Metagenome Family F093510

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093510
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	71 residues
Representative Sequence	VDELAEVEVETEESDEDARVYAWRVEQLSGLGLSQVIASVVASFVDWHEIARLVERGCSPELALEIVR
Number of Associated Samples	73
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.08 %
% of genes near scaffold ends (potentially truncated)	24.53 %
% of genes from short scaffolds (< 2000 bps)	88.68 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.698 % of family members)
Environment Ontology (ENVO)	Unclassified (22.642 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.170 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.88% β-sheet: 0.00% Coil/Unstructured: 53.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00072	Response_reg	31.13
PF03358	FMN_red	12.26
PF00196	GerE	11.32
PF01197	Ribosomal_L31	6.60
PF01638	HxlR	1.89
PF00258	Flavodoxin_1	0.94
PF01663	Phosphodiest	0.94
PF02922	CBM_48	0.94
PF00174	Oxidored_molyb	0.94
PF02518	HATPase_c	0.94
PF01243	Putative_PNPOx	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	6.60
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.89
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.94
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.64 %
Unclassified	root	N/A	27.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.64 %
Unclassified	root	N/A	27.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.64 %
Unclassified	root	N/A	27.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.28 %
Unclassified	root	N/A	27.36 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.94 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.34 %
Unclassified	root	N/A	27.36 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.36 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.15 %
Spirochaetes bacterium RBG_16_67_19	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_67_19	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.36 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.77 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Spirochaetes bacterium RBG_16_67_19	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_67_19	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.36 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.94 %
Spirochaetes bacterium RBG_16_67_19	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_67_19	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.36 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.94 %
Spirochaetes bacterium RBG_16_67_19	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_67_19	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.36 %
Nocardia asteroides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Mycobacterium simiae complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex	0.94 %
Spirochaetes bacterium RBG_16_67_19	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_67_19	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.36 %
Nocardia asteroides	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Mycobacterium europaeum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium europaeum	0.94 %
Spirochaetes bacterium RBG_16_67_19	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_67_19	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_188377	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300000956\|JGI10216J12902_104239373	Not Available	610	Open in IMG/M
3300000956\|JGI10216J12902_110696366	Not Available	543	Open in IMG/M
3300002568\|C688J35102_118671444	Not Available	583	Open in IMG/M
3300002568\|C688J35102_119636164	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300002568\|C688J35102_119856689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300002568\|C688J35102_120547912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1168	Open in IMG/M
3300002568\|C688J35102_120808810	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300002568\|C688J35102_120883323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300002568\|C688J35102_120933125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2529	Open in IMG/M
3300003267\|soilL1_10132365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300003319\|soilL2_10274908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1087	Open in IMG/M
3300003324\|soilH2_10101363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2901	Open in IMG/M
3300003999\|Ga0055469_10040034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1189	Open in IMG/M
3300004479\|Ga0062595_101957178	Not Available	564	Open in IMG/M
3300005329\|Ga0070683_102163179	Not Available	534	Open in IMG/M
3300005332\|Ga0066388_107711949	All Organisms → cellular organisms → Bacteria → Terrabacteria group	539	Open in IMG/M
3300005336\|Ga0070680_100954850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	740	Open in IMG/M
3300005450\|Ga0066682_10777200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium europaeum	581	Open in IMG/M
3300005458\|Ga0070681_10454137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1194	Open in IMG/M
3300005458\|Ga0070681_10753775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	890	Open in IMG/M
3300005529\|Ga0070741_10002010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	57135	Open in IMG/M
3300005529\|Ga0070741_10084241	All Organisms → cellular organisms → Bacteria	3472	Open in IMG/M
3300005529\|Ga0070741_10204681	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300005546\|Ga0070696_102024925	Not Available	500	Open in IMG/M
3300005614\|Ga0068856_102047818	Not Available	582	Open in IMG/M
3300005618\|Ga0068864_102557628	Not Available	516	Open in IMG/M
3300005764\|Ga0066903_101008722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1523	Open in IMG/M
3300005764\|Ga0066903_106862407	Not Available	591	Open in IMG/M
3300005889\|Ga0075290_1025835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300005937\|Ga0081455_10309405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300005937\|Ga0081455_10340526	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005937\|Ga0081455_10967072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	528	Open in IMG/M
3300005981\|Ga0081538_10098978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1475	Open in IMG/M
3300006031\|Ga0066651_10681622	Not Available	551	Open in IMG/M
3300006046\|Ga0066652_100690011	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300006046\|Ga0066652_101476752	Not Available	632	Open in IMG/M
3300006804\|Ga0079221_11707670	Not Available	513	Open in IMG/M
3300006852\|Ga0075433_10747666	Not Available	855	Open in IMG/M
3300006876\|Ga0079217_10135554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300007004\|Ga0079218_13507672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia asteroides	532	Open in IMG/M
3300009545\|Ga0105237_11532389	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300010375\|Ga0105239_11204764	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300012200\|Ga0137382_10683959	Not Available	735	Open in IMG/M
3300012201\|Ga0137365_10276133	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300012206\|Ga0137380_10834740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300012208\|Ga0137376_11114372	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300012210\|Ga0137378_11551411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300012212\|Ga0150985_113274429	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012350\|Ga0137372_10440800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	978	Open in IMG/M
3300012353\|Ga0137367_10305335	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300012354\|Ga0137366_11223230	Not Available	509	Open in IMG/M
3300012359\|Ga0137385_10559103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300012360\|Ga0137375_11368320	Not Available	529	Open in IMG/M
3300013105\|Ga0157369_12230379	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300014166\|Ga0134079_10496660	Not Available	588	Open in IMG/M
3300014254\|Ga0075312_1063953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300014265\|Ga0075314_1129146	Not Available	570	Open in IMG/M
3300014268\|Ga0075309_1178772	Not Available	553	Open in IMG/M
3300015371\|Ga0132258_10133569	All Organisms → cellular organisms → Bacteria	5922	Open in IMG/M
3300015371\|Ga0132258_10213098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4693	Open in IMG/M
3300015371\|Ga0132258_12586457	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300018422\|Ga0190265_10017570	All Organisms → cellular organisms → Bacteria	5613	Open in IMG/M
3300018422\|Ga0190265_10884539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1016	Open in IMG/M
3300018422\|Ga0190265_12033700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300018429\|Ga0190272_10484550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300018432\|Ga0190275_11227700	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300018432\|Ga0190275_11460865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300018432\|Ga0190275_12997336	Not Available	546	Open in IMG/M
3300018469\|Ga0190270_11351396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	757	Open in IMG/M
