Metagenome / Metatranscriptome Family F093476

Basic Information
Family ID	F093476
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	121 residues
Representative Sequence	MLRNLKAGIALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTESSTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRIGPGHN
Number of Associated Samples	81
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	60.38 %
% of genes near scaffold ends (potentially truncated)	46.23 %
% of genes from short scaffolds (< 2000 bps)	96.23 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (75.472 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.755 % of family members)
Environment Ontology (ENVO)	Unclassified (23.585 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.509 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 10.48% β-sheet: 21.77% Coil/Unstructured: 67.74%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF01904	DUF72	7.55
PF08327	AHSA1	4.72
PF10503	Esterase_PHB	3.77
PF05235	CHAD	3.77
PF00583	Acetyltransf_1	1.89
PF04366	Ysc84	0.94
PF07045	DUF1330	0.94
PF05598	DUF772	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	7.55
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	3.77
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	3.77
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.94
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
All Organisms	root	All Organisms	24.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
cellular organisms	root	All Organisms → cellular organisms	24.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.47 %
Streptomyces sp. PsTaAH-130	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PsTaAH-130	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459007\|GJ8XV2H01AL83Q	Not Available	514	Open in IMG/M
2170459010\|GIO7OMY01APDYY	Not Available	531	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101845868	Not Available	599	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101845986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101846629	All Organisms → cellular organisms → Bacteria → Proteobacteria	1852	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105671020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1610	Open in IMG/M
3300005293\|Ga0065715_10630688	Not Available	690	Open in IMG/M
3300005332\|Ga0066388_101857248	Not Available	1074	Open in IMG/M
3300005332\|Ga0066388_102117964	Not Available	1012	Open in IMG/M
3300005344\|Ga0070661_101687842	Not Available	536	Open in IMG/M
3300005436\|Ga0070713_100226695	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300005439\|Ga0070711_100150160	All Organisms → cellular organisms → Bacteria	1756	Open in IMG/M
3300005439\|Ga0070711_100470007	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300005458\|Ga0070681_10501627	All Organisms → cellular organisms → Bacteria → Proteobacteria	1127	Open in IMG/M
3300005458\|Ga0070681_11697400	Not Available	558	Open in IMG/M
3300005471\|Ga0070698_100426505	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300005530\|Ga0070679_101042367	Not Available	762	Open in IMG/M
3300005535\|Ga0070684_102278805	Not Available	511	Open in IMG/M
3300005536\|Ga0070697_101288099	Not Available	652	Open in IMG/M
3300005539\|Ga0068853_100372765	Not Available	1332	Open in IMG/M
3300005539\|Ga0068853_100720512	Not Available	952	Open in IMG/M
3300005548\|Ga0070665_101322517	Not Available	730	Open in IMG/M
3300005764\|Ga0066903_101793589	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300005764\|Ga0066903_102631364	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005841\|Ga0068863_102192520	Not Available	562	Open in IMG/M
3300005937\|Ga0081455_11038059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PsTaAH-130	507	Open in IMG/M
3300006806\|Ga0079220_10615784	Not Available	776	Open in IMG/M
3300009101\|Ga0105247_10854372	Not Available	699	Open in IMG/M
3300009545\|Ga0105237_10556316	Not Available	1154	Open in IMG/M
3300009545\|Ga0105237_11760414	Not Available	627	Open in IMG/M
3300009551\|Ga0105238_10265234	Not Available	1697	Open in IMG/M
3300010043\|Ga0126380_10950844	Not Available	719	Open in IMG/M
3300010043\|Ga0126380_10974239	Not Available	712	Open in IMG/M
3300010048\|Ga0126373_10366509	All Organisms → cellular organisms → Bacteria → Proteobacteria	1457	Open in IMG/M
3300010048\|Ga0126373_12847992	Not Available	540	Open in IMG/M
3300010359\|Ga0126376_12909537	Not Available	528	Open in IMG/M
3300010360\|Ga0126372_11064275	Not Available	825	Open in IMG/M
3300010361\|Ga0126378_10001926	All Organisms → cellular organisms → Bacteria → Proteobacteria	15376	Open in IMG/M
3300010361\|Ga0126378_12251360	Not Available	622	Open in IMG/M
3300010362\|Ga0126377_12427311	Not Available	600	Open in IMG/M
3300010375\|Ga0105239_11205829	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300010376\|Ga0126381_101000027	Not Available	1206	Open in IMG/M
3300010376\|Ga0126381_101676967	Not Available	918	Open in IMG/M
3300010396\|Ga0134126_11292043	Not Available	808	Open in IMG/M
3300010397\|Ga0134124_10308932	Not Available	1476	Open in IMG/M
3300010397\|Ga0134124_13002105	Not Available	516	Open in IMG/M
3300012971\|Ga0126369_12341061	Not Available	620	Open in IMG/M
3300012984\|Ga0164309_11244604	Not Available	627	Open in IMG/M
3300012984\|Ga0164309_11677841	Not Available	545	Open in IMG/M
3300012987\|Ga0164307_11794553	Not Available	520	Open in IMG/M
3300012988\|Ga0164306_11303004	Not Available	614	Open in IMG/M
3300013105\|Ga0157369_10926799	Not Available	893	Open in IMG/M
3300014325\|Ga0163163_10204536	Not Available	2023	Open in IMG/M
3300014968\|Ga0157379_11655382	Not Available	626	Open in IMG/M
3300015371\|Ga0132258_11020388	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300015373\|Ga0132257_102734838	Not Available	643	Open in IMG/M
3300015374\|Ga0132255_104469528	Not Available	593	Open in IMG/M
3300016371\|Ga0182034_11691095	Not Available	557	Open in IMG/M
3300016387\|Ga0182040_11451523	Not Available	582	Open in IMG/M
3300016422\|Ga0182039_11655716	Not Available	585	Open in IMG/M
3300016445\|Ga0182038_10710345	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300021168\|Ga0210406_10650321	Not Available	818	Open in IMG/M
3300021168\|Ga0210406_11178588	Not Available	559	Open in IMG/M
3300021475\|Ga0210392_10038622	All Organisms → cellular organisms → Bacteria	2865	Open in IMG/M
3300021560\|Ga0126371_10438832	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300021560\|Ga0126371_11927735	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300021560\|Ga0126371_13504325	Not Available	530	Open in IMG/M
3300025900\|Ga0207710_10641340	Not Available	556	Open in IMG/M
3300025912\|Ga0207707_11395969	Not Available	559	Open in IMG/M
3300025914\|Ga0207671_11095754	Not Available	626	Open in IMG/M
3300025920\|Ga0207649_11266900	Not Available	583	Open in IMG/M
3300025921\|Ga0207652_10686707	Not Available	914	Open in IMG/M
3300025924\|Ga0207694_10781357	Not Available	806	Open in IMG/M
3300025928\|Ga0207700_10252276	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300026041\|Ga0207639_11981998	Not Available	543	Open in IMG/M
3300026041\|Ga0207639_12204366	Not Available	512	Open in IMG/M
3300026088\|Ga0207641_10855322	Not Available	902	Open in IMG/M
3300029636\|Ga0222749_10456446	Not Available	685	Open in IMG/M
3300031057\|Ga0170834_105077219	Not Available	540	Open in IMG/M
3300031128\|Ga0170823_11899619	Not Available	682	Open in IMG/M
3300031231\|Ga0170824_108555176	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031231\|Ga0170824_120280926	Not Available	662	Open in IMG/M
3300031446\|Ga0170820_13321426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1243	Open in IMG/M
3300031544\|Ga0318534_10378504	Not Available	814	Open in IMG/M
3300031549\|Ga0318571_10106966	Not Available	923	Open in IMG/M
3300031668\|Ga0318542_10379539	Not Available	729	Open in IMG/M
3300031682\|Ga0318560_10786506	Not Available	514	Open in IMG/M
3300031747\|Ga0318502_10462674	Not Available	758	Open in IMG/M
3300031747\|Ga0318502_10584634	Not Available	672	Open in IMG/M
3300031769\|Ga0318526_10463025	Not Available	518	Open in IMG/M
3300031782\|Ga0318552_10632469	Not Available	546	Open in IMG/M
3300031831\|Ga0318564_10189387	Not Available	917	Open in IMG/M
3300031880\|Ga0318544_10189374	Not Available	793	Open in IMG/M
3300031897\|Ga0318520_10609738	Not Available	679	Open in IMG/M
3300031910\|Ga0306923_11591572	Not Available	679	Open in IMG/M
3300031954\|Ga0306926_12199269	Not Available	614	Open in IMG/M
3300032001\|Ga0306922_11459156	Not Available	686	Open in IMG/M
3300032008\|Ga0318562_10266121	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300032008\|Ga0318562_10284083	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300032008\|Ga0318562_10339355	Not Available	873	Open in IMG/M
3300032009\|Ga0318563_10444931	Not Available	701	Open in IMG/M
3300032009\|Ga0318563_10597508	Not Available	595	Open in IMG/M
3300032055\|Ga0318575_10509262	Not Available	611	Open in IMG/M
3300032067\|Ga0318524_10071080	All Organisms → cellular organisms → Bacteria	1691	Open in IMG/M
3300032205\|Ga0307472_101121607	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300032205\|Ga0307472_101392443	Not Available	680	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.42%
Host-Associated	Host-Associated	23.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.42%
Plants	Host-Associated → Plants	23.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.38%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.32%
Loam	Environmental → Terrestrial → Soil → Loam	15.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.83%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L02_05273040	2170459007	Grass Soil	MKARMALVLAVTLAPAGFSTQGLIEKDAMANATYRPGMMAPHSTRAYTSGGELRVCNDGPVPVRLYISNSLSNGSTDSVLAPGRCNQNWGHMMTVVNESIVPVNV
F62_05700650	2170459010	Grass Soil	MLRNLKAGIVLAVAFAVVPVGVSTCGLIEKNALAIATYRPGDMKPHSTRVYTAGGELRVCNEGPVPVRLFISNSLSNAPTDSLLEPGRCNQNWGHMMTVRNDADVPAGVWAYGSLGGRVGPGHTHPGK
INPhiseqgaiiFebDRAFT_1018458681	3300000364	Soil	MLRNLKAGIALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTXSXTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRIGPGHNHPSK*
INPhiseqgaiiFebDRAFT_1018459861	3300000364	Soil	MLRNLKAGIALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTESSTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRIGPGHN
INPhiseqgaiiFebDRAFT_1018466293	3300000364	Soil	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTESSTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRIGPGHNHPSK*
INPhiseqgaiiFebDRAFT_1056710202	3300000364	Soil	MLRTMKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNXGPVTVRLYIXNSLTNSSTDSLLEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGPGGHH*
Ga0065715_106306881	3300005293	Miscanthus Rhizosphere	MLRTMKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNSSTDSLLEPGRCNQSWGHMMTVVNESNVPANVWAY
Ga0066388_1018572482	3300005332	Tropical Forest Soil	MLRSLKSGLVLAVALSMVPVAFTASGLVGSTASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLTNEPTMSMLEPGRCNQNWGHMMTVENFSDVPANVWAFGSLGGRIGTGGHH*
Ga0066388_1021179641	3300005332	Tropical Forest Soil	MLRSLKPALVLALAIASLPVGISTSGLVDNTASAVATYRPGAMRPHSTRSYTAAGELRVCNEGPVPVTLYISNSLSTQSSMSRLEPGRCNQNWGHMMSVVNDSDVPANVWAYGSLGGRIGPGHTHH*
Ga0070661_1016878421	3300005344	Corn Rhizosphere	MLRKSNLAIALALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMMTVVNDSNVPAAVWAYGSLGGRI
Ga0070713_1002266952	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLRTMKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNSSTDSLLEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGPGGHH*
Ga0070711_1001501602	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRVGPGHNHPSK*
Ga0070711_1004700072	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLRTMKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNSSTDSLLEPGRCNQSWGHIMTVVNDSNVPADVWAYGSLGGRAGQGPGHK*
Ga0070681_105016271	3300005458	Corn Rhizosphere	SNLAIALALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMMTVVNDSDVPAAVWAYGSLGGRIGPGHTHP*
Ga0070681_116974001	3300005458	Corn Rhizosphere	LKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGAAGGHK*
Ga0070698_1004265051	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMMTVVNDSNV
Ga0070679_1010423672	3300005530	Corn Rhizosphere	GLSLHGLTASDASAGATFRPGNMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGSSTNSLLEPGRCNQSWGHMMTVVNDSNVPAAVWAYGSLGGRIGPGHTHP*
Ga0070684_1022788052	3300005535	Corn Rhizosphere	GSMLRTMKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGSASGHK*
Ga0070697_1012880991	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RTMNARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNSSTDSLLEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGPGGHH*
Ga0068853_1003727651	3300005539	Corn Rhizosphere	MLRKSNLAIALALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMRTVVNDSDVPAAVWAYGSLGGRIGPGHTHP*
Ga0068853_1007205122	3300005539	Corn Rhizosphere	MLRTMKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGSASGHK
Ga0070665_1013225171	3300005548	Switchgrass Rhizosphere	TMKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGSASGHK*
Ga0066903_1017935892	3300005764	Tropical Forest Soil	MLRSLKPALILALAIASLPVGISTSGLVDNTASAVATYRPGAMRPHSTRNYSAAGELRVCNEGPVPVTLYISNSLSTQSSMSRLEPGRCNQNWGHMMSVVNDSDVPANVWAYGSLGGRIGPGHTHP*
Ga0066903_1026313643	3300005764	Tropical Forest Soil	VGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLYTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENKVPAGIWAYGGMGGRPGRGPGHTK*
Ga0068863_1021925201	3300005841	Switchgrass Rhizosphere	AAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRVGPGHNHPSK*
Ga0081455_110380591	3300005937	Tabebuia Heterophylla Rhizosphere	MLRSLKSGLVLAVALSMVPVAFTASGLVGSTASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLTNQPTMSMLEPGRCNQNWGHMMTVENFSDVPAN
Ga0079220_106157841	3300006806	Agricultural Soil	IAPLKIWSEHSMLRSLKSGFALAVALSMVPVAFTATGLVGSSASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLTDQPSTSMLEPGRCNQNWGHMMTVENFSDVPANVWAFGSLGGRIGTGGHH*
Ga0105247_108543721	3300009101	Switchgrass Rhizosphere	MIPPSSRIIAIFTNGVGSMLRTMKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNDGPVAVRLYISNSLTNSSSDSLLEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGPGGHH*
Ga0105237_105563162	3300009545	Corn Rhizosphere	MLRKSNLAIALALAIAAAPVGLSFHGLAGKDTSAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMMTVVNDSNVPAAVWAYGSLGGRIGPGGHH*
Ga0105237_117604141	3300009545	Corn Rhizosphere	MKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGSASGHK*
Ga0105238_102652342	3300009551	Corn Rhizosphere	MLRKSNLAIALALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPYSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMMTVVNDSNVPAAVWAYGSLGGRIGPGHTHP*
Ga0126380_109508442	3300010043	Tropical Forest Soil	KPALVLALAIASVPVGISTSGLVDNTASAVATYRPGAMRPHSTRSYTAAGELRVCNEGPVPVTLYISNSLSTQSSMSRLEPGRCNQNWGHMMSVVNDSDVPANVWAYGSLGGRVGPGHTHP*
Ga0126380_109742391	3300010043	Tropical Forest Soil	MVPVAFTVTGLVGSTASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLSNQPSMSMLEPGRCNQNWGHMMTVENFSDVPANVWAFGSLGGRIGTGGHH*
Ga0126373_103665094	3300010048	Tropical Forest Soil	MLRSFGIVLAAALAAAPVGFSTHGLVEKNASAVATYRPGAMRPNSTRTYTAGGELRVCNEGPVPVRLFITNSLSDAPVDSLLEPGRCNQNWGHMMYVVNDSDVPADVWAYGSLGGRI
Ga0126373_128479921	3300010048	Tropical Forest Soil	MLRSLKSGIVLAAALAVAPVGLSTYGLVVKNASAVATYRPGAMKPGSTRAYTAGGEMRVCNDGPVPVRLYTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRPGRGPGHK*
Ga0126376_129095371	3300010359	Tropical Forest Soil	ALSMVPVAFTAMGLVGSTASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLSNQPSMSMLEPGRCNQNWGHMMTVENFSDVPANVWALGSLGGRIGGGGH*
Ga0126372_110642751	3300010360	Tropical Forest Soil	MLRSLKPALILALAIASLPVGISTSGLVDNTASAVATYRPGAMRPHSTRNYSAAGELRVCNEGPVPVTLYISNSLSTQSSMSRLEPGRCNQNWGHMMSVVNDSDVPANVWAYGSLGGRIGAGHTHK*
Ga0126378_100019265	3300010361	Tropical Forest Soil	LKSGIVLAVALSVVPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLYTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENKVPAGVWAYGGMGGRPGRGPGHTK*
Ga0126378_122513601	3300010361	Tropical Forest Soil	MVPVAFTASGLVGNTASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLFISNSLTNQPTMSMLEPGRCNQNWGHMMTVENFSDVPANVWAFGSLGGRIGTGGHH
Ga0126377_124273112	3300010362	Tropical Forest Soil	MLRSLKPALVLALAIASLPIGISTSGLVDNTASAVATYRPGAMRPHSTRNYSAAGELRVCNEGPVPVTLYISNSLSTQSSMSRLEPGRCNQNWGHMMSVVNDSDVPANVWAYGSLGGRIGPGHTHP*
Ga0105239_112058291	3300010375	Corn Rhizosphere	MIPPSSRIIAIFTNGVGSMLRTMKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGSASGHK*
Ga0126381_1010000271	3300010376	Tropical Forest Soil	LKSGIVLAVALSVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLYTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENKVPAGVWAYGGMGGRPGRGPGHTK*
Ga0126381_1016769671	3300010376	Tropical Forest Soil	MVPVAFTATGLVGSTASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLTNEPTMSMLEPGRCNQNWGHMMTVENFSDVPANVWAFGSLGGRIGGGGH*
Ga0134126_112920431	3300010396	Terrestrial Soil	TYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMITVVNDSNVPAGVWAYGSLGGRVGPGHNHPSK*
Ga0134124_103089322	3300010397	Terrestrial Soil	MKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNSSTDSLLEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGPGGHH*
Ga0134124_130021051	3300010397	Terrestrial Soil	MLRKSNLAIALALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMMTVVNDSNVPAAVWAYGSLGGRIGPGHTHP*
Ga0126369_123410611	3300012971	Tropical Forest Soil	PLSRIIAFLKLWRSSLLRSAKSGILLTAALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRGYTAGGEMRVCNDGPVPVRLYTTNSLTNVPTDSLLEPGRCNQNWGHMMYVVNESGVPAGVWAYGGLGGRPGRGPGHTGK*
Ga0164309_112446041	3300012984	Soil	MKARMALVLAIALAPAGFSVQGLIENNAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYINDSDSLLEPGRCNQSWGHIMTVVNDSNVPADVWAYGSLGGRIGPGGHH*
Ga0164309_116778411	3300012984	Soil	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTESSTESLLEPGRCNQNWGHMMTIVNDSNVPAGVWAYGSLG
Ga0164307_117945531	3300012987	Soil	MKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVTVRLYVNDSVSALEPGRCNQSWGHIMTVVNDSNVPADVWAYGSLG
Ga0164306_113030041	3300012988	Soil	MKARMALVLAIALAPAGLSVQGLIENNAMANATYRSGMMAPHSKRAYTSGGELRVCNNGPVAVRLYINDSDSLLEPGRCNQSWGHIMTVVNDSNVPADVWAYGSLGGRVGQGPGHK*
Ga0157369_109267992	3300013105	Corn Rhizosphere	MKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGAAGGHK*
Ga0163163_102045361	3300014325	Switchgrass Rhizosphere	YGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRVGPGHNHPSK*
Ga0157379_116553821	3300014968	Switchgrass Rhizosphere	MKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNSSTDSLLEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGPGHTHP*
Ga0132258_110203882	3300015371	Arabidopsis Rhizosphere	MLRSLKPALVLALAIASVPVGISTSGLIDNTASAVATYRPGAMRPHSTRSYTAAGELRVCNEGPVPVTLYISNSLSTESTTSLLEPGRCNQNWGHMMSVRNDSDVPANVWAYGSLGGRIGPGHTHP*
Ga0132257_1027348381	3300015373	Arabidopsis Rhizosphere	MLRSLKPALVLALAIASVPVGISTSGLIDNTASAVATYRPGAMRPHSTRSYTAASELRVCNEGPVPVTLYISNSLSTESTTSLLEPGRCNQNWGHMMSVRNDSDVPANVWAY
Ga0132255_1044695281	3300015374	Arabidopsis Rhizosphere	MVPVAFTATGLVGSTASASPTYRLGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLTNEPTMSMLEPGRCNQNWGHMMTVENFSDVPANVWAFGSLGGRIGGGGH*
Ga0182034_116910952	3300016371	Soil	SLKSGIVLAGALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRRYTAGGEMRVCNDGPVPVRLYTTNSLTNVPTDSLLEPGRCNQNWGHMMYVVNENAVPAGVWAYGGMGGRPGRGPGHK
Ga0182040_114515231	3300016387	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLFTTNSLGDPTYSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRPGRGPGAK
Ga0182039_116557161	3300016422	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLFTTNSLGDPTYSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRP
Ga0182038_107103451	3300016445	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRPYTAGGEMRVCNDGPVPVRLYTTNSLTGDPSMSMLEPGRCNQNWGHMMYVVNENDVPADVWAYGSLGGRPG
Ga0210406_106503211	3300021168	Soil	MLRTMKARMALVLAVTLAPAGFSTQGLIEKNAMANATYRPGAMAPHSTRAYTSGGELRVCNDGPVSVRLYISNSLSNGSTDSVLAPGRCNQNWGHMMTVVNESNVPVNVWAYGSLGGRVGQGSGHK
Ga0210406_111785881	3300021168	Soil	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMITVVNDSNVPAGVWAYGSLGGRVG
Ga0210392_100386223	3300021475	Soil	MLRTIKARMALALAVALVPAGFSTQGLIEKNAMANATYRPGAMAPHSTRAYTSGGELRVCNDGPVAVRLYISNSLTNRPTDSALEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGQASGHK
Ga0126371_104388322	3300021560	Tropical Forest Soil	MLRSLKSGIVLAVALSVVPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLYTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENKVPAGVWAYGGMGGRPGRGPGHTK
Ga0126371_119277352	3300021560	Tropical Forest Soil	MLRSLKPALVLALAIASVPVGISTSGLIDNTASAVATYRPGAMRPHSTRSYTAAGELRVCNEGPVPVTLYISNSLSTESTTSLLEPGRCNQNWGHMMSVRNDSDVPANVWAYGSLGGRIGPGHTHP
Ga0126371_135043251	3300021560	Tropical Forest Soil	MPRSLNSALVLTLALVATPVGLSTSGLVGNTASASPTYRPGAMKPHSTRSYTAGGEMRVCNDGPVPVRLYISNSLTNQPSMSMLEPGRCNQNWGHMMTVENFSDVPANVWAFGSLGGRIG
Ga0207710_106413401	3300025900	Switchgrass Rhizosphere	MLRTMKARMALTLAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNSSSDSLLEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGPGGHH
Ga0207707_113959691	3300025912	Corn Rhizosphere	LKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGAAGGHK
Ga0207671_110957541	3300025914	Corn Rhizosphere	MLRKSNLAIALALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMMTVVNDSNVPAAVWAYGSLGGRIGPGHTHP
Ga0207649_112669001	3300025920	Corn Rhizosphere	MLRKSNLAIALALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMMTVVNDSNVPAAVWAY
Ga0207652_106867072	3300025921	Corn Rhizosphere	MLQTLKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGAAGGHK
Ga0207694_107813571	3300025924	Corn Rhizosphere	MLRTMKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGSAS
Ga0207700_102522762	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMMTVVNESNVPANVWAYGSLGGRIGPGGHH
Ga0207639_119819981	3300026041	Corn Rhizosphere	MLRKSNLAIVLALAIAAAPVGLSFHGLAGKDASAGATYRPGDMKPHSTRAYTSGGELRVCNDGPVNVTLLISNSLTGASTNSLLEPGRCNQSWGHMRTVVNDSDVPAAVWAYGSLGGRIGPGHTHP
Ga0207639_122043661	3300026041	Corn Rhizosphere	MLRTMKARMALTLAVALAPAGFSVQGLVENDAMANATYRPGLMAPHSTRAYSSAGELRVCNDGPVAVRLYVNDSDSLLEPGRCNQSWGHIMTVVNDSNVPANVWAYGSLGGRIGSASG
Ga0207641_108553222	3300026088	Switchgrass Rhizosphere	KAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTDSPTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRVGPGHNHPSK
Ga0222749_104564462	3300029636	Soil	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTESSTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRVGPGHNHPSK
Ga0170834_1050772191	3300031057	Forest Soil	MLRTMKARMALVLAVTLAPAGFSTQGLIEKDAMANATYRPGMMAPHSTRAYTSGGELRVCNDGPVTVRLYISNSLTSRPTDSALEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGQAGGHK
Ga0170823_118996192	3300031128	Forest Soil	MLRTMKARMALVLAVTLAPAGFSTQGLIEKDAMANATYRPGMMAPHSTRAYTSGGELRVCNDGPVTVRLYISNSLTSRPTDSALEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGQASGHK
Ga0170824_1085551761	3300031231	Forest Soil	MLRTMKARMALVLAVTLAPAGFSTQGLIEKDAMANATYRPGMMAPHSTRAYTSGGELRVCNDGPVSVRLYISNSLSNGSTDSVLAPGRCNQNWGHMMTVVNESIVPVNVWAYGSLGGRVGQASGHK
Ga0170824_1202809261	3300031231	Forest Soil	PAGFSTQGLIEKDAMANATYRPGMMAPHSTRAYTSGGELRVCNDGPVTVRLYISNSLTSRPTDSALEPGRCNQSWGHMMTVVNESNVPANVWAYGSLGGRIGQASGHK
Ga0170820_133214262	3300031446	Forest Soil	MLRTIKARMALALAVALVPAGFSTQGLIEKDAMANATYRPGMMAPHSTRAYTSGGELRVCNDGPVSVRLYISNSLSNGSTDSVLAPGRCNQNWGHMMTVVNESNVPVNVWAYGSLGGRVGQASGHK
Ga0318534_103785042	3300031544	Soil	MLRSLKSGIVLAIALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVPVRLFTTNSLGDPTYSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRPGRGPGHTK
Ga0318571_101069662	3300031549	Soil	MLRSLKSGIVLAIALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENAVPAGVWAYGGMGGRPGRGPGHK
Ga0318542_103795391	3300031668	Soil	MLRSLKSGIVLAAALAVAPVGLSTYGLVEKNASAVATYRPGAMRPGSTRPYTAGGEMRVCNDGPVPVRLYTTNSLTDTPNMSMLEPGRCNQNWGHMMYVVNDNGVPAGVWAYGGLGGRPGRGPGHK
Ga0318560_107865061	3300031682	Soil	RSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENAVPAGVWAYGGMGGRPGRGPGHK
Ga0318502_104626741	3300031747	Soil	MLRSLKSGIVLAAALAVAPVGLSTYGLVEKNASAVATYRPGAMRPGSTRPYTAGGEMRVCNDGPVPVRLYTTNSLTDTPNMSMLEPGRCNQNWGHMMYVVNDNGVPAGVWAYGGLGGR
Ga0318502_105846341	3300031747	Soil	MLRSLKSGIVLAIALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRPGRGPGHTK
Ga0318526_104630251	3300031769	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLFTTNSLGEPTYSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGALGGRPGRGPGHTK
Ga0318552_106324691	3300031782	Soil	GIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRPYTAGGEMRVCNDGPVPVRLYITNSLGATTDSLLEPGRCNQNWGHMMYVVNESGVPAGIWAYGGMGGRPGRGPGAK
Ga0318564_101893872	3300031831	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENAVPAGVWAYGGMGGRPGRGPGHK
Ga0318544_101893741	3300031880	Soil	VLAIALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENAVPAGVWAYGGMGGRPGRGPGHK
Ga0318520_106097381	3300031897	Soil	MLRSLKSGIVLAIALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENNVPAGVWAYGGMGGRPGRGPGHTK
Ga0306923_115915721	3300031910	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLFTTNSLGDPTYSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRPGRGPGHTK
Ga0306926_121992692	3300031954	Soil	MLRSLKSGIVLAIALAVAPVGLSTYGLVEKNASAVATYRPGAMKPHSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENAVP
Ga0306922_114591561	3300032001	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVTVRLFTTNSLGAPTDSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRPGRGPGHTK
Ga0318562_102661212	3300032008	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRRYTAGGEMRVCNDGPVPVRLVITNSLGDPTDSLLEPGRCNQNWGHMMYVVNENG
Ga0318562_102840831	3300032008	Soil	TRQHNRTSVPPRKKMTPLSRIIAFLKIWRNYMLRSLKSGIVLAAALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRPYTAGGEMRVCNDGPVPVRLYITNSLGATTDSLLEPGRCNQNWGHMMYVVNESGVPAGIWAYGGMGGRPGRGPGAK
Ga0318562_103393552	3300032008	Soil	MLRSLKSGIVLAAALAVAPVGLSTYGLVEKNASAVATYRPGAMRPGSTRPYTAGGEMRVCNDGPVPVRLYTTNSLTDTPNMSMLEPGRCNQNWGHMMYVVNDNGVPAGVWAYGGLGGRPGRGPGAK
Ga0318563_104449312	3300032009	Soil	AALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRPYTAGGEMRVCNDGPVPVRLYITNSLGATTDSLLEPGRCNQNWGHMMYVVNESGVPAGIWAYGGMGGRPGRGPGAK
Ga0318563_105975081	3300032009	Soil	LRSLKSGIVLAAALAVAPVGLSTYGLVEKNASAVATYRPGAMRPGSTRPYTAGGEMRVCNDGPVPVRLYTTNSLTDTPNMSMLEPGRCNQNWGHMMYVVNDNGVPAGVWAYGGLGGRPGRGPGAK
Ga0318575_105092622	3300032055	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRVYTAGGEMRVCNDGPVPVRLFTTNSLGEPTYSLLEPGRCNQNWGHMMYVVNENGVPAGVWAYGGLGGRPGRGPGHTK
Ga0318524_100710801	3300032067	Soil	MLRSLKSGIVLAVALAVAPVGLSTYGLVEKNASAVATYRPGAMKPGSTRPYSSGGELRVCNEGPVPVRLFITNSLGDPTDSLLEPGRCNQNWGHMMYVVNEHGVPAGVWAYGGMGGRAGRGPGHSK
Ga0307472_1011216071	3300032205	Hardwood Forest Soil	MLRTMKARMALALAVALAPAGLSTQGLIEKNAMAGAIYRTGMMAPHSTRAYTSGGELRVCNEGPVTVRLYISNSLTNNSTDSLLEPGRCNQSWGHMMTVVNESNVPAN
Ga0307472_1013924431	3300032205	Hardwood Forest Soil	MLRNLKAGVALALAIAAVPVGLSTYGLIGKDASAAATFRPGAMKPHSTRAYTSGGELRVCNEGPVPVRLFISNSLTESSTESLLEPGRCNQNWGHMMTVVNDSNVPAGVWAYGSLGGRVGPGHNHP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093476

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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