Metagenome / Metatranscriptome Family F093350

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093350
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	86 residues
Representative Sequence	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEAAAVAQHE
Number of Associated Samples	84
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	17.92 %
% of genes from short scaffolds (< 2000 bps)	69.81 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (36.792 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (13.207 % of family members)
Environment Ontology (ENVO)	Unclassified (50.943 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (57.547 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.14% β-sheet: 0.00% Coil/Unstructured: 31.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13384	HTH_23	7.55
PF00091	Tubulin	6.60
PF13578	Methyltransf_24	6.60
PF13589	HATPase_c_3	2.83
PF00383	dCMP_cyt_deam_1	2.83
PF00149	Metallophos	1.89
PF05491	RuvB_C	1.89
PF05496	RuvB_N	1.89
PF08241	Methyltransf_11	0.94
PF04545	Sigma70_r4	0.94
PF13328	HD_4	0.94
PF13809	Tubulin_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	3.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.04 %
Unclassified	root	N/A	33.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	41.51 %
Unclassified	root	N/A	33.96 %
Viruses	superkingdom	All Organisms → Viruses	24.53 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	36.79 %
Unclassified	root	N/A	33.96 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	24.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.72 %

Name	Rank	Taxonomy	Distribution
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	36.79 %
Unclassified	root	N/A	33.96 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	24.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	36.79 %
Unclassified	root	N/A	33.96 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	24.53 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	36.79 %
Unclassified	root	N/A	33.96 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	24.53 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	36.79 %
Unclassified	root	N/A	33.96 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	24.53 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	36.79 %
Unclassified	root	N/A	33.96 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	24.53 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.94 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10034971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1765	Open in IMG/M
3300002408\|B570J29032_109457047	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	778	Open in IMG/M
3300002835\|B570J40625_100141275	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
3300005420\|Ga0068879_1530494	Not Available	564	Open in IMG/M
3300005581\|Ga0049081_10038105	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1827	Open in IMG/M
3300005581\|Ga0049081_10088469	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1159	Open in IMG/M
3300005581\|Ga0049081_10180799	Not Available	762	Open in IMG/M
3300005582\|Ga0049080_10239480	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	594	Open in IMG/M
3300005662\|Ga0078894_11412128	Not Available	581	Open in IMG/M
3300007171\|Ga0102977_1102602	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1898	Open in IMG/M
3300007177\|Ga0102978_1292497	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300007618\|Ga0102896_1056908	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1299	Open in IMG/M
3300007972\|Ga0105745_1246485	Not Available	573	Open in IMG/M
3300007974\|Ga0105747_1154988	All Organisms → cellular organisms → Bacteria → Proteobacteria	741	Open in IMG/M
3300007992\|Ga0105748_10064737	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1428	Open in IMG/M
3300007992\|Ga0105748_10154926	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	940	Open in IMG/M
3300008055\|Ga0108970_10540119	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1965	Open in IMG/M
3300008107\|Ga0114340_1022971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4218	Open in IMG/M
3300008110\|Ga0114343_1001167	Not Available	25357	Open in IMG/M
3300008110\|Ga0114343_1058421	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1459	Open in IMG/M
3300008110\|Ga0114343_1215066	Not Available	542	Open in IMG/M
3300008113\|Ga0114346_1006020	Not Available	12032	Open in IMG/M
3300008113\|Ga0114346_1057410	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1913	Open in IMG/M
3300008113\|Ga0114346_1192864	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	822	Open in IMG/M
3300008113\|Ga0114346_1235773	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	695	Open in IMG/M
3300008113\|Ga0114346_1290406	Not Available	572	Open in IMG/M
3300008266\|Ga0114363_1004752	Not Available	18017	Open in IMG/M
3300008339\|Ga0114878_1005233	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	7059	Open in IMG/M
3300008450\|Ga0114880_1273966	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	510	Open in IMG/M
3300008510\|Ga0110928_1081883	Not Available	547	Open in IMG/M
3300008962\|Ga0104242_1011849	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1532	Open in IMG/M
3300009051\|Ga0102864_1194272	Not Available	554	Open in IMG/M
3300009059\|Ga0102830_1044150	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1360	Open in IMG/M
3300009068\|Ga0114973_10002615	Not Available	12959	Open in IMG/M
3300009079\|Ga0102814_10158008	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1239	Open in IMG/M
3300009152\|Ga0114980_10004696	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	9178	Open in IMG/M
3300009155\|Ga0114968_10073350	Not Available	2141	Open in IMG/M
3300009158\|Ga0114977_10281752	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	951	Open in IMG/M
3300010354\|Ga0129333_10188049	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1882	Open in IMG/M
3300010354\|Ga0129333_10488001	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1081	Open in IMG/M
3300010354\|Ga0129333_10857622	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	771	Open in IMG/M
3300010370\|Ga0129336_10338721	Not Available	829	Open in IMG/M
3300011995\|Ga0153800_1023999	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300012017\|Ga0153801_1026112	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1035	Open in IMG/M
3300012666\|Ga0157498_1002113	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3439	Open in IMG/M
3300013004\|Ga0164293_10103116	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2186	Open in IMG/M
3300013006\|Ga0164294_11233924	Not Available	501	Open in IMG/M
3300013014\|Ga0164295_10061313	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2813	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10456457	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	742	Open in IMG/M
3300013372\|Ga0177922_11243934	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	928	Open in IMG/M
3300017766\|Ga0181343_1002534	Not Available	6806	Open in IMG/M
3300017766\|Ga0181343_1096980	Not Available	838	Open in IMG/M
3300017774\|Ga0181358_1112717	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	963	Open in IMG/M
3300017780\|Ga0181346_1176246	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	785	Open in IMG/M
3300017785\|Ga0181355_1094168	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1243	Open in IMG/M
3300020074\|Ga0194113_10030957	Not Available	5576	Open in IMG/M
3300020141\|Ga0211732_1392032	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	824	Open in IMG/M
3300020141\|Ga0211732_1558324	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2352	Open in IMG/M
3300020151\|Ga0211736_10745994	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	5822	Open in IMG/M
3300020159\|Ga0211734_11164609	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3712	Open in IMG/M
3300020161\|Ga0211726_10903492	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3631	Open in IMG/M
3300020161\|Ga0211726_10903660	Not Available	531	Open in IMG/M
3300020172\|Ga0211729_10163720	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1156	Open in IMG/M
3300021961\|Ga0222714_10010543	Not Available	7959	Open in IMG/M
3300021963\|Ga0222712_10132410	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1704	Open in IMG/M
3300021963\|Ga0222712_10338151	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	932	Open in IMG/M
3300022179\|Ga0181353_1137381	Not Available	572	Open in IMG/M
3300022407\|Ga0181351_1140435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	882	Open in IMG/M
3300024346\|Ga0244775_10276351	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1396	Open in IMG/M
3300024346\|Ga0244775_11183355	Not Available	596	Open in IMG/M
3300024348\|Ga0244776_10487814	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	799	Open in IMG/M
3300027211\|Ga0208307_1067990	Not Available	519	Open in IMG/M
3300027578\|Ga0255075_1041853	Not Available	844	Open in IMG/M
3300027578\|Ga0255075_1093217	Not Available	520	Open in IMG/M
3300027659\|Ga0208975_1031963	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1677	Open in IMG/M
3300027733\|Ga0209297_1009114	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4902	Open in IMG/M
3300027733\|Ga0209297_1308731	Not Available	587	Open in IMG/M
3300027734\|Ga0209087_1031728	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2521	Open in IMG/M
3300027746\|Ga0209597_1001289	Not Available	16480	Open in IMG/M
3300027754\|Ga0209596_1010412	Not Available	6196	Open in IMG/M
3300027793\|Ga0209972_10000593	Not Available	35938	Open in IMG/M
3300027797\|Ga0209107_10185880	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1035	Open in IMG/M
3300027973\|Ga0209298_10001037	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	18442	Open in IMG/M
3300031758\|Ga0315907_10407488	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1095	Open in IMG/M
3300031784\|Ga0315899_10241495	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1806	Open in IMG/M
3300031784\|Ga0315899_11422681	Not Available	586	Open in IMG/M
3300031857\|Ga0315909_10138123	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2030	Open in IMG/M
3300031857\|Ga0315909_10153531	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1892	Open in IMG/M
3300031857\|Ga0315909_10626482	Not Available	713	Open in IMG/M
3300031951\|Ga0315904_11152900	Not Available	600	Open in IMG/M
3300032050\|Ga0315906_10424429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1150	Open in IMG/M
3300032092\|Ga0315905_10858343	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	782	Open in IMG/M
3300032093\|Ga0315902_10280361	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1595	Open in IMG/M
3300032173\|Ga0315268_10483868	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1219	Open in IMG/M
3300032275\|Ga0315270_11072810	Not Available	535	Open in IMG/M
3300033816\|Ga0334980_0016968	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	3137	Open in IMG/M
3300033979\|Ga0334978_0196080	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	992	Open in IMG/M
3300033981\|Ga0334982_0172287	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1088	Open in IMG/M
3300033992\|Ga0334992_0002019	Not Available	15632	Open in IMG/M
3300033994\|Ga0334996_0020997	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4245	Open in IMG/M
3300034102\|Ga0335029_0001365	Not Available	19570	Open in IMG/M
3300034103\|Ga0335030_0165285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1565	Open in IMG/M
3300034104\|Ga0335031_0026522	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4236	Open in IMG/M
3300034104\|Ga0335031_0174985	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1469	Open in IMG/M
3300034200\|Ga0335065_0092855	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2056	Open in IMG/M
3300034284\|Ga0335013_0532605	Not Available	697	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.06%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	81.13%
Marine	Environmental → Aquatic → Marine	17.92%
Leaf	Host-Associated → Plants → Leaf	0.94%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	50.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	10.38%
Coastal	Environmental → Aquatic → Marine → Coastal	7.55%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.66%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.72%
River	Environmental → Aquatic → Freshwater → River	1.89%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	47.17%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	16.04%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	10.38%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.55%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.66%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.83%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.89%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.89%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.94%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	13.21%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.38%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.43%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	9.43%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	9.43%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	9.43%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.66%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.77%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.77%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.83%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.83%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.89%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.89%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.89%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.94%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.94%
Water Bodies	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Water Bodies	0.94%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.94%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005420	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007171	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007177	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projects	Environmental	Open in IMG/M
3300007618	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008339	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Sept 29, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300008510	Microbial Communities in Water bodies, Singapore - Site RA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011995	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 880 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental	Open in IMG/M
3300027578	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033994	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100349714	3300000756	Freshwater And Sediment	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEAAAIAQHE*
B570J29032_1094570472	3300002408	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVYMLNKPIFALVDDLMKVAEAPQEDALAEMA*
B570J40625_1001412755	3300002835	Freshwater	MLTKDQAFDINEFIYKNGHESLWRVGDSLEKILNELAINPNKDQIISKFVSKNGAKTVHTLNNAIFKLIEDLMKAEETIELTSI*
Ga0068879_15304942	3300005420	Freshwater Lake	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEEMVELQPA*
Ga0049081_100381054	3300005581	Freshwater Lentic	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEEIVELQPA*
Ga0049081_100884693	3300005581	Freshwater Lentic	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSQEAAAVSQHE*
Ga0049081_101807991	3300005581	Freshwater Lentic	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIIGKFVAKNGAKTLYTLNIAIFKLVDQLMLTEETAAVAQHE*
Ga0049080_102394803	3300005582	Freshwater Lentic	FDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEEIVELQPA*
Ga0078894_114121282	3300005662	Freshwater Lake	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVHMLNKPIFALVEDLMKVTEVIEENAELTPA*
Ga0102977_11026023	3300007171	Freshwater Lake	MTETTLTKDQLFDINEFIYQNGHESLWRVGDKLEKILNEISTRSDKQGKINKFLSKHGIRTVHAMRDSIFNLSKDLVQAEAVEAVEAEELPELEVV*
Ga0102978_12924973	3300007177	Freshwater Lake	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKILSEISARSDKQSKINKFLSKHGIRTVHAMRDSIFNLSKELVQAEEIKVEEVSEVETA*
Ga0102896_10569083	3300007618	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNELAVNPDKDQIIGKFVAKNGAKTLYTLNIAIFKLVDQLMLTEEAAAVAQHE*
Ga0105745_12464851	3300007972	Estuary Water	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSEEIAAAAQHE*
Ga0105747_11549882	3300007974	Estuary Water	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSQEAAAASQHE*
Ga0105748_100647374	3300007992	Estuary Water	EFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSQEAAAASQHE*
Ga0105748_101549264	3300007992	Estuary Water	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVYMLNKPIFALVDDLMKVAEAPQEDALVEM
Ga0108970_105401194	3300008055	Estuary	MLTKDQAFDISEFIYKNGHESLWRVGDGLEKILGELAINPNKEQIISKFVAKNGAKTVHTLNNAIFKLIEELMKAEESEIIAT*
Ga0114340_10229717	3300008107	Freshwater, Plankton	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKRGTKQVHMLNKPIFALVEDLMKVAEVAEENSELTTA*
Ga0114343_10011674	3300008110	Freshwater, Plankton	MLTKDQAFDISEFIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFMAKNGAKTVYTLNNAIFKLIEELMKAEETVELTTA*
Ga0114343_10584212	3300008110	Freshwater, Plankton	MLTKDQAFDINEFIFKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVVEENSELTTA*
Ga0114343_12150661	3300008110	Freshwater, Plankton	MLTKDQAFDISEFIYKNGHESLWRVGDILEKILNELAVNPEKEKIIGTFLTKNGSRTVHSLNNAIFKLTEDLLKIEELIKKESTFSKYEQQDIHLNS*
Ga0114346_100602020	3300008113	Freshwater, Plankton	ILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKINKFLSKHGAKTVHALNDSIFTLVKDLLKKEEVVEPQRA*
Ga0114346_10574104	3300008113	Freshwater, Plankton	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKAAEVTEENSELTPA*
Ga0114346_11928642	3300008113	Freshwater, Plankton	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTRQVHMLNKSIFALVDDLMKVTEAPQEEVLVEMT*
Ga0114346_12357732	3300008113	Freshwater, Plankton	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVDDLMKVAEAPQEDSLVEMV*
Ga0114346_12904061	3300008113	Freshwater, Plankton	TMLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPNKDQIISRFLSKHGTKQVHMLNKPIFALVEDLMKAAEVTEENSELTPA*
Ga0114363_100475233	3300008266	Freshwater, Plankton	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEEI*
Ga0114878_100523317	3300008339	Freshwater Lake	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEE
Ga0114880_12739661	3300008450	Freshwater Lake	IYKNSHESLWRVGDKLEKILSEFAINPNKDQIISRFLSKHGTKQVHMLNKPIFALVDDLMKVAEVVQEAPLVEVG*
Ga0110928_10818832	3300008510	Water Bodies	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKINKFLSKHGTKTVHALNDSIFSLVKDLLKKEETVELQPA*
Ga0104242_10118491	3300008962	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDILEKILNELAVNPEKEKIIGNFLTKNGSRTVHTLNNAIFKLTEDLLKIEELIKKESTFSKYEQQDIHLNS*
Ga0102864_11942721	3300009051	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSQEAAAASQHE*
Ga0102830_10441504	3300009059	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPGKDQIISKFVAKNGAKTLYTLNIAIFKLVDQLMLTEEAAAVAQHE*
Ga0114973_100026151	3300009068	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPNKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEAAAVAQHE*
Ga0102814_101580082	3300009079	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNALAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEAAAVAQHE*
Ga0114980_1000469610	3300009152	Freshwater Lake	MLTKDQAFDISEFIYKNSHESLWRVGDNLGKILNELSVNPDKDQIIGKFVAKNGAKTVYTLNNAIFNLVEQLMKIEETAESIQHE*
Ga0114968_100733505	3300009155	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSEEAAAVDQHE*
Ga0114977_102817522	3300009158	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNELAVNPDKDQIISKFVAKNGAKTLHTLNNAIFKLVDQLMLLEETSAIVQHE*
Ga0129333_101880491	3300010354	Freshwater To Marine Saline Gradient	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKVLSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKAAEVAEENSELTPA*
Ga0129333_104880013	3300010354	Freshwater To Marine Saline Gradient	MLTKDQAFDINEFIYKNGHESLWRVGDILEKILNELAVNPEKEKIIGNFLTKNGSRTVHTLNNAIFKLTEDLLKIEELIKKESAFSKYEQQDIHLNS*
Ga0129333_108576222	3300010354	Freshwater To Marine Saline Gradient	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPNKDQIISRFLSKHGTKQVHMLNKPIFALVDDLMKVAEVVQEAPLVEVG*
Ga0129336_103387212	3300010370	Freshwater To Marine Saline Gradient	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKINKFLSKHGAKTVHALNDSIFTLVKDLLKKEEMVELQPA*
Ga0153800_10239991	3300011995	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEETAAVAQHE*
Ga0153801_10261123	3300012017	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLYTLNIAIFKLVDQLMLTEETAAVAQHE*
Ga0157498_10021137	3300012666	Freshwater, Surface Ice	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLTEETAAVAQHE*
Ga0164293_101031163	3300013004	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVYMLNKPIFALVDDLMKVAEAPQEDALAEMV*
Ga0164294_112339241	3300013006	Freshwater	MLTKDQAFDISEFIYKNSHESLWRVGDNLGKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNNAIFNLVEQLMKIEETAE
Ga0164295_100613133	3300013014	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNNAIFNLVEQLMKIEETAESIQHE*
(restricted) Ga0172365_104564571	3300013127	Sediment	NRKIMLTKDQAFDINEFIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFVAKNGAKTVYTLNNAIFKLIEDLMKA*
Ga0177922_112439341	3300013372	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDDLGKILNELSVNPDKDQIIGKFVAKNGAKTVYTLNNAIFNLVEQLMKIEETVESIQHE*
Ga0181343_100253410	3300017766	Freshwater Lake	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEAPQEDSLVQMV
Ga0181343_10969802	3300017766	Freshwater Lake	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVAEENSELTTA
Ga0181358_11127173	3300017774	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLTEETAAVSQHE
Ga0181346_11762463	3300017780	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPGKDQIIGKFVAKNGSKTLHTLNNAIFDLI
Ga0181355_10941683	3300017785	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSEEAAAVSQHE
Ga0194113_1003095710	3300020074	Freshwater Lake	MLTKDQAFDIGEFIYKNGHKSLWQVGDRLEKILGEFAINPNKEQIISAFIVKNGAEKIYTLDNAIFKLIQELAKAEQPVELTMS
Ga0211732_13920323	3300020141	Freshwater	MLTKDQAFDINEFIYKNGHESLWRVGDSLEKILGELAINPNKEQIISKFVAKNGVKTLHTLNNAIFELVDQLMLLEETSAIVQHE
Ga0211732_15583242	3300020141	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNELAVNPDKDQIISKFVAKNGAKTLYTLNNAVFKLVDQLMLLEETSAVVQHE
Ga0211736_1074599410	3300020151	Freshwater	MLTKDQAFDINEFIYKNGHESLWRVGDSLEKILGELAINPNKEQIISKFVAKNGAKTLHTLNNAIFELVDQLMLLEETSAIVQHE
Ga0211734_111646098	3300020159	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFVAKNGAKTVYTLNNAIFKLIEELMKVEEAEILTT
Ga0211726_109034921	3300020161	Freshwater	FIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFVAKNGAKTVYTLNNAIFKLIEELMKVEEAEILTT
Ga0211726_109036603	3300020161	Freshwater	FIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFVAKNGAKTVYTLNNAIFKLIEELMKKEEPPTVEEELLTA
Ga0211729_101637203	3300020172	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNHLAINPNKEQIISKFLSKNGGKTVYTLNNAIFKVIEELMKAEETPEVIPT
Ga0222714_1001054310	3300021961	Estuarine Water	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEEMIEPQPA
Ga0222712_101324104	3300021963	Estuarine Water	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKINKFLSKHGAKTVHALNDSIFTLVKDLLKKEEVVEPQPA
Ga0222712_103381512	3300021963	Estuarine Water	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNELAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEAAAIAEHE
Ga0181353_11373811	3300022179	Freshwater Lake	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVVEENSELTTA
Ga0181351_11404352	3300022407	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSQEAAAVSQHE
Ga0244775_102763513	3300024346	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPGKDQIISKFVAKNGSKTLHTLNNAIFDLIEQLMEIEETTELT
Ga0244775_111833551	3300024346	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNELAVNPGKDQIIGKFVAKNGAKTLYTLNIAIFKLVDQLMLTEETAAVAQHE
Ga0244776_104878141	3300024348	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPGKDQIIGKFVAKNGAKTLYTLNIAIFKLVDQLMLTEETAAVAQHE
Ga0208307_10679902	3300027211	Estuarine	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSQEAAAASQHE
Ga0255075_10418533	3300027578	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDGLEKILGELAINPNKEQIISKFVAKNGAKTVHTLNNAIFKLIEELMKAEESEIIAT
Ga0255075_10932172	3300027578	Freshwater	MLTKDQAFDINEFIYKNGHESLWRVGDILEKILNELAVNPEKEKIIGNFLTKNGSRTVHSLNNAIFKLTEDLLKIEELIKKESTFSK
Ga0208975_10319634	3300027659	Freshwater Lentic	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEEIVELQPA
Ga0209297_10091145	3300027733	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPNKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEAAAVAQHE
Ga0209297_13087311	3300027733	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSQEAAAVAQHE
Ga0209087_10317288	3300027734	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPNKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEA
Ga0209597_100128930	3300027746	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGAKTLHTLNIAIFKLVDQLMLSEEAAAVAQHE
Ga0209596_10104129	3300027754	Freshwater Lake	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSEEAAAVDQHE
Ga0209972_1000059314	3300027793	Freshwater Lake	MTETILTKDQLFDINEFIYQNGHESLWRVGDKLEKVLGEIAICPEKDKKISKFLSKHGTKTVHALNDSIFTLVKDLLKKEEMVELQPA
Ga0209107_101858801	3300027797	Freshwater And Sediment	ISEFIYKNGHESLWRVGDNLEKILNGLAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSEEAAAIAQHE
Ga0209298_1000103727	3300027973	Freshwater Lake	MLTKDQAFDISEFIYKNSHESLWRVGDNLGKILNELSVNPDKDQIIGKFVAKNGAKTVYTLNNAIFNLVEQLMKIEETAESIQHE
Ga0315907_104074883	3300031758	Freshwater	TATMLTKDQAFDISEFIYKNGHESLWRVGDILEKILNELAVNPEKEKIIGTFLTKNGSRTVHSLNNAIFKLTEDLLKIEELIKKESTFSKYEQQDIHLNS
Ga0315899_102414953	3300031784	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFMAKNGAKTVYTLNNAIFKLIEELMKAEETVELTTA
Ga0315899_114226812	3300031784	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTRQVHMLNKSIFALVDDLMKVTEAPQEEVLVEMT
Ga0315909_101381234	3300031857	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDILEKILNELAVNPEKEKIIGTFLTKNGSRTVHSLNNAIFKLTEDLLKIEELIKKESTFSKYEQQDIHLNS
Ga0315909_101535311	3300031857	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPNKDQIISRFLSKHGTKQVHMLNKPIFALVDDLMKVAEVVQEAPLVEVG
Ga0315909_106264822	3300031857	Freshwater	MLTKDQAFDINEFIFKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVVEENSELTTA
Ga0315904_111529001	3300031951	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVVEENSELTTA
Ga0315906_104244292	3300032050	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTRQVHMLNKPIFALVDDLMKVAEAPQEDSLVEMV
Ga0315905_108583432	3300032092	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDKIINRFLSKHGTRQVHMLNKPIFALVDDLMKVAEAPQEDSLVEMV
Ga0315902_102803613	3300032093	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFMAKNGAKTVYTLNNAIFKLIEELMKALETVELTTA
Ga0315268_104838681	3300032173	Sediment	MLTKDQAFDISEFIYKNGHESLWRVGDDLEKILNGLAVNPDKNQIISKFVAKNGAKTLYTLNIAIFKLVDQLMLSEETAAVAQHE
Ga0315270_110728101	3300032275	Sediment	KDQAFDISEFIYKNGHESLWRVGDDLEKILNGLAVNPDKNQIISKFVAKNGAKTLYTLNIAIFKLVDQLMLSEETAAVAQHE
Ga0334980_0016968_775_1026	3300033816	Freshwater	MLTKDQAFDINEFIYKNGHESLWRVWDSLEKILGEFAINPNKEQIISKFVAKNGAKTVHTLNNAIFKLIEELMKAEESEIIAT
Ga0334978_0196080_12_278	3300033979	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVYMLNKPIFALVDDLMKVAEAPQEDALAEMV
Ga0334982_0172287_566_817	3300033981	Freshwater	MLTKDQAFDINEFIYKNGHESLWRVGDSLEKILGEFAINPNKEQIISKFVAKNGAKTVHTLNNAIFKLIEELMKAEESEIIAT
Ga0334992_0002019_12071_12328	3300033992	Freshwater	MLTKDQAFDISEFIYKNGHESLWRVGDNLEKILNELAVNPDKDQIISKFVAKNGSKTLHTLNIAIFKLVDQLMLSQEAAAVSQHE
Ga0334996_0020997_2061_2327	3300033994	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVYMLNKPIFALVDDLMKVAEAPQEDALAEMA
Ga0335029_0001365_15683_15949	3300034102	Freshwater	MLTKDQAFDINEFIDKNSHESLWRVGDKLEKTLSEFAINSNKDQIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVAEENSELTPA
Ga0335030_0165285_30_296	3300034103	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINSNKDQIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVAEENSELTPA
Ga0335031_0026522_2916_3182	3300034104	Freshwater	MLTKDQAFDINEFIDKNSHESLWRVGDKLEKILSEFAINPDKDKIINRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVAEENSELTPA
Ga0335031_0174985_891_1157	3300034104	Freshwater	MLTKDQAFDINEFIDKNSHESLWRVGDKLEKTLSEFAINSNKDQIINRFLSKHGTKQVYMLNKPIFALVDDLMKVAEAPQEDALAEMA
Ga0335065_0092855_1122_1388	3300034200	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPNKDQIISRFLSKHGTKQVHMLNKPIFALVEDLMKVAEVAEENSELTPA
Ga0335013_0532605_442_696	3300034284	Freshwater	MLTKDQAFDINEFIYKNSHESLWRVGDKLEKTLSEFAINPDKDQIISRFLSKHGTKQVYMLNKPIFALVDDLMKVAEAPQEDALA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters