLLPNQDGEDRVFIYCLSCDYKKVIGSKDYDDIVKAVDNVG
Ga0209296_10091993	3300027759	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSKDQVFIYCLSCEYKKVLGSKDYEDIVKAVENAG
Ga0209296_10716475	3300027759	Freshwater Lake	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDREEQVFVYCLSCEYKKVLGSKDYNEIVKAVENAR
Ga0209296_10850153	3300027759	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDRVFVYCLSCHYKKVLGIKDYDDIVKAVDNVK
Ga0209296_12902293	3300027759	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDRVFIYCLSCEYKKVLGSKDYENIVKAVENAG
Ga0209598_100182907	3300027760	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLFPNQDGEDRVFVYCLSCHYKKVLGTKDYDDIMKAVDNVR
Ga0209086_100786175	3300027770	Freshwater Lake	QIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSEDQVFIYCLSCEYKKMLGSKDYEDIVKAVENAG
Ga0209500_100143223	3300027782	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDRGPLFPNQDGEDRVFVYCLSCHYKKVLGTKDYNDIMKAVENAG
Ga0209500_100410008	3300027782	Freshwater Lake	SKYIALSKEGLFPELKCPMDQGPLFPNQDNEDQVFLYCLSCDYKKVLGTKDYNDIVKAVENAG
Ga0209500_101555523	3300027782	Freshwater Lake	MQIQYVSKYIALSKEGLFPELECPMDQGPLFPNQDNEDQVFLYCLSCDYKKVLGTKDYNDIVKAVENAG
Ga0209500_102558423	3300027782	Freshwater Lake	MQIQYVSKYIALSKEGLFPELECPMDQGPLLPNQDHEEQVFVYCLSCEYKKVLGSKEYNDIVKAVKNAR
Ga0209107_100284093	3300027797	Freshwater And Sediment	MQIQYVSKYIALSREGLFPELNCPMDQGPLLPNQDHEDQVFLYCLSCEYKKVLGTKDYDDIMKAVENAG
Ga0209358_102488203	3300027804	Freshwater Lake	MQIQYVSKYIALSREGLFPELNCPMDQGPLFPNQDGEDRVFVYCLSCQYKKILGTKDYEDIVRAVEDAG
Ga0209550_100755557	3300027892	Freshwater Lake	IQYVSKYLSLSKEGLVPELLCPMDQGSLLPNQDGEDRVFIYCLSCEYKKILGSKDYDDIVRAVENVG
Ga0209400_10446362	3300027963	Freshwater Lake	MQIQYVSKYIALSEEGLVPRLECPMDQGPLLPNQDSKDQVFIYCLSCEYKKMLGSKDYEDIVKAVENAG
Ga0247723_10153212	3300028025	Deep Subsurface Sediment	MQIQYVSKYIALSKEGLFPELNCPMDQGPLLPNQDYEERVFLYCLSCEYKKVLGSKEYNDIVKAVENAG
Ga0247722_100292421	3300028027	Deep Subsurface Sediment	MQIQYVSKYITLSREGLFPELNCPMDQGPLLPNQDYEEQVFVYCLSCEYKKVLGSKEYNDIVKAVENAG
Ga0335020_0003198_3120_3329	3300034082	Freshwater	MQIQYVSKYIALSKEGLFPELNCPMDQGPLFPNLDNEDIAFLYCLSCDYKKVLGVKDYENIVRAVENAG
Ga0335061_0515559_371_580	3300034168	Freshwater	MQIQYVSKYIALSREGLFPRLNCPMDEGPLFPNLDNEDRAFLYCLSCEYKKVLGTKDYEDIVKAVNNAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093318

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences