NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093475

Metagenome / Metatranscriptome Family F093475

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093475
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 52 residues
Representative Sequence VRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEQSEEYSFYCTSAAPK
Number of Associated Samples 97
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 91.51 %
% of genes near scaffold ends (potentially truncated) 99.06 %
% of genes from short scaffolds (< 2000 bps) 99.06 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.057 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(11.321 % of family members)
Environment Ontology (ENVO) Unclassified
(25.472 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(30.189 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 32.53%    Coil/Unstructured: 67.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01609DDE_Tnp_1 28.30
PF13808DDE_Tnp_1_assoc 23.58
PF14236DUF4338 17.92
PF02954HTH_8 0.94
PF13358DDE_3 0.94
PF00180Iso_dh 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 28.30
COG3293TransposaseMobilome: prophages, transposons [X] 28.30
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 28.30
COG5421TransposaseMobilome: prophages, transposons [X] 28.30
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 28.30
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 28.30

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.06 %
UnclassifiedrootN/A0.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000311|WSSedA1Ba3DRAFT_1114656All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium515Open in IMG/M
3300001213|JGIcombinedJ13530_101100023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1213Open in IMG/M
3300001245|JGI12048J13642_10007702All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia644Open in IMG/M
3300001245|JGI12048J13642_10007703All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia660Open in IMG/M
3300002910|JGI25615J43890_1058628All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium646Open in IMG/M
3300002961|JGI11641J44799_10166313All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium618Open in IMG/M
3300003369|JGI24140J50213_10154586All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium731Open in IMG/M
3300004000|Ga0055458_10100428All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium797Open in IMG/M
3300004067|Ga0055485_10175424All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium597Open in IMG/M
3300004152|Ga0062386_100513114All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium974Open in IMG/M
3300005458|Ga0070681_11108993All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium712Open in IMG/M
3300005836|Ga0074470_11344315All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1142Open in IMG/M
3300005840|Ga0068870_10363397All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium932Open in IMG/M
3300006102|Ga0075015_100429477All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium750Open in IMG/M
3300006806|Ga0079220_10629793All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium770Open in IMG/M
3300006930|Ga0079303_10221286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium763Open in IMG/M
3300009090|Ga0099827_10581968All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium965Open in IMG/M
3300009131|Ga0115027_10289893All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1095Open in IMG/M
3300009131|Ga0115027_11443658All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium562Open in IMG/M
3300009167|Ga0113563_10734191All Organisms → cellular organisms → Bacteria1111Open in IMG/M
3300009169|Ga0105097_10621814All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium608Open in IMG/M
3300009171|Ga0105101_10340597All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium727Open in IMG/M
3300009509|Ga0123573_10240827All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1769Open in IMG/M
3300009623|Ga0116133_1222461All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium512Open in IMG/M
3300009644|Ga0116121_1029813All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1729Open in IMG/M
3300009764|Ga0116134_1350932All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium506Open in IMG/M
3300009838|Ga0116153_10452162All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M
3300010036|Ga0126305_10895185All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium606Open in IMG/M
3300010341|Ga0074045_10137263All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1669Open in IMG/M
3300010401|Ga0134121_11653610All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium662Open in IMG/M
3300012096|Ga0137389_10691250All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium876Open in IMG/M
3300012096|Ga0137389_10794165All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium813Open in IMG/M
3300012207|Ga0137381_10186809All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1794Open in IMG/M
3300012210|Ga0137378_10208609All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1819Open in IMG/M
3300012527|Ga0136633_1158197All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium871Open in IMG/M
3300012685|Ga0137397_10554936All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300012917|Ga0137395_10119646All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1772Open in IMG/M
3300012971|Ga0126369_12813681All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium569Open in IMG/M
3300013315|Ga0173609_10415058All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium613Open in IMG/M
3300014160|Ga0181517_10084047All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1880Open in IMG/M
3300014306|Ga0075346_1124110All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium580Open in IMG/M
3300014493|Ga0182016_10522651All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300014494|Ga0182017_10132996All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300014494|Ga0182017_10340371All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium934Open in IMG/M
3300014498|Ga0182019_10715155All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium711Open in IMG/M
3300014880|Ga0180082_1042526All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium959Open in IMG/M
3300014883|Ga0180086_1075491All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium836Open in IMG/M
3300015241|Ga0137418_10241158All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1539Open in IMG/M
3300016294|Ga0182041_11713006All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium582Open in IMG/M
3300017935|Ga0187848_10067286All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1685Open in IMG/M
3300017941|Ga0187850_10514378All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium517Open in IMG/M
3300017946|Ga0187879_10507821All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium669Open in IMG/M
3300017975|Ga0187782_11562049All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium521Open in IMG/M
3300018075|Ga0184632_10473513All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium516Open in IMG/M
3300018088|Ga0187771_11226751All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium636Open in IMG/M
3300019788|Ga0182028_1145565All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300020170|Ga0179594_10081380All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1142Open in IMG/M
3300021086|Ga0179596_10575036All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium572Open in IMG/M
3300023311|Ga0256681_11610339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium730Open in IMG/M
3300025852|Ga0209124_10382241Not Available513Open in IMG/M
3300027703|Ga0207862_1212607All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium572Open in IMG/M
3300027775|Ga0209177_10245935All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium658Open in IMG/M
3300027825|Ga0209039_10089020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1338Open in IMG/M
3300027871|Ga0209397_10651513All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300027882|Ga0209590_10325732All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium988Open in IMG/M
3300027890|Ga0209496_10495124All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium648Open in IMG/M
(restricted) 3300027995|Ga0233418_10076559All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium975Open in IMG/M
3300028556|Ga0265337_1132115All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium676Open in IMG/M
3300028785|Ga0302201_10331320All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium601Open in IMG/M
3300028800|Ga0265338_11099691All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium535Open in IMG/M
3300028857|Ga0302289_1103617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium655Open in IMG/M
3300029889|Ga0246001_1088120All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium559Open in IMG/M
3300029957|Ga0265324_10033489All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1792Open in IMG/M
3300029984|Ga0311332_10990269All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium674Open in IMG/M
3300030000|Ga0311337_10346757All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1249Open in IMG/M
3300030048|Ga0302273_1169967All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium638Open in IMG/M
3300030052|Ga0302217_10051598All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium902Open in IMG/M
3300031238|Ga0265332_10459555All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium527Open in IMG/M
3300031240|Ga0265320_10194442All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium906Open in IMG/M
3300031241|Ga0265325_10527180All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium511Open in IMG/M
3300031242|Ga0265329_10130832All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium808Open in IMG/M
3300031344|Ga0265316_10830689All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium647Open in IMG/M
3300031344|Ga0265316_10957864All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium596Open in IMG/M
3300031524|Ga0302320_10002925All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula39908Open in IMG/M
3300031525|Ga0302326_11055731All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1134Open in IMG/M
3300031712|Ga0265342_10520361All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium605Open in IMG/M
3300031726|Ga0302321_101912581All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium688Open in IMG/M
3300032160|Ga0311301_12999322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium508Open in IMG/M
3300032177|Ga0315276_12055415All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium582Open in IMG/M
3300032397|Ga0315287_10897476All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1037Open in IMG/M
3300032782|Ga0335082_10861472All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium768Open in IMG/M
3300032892|Ga0335081_10730309All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1196Open in IMG/M
3300032893|Ga0335069_12324243All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium558Open in IMG/M
3300032897|Ga0335071_10235212All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1786Open in IMG/M
3300032897|Ga0335071_10925425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium819Open in IMG/M
3300032955|Ga0335076_10543421All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1045Open in IMG/M
3300033402|Ga0326728_10251699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1681Open in IMG/M
3300033407|Ga0214472_10884612All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium798Open in IMG/M
3300033486|Ga0316624_11581519All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium604Open in IMG/M
3300033521|Ga0316616_100313426All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1674Open in IMG/M
3300033521|Ga0316616_103405117All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium599Open in IMG/M
3300033521|Ga0316616_104556630All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium521Open in IMG/M
3300033557|Ga0316617_100378224All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1239Open in IMG/M
3300033557|Ga0316617_100752048All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium927Open in IMG/M
3300033977|Ga0314861_0297425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium729Open in IMG/M
3300034090|Ga0326723_0473380All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium573Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil11.32%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.38%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere9.43%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen4.72%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland3.77%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen3.77%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.83%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.83%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.83%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland2.83%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.83%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.89%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.89%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.89%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.89%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.89%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.89%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.94%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.94%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.94%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.94%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.94%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.94%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.94%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.94%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.94%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.94%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.94%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.94%
Deep SubsurfaceEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface0.94%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.94%
PeatEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.94%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge0.94%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment0.94%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000311Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001245Estuarine microbial mat communities from Elkhorn Slough, Moss Landing, CA, USA - CR3B Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300002910Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cmEnvironmentalOpen in IMG/M
3300002961Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300003369Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22AEnvironmentalOpen in IMG/M
3300004000Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2EnvironmentalOpen in IMG/M
3300004067Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006930Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWCEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009644Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009838Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaGEngineeredOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012527Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013315Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1BEngineeredOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014306Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1EnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014880Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10DEnvironmentalOpen in IMG/M
3300014883Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10DEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300023311Combined Assembly of Gp0281739, Gp0281740, Gp0281741EnvironmentalOpen in IMG/M
3300025852Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027825Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027995 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MGEnvironmentalOpen in IMG/M
3300028556Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaGHost-AssociatedOpen in IMG/M
3300028785Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028857Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_2EnvironmentalOpen in IMG/M
3300029889Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cmEnvironmentalOpen in IMG/M
3300029957Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaGHost-AssociatedOpen in IMG/M
3300029984I_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030048Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3EnvironmentalOpen in IMG/M
3300030052Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3EnvironmentalOpen in IMG/M
3300031238Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaGHost-AssociatedOpen in IMG/M
3300031240Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaGHost-AssociatedOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031242Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaGHost-AssociatedOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033977Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
WSSedA1Ba3DRAFT_111465623300000311WetlandLVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAP
JGIcombinedJ13530_10110002313300001213WetlandLVRWRLQRVSLSPEEAGLCGCWQFLAVWRQRQELRQGKVTEQSEE
JGI12048J13642_1000770223300001245EstuarineLTRWRIQRKTVTPEEAGLCGCRQFIAVWRERHYLRRGRVYKEEQEYSFYVSSVDPQRYDE
JGI12048J13642_1000770313300001245EstuarineLTRWRIQRKTVTPEEAGLCGCRQFIAVWRERHYLRRGRVYKEEQEYSFYVSS
JGI25615J43890_105862823300002910Grasslands SoilLVRWRIQRVSLSPEEAGLCGCWQFLAIWRERQELRAGKVVEQSEEY
JGI11641J44799_1016631313300002961WetlandLVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPKQYGA
JGI24140J50213_1015458623300003369Arctic Peat SoilVRWRLQRASVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSEEYSF
Ga0055458_1010042813300004000Natural And Restored WetlandsLVRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSQEYAFYGTSTAPQQYSARQLLQAI
Ga0055485_1017542423300004067Natural And Restored WetlandsLVRWRIQRVTVSPEEAGLCGCWQFLAVWRQRQELRQGKVTEESEEYSFYATSAASE
Ga0062386_10051311423300004152Bog Forest SoilVRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEEYSFYCTSAAPKQYS
Ga0070681_1110899323300005458Corn RhizosphereLERCRLQRVALSPQEAGLCGCWQFIALWRQREELRQGKVIKQEEEYQFYCSSLA
Ga0074470_1134431513300005836Sediment (Intertidal)VRWRLQRFSLSPEEAGLCGCWQFIAVWRERQELRAGKVTEQSEEYAFYCTSAAPKQYSA
Ga0068870_1036339713300005840Miscanthus RhizosphereVRWRLQRVNLSPEEAGLCGCWQFVAVWRERQELRQGKVTEQSAEYSFY
Ga0075015_10042947713300006102WatershedsLVRWRLQRVSVSPEEPGLCGCWQFIAVWRERQELRAGKVTEQSEEYSFYCTSAAPEQYSARQLLQ
Ga0079220_1062979323300006806Agricultural SoilLVRWRIQRVTVSPEEAGLCGCWQFLAVWRERQELRRGK
Ga0079303_1022128613300006930Deep SubsurfaceVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEQSEEYSFYCTSAAPK
Ga0099827_1058196823300009090Vadose Zone SoilLVRWRLQRVSLSPEEAGLCGCWQFVAVWRERKELRQGKVIEESQEYSFYCTSAA
Ga0115027_1028989323300009131WetlandVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEQSEEYSFYCTSAAPKQY
Ga0115027_1144365813300009131WetlandVRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSKEYAFYCTSAAPKQYSA
Ga0113563_1073419113300009167Freshwater WetlandsLERWRLQRVSVTPEQAGLTGCWQFIALWRDRQQLRKGKVLEQSQEYSF
Ga0105097_1062181423300009169Freshwater SedimentVRWRIQRVTVSPEEAGLCGCWQFLALWRERQDLRRGNVVATSEEYAFYCTSAAPTPYSA
Ga0105101_1034059713300009171Freshwater SedimentLVRWRLQRVSLSPEEAGLCGCWQWIAVWRERQELRQGKVTEQSEEYSFYCTSAAPKQYSAPQLLQA
Ga0123573_1024082723300009509Mangrove SedimentVSLSPEEAGLCGCWQFIAVWREQKHLRRGKVIKEFEEYSFYSTSAAPEQYGAAQLLGV
Ga0116133_122246123300009623PeatlandLVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEES
Ga0116121_102981313300009644PeatlandLVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYC
Ga0116134_135093223300009764PeatlandLVRWRLQRVSLSPEEAGLGGCWQWIAVWRERQELR
Ga0116153_1045216213300009838Anaerobic Digestor SludgeLARWRIQRLTVSPEQAGLCGCWQFLAVWRERQELRRGKVIDSSEEYSFYCTSAAPKQYS
Ga0126305_1089518513300010036Serpentine SoilVAVTPENSGLCGCWQFVAVWRERQQLRAGQVTARAQEYSFYCTSLAQQERNPEQ
Ga0074045_1013726313300010341Bog Forest SoilLVRWRLQRVNVSPEEAGLCGCWQFIAVWREQKLLRRGRVVKQFEEYAFYATSAAPEQYSAAQL
Ga0134121_1165361013300010401Terrestrial SoilVRWRVQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVSEQSQEYSFYCTSAAPAQ
Ga0137389_1069125013300012096Vadose Zone SoilLVRWRIQRVSLSPEEAGLCGCWQFLAIWRERQELRAGKVVEQSEEYSF
Ga0137389_1079416523300012096Vadose Zone SoilVRWRVQRVGLSPEEAGLCGCWQFLAVWRERQELRQGKV
Ga0137381_1018680933300012207Vadose Zone SoilLVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTEASEEY
Ga0137378_1020860933300012210Vadose Zone SoilLVRWRIQRASLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYSTSVA
Ga0136633_115819713300012527Polar Desert SandVQRCALSPEDAGLTGCTQFVAVRRERQQLRRGKVVESSSEF
Ga0137397_1055493623300012685Vadose Zone SoilLVRWRLQRVSLSPEEAGLCGCWQFVAVWRERKVLRQGKVNEESEEYSF
Ga0137395_1011964633300012917Vadose Zone SoilLVRWRLQRVSLSPEDAGLCGCWQLMAVWREQKKLRKGKVIEEFEEYSFYCTSAA
Ga0126369_1281368123300012971Tropical Forest SoilMVRWRLQRASLSPEQAGLCGCWQFIAVWRERQELRGSKVIDSSEEYAFYC
Ga0173609_1041505823300013315SedimentLVRWRIQRVTVSPEEAGLCGCWQFLAVWRERQELRRGKVVETSEEYAFYCTSAAPKQYSAHRLL
Ga0181517_1008404723300014160BogLVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPKQYSA
Ga0075346_112411013300014306Natural And Restored WetlandsVDPETAGLTGCWQFIAMWRERQELCDGKVAHESQEYSFYVTSLDEDQATAQELAQH
Ga0182016_1052265123300014493BogLVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKV
Ga0182017_1013299613300014494FenVRWRLQRFSLSPEEAGLCGCWQFLAVWREREELRQGKVT
Ga0182017_1034037123300014494FenMRWRLQRQSLSPEEAGLCGCWQFIAVWRQRQELRAGKVVESSEEYAFYCTSAAP
Ga0182019_1071515523300014498FenLQRVSLSPEAAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPKQ*
Ga0180082_104252623300014880SoilVTLSPEEAGLCGCWQFIAVWRQREQLRQGKVTETE
Ga0180086_107549113300014883SoilLVRWRLQRVSVSPEEAGLCGCWQFVAVWREQKELRRGKIIKESEEYSFYCTSAAPAQYS
Ga0137418_1024115813300015241Vadose Zone SoilLERCRLQRIEIDPENAGLCGCWQFIAVWRERQKLRKGQVVETS
Ga0182041_1171300613300016294SoilLVRWRIQRVTVSPQEAGLCGCWQLLAVWRERQELRQGKVVETSEDYAFY
Ga0187848_1006728633300017935PeatlandLVRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRKGKVIEQSEEYAFYCT
Ga0187850_1051437823300017941PeatlandVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSAAPK
Ga0187879_1050782123300017946PeatlandVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTS
Ga0187782_1156204923300017975Tropical PeatlandVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSEEYAFYCTSAAPGQYSAR
Ga0184632_1047351323300018075Groundwater SedimentLVRWRLQRVGLSPEEAGLCGCWQFVAVWRERKELRQGKVIEESE
Ga0187771_1122675113300018088Tropical PeatlandVRWRLPRVSLSPEEAGLCGCWQFIAVWRERQELRQGKVTEQSEEYSFYCTSAAPQQ
Ga0182028_114556513300019788FenVRWRLQRFSLSPEEAGLCGCWQFLAVWREREELRRGKVTEKSEEYRSPK
Ga0179594_1008138023300020170Vadose Zone SoilVRWRIQSVSLSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSQEYSFYCTSAAPK
Ga0179596_1057503623300021086Vadose Zone SoilVRWRIQRVSLSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSQEYSFYCTSA
Ga0256681_1161033923300023311FreshwaterVRWRLQRTTLSPEAAGLCGCWQFIAVWRQRQELRQGKVTAESEEYSYYCTSAAPEQYDAP
Ga0209124_1038224123300025852Arctic Peat SoilVRWRIQRVNLSPEEAGLCGCWQFLAVWRERQELRQGKVTKESQEYSYYCTSAAPD
Ga0207862_121260723300027703Tropical Forest SoilLVRWRIQRFSVSPEEAGLCGCWQFLAVWRDRQQLRAGKVTEQSEEYSFYCTSAAPEQYRA
Ga0209177_1024593513300027775Agricultural SoilHGRLERCRLQRVALSPQEAGLCGCWQFIALWRQREELRQGKVIKQEEEY
Ga0209039_1008902023300027825Bog Forest SoilVRWRIQRVSLSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEEYSFYCTSAAPKQYS
Ga0209397_1065151313300027871WetlandLERWRLQRVSVTPEQAGLTGCWQFIALWRDRHQLRKGKVLEQSQEYSFYVT
Ga0209590_1032573223300027882Vadose Zone SoilVRWRLQRVSLSPEEAGLCGCWQFVAVWRERKELRQGKVIEESQEYSFYCTSAAKDQ
Ga0209496_1049512423300027890WetlandVRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSQEYAF
(restricted) Ga0233418_1007655913300027995SedimentVRWRLQRFSLSPEEAGLCGCWQFIAVWRERQELRHGKVTEQSQEYSFYATSAAP
Ga0265337_113211513300028556RhizosphereLVRWRIQRVSLSPEEAGLCGCWQFLAVWRERQELRKGKVVQQSEEYAFYCTSAA
Ga0302201_1033132013300028785BogVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEESEEYSFYCTSAACGQYS
Ga0265338_1109969113300028800RhizosphereVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVREESEEYSFYCTSA
Ga0302289_110361723300028857FenLVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTEQSEEYSFYCTSAAPE
Ga0246001_108812013300029889PeatLVRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRKGKVIEQSEEYAFYCTSAAPKQY
Ga0265324_1003348923300029957RhizosphereVRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVV
Ga0311332_1099026913300029984FenLVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTQQSEEYSFYCTSAAPEQYS
Ga0311337_1034675723300030000FenVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESE
Ga0302273_116996723300030048BogLVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTQQSEEYSFYCTSAAPEQ
Ga0302217_1005159823300030052FenLVRWRLQRVSVSPEEAGLCGCWQFIAVWRERQELRAGKVTQQSEEYSFYCTSAAPEQY
Ga0265332_1045955523300031238RhizosphereVRWRLQRVSLSPEEAGLCGCWQFIAVWRERKELRQGKVTEESEEYSFYCTSA
Ga0265320_1019444223300031240RhizosphereVRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEE
Ga0265325_1052718013300031241RhizosphereVRWRLQRVSLSPEEAGLCGCWQLLAVWRERQELRQGKVVEESEEYSFYCTSAAPEQYSAQQLLG
Ga0265329_1013083223300031242RhizosphereVRWRLQRISLSPEEAGLCGCWQFLAVWRERQELRAGKVIGFSEEYAFYCTSAAPKQYSAR
Ga0265316_1083068913300031344RhizosphereVRWRIQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVVEQSEEYSFYCTSAA
Ga0265316_1095786413300031344RhizosphereVRWRLQRTTLSPEAAGLCGCWQFIAVWRQRQELRQGKVTAESEEY
Ga0302320_1000292513300031524BogMRDWKRNIISPEESGLCGCWQFLAVWRERQELRQGKVTEQS
Ga0302326_1105573123300031525PalsaLVRWRLQRVSLSPEEAGLCGCWQLIAVWRERKELR
Ga0265342_1052036123300031712RhizosphereVRWRIQTKGVTPEEAGLCGCWQFVAVWRERQELRQGKVIDQSQEYSFYATSAAPGQYSA
Ga0302321_10191258123300031726FenLVRWRIQRVTVSPEEAGLCGCWQFLAVWRERQELRRGKVVQTSEEYAFYCTSAAPK
Ga0311301_1299932213300032160Peatlands SoilLVRWRIQRVSRSPEEAGLCGCWQFLAVWRERQDLRQGKVTEQSEEYSFYVTSAAPKQYTA
Ga0315276_1205541523300032177SedimentLVRWRIQTKGVTPEEAGLCGCWQFVAVWRERQELRQGKVIDESEEYSFYATSAAPGQ
Ga0315287_1089747613300032397SedimentVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVTE
Ga0335082_1086147223300032782SoilVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEESEEYSFYCTSAACGQYSAQQWL
Ga0335081_1073030913300032892SoilVRWRLQRVSVSPEEVGLCGCWQFIAVWREQKKLRQGKVVEECEEYSFYATSAAPKQY
Ga0335069_1232424323300032893SoilVRWRLQRVSLSPEDAGLCGCWQFVAVWRERQELRAGKVTEQSQEYA
Ga0335071_1023521233300032897SoilVRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRAGKVTEQSQEYAFYCTSAAPDQYSARQLLQAI
Ga0335071_1092542523300032897SoilVRWRLQRVSLSPEEAGLCGCWQFIAVWRERQELRQGKVTEQSEE
Ga0335076_1054342113300032955SoilLVRWRIQRASVSPEEAGLCGCWQFLAVWRQRQELRQGKVTEES
Ga0326728_1025169933300033402Peat SoilLVRWRLQRVSLSPEEAGLCGCWQFLAVWRERQELRQGKVIEESEEYSFYCTSLAPGQYTAQQLLGK
Ga0214472_1088461223300033407SoilMRWRIQRVTVSPEDAGLCGCWQFIAVWREQKKLRKGKVIEEHDEYSFYCTS
Ga0316624_1158151923300033486SoilLVRWRIQRASLSPEAAGLCGCWQFLAVWRERQELRAGKVIEPSEEYSFYCTSAAPKQYSARQ
Ga0316616_10031342623300033521SoilVRWRLQRVSVSPEEAGLCGCWQFLAVWRERQELRAGKVTEQSQEYAFYGTSTAPQ
Ga0316616_10340511723300033521SoilVRWRLQRVSLSPEAAGLCGCWQFLAVWRERQELRQGKVTEE
Ga0316616_10455663013300033521SoilLVRWRIQRVTVSPQEAGLCGCWQFLAVWRERQELRQGKVVET
Ga0316617_10037822413300033557SoilLVRWRIQRVTVSPQEAGLCGCWQFLAVWRERQELRQGKVTEESEEYSFYCTSAAPGQYSA
Ga0316617_10075204823300033557SoilLVRWRIQRVTVSPEAAGLCGCWQFLAVWRQRQELRRGKVVET
Ga0314861_0297425_1_1533300033977PeatlandMRWRIQRVSVSPEEAGLCGCWQFIAVWREQKRLRQGKVVEEFEEYSFYATS
Ga0326723_0473380_3_1583300034090Peat SoilMRWRLQRVSLSPEEAGLCGCWQFIALWRERKELRQGKVTEESEEYSFYCTSA

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Bioinformatics & Integrated Biology Lab
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