3300018476\|Ga0190274_10619444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300018482\|Ga0066669_11754124	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300019377\|Ga0190264_10015385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2421	Open in IMG/M
3300025289\|Ga0209002_10244037	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetes bacterium RBG_16_67_19	1084	Open in IMG/M
3300025318\|Ga0209519_10232107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300025567\|Ga0210076_1036271	Not Available	1060	Open in IMG/M
3300025796\|Ga0210113_1025786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300025945\|Ga0207679_11320822	Not Available	662	Open in IMG/M
3300026095\|Ga0207676_11860168	Not Available	601	Open in IMG/M
3300026535\|Ga0256867_10019994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2869	Open in IMG/M
3300027636\|Ga0214469_1006997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4095	Open in IMG/M
3300027647\|Ga0214468_1039296	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300027647\|Ga0214468_1132366	Not Available	627	Open in IMG/M
3300027650\|Ga0256866_1064898	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300028881\|Ga0307277_10324221	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300028881\|Ga0307277_10454787	Not Available	574	Open in IMG/M
3300030006\|Ga0299907_10246167	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300030006\|Ga0299907_10594785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300030006\|Ga0299907_10613452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300030006\|Ga0299907_10782227	Not Available	721	Open in IMG/M
3300030006\|Ga0299907_11114313	Not Available	572	Open in IMG/M
3300030606\|Ga0299906_10583836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300030619\|Ga0268386_10288295	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300030619\|Ga0268386_10761691	Not Available	623	Open in IMG/M
3300031229\|Ga0299913_10177304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300031229\|Ga0299913_10267257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1694	Open in IMG/M
3300031229\|Ga0299913_10334570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1501	Open in IMG/M
3300031229\|Ga0299913_10611784	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300031229\|Ga0299913_10807384	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300031229\|Ga0299913_11539532	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031938\|Ga0308175_100269273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1720	Open in IMG/M
3300031938\|Ga0308175_102213087	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031939\|Ga0308174_11842032	Not Available	520	Open in IMG/M
3300031965\|Ga0326597_10524946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1284	Open in IMG/M
3300031996\|Ga0308176_11457257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300033417\|Ga0214471_10230826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.91%
Host-Associated	Host-Associated	15.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.08%
Plants	Host-Associated → Plants	15.09%
Aquatic	Environmental → Aquatic	2.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%
Marine	Environmental → Aquatic → Marine	2.83%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.15%
Loam	Environmental → Terrestrial → Soil → Loam	14.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.66%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.74%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	9.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	9.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.77%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.83%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.83%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.83%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_03242430	2199352025	Soil	DASKRKRKESIVDELAEVEFETEESEEDGRVYAWRVEQLSGLGLSHVIASAVASFVDWHEIARLVERGCSPELALEIVR
JGI10216J12902_1042393731	3300000956	Soil	VEELESVEVDELGSVEIRAPDEEALVYAWRVDRLSGLGLSNIVASAVAPFVDWHEIARLVERGCSPELALEI
JGI10216J12902_1106963661	3300000956	Soil	VNELTEIEIGAEESEEDARIYAWRVEQLTGLGFSHVIASAVASFVDWHEIARLVERGCSPEL
C688J35102_1186714441	3300002568	Soil	VEELVEIEVEAGESEEDALIYAWRVERLSELGLSYVIASLVASFVDWHEIARLVERGCSPELALEIVR*
C688J35102_1196361642	3300002568	Soil	AEVETETEESEEDGRVYEWRVEQLSGLGLSHMIASAVASFVDWHEIARLVERGCSPELALEIVR*
C688J35102_1198566892	3300002568	Soil	VVELLEIEVEAAESEEDARVYAWRVEQLSELGLSHVIASLVASFVDWHEIARLVERGCSP
C688J35102_1205479121	3300002568	Soil	RKEPIVDELAEIEVEAEESEEDACVYAWRVEQLSGLGLSQVIANAVASFVDWHEIARLVERGCPPDLALEIVR*
C688J35102_1208088102	3300002568	Soil	VDELAEIEVEGEESEEEARVYAWRVEQLSGLGLSNVIASAVAWCVDWHEIARLIERGCSPELALEIVR*
C688J35102_1208833232	3300002568	Soil	VDELAQVEVETEGSEEDGRVYEWRVEQLSGLGLSHVIASVVAPFVDWHEIARLVERGCSPELALEIVR*
C688J35102_1209331252	3300002568	Soil	VTELAEIEVEAEESEENARVYAWRVEQLSGLGLSHLIASAVASFVDWHEIAGLVERGCSPELALEIVR*
soilL1_101323652	3300003267	Sugarcane Root And Bulk Soil	VEELAEIEVEAEESEEDARIYAWWVEQLSGLGLSHLVASAVATFVDWHDIATLVERGCSPELALEIVR*
soilL2_102749082	3300003319	Sugarcane Root And Bulk Soil	VDELAEIEVEAEESEEDARVYAWRVEKLSGLGLSQVVASAVASFVDWHEIARLVDRGCSPELALEIVR*
soilH2_101013635	3300003324	Sugarcane Root And Bulk Soil	VDELAEIEVEAEESEEDARVYAWRVEKLSGLGLSQVVASAVASFVDWHEIAGLVERGCPPELALEIVR*
Ga0055469_100400342	3300003999	Natural And Restored Wetlands	VEELESVEVDELGSVEIQAPDEDARVYAWRVERLSGLGLSNIVASAVAPFVDWHEIARLVKRGCSPELALEIIR*
Ga0062595_1019571781	3300004479	Soil	VNELAEIEIEAEESEEGARVYAWRVEQLSGLGLSQMVASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0070683_1021631792	3300005329	Corn Rhizosphere	VDELAEVEVETEESDEDARVYAWRVEQLSGLGLSQVIASVVASFVDWHEIARLVERGCSPELALEIVR*
Ga0066388_1077119491	3300005332	Tropical Forest Soil	MAQLTDIVIEESEDDARVYQWRVEQLVKLGLTDVVAYIAAAFVDWHEVANLVQRGCSPELALEILR*
Ga0070680_1009548501	3300005336	Corn Rhizosphere	MDELAEVEVEESEEEGRIYEWRVEQLSGLGLSHVIASAVASFVDWHEIARLVERGCPPELALEIVR*
Ga0066682_107772002	3300005450	Soil	KESIVDELAEVEVETEESEEDGRVYEWRVEQLSGLGLSHVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0070681_104541373	3300005458	Corn Rhizosphere	SSIERERKESIVDELAEFGVELAESDEDGSVYEWRVEQLSALGLSHVIASAVASFVDWHEIARLVERGCPPELALEIVR*
Ga0070681_107537752	3300005458	Corn Rhizosphere	VEELQEIEVAVGKSAEGARIYAWQVEQLAGLGLSSVVASAVATFVDWHEIARLVERGCSPELALEIVR*
Ga0070741_1000201047	3300005529	Surface Soil	VNELTEIVTGAEESEEDARIYAWRVEQLAGLGFSHVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0070741_100842418	3300005529	Surface Soil	VDELFEIEIETVTEQSDEAARVYAWRVEQLSGLGFSHVIASAVASFIDWHEVARLVERGCSPELALEIVR*
Ga0070741_102046815	3300005529	Surface Soil	VDELLEIEVEVEAEESEEGARVYAWRVEQLSGLGLSDVIASAVAPFVDWHEIAGLVERGCSPELALEIVR*
Ga0070696_1020249252	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VEALVDIEIEAGESEEDALVYAWRVERLSELGLSHVIASLVASFVDWHEIARLVERGCSPELALEIVR*
Ga0068856_1020478181	3300005614	Corn Rhizosphere	VEALVEIEIEAGESEEDALVYAWRVERLSELGLSYVIASLVASFVDWHEIARLVERGCSPELALEIVR*
Ga0068864_1025576281	3300005618	Switchgrass Rhizosphere	VEALVDIEIEAGESEEDALVYAWRVERLSELGLSYVIASLVASFVDWHEIARLVERGCSPELALEIVR*
Ga0066903_1010087222	3300005764	Tropical Forest Soil	VNELAEIEVETEESEEDARVYAWRVEQLSGLGLSHVIASAVASFIDWHEIARLVERGCSPELALEIVR*
Ga0066903_1068624071	3300005764	Tropical Forest Soil	VDELAEVEFEAEESEEDGRVYEWRVERLSGLGLSHVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0075290_10258351	3300005889	Rice Paddy Soil	VEELEEIEDAVEESAEGARIYAWRVEQLSGLGLSSVVASAVATFVDWHEIARLVECGCPPELALEIVR*
Ga0081455_103094052	3300005937	Tabebuia Heterophylla Rhizosphere	VEELESVEVDELGSVEIQAPDEDARVYAWRVERLSGLGLSNIVASAVAPFVDWHEIARLVERGCSPELALEIMR*
Ga0081455_103405262	3300005937	Tabebuia Heterophylla Rhizosphere	VEELEEVEVAVEESAEGARIYAWRVEQLSGLGLSNVIASAVATFVDWHEIARLVERGCSPELALEIVR*
Ga0081455_109670721	3300005937	Tabebuia Heterophylla Rhizosphere	MDQVVDIGIEENEEEQLVLAWRVEQLMKLGLSNFIANAVATFVDWHEIARLVEHGCPPELALEIVR*
Ga0081538_100989781	3300005981	Tabebuia Heterophylla Rhizosphere	VEELWSVEVDEVESVEIQASDEDARVYAWRVERLSDLGLSNIVASAVAPLVDWHEIARLVERGCSPELALEIIR*
Ga0066651_106816221	3300006031	Soil	VDELAEVEVETEESEEDGRVYEWRVEQLSGLGLSHVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0066652_1006900111	3300006046	Soil	VDELAEMEIEVEAEESEEDARVYAWRVEQLSGLGFSHLIASAVASFVDWHEIAGLVERGCSPELALEIVR*
Ga0066652_1014767522	3300006046	Soil	VDELAEVEVETEESEEGARVYAWRVEQLSGLGLSQVIASVVASFVDWHEIAHLVERGCSPELALE
Ga0079221_117076701	3300006804	Agricultural Soil	VDELAEVEVENEESEEDARVYAWRVEQLSGLGLSQVIASVVASFVDWHEIAGLVERGCSPELALEIVR*
Ga0075433_107476663	3300006852	Populus Rhizosphere	MVEEFDIELEASDDDALVHGWRVEQLARLGISAFIADAVATFVDWHEIARLVQRGCSPELALEIVR*
Ga0079217_101355542	3300006876	Agricultural Soil	VEELESVEVDELDGVEIQESDEDARVYAWRVERLSDLGLSNLVASAVAPFVDWHEIASLVERGCSPELALAIVR*
Ga0079218_135076721	3300007004	Agricultural Soil	VEDLWSVEVDELESVELPASDEDERVYAWRVERLSDLGLSNLVASAVAPLVDWHEIARLVERGCSPELALEIVR*
Ga0105237_115323892	3300009545	Corn Rhizosphere	IEVEVEVETEESEEGARVYAWRVEQLSGLGLSQVIASVVASFVDWHEIARLVERGCSPDLALEIVR*
Ga0105239_112047642	3300010375	Corn Rhizosphere	VDELAEIEVEVEVETEESEEGARVYAWRVEQLSGLGLSQVIASVVASFVDWHEIARLVERGCSPDLALEIVR*
Ga0137382_106839592	3300012200	Vadose Zone Soil	VNELAEIEVEAEESEEDARVYAWRVEQLSGLGLSQMIASAVASFIDWHEIARLVERGCSPELALEIVR*
Ga0137365_102761332	3300012201	Vadose Zone Soil	VDELAEVEFETