Metagenome / Metatranscriptome Family F093446

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093446
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	74 residues
Representative Sequence	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNIIAQSVSRSQIASDAVFQCPNCQTFNEVE
Number of Associated Samples	88
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	44.34 %
% of genes near scaffold ends (potentially truncated)	32.08 %
% of genes from short scaffolds (< 2000 bps)	88.68 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (50.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (31.132 % of family members)
Environment Ontology (ENVO)	Unclassified (45.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.774 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.00% β-sheet: 44.00% Coil/Unstructured: 52.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01938	TRAM	17.92
PF00571	CBS	2.83
PF02518	HATPase_c	2.83
PF13610	DDE_Tnp_IS240	1.89
PF02426	MIase	0.94
PF00106	adh_short	0.94
PF07460	NUMOD3	0.94
PF00338	Ribosomal_S10	0.94
PF04055	Radical_SAM	0.94
PF00753	Lactamase_B	0.94
PF00085	Thioredoxin	0.94
PF00210	Ferritin	0.94
PF02709	Glyco_transf_7C	0.94
PF16360	GTP-bdg_M	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0051	Ribosomal protein S10	Translation, ribosomal structure and biogenesis [J]	0.94
COG4829	Muconolactone delta-isomerase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.83 %
Unclassified	root	N/A	47.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.83 %
Unclassified	root	N/A	47.17 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	50.00 %
Unclassified	root	N/A	47.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	12.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	10.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.94 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	6.60 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	3.77 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	6.60 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.94 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.94 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.94 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	0.94 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	6.60 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	0.94 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.94 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	2.83 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	0.94 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	0.94 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.94 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
unclassified Nitrososphaera	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera	1.89 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	0.94 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.94 %
Flavihumibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter	0.94 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.94 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.17 %
Nitrososphaera sp. AFS	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	1.89 %
Flavihumibacter solisilvae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter solisilvae	0.94 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	0.94 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	0.94 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.94 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.94 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.94 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0901983	All Organisms → cellular organisms → Archaea	1636	Open in IMG/M
3300000041\|ARcpr5oldR_c020117	Not Available	595	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10200549	Not Available	500	Open in IMG/M
3300000953\|JGI11615J12901_10701597	All Organisms → cellular organisms → Archaea	1162	Open in IMG/M
3300000953\|JGI11615J12901_11539217	Not Available	819	Open in IMG/M
3300001989\|JGI24739J22299_10044369	All Organisms → cellular organisms → Archaea	1464	Open in IMG/M
3300002568\|C688J35102_120628960	Not Available	1265	Open in IMG/M
3300004114\|Ga0062593_100297656	All Organisms → cellular organisms → Archaea	1372	Open in IMG/M
3300004114\|Ga0062593_100585132	Not Available	1060	Open in IMG/M
3300004114\|Ga0062593_100709698	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300004463\|Ga0063356_105649155	All Organisms → cellular organisms → Archaea	537	Open in IMG/M
3300004480\|Ga0062592_100839661	All Organisms → cellular organisms → Archaea	820	Open in IMG/M
3300004801\|Ga0058860_11846509	All Organisms → cellular organisms → Archaea	630	Open in IMG/M
3300005187\|Ga0066675_10889291	Not Available	673	Open in IMG/M
3300005341\|Ga0070691_10099021	All Organisms → cellular organisms → Archaea	1446	Open in IMG/M
3300005356\|Ga0070674_102004832	Not Available	527	Open in IMG/M
3300005434\|Ga0070709_10160492	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	1563	Open in IMG/M
3300005437\|Ga0070710_10743983	Not Available	696	Open in IMG/M
3300005439\|Ga0070711_100735100	Not Available	833	Open in IMG/M
3300005466\|Ga0070685_11098917	Not Available	601	Open in IMG/M
3300005535\|Ga0070684_100970362	Not Available	797	Open in IMG/M
3300005560\|Ga0066670_10713760	Not Available	607	Open in IMG/M
3300005842\|Ga0068858_101190330	Not Available	749	Open in IMG/M
3300006046\|Ga0066652_101430935	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Flavihumibacter → Flavihumibacter solisilvae	645	Open in IMG/M
3300006845\|Ga0075421_100112395	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	3423	Open in IMG/M
3300006854\|Ga0075425_100688512	All Organisms → cellular organisms → Archaea	1174	Open in IMG/M
3300006871\|Ga0075434_101203731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	770	Open in IMG/M
3300006903\|Ga0075426_11010472	All Organisms → cellular organisms → Archaea	629	Open in IMG/M
3300006914\|Ga0075436_101019560	Not Available	622	Open in IMG/M
3300010038\|Ga0126315_10130989	All Organisms → cellular organisms → Archaea	1470	Open in IMG/M
3300010373\|Ga0134128_10032402	All Organisms → cellular organisms → Archaea	6135	Open in IMG/M
3300010373\|Ga0134128_12175613	Not Available	611	Open in IMG/M
3300010396\|Ga0134126_10212620	Not Available	2307	Open in IMG/M
3300010399\|Ga0134127_10445834	All Organisms → cellular organisms → Archaea	1292	Open in IMG/M
3300010400\|Ga0134122_10331121	All Organisms → cellular organisms → Archaea	1319	Open in IMG/M
3300012201\|Ga0137365_10144419	All Organisms → cellular organisms → Archaea	1788	Open in IMG/M
3300012212\|Ga0150985_116888595	Not Available	505	Open in IMG/M
3300012285\|Ga0137370_11051255	Not Available	500	Open in IMG/M
3300012490\|Ga0157322_1026831	All Organisms → cellular organisms → Archaea	591	Open in IMG/M
3300012496\|Ga0157353_1038568	Not Available	540	Open in IMG/M
3300012501\|Ga0157351_1041188	Not Available	577	Open in IMG/M
3300012502\|Ga0157347_1021975	Not Available	752	Open in IMG/M
3300012882\|Ga0157304_1053341	Not Available	629	Open in IMG/M
3300012884\|Ga0157300_1004482	Not Available	1487	Open in IMG/M
3300012893\|Ga0157284_10056038	Not Available	915	Open in IMG/M
3300012896\|Ga0157303_10017278	All Organisms → cellular organisms → Archaea	1176	Open in IMG/M
3300012896\|Ga0157303_10168587	Not Available	604	Open in IMG/M
3300012897\|Ga0157285_10007132	All Organisms → cellular organisms → Archaea	2091	Open in IMG/M
3300012897\|Ga0157285_10165438	Not Available	669	Open in IMG/M
3300012898\|Ga0157293_10079870	Not Available	800	Open in IMG/M
3300012899\|Ga0157299_10337575	Not Available	512	Open in IMG/M
3300012903\|Ga0157289_10330112	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	550	Open in IMG/M
3300012905\|Ga0157296_10305164	Not Available	559	Open in IMG/M
3300012908\|Ga0157286_10042803	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1125	Open in IMG/M
3300012911\|Ga0157301_10405131	All Organisms → cellular organisms → Archaea	529	Open in IMG/M
3300012913\|Ga0157298_10335168	Not Available	551	Open in IMG/M
3300012915\|Ga0157302_10022783	All Organisms → cellular organisms → Archaea	1592	Open in IMG/M
3300012951\|Ga0164300_10045140	Not Available	1711	Open in IMG/M
3300012955\|Ga0164298_10020536	All Organisms → cellular organisms → Archaea	2806	Open in IMG/M
3300012955\|Ga0164298_10348918	All Organisms → cellular organisms → Archaea	936	Open in IMG/M
3300012985\|Ga0164308_10421675	Not Available	1097	Open in IMG/M
3300012988\|Ga0164306_10189088	All Organisms → cellular organisms → Archaea	1436	Open in IMG/M
3300012989\|Ga0164305_10015227	All Organisms → cellular organisms → Archaea	3858	Open in IMG/M
3300013096\|Ga0157307_1004121	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2091	Open in IMG/M
3300013096\|Ga0157307_1010418	All Organisms → cellular organisms → Archaea	1430	Open in IMG/M
3300013102\|Ga0157371_10331982	All Organisms → cellular organisms → Archaea	1105	Open in IMG/M
3300014497\|Ga0182008_10042165	All Organisms → cellular organisms → Archaea	2274	Open in IMG/M
3300014497\|Ga0182008_10084250	Not Available	1566	Open in IMG/M
3300014969\|Ga0157376_10188422	All Organisms → cellular organisms → Archaea	1890	Open in IMG/M
3300015077\|Ga0173483_10030627	All Organisms → cellular organisms → Archaea	1959	Open in IMG/M
3300015077\|Ga0173483_10045114	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	1665	Open in IMG/M
3300015077\|Ga0173483_10247394	All Organisms → cellular organisms → Archaea	847	Open in IMG/M
3300015077\|Ga0173483_11004746	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	500	Open in IMG/M
3300015200\|Ga0173480_10793360	Not Available	604	Open in IMG/M
3300015373\|Ga0132257_100174954	All Organisms → cellular organisms → Archaea	2530	Open in IMG/M
3300019356\|Ga0173481_10005504	Not Available	3384	Open in IMG/M
3300019356\|Ga0173481_10062784	All Organisms → cellular organisms → Archaea	1318	Open in IMG/M
3300019356\|Ga0173481_10383160	Not Available	682	Open in IMG/M
3300019361\|Ga0173482_10209029	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	805	Open in IMG/M
3300019362\|Ga0173479_10794441	Not Available	523	Open in IMG/M
3300020070\|Ga0206356_11759976	Not Available	633	Open in IMG/M
3300020075\|Ga0206349_1674207	All Organisms → cellular organisms → Archaea	790	Open in IMG/M
3300020078\|Ga0206352_10763614	All Organisms → cellular organisms → Archaea	750	Open in IMG/M
3300022883\|Ga0247786_1081925	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. AFS	683	Open in IMG/M
3300022883\|Ga0247786_1152333	Not Available	521	Open in IMG/M
3300022892\|Ga0247753_1053749	Not Available	523	Open in IMG/M
3300023071\|Ga0247752_1022461	Not Available	904	Open in IMG/M
3300024055\|Ga0247794_10015448	All Organisms → cellular organisms → Archaea	1834	Open in IMG/M
3300025885\|Ga0207653_10308472	Not Available	614	Open in IMG/M
3300025898\|Ga0207692_10254740	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1053	Open in IMG/M
3300025898\|Ga0207692_11072262	Not Available	533	Open in IMG/M
3300025910\|Ga0207684_10867954	All Organisms → cellular organisms → Archaea	760	Open in IMG/M
3300025914\|Ga0207671_10425372	All Organisms → cellular organisms → Archaea	1057	Open in IMG/M
3300025940\|Ga0207691_11704865	Not Available	510	Open in IMG/M
3300025993\|Ga0208415_1030979	All Organisms → cellular organisms → Archaea → TACK group	527	Open in IMG/M
3300026078\|Ga0207702_11241365	Not Available	739	Open in IMG/M
3300026142\|Ga0207698_10842478	All Organisms → cellular organisms → Archaea	921	Open in IMG/M
3300026295\|Ga0209234_1181752	Not Available	733	Open in IMG/M
3300027909\|Ga0209382_10140111	Not Available	2809	Open in IMG/M
3300030496\|Ga0268240_10125415	All Organisms → cellular organisms → Archaea	618	Open in IMG/M
3300031939\|Ga0308174_10095769	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	2118	Open in IMG/M
3300031939\|Ga0308174_10754487	Not Available	815	Open in IMG/M
3300031996\|Ga0308176_10498025	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1236	Open in IMG/M
3300031996\|Ga0308176_11315679	Not Available	768	Open in IMG/M
3300032074\|Ga0308173_10739044	All Organisms → cellular organisms → Archaea	902	Open in IMG/M
3300034090\|Ga0326723_0363130	Not Available	655	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.36%
Host-Associated	Host-Associated	22.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.36%
Plants	Host-Associated → Plants	21.70%
Human	Host-Associated → Human	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.49%
Peat	Environmental → Terrestrial → Peat	0.94%
Digestive System	Host-Associated → Human → Digestive System	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.09%
Loam	Environmental → Terrestrial → Soil → Loam	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.94%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.66%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.94%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.94%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	31.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.66%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.94%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001989	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09019832	2228664021	Soil	LPRINCRIIPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEIE
ARcpr5oldR_0201172	3300000041	Arabidopsis Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDVVFQCPNCQTFNEIE*
ICChiseqgaiiFebDRAFT_102005491	3300000363	Soil	MPRINCRIIPEPQEATRPIYKKNNGNKIEPFIIGTGDIDYICGRCNNIIAQNVSQSQIASDAVFQ
JGI11615J12901_107015971	3300000953	Soil	LPRINCRIIPEPQEGTRPIYKKNDSKIEPFIVGTGDIDYICGRCDNIIAQNISQSQIASDAVFQCPNCQAF
JGI11615J12901_115392172	3300000953	Soil	MPRINCRIIPEPQEATRPIYKKNNGNKIEPFIIGTGDIDYICGRCNNIIAQNVSQSQIASDAV
JGI24739J22299_100443691	3300001989	Corn Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPXCQTFNXXE*
C688J35102_1206289601	3300002568	Soil	LARVNCRVIPEPQEGTRPIYRKDSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADAVFQCPNCQSFNEVE*
Ga0062593_1002976561	3300004114	Soil	VRINCRIIPEPQEDTRSIYKKNERKIEPLIVGEGDLDYICGRCDNVIAQSVARSQIASDAEFQCPYRQTFSEIE*
Ga0062593_1005851323	3300004114	Soil	MPRVNCRIIPEPQEATRPIYKKKNNGSEIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPN
Ga0062593_1007096983	3300004114	Soil	MPRINCRIIPEPQEATRPIYKKNNGSKIEPFIVGTGDIDYIYGRCDNIIAQNVSQSQIASDAVFQCPN
Ga0063356_1056491552	3300004463	Arabidopsis Thaliana Rhizosphere	LPRINCRTIPEPQEGTRPVYKKNGSKIEPFIVGKGDIDYICGRCDNIIAQNVSQSQIASDAV
Ga0062592_1008396611	3300004480	Soil	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0058860_118465092	3300004801	Host-Associated	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQC
Ga0066675_108892911	3300005187	Soil	MPRINCRTMPEPQEGTRPIYKKNGSKIEPFIVGKGDIDYICSRCDNIIAQNVSQSQIASDAVYQCPNCQAFNEIE*
Ga0070691_100990211	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCP
Ga0070674_1020048321	3300005356	Miscanthus Rhizosphere	LVRINCRIILEPQEGTRSVYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0070709_101604924	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LARVNCRVTPEPQEGTRPIYRKDGSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADAVFQCPNCQSFNEVE*
Ga0070710_107439832	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LARVNCRVTPEPQEVTRPIYRKYSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADTVFQCPNCQSFNEVE*
Ga0070711_1007351001	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LARVNCRVTPEPQEVTRPIYRKYSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADTVF
Ga0070685_110989171	3300005466	Switchgrass Rhizosphere	LVRINCRIITEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0070684_1009703621	3300005535	Corn Rhizosphere	VRINCRIIPEPQEDTRSIYKKNERKIEPLIVGEGDLDYICGRCDNVIAQSVARSQIASDAEFQCPYRQTFNEIE*
Ga0066670_107137601	3300005560	Soil	INCRITPEPQEGTRPRYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0068858_1011903301	3300005842	Switchgrass Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPSCQTFNGVE*
Ga0066652_1014309351	3300006046	Soil	LPRINCRITPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0075421_1001123953	3300006845	Populus Rhizosphere	VLKVKRRKEEMPRINCRIIPEPQEATRPIYKKKKKNNGSQIEPFIVGTGDIDYICGRCDNIIAQNISQSQIASDAVFQCPNCQAFNEVE*
Ga0075425_1006885122	3300006854	Populus Rhizosphere	LPRINCRIISEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQITSDAVFQCPNCQAFNEVE*
Ga0075434_1012037311	3300006871	Populus Rhizosphere	LVRINCRIIPEPQEDTRPVYKKNERKIEPFMVGEGDLDYICGRCDNIIAQSVSRSQIASDAVFQCPNCQTFNE
Ga0075426_110104721	3300006903	Populus Rhizosphere	RIISEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQITSDAVFQCPNCQAFNEVE*
Ga0075436_1010195601	3300006914	Populus Rhizosphere	INCRIILEPQEGTRPIYKKNERKIEPFIVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPSCQTFNGVE*
Ga0126315_101309892	3300010038	Serpentine Soil	LPRINCRIIPEPQEGTRFIHKKNGSKIEPFIVGKGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0134128_100324022	3300010373	Terrestrial Soil	MMKVKRRKEEMPRINCRIIPEPQEATRPIYKKKDNGSEIKPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDEVE*
Ga0134128_121756131	3300010373	Terrestrial Soil	LARVNCRVTPEPQEGTRPIYRKDGSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADTVFQCPNCQSFNEVE*
Ga0134126_102126205	3300010396	Terrestrial Soil	LKVGGRKLARVNCRVTPEPQEGTRPIYRKDGSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADAVFQCPNCQSFNEVE*
Ga0134127_104458343	3300010399	Terrestrial Soil	RIITEPQEGTRPIYKKNERKIESSMVGEGDVENNCGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0134122_103311211	3300010400	Terrestrial Soil	INCRIILEPQEGTRPIYKKNERIIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0137365_101444193	3300012201	Vadose Zone Soil	LPRINCRVIPEPQEKTRPVYKKNGSKIEPFIVGRGDIDYICGMCNNIIAQNVSQSQVASDAVFQCPNCQAFNEVE*
Ga0150985_1168885951	3300012212	Avena Fatua Rhizosphere	LKVGGRKLARVNCRVIPEPQEGTRPIYRKDSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADAVFQCPNCQSFNEVE*
Ga0137370_110512551	3300012285	Vadose Zone Soil	LPRINCRITPEPQEGTRPIYKKNGSKIEPFLVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0157322_10268312	3300012490	Arabidopsis Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFIVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNGVE*
Ga0157353_10385682	3300012496	Unplanted Soil	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0157351_10411881	3300012501	Unplanted Soil	LVRINCRIILEPQEGTRPIYKKNERKIEPFIVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0157347_10219751	3300012502	Arabidopsis Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIAQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0157304_10533412	3300012882	Soil	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQTFNEVE*
Ga0157300_10044822	3300012884	Soil	VLKVKRRKEEMPRINCRIIPEPQEATRPIYKKNNGSKIEPFIVGTGDIDYIYGRCDNIIAQNVSQSQIASDAVFQCPNCQTFNEVE*
Ga0157284_100560381	3300012893	Soil	LVIINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0157303_100172784	3300012896	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTF
Ga0157303_101685871	3300012896	Soil	LPRINCRITPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEIE*
Ga0157285_100071322	3300012897	Soil	LPRINCRITPEPQEGTRPVYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNISQSQIASDAVFQCPNCQAFNEVE*
Ga0157285_101654381	3300012897	Soil	MLVRINCKIITEPQEGTRSVYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0157293_100798701	3300012898	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIAQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0157299_103375751	3300012899	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQAFNEVE*
Ga0157289_103301121	3300012903	Soil	NCRITPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0157296_103051641	3300012905	Soil	LPRINCRIIPEPQEGTRPIYKKNESKIEPFIVGTGDIDYICGRCDNIIAQNISQSQIASDAVFQCPNCQAFNEVE*
Ga0157286_100428031	3300012908	Soil	LPRINCRITPEPHEGTRPIYKKNGSKIEPFIVVTGDIDYICRRCDNIIAQNISQSQIASDAVFQCPNCQ
Ga0157301_104051311	3300012911	Soil	QEGTRPVYKKNGSKIEPFIVGTGDIDYICGRCDNIIARNISQSQIASDAVFQCPNCQAFNEVE*
Ga0157298_103351681	3300012913	Soil	LVRINCRIIPVPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNIIAQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0157302_100227833	3300012915	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMIGEGDLDYICGRCDNIIAQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0164300_100451403	3300012951	Soil	LKVGGRKLARVNCRVTPEPQEGTRPIYRKDSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADAVFQCPNCQSFNEVE*
Ga0164298_100205363	3300012955	Soil	LKVGGRKLARVNCRVTPEPQEGTRSIYRKDSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADAVFQCPNCQSFNEVE*
Ga0164298_103489181	3300012955	Soil	CRIITEPQEGTRPIYKKNERKIEPFMVREGDIDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0164308_104216751	3300012985	Soil	RKLARVNCRVTPEPQEGTRPIYRKDSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADAVFQCPNCQSFNEVE*
Ga0164306_101890881	3300012988	Soil	EPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0164305_100152275	3300012989	Soil	QEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE*
Ga0157307_10041211	3300013096	Soil	IPEPQEGTRPVYKKNGSKIEPFIVGKGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEIE*
Ga0157307_10104181	3300013096	Soil	LPRINCRIIPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0157371_103319824	3300013102	Corn Rhizosphere	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMMGEDDLDYICGGCDNVIVQSVSRSQIASDAVFQCPNCQTF
Ga0182008_100421652	3300014497	Rhizosphere	LPRINCRIIPEPQEATRPVYKKNGSKIEPFIVGTGDIDYICGRCNNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0182008_100842502	3300014497	Rhizosphere	LPRINCRITPEPQEATRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNISQSQIASDAVFQCPNCQAFNEVE*
Ga0157376_101884221	3300014969	Miscanthus Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPN
Ga0173483_100306272	3300015077	Soil	LPRINCRITPEPQEGTRPVYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0173483_100451142	3300015077	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIAQSVSRSQIASDAEFQCPYCQTFNEIE*
Ga0173483_102473942	3300015077	Soil	LPRINCRIIPEPQEATRPVYKKKNNGSKIEPFIVGTGDIDYIYGRCDNIIAQNVSQSQIASDAVFQCPNCQTFNEVE*
Ga0173483_110047461	3300015077	Soil	IPEPQEGTRPVYKKNGSKIEPFIVGKGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE*
Ga0173480_107933601	3300015200	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNIIAQSVSRSQIASDAVFQCPNCQTFNEVE*
Ga0132257_1001749541	3300015373	Arabidopsis Rhizosphere	EPQEGTRPIYKKNERKIEPFIVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPSCQTFNGVE*
Ga0173481_100055044	3300019356	Soil	MPRINCRIIPEPQEATRPIYKKNNGSKIEPFIVGTGDIDYIYGRCDNIIAQNVSQSQIASDAVFQCPNCQTFNEVE
Ga0173481_100627842	3300019356	Soil	LPRINCRITPEPQEGTRPVYKKNGSKIKPFIVGTGDIDYICGRCNNIIADAVFQCPNCQAFNEVE
Ga0173481_103831602	3300019356	Soil	LPRINCRITPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE
Ga0173482_102090292	3300019361	Soil	LPRINCRITPEPHEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE
Ga0173479_107944411	3300019362	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEVE
Ga0206356_117599761	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIKSGAVFQCPNCQTFNGVE
Ga0206349_16742072	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE
Ga0206352_107636141	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VRINCRIIPEPQEDTRSIYKKNERKIEPLIVGEGDLDYICGRCDNVIAQSVARSQIASDAEFQCPYRQTFNEIE
Ga0247786_10819252	3300022883	Soil	LPRINCRITPEPQEGTRPVYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE
Ga0247786_11523331	3300022883	Soil	LVRINCRIIPEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIAQSVSRSQIASDAEFQCPYCQTFNEIE
Ga0247753_10537491	3300022892	Soil	INCRITPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE
Ga0247752_10224613	3300023071	Soil	LPRINCRITPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQTFNEVE
Ga0247794_100154483	3300024055	Soil	MLVRINCKIITEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIAQSVSRSQIASDAEFQCPYCQTFNEVE
Ga0207653_103084721	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LVRINCRIITEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE
Ga0207692_102547401	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AERQEKLVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEIE
Ga0207692_110722621	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VKTEQKAKIKRTLNRXCLKVGGRTLARVNCRVTPEPQEVTRPIYRKYSSKIEPFIVGRGDVDYICGKCNNIIAKNVSQGQIAADTVFQCPNCQSFNEVE
Ga0207684_108679541	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFN
Ga0207671_104253721	3300025914	Corn Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQITSGAVFQCPNCQTFNGVEQIVLFTRM
Ga0207691_117048651	3300025940	Miscanthus Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTSMRLNKYFYLPERRR
Ga0208415_10309791	3300025993	Rice Paddy Soil	LVRINCRIIPEPQEDTRPVYKKNERKIEPFMVGEGDLDYICGRCDNIIAQSVSRSQIASDAVFQCPNCQTFNEVE
Ga0207702_112413651	3300026078	Corn Rhizosphere	VRINCRIIPEPQEDTRSIYKKNERKIEPLIVGEGDLDYICGRCDNVIAQSVARSQIASDAEFQCPYRQTFSEIE
Ga0207698_108424782	3300026142	Corn Rhizosphere	LVRINCRIILEPQEGTRPIYKKNERKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPSCQTFNGVE
Ga0209234_11817521	3300026295	Grasslands Soil	PQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE
Ga0209382_101401114	3300027909	Populus Rhizosphere	MPRINCRIIPEPQEATRPIYKKKKKNNGSQIEPFIVGTGDIDYICGRCDNIIAQNISQSQIASDAVFQCPNCQAFNEVE
Ga0268240_101254152	3300030496	Soil	LPRINCRTIPEPQEGTRPIYKKNGSKIEPFIVGKADIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEIE
Ga0308174_100957691	3300031939	Soil	LVRINCRIIPEPQEGTRPIYKKNEGKIEPFMVGEGDLDYICGRCDNVIVQSVSRSQIASDAVFQCPNCQTFNEVE
Ga0308174_107544871	3300031939	Soil	VLKVKRRKLPRINCRITPEPQEGTRPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQAFNEVE
Ga0308176_104980252	3300031996	Soil	LPRINCRIIPEPQEGTRPIYKKNESKIEPFIVGTRDIDYICGRCDNILAQNVSQSQIASDAVFQCPNCQAFNEVE
Ga0308176_113156792	3300031996	Soil	LPRINCRITPEPHEGTTPIYKKNGSKIEPFIVGTGDIDYICGRCDNIIAQNVSQSQIASDAVFQCPNCQ
Ga0308173_107390442	3300032074	Soil	LVRINCRIIPEPQEGTRPIYKKNEGKIEPFMVGEGDLDYICGRCDNVIAQCVSRSQIASDAVFQCPNCQTFNEVE
Ga0326723_0363130_228_455	3300034090	Peat Soil	LPRINCRIIPEPQEGTRPINKKNGSKIEPFIVGTGEIDYICGRCDNIIAHNVSQGQIASDAVFQCPNCQTFNEVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093446

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences