Metagenome Family F093359

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093359
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	77 residues
Representative Sequence	QKGAAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSTLSDRETNRPESGAT
Number of Associated Samples	38
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.83 %
% of genes near scaffold ends (potentially truncated)	96.23 %
% of genes from short scaffolds (< 2000 bps)	96.23 %
Associated GOLD sequencing projects	37
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.774 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (69.811 % of family members)
Environment Ontology (ENVO)	Unclassified (69.811 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.528 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.43% β-sheet: 0.00% Coil/Unstructured: 42.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF10009	DUF2252	37.74
PF09335	SNARE_assoc	0.94
PF01663	Phosphodiest	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.94
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.77 %
Unclassified	root	N/A	46.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.77 %
Unclassified	root	N/A	46.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.77 %
Unclassified	root	N/A	46.23 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.17 %
Unclassified	root	N/A	46.23 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.17 %
Unclassified	root	N/A	46.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.23 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	2.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.23 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	2.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.23 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.23 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	1.89 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.23 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1.89 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10081885	Not Available	567	Open in IMG/M
3300005562\|Ga0058697_10732069	Not Available	529	Open in IMG/M
3300007004\|Ga0079218_13804247	Not Available	513	Open in IMG/M
3300007790\|Ga0105679_10619593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1524	Open in IMG/M
3300009789\|Ga0126307_10525482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300009789\|Ga0126307_11111283	Not Available	639	Open in IMG/M
3300009789\|Ga0126307_11262755	Not Available	598	Open in IMG/M
3300009789\|Ga0126307_11684259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	515	Open in IMG/M
3300009789\|Ga0126307_11741966	Not Available	507	Open in IMG/M
3300009840\|Ga0126313_10096895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2163	Open in IMG/M
3300009840\|Ga0126313_10268647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1326	Open in IMG/M
3300009840\|Ga0126313_10368728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1135	Open in IMG/M
3300009840\|Ga0126313_10416861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300009840\|Ga0126313_10521559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300009840\|Ga0126313_10648385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300010036\|Ga0126305_10345185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300010036\|Ga0126305_10503280	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300010036\|Ga0126305_10689734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300010036\|Ga0126305_10934100	Not Available	593	Open in IMG/M
3300010036\|Ga0126305_11070525	Not Available	554	Open in IMG/M
3300010037\|Ga0126304_10319864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1029	Open in IMG/M
3300010037\|Ga0126304_10728722	Not Available	671	Open in IMG/M
3300010037\|Ga0126304_10730503	Not Available	670	Open in IMG/M
3300010038\|Ga0126315_10108735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1600	Open in IMG/M
3300010038\|Ga0126315_10127678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300010038\|Ga0126315_10742443	Not Available	643	Open in IMG/M
3300010038\|Ga0126315_10807832	Not Available	618	Open in IMG/M
3300010039\|Ga0126309_10066963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1765	Open in IMG/M
3300010039\|Ga0126309_10255292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300010039\|Ga0126309_10578073	Not Available	704	Open in IMG/M
3300010039\|Ga0126309_10671680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300010039\|Ga0126309_10844140	Not Available	602	Open in IMG/M
3300010039\|Ga0126309_10865671	Not Available	596	Open in IMG/M
3300010039\|Ga0126309_10993964	Not Available	563	Open in IMG/M
3300010040\|Ga0126308_10144488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1497	Open in IMG/M
3300010040\|Ga0126308_10416105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300010040\|Ga0126308_10504499	Not Available	818	Open in IMG/M
3300010040\|Ga0126308_10524256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300010041\|Ga0126312_10024063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4063	Open in IMG/M
3300010041\|Ga0126312_10368125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1020	Open in IMG/M
3300010041\|Ga0126312_10384806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300010041\|Ga0126312_10390877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	988	Open in IMG/M
3300010041\|Ga0126312_10402725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	973	Open in IMG/M
3300010041\|Ga0126312_10956476	Not Available	626	Open in IMG/M
3300010041\|Ga0126312_10986835	Not Available	616	Open in IMG/M
3300010041\|Ga0126312_11119423	Not Available	579	Open in IMG/M
3300010041\|Ga0126312_11390923	Not Available	520	Open in IMG/M
3300010042\|Ga0126314_10370943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1029	Open in IMG/M
3300010042\|Ga0126314_10428118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300010042\|Ga0126314_10608151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300010042\|Ga0126314_10942368	Not Available	639	Open in IMG/M
3300010042\|Ga0126314_11039963	Not Available	609	Open in IMG/M
3300010042\|Ga0126314_11050919	Not Available	605	Open in IMG/M
3300010042\|Ga0126314_11257537	Not Available	554	Open in IMG/M
3300010044\|Ga0126310_10000289	All Organisms → cellular organisms → Bacteria	15994	Open in IMG/M
3300010044\|Ga0126310_10058715	All Organisms → cellular organisms → Bacteria	2172	Open in IMG/M
3300010044\|Ga0126310_10198427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1318	Open in IMG/M
3300010044\|Ga0126310_10458673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300010044\|Ga0126310_10592989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300010044\|Ga0126310_10663118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300010044\|Ga0126310_10771739	Not Available	736	Open in IMG/M
3300010044\|Ga0126310_10914565	Not Available	684	Open in IMG/M
3300010044\|Ga0126310_11167810	Not Available	616	Open in IMG/M
3300010044\|Ga0126310_11309883	Not Available	586	Open in IMG/M
3300010044\|Ga0126310_11744957	Not Available	518	Open in IMG/M
3300010045\|Ga0126311_10144686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1687	Open in IMG/M
3300010045\|Ga0126311_10615805	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300010045\|Ga0126311_10732204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300010045\|Ga0126311_10800227	Not Available	760	Open in IMG/M
3300010045\|Ga0126311_11350173	Not Available	594	Open in IMG/M
3300010045\|Ga0126311_11364265	Not Available	591	Open in IMG/M
3300010045\|Ga0126311_11684431	Not Available	535	Open in IMG/M
3300010166\|Ga0126306_10457859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300010166\|Ga0126306_10488088	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300010166\|Ga0126306_10930413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300010166\|Ga0126306_11073452	Not Available	658	Open in IMG/M
3300010166\|Ga0126306_11120801	Not Available	644	Open in IMG/M
3300010166\|Ga0126306_11240208	Not Available	614	Open in IMG/M
3300012680\|Ga0136612_10434870	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300014487\|Ga0182000_10161962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300014487\|Ga0182000_10182837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300018422\|Ga0190265_12043890	Not Available	678	Open in IMG/M
3300018432\|Ga0190275_10470183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300018432\|Ga0190275_11949066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	666	Open in IMG/M
3300018466\|Ga0190268_10680928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300018466\|Ga0190268_10690588	Not Available	747	Open in IMG/M
3300018469\|Ga0190270_10646907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1039	Open in IMG/M
3300018481\|Ga0190271_10504002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300018920\|Ga0190273_11226176	Not Available	641	Open in IMG/M
3300019377\|Ga0190264_10595030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300019767\|Ga0190267_10992339	Not Available	588	Open in IMG/M
3300019767\|Ga0190267_11066618	Not Available	576	Open in IMG/M
3300019767\|Ga0190267_11465541	Not Available	523	Open in IMG/M
3300028778\|Ga0307288_10103991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1037	Open in IMG/M
3300028880\|Ga0307300_10230521	Not Available	609	Open in IMG/M
3300031548\|Ga0307408_100996131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300031731\|Ga0307405_11657233	Not Available	566	Open in IMG/M
3300031824\|Ga0307413_10654751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300031903\|Ga0307407_10500410	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300031995\|Ga0307409_101518930	Not Available	697	Open in IMG/M
3300032004\|Ga0307414_10947975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300032005\|Ga0307411_11825874	Not Available	565	Open in IMG/M
3300032126\|Ga0307415_100672118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	931	Open in IMG/M
3300032159\|Ga0268251_10203066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300032159\|Ga0268251_10558839	Not Available	520	Open in IMG/M
3300034132\|Ga0334915_075646	Not Available	690	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.62%
Host-Associated	Host-Associated	10.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.68%
Plants	Host-Associated → Plants	10.38%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.55%
Phylloplane	Host-Associated → Plants → Phylloplane	2.83%
Freshwater	Environmental → Aquatic → Freshwater	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.83%
Ice	Environmental → Aquatic → Freshwater → Ice	0.94%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.94%
Sand	Environmental → Terrestrial → Soil → Sand	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	84.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.55%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.94%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.94%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	69.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	7.55%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.94%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_100818851	3300000858	Soil	AAASGALLGASLVGARFPRLVAWPLTAVGAFLGGLGVVRAARLTLSERGQDSPESGAT*
Ga0058697_107320691	3300005562	Agave	ATISRVVPTIVQKGTAPLQTHEHAMAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVLRAVQSALSDGKEDGP*
Ga0079218_138042472	3300007004	Agricultural Soil	GSGATVSRVVPTLIQKGAAPLQTHEHAIAAAASGALLGASLVGARFPRLVAWPLTAVGAFLGGLGIVRAVQSTLADREPDRPESGAT*
Ga0105679_106195931	3300007790	Soil	EHALAAATSGALLGVSLLGARFPRLVAWPLATVGVLFGGLGMVRAARSALIDRTP*
Ga0126307_105254823	3300009789	Serpentine Soil	GSGATVSRVVPTLVQKGAAPLQTHEHALAAAASGALLGVSLLGARFPRLVAWPLVAVGAFLGGLGVLRAAQSRLSESEEDRPESGAT*
Ga0126307_111112832	3300009789	Serpentine Soil	GATVSRVGTTILQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAARLAFSDRPGSGAT*
Ga0126307_112627551	3300009789	Serpentine Soil	RVVPTLVQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPIVAVGAFLGGLGVLRAAQSTLSESEEERPESGAP*
Ga0126307_116842591	3300009789	Serpentine Soil	GATVSRVVPTLVQKGAAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSTLSDRETNRPESGAT*
Ga0126307_117419661	3300009789	Serpentine Soil	IAAAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLGVVRAVQSTLSESEEDRPESGAT
Ga0126313_100968951	3300009840	Serpentine Soil	GSGATVSRVGTTILQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAARQAFSDRRGSGTT*
Ga0126313_102686471	3300009840	Serpentine Soil	MVPTIVQKGAAPLKTHEHAIAVAASGALLGVSLLGARFPRLIAWPLVAVGAFLGGLGVVRAARSTLSDSKQNRPESGAP*
Ga0126313_103687283	3300009840	Serpentine Soil	SRVVPTLVQKGAAPLQTHEHALAAAASGTLLGVSLLGARFPRLVAWPLVAVGAFLGGLGVLRAAQSTLSNPEEDRPEAGAT*
Ga0126313_104168613	3300009840	Serpentine Soil	ATVSRVVPTLIQKGAAPLQTHEHAIAAAASGVLLGTSLLGARFPRLVAWPLVVVGAFLGGLGVLRAAQSTLSDRGQDSGAP*
Ga0126313_105215591	3300009840	Serpentine Soil	GSGTGSGATVSRVVPTLVQKGAAPLQTHEHAIAAAASGVLLGASLLGARFPRLVAWPLTAVGAFIGGLGVLRAAQSTLSESEEDRPESGAT*
Ga0126313_106483851	3300009840	Serpentine Soil	RAGVVGSGTGSGATVSRVVPTLVQKGTAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAIGAFLGGLGVLRAAQSTLSESEERPESGAT*
Ga0126305_103451853	3300010036	Serpentine Soil	VGSGTGSGATISRMVPTLVQKGTAPLQTHEHAIAAAASSALLGVSLLGARFPRLVAWPLTALGAFLGGLGVLRAIQSTLSNREKDRPESGAT*
Ga0126305_105032801	3300010036	Serpentine Soil	TLVQKGTAPLQTHEHAIAVAASGALLGASLLGTRFPRLVAWPLTAVGTFPGGLGVLRAVRSMLSDRGPDRPKSDSI*
Ga0126305_106897341	3300010036	Serpentine Soil	PLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAIGAFLGGLGVLRAAQSTLSESEERPESGAT*
Ga0126305_109341001	3300010036	Serpentine Soil	AAPLKTHEHAIAVAASGTLLGVSLLGARFPRLIAWPLVAVGAFLGGRGVVRTNRSTLSDSKQNRPESGAP*
Ga0126305_110705252	3300010036	Serpentine Soil	VPTLFQKGAAPLRTHEHAIAAAASGALLGASLLGARFPRLVAWPLVAVGAFLGGLGVVRAAQSTLSESEEDRPESGAA*
Ga0126304_103198641	3300010037	Serpentine Soil	KGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAARLAFSDRPGSGAT*
Ga0126304_107287222	3300010037	Serpentine Soil	QTHEHAIAAAASGALLGVSLLGARFPRLIAWPLVAVGALLGGLGVVRAVQSTLSESEEERPESGAM*
Ga0126304_107305033	3300010037	Serpentine Soil	MVPTLVQKGTAPLQTHEHAIAAAASGALLGVSVLGARFPRLVAWPLTAVGAVLGGLGVLRAIQSTLSNRKKDRPESGAT*
Ga0126315_101087353	3300010038	Serpentine Soil	SRVGTTVFRKGAAPLRTHEHAIAVAASGALLGASLVGARFPRLIAWPLTTVGALLGGLGVLRAVQSTLSDREPHRPEPGAT*
Ga0126315_101276781	3300010038	Serpentine Soil	APLQTHEHAIAAAVSGALLGVSLLGARFPRLVAWPIVAVGAFLGGLGVLRAAQSTLSESEERPESGAT*
Ga0126315_107424431	3300010038	Serpentine Soil	HEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSRLSDREPERPKSGVS*
Ga0126315_108078322	3300010038	Serpentine Soil	SRVGTSVLQKGAAPLQTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAMGAALGGLGLVRAARSALSDRPGSGAT*
Ga0126309_100669631	3300010039	Serpentine Soil	QTHEHALAAAASGALLGASLLGARFPRVVAWPLTAVGALLGGLGVVRAARLAFSDRPGSGAT*
Ga0126309_102552923	3300010039	Serpentine Soil	MQTHEHAIAVAASGALLGASLLGARFPRLIAWPLVAVGAFLGGLGVLRAIQSTLSDRKPDQDAP*
Ga0126309_105780731	3300010039	Serpentine Soil	TLFQKGAAPLQTHEHALAVAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLGVVRAVQSTLSESEEDRPEAGAM*
Ga0126309_106716801	3300010039	Serpentine Soil	EHALAAAASGALLGASLLGARFPRLVAWPIVAVGAFLGGLGVLRAAQSTLSESEEERPESGAT*
Ga0126309_108441401	3300010039	Serpentine Soil	ATISRVVPTLVQKGAAPLQTHEHALAAAASGALLGVSLLGARFPRLIAWPLVAVGAFLGGLGVLRAAQSTLSDREEDRTESGAT*
Ga0126309_108656712	3300010039	Serpentine Soil	MVPTLVQKGTAPLQTHEHAIAVGASGALLGVSLLGARFPRLVAWPLTAVGAFLGGLGVLRAVRSTLSDRAQDGPESGAT*
Ga0126309_109939642	3300010039	Serpentine Soil	GVVGSGTGSGATISRVVPTLVQKGAAPLRTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLRVVRKEKSTLSESEEDRPEAGAT*
Ga0126308_101444881	3300010040	Serpentine Soil	QTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFIGGLGVLRAVQSTLSDREPERPESGAS*
Ga0126308_104161051	3300010040	Serpentine Soil	TVSRVVPTLIQKGTAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSRLSDREPERPKSGVS*
Ga0126308_105044993	3300010040	Serpentine Soil	ATVSRVGTTILQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAARLAFSDRPGSRAT*
Ga0126308_105242561	3300010040	Serpentine Soil	AAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVVRAARLTLSDREPDRPESGAT*
Ga0126312_100240631	3300010041	Serpentine Soil	TVSRVVPTLVQKGTAPLQTHEHAIAAAASGVLLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAAQSTLSESEEDRPESGAT*
Ga0126312_103681251	3300010041	Serpentine Soil	PLQTHEHALAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAARLAFSDRPGSGAT*
Ga0126312_103848061	3300010041	Serpentine Soil	AIAVATSGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSTLSDGEQDSGNSGAS*
Ga0126312_103908772	3300010041	Serpentine Soil	QKGAAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSTLSDRETNRPESGAT*
Ga0126312_104027253	3300010041	Serpentine Soil	PLQTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGAFLGGLGVVRAARSTLSDRVPGSNPDRPKAGAT*
Ga0126312_109564761	3300010041	Serpentine Soil	GVGATFSRVGTTLVQKGAAPRQTHEHALAVAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVVRAARSTLSDREPDRPESGAT*
Ga0126312_109868351	3300010041	Serpentine Soil	GVGATFSRVGTTLVQKGAAPRQTHEHAIAAAASGALLGASLVGARFPRLVAWPLTAVGAFLGGLGVVRAARLTLSDREQDRPESGAT*
Ga0126312_111194231	3300010041	Serpentine Soil	TGSGATLSRVGTTVFQKGTAPLQTHEHVMAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSTLSNREKDRTESGVT*
Ga0126312_113909232	3300010041	Serpentine Soil	VGSGTGSGATISRMVPTLVQKGTAPLQTHEHAMAVAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAIQSTLSNREKDRPESGTT*
Ga0126314_103709433	3300010042	Serpentine Soil	VQKGTAPLKTHEHAIAVAASGTLLGVSLLGARFPRLIAWPLVAVGAFLGGLGVVRAARSTLSDSKQNRPESGAP*
Ga0126314_104281183	3300010042	Serpentine Soil	KGAAPLQTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLGVVRAVQSTLSDREEDRPESGAM*
Ga0126314_106081511	3300010042	Serpentine Soil	MAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGLVRAARSTLSDREQDPDSP*
Ga0126314_109423682	3300010042	Serpentine Soil	GVVGSGTGSGATISRVVPTLVQKGAAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSRLSESEEDRPESGAT*
Ga0126314_110399631	3300010042	Serpentine Soil	RAGVAGSGTGSGATLSRVSTTVFQKGAAPLRTHEHVLAVGASGALLGASLLGARFPRLVAWPLTAVGALLGGLGLVRAARSTLSEREKERPESGAT*
Ga0126314_110509191	3300010042	Serpentine Soil	IQKGTAPLQTHEHAIAAAVSGALLGVSLLGARFPRLVAWPLTAVGAILGGLGVLRAIQSRLSDREPERPKSGMS*
Ga0126314_112575371	3300010042	Serpentine Soil	TTILQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAARQAFSDRRGSGTT*
Ga0126310_100002891	3300010044	Serpentine Soil	PLQTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLGVLRAAKSTLTDRESDRPKPGATS*
Ga0126310_100587154	3300010044	Serpentine Soil	VPTLVQKGAAPVQRHEHALAAAASGVLLGASLLGARFPRLVAWPLVAVGAFLGGLGVLRAAQSTLSDREEDRPEAGTT*
Ga0126310_101984271	3300010044	Serpentine Soil	SGATLSRVVPTLAQKGAAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLVAVGAFVGGLGVLRAAKSTLSHREEERPDAGAT*
Ga0126310_104586731	3300010044	Serpentine Soil	ISRMVPTIVQKGAAPLKTHEHAIAVAASGALLGVSLLGARFPRLIAWPLVAVGAFLGGLGVLRAVQSTLSDSKQNRPESGAP*
Ga0126310_105929891	3300010044	Serpentine Soil	RTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGVFLGGLGVLRAVQSTLSESEEDRPESGAM*
Ga0126310_106631181	3300010044	Serpentine Soil	VQKGAAPLQTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGAFLGGLGVLRAARSTLSDREAERPGSDVM*
Ga0126310_107717393	3300010044	Serpentine Soil	VGTTVFQKGTAPLRTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAIQSAISEREPDRPESDAT*
Ga0126310_109145651	3300010044	Serpentine Soil	TGSGAALSRVGTTVFQKGTAPLQTHEHAIAAAASGALLGASLLGARFPRLIAWPLVTVGAFLGGLGVLRAIQSTLSNRENDSPESGAT*
Ga0126310_111678102	3300010044	Serpentine Soil	VGGGTGSGATISRVVPTLVQKGTAPMQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTAVGAFLGGLGVLRAVQSTLSDREQDLGAS*
Ga0126310_113098831	3300010044	Serpentine Soil	QTHEHAIAAAASGALLGASLVGARFPRLVAWPLTAIGAFLGGLGVLRAVQPTLSESEPERPESGVS*
Ga0126310_117449573	3300010044	Serpentine Soil	GATISRLVPTLVQKGAAPLQTHEHAIAVAASGALLGASLVGARFPRLVAWPLTAAGAFLGGLGLLRATQAALSDSKPDRPESGAT*
Ga0126311_101446863	3300010045	Serpentine Soil	GATVSRVVPTLIQKGAAPLQTHEHAIAAAASGVLLGTSLLGARFPRLVAWPLVVVGAFLGGLGVLRAAQSTLSDRGQDSGAP*
Ga0126311_106158051	3300010045	Serpentine Soil	SGTGSGATVSRVVPTLAQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPLVAVGAFLGGLGVLRAARSTLSDRKADRPESDGT*
Ga0126311_107322041	3300010045	Serpentine Soil	GATLSRVSTTVFQKGAAPLRTHEHVLAVGASGALLGASLLGARFPRLVAWPLTAVGALLGGLGLLRAARSTLSEREKERPESGAT*
Ga0126311_108002273	3300010045	Serpentine Soil	GTTLVQKGAAPRQTHEHAIAAAASGALLGASLVGARFPRLVAWPLTAVGAFLGGLGVVRAARLTLSDREQDRPESGAT*
Ga0126311_113501732	3300010045	Serpentine Soil	LSRVSTTVFQKGAAPLRTHEHVLAVGASGALLGASLLGARFPRLVAWPLTAVGALLGGLGLVRAARSTLSEREKERPESGAT*
Ga0126311_113642651	3300010045	Serpentine Soil	SRVVPTLVQKGAAPLRTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLGVVRAVQSTLSDPEEDRPESGAM*
Ga0126311_116844311	3300010045	Serpentine Soil	SARAGVVGSGTGSGATVSRMVPTLVQKGAAPVQRHEHALAAAASGVLLGASLLGARFPRLVAWPLVAVGAFLGGLGVLRAAQSTLSDREEDRPEAGTT*
Ga0126306_104578591	3300010166	Serpentine Soil	TAPLQTHEHAIAAAVSGALLGASLLGARFPRLVAWPLTAIGAFLGGLGVLRAVQSRLSDREPERPKSGVS*
Ga0126306_104880881	3300010166	Serpentine Soil	RVVPTLVQKGAAPLQTHEHALAAAASGTLLGVSLLGARFPRLVAWPLVAVGAFLGGLGVLRAAQSTLSESEEDRPEPGAT*
Ga0126306_109304131	3300010166	Serpentine Soil	GTAPLQTHEHAIAAAVSGALLGASLLGARFPRLVAWPLTAIGAFLGGLGVLRAAQSTLSESEEDRPESGAT*
Ga0126306_110734521	3300010166	Serpentine Soil	RVGTTILQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVVRAARLAFSDRPGSGAT*
Ga0126306_111208011	3300010166	Serpentine Soil	QKGAAPLRTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLGVVRAVQSTLSESEEDRPEAGAT*
Ga0126306_112402083	3300010166	Serpentine Soil	LQTHEHAIAAAASGALLGVSVLGARFPRLVAWPLTAVGAVLGGLGVLRAIQSTLSNRKKDRPESDAT*
Ga0136612_104348702	3300012680	Polar Desert Sand	QEHPLAVAASGALLGASLIGARYPRLVAWPLTAVGGALGGLGLLRAAQRRFSE*
Ga0182000_101619621	3300014487	Soil	EHAIAFAASGALLVASLVGARFPRLLAWPLTALGAFLGGLGLLRAIRSRFSDREKERPESGAT*
Ga0182000_101828371	3300014487	Soil	PTLVQKGAAPLQTHEHALAAAASGALLGVSLLGARFPRLVAWPLVAVGAFLGGLGILRAAQSTLSDPEEDRPESGAT*
Ga0190265_120438901	3300018422	Soil	TLVQKGAAPLQTHEHALAAAASGTLLGVSLLGARFPRLVAWPLVAVGAFLGGLGVLRAAQSTLSESEEDRQESGAT
Ga0190275_104701833	3300018432	Soil	RTHEHAIAAAASGALLGVSLLGARFPRLVAWPLVAVGAFLGGLGVVRAVQSTLSDREEDRPESGAM
Ga0190275_119490661	3300018432	Soil	PLQAHEHAIAAAASGALLGVSLLGARFPRLIAWPLVAVGAFLGGLGVLRAAQSTLSDREQDSSPL
Ga0190268_106809281	3300018466	Soil	RVVPTLVQKGAAPLQTHEHAMAAAASGALLGASLVGARFPRLVAWPLTAVGAFLGGLGIVRAVQSTLADREEDRPESGAT
Ga0190268_106905881	3300018466	Soil	RARAGVVGSGTGSGATLSRVGTTVFQKGTAPLQTHEHAIAAAASGALLGASLLGARFPRLVAWPLTALGAFLGGLGVVRAVKSTLSDREKDRHESDAT
Ga0190270_106469071	3300018469	Soil	TISRVGTTLVQKGAAPQQTHEHALAAAASGALLGVSLLGARFPRLVAWPLVAVGALLGGLGVVRAVQSTLSESEEDRPESGAI
Ga0190271_105040023	3300018481	Soil	ERAIAVAASGALLGASLLGARFPRLIAWPLTALGALLGGLGVLRAIQSTLSNREEDQPESGAT
Ga0190273_112261762	3300018920	Soil	GVVGSGTGSGATVSRVVPTLIQKGAAPLQTHEHAIAVAASGALLGASLLGARFPRLIAWPLTAVGAFLGGLGILRAVQSTLSDQEQDRPESGTT
Ga0190264_105950303	3300019377	Soil	GVVGSGTGSGATISRVVPTLLQKGAAPLQTHEHAIAVAASGALLGASLLGARFPRLIAWPLTAMGALLGGLGLVRAVQSTLSDREKDSGAP
Ga0190267_109923392	3300019767	Soil	VVGSGTGSGATLSRVGTTVFQKGTAPLQTHEHAIAVAASGALLGASLLGARFPRLVAWPLTTVGAVLGGLGVLRAVKSTLADRGTESDAT
Ga0190267_110666181	3300019767	Soil	TVFQKGTAPLRTHEHAIAVAASGALLGASVLGARFPRLIAWPLTAVGALLGGLGVLRAVQSTLSNREPDRP
Ga0190267_114655412	3300019767	Soil	VGSGTGSGATVSRVVPTLVQKGAAPLKTHEHAIAAAASGALLGASLLGARFPRLVAWPLVAVGAFVGGLGVLRAAKSTLSHREEERPDAGAT
Ga0307288_101039911	3300028778	Soil	AAPRQAHEHAIAAAASGALLGASLVGARFPRLVAWPLTAVGAFLGGLGVVRAARLTLSDREQDRPESGAT
Ga0307300_102305211	3300028880	Soil	ATLSRVVPTIVQKGAAPLQTHEHAMAAAASGALLGASLVGARFPRLVAWPLTAVGAFLGGLGVVRAARSTLSDREKDRPESGAT
Ga0307408_1009961311	3300031548	Rhizosphere	RVVPTLVQKGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPIVAVGAFLGGLGVLRAAQSTLSESEEERPESGAT
Ga0307405_116572332	3300031731	Rhizosphere	APLQTHEHAIAAAASGALLGVSLIGARFPRLVAWPLVAVGAFLGGLGVLRAAQSTLSDREEDRPESGAT
Ga0307413_106547513	3300031824	Rhizosphere	GATLSRIGTTLVQKGTAPLQTHEHAIAAAASGALLGASLLGARFPRLIAWPLVTVGAFLGGLGVLRAIQSTLSNRENDSPESGAT
Ga0307407_105004103	3300031903	Rhizosphere	KGAAPLQTHEHALAAAASGALLGASLLGARFPRLVAWPIVAVGAFLGGLGVLRAAQSTLSESEEERPESGAT
Ga0307409_1015189301	3300031995	Rhizosphere	TLVQKGAAPLGTREHALAAATSGALLGASLVGARFPRLVAWPLVAVGAFLGGLGVVRAARSTFSERMTD
Ga0307414_109479751	3300032004	Rhizosphere	LQTHEHAIAAAASGALLGASLLGARFPRLVAWPLVAVGAFLGGLGVLRAIRSTLSNREPDRPESGAT
Ga0307411_118258742	3300032005	Rhizosphere	RTHEHAIAVAASGALLGVSLLGARFPRLIAWPLTAVGALLGGLGVLRAVQSTLSNREPDRPESGAT
Ga0307415_1006721182	3300032126	Rhizosphere	VGTTLFQKGAAPLQTHEHAIAAAASGALLGASLIGARFPRLVAWPLVTVGAFLGGLGVVRAARSTFSERMTD
Ga0268251_102030663	3300032159	Agave	EHALAAGASGALLGVSLLGARFPRLVAWPLVAVGAFLGGLGVLRAAQSTLSDREEDRPESGAT
Ga0268251_105588392	3300032159	Agave	SRVVPTIVQKGTAPLQTHEHAMAAAASGALLGASLLGARFPRLVAWPLTAVGALLGGLGVLRAVQSALSDGKEDGP
Ga0334915_075646_3_206	3300034132	Hypolithic Biocrust	MQTHEHAIALAASGGLLGVSLVAARFPRLLAWPLTAVGAFLGGLGVLRAIKSTLSDRKSDHSESGAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093359

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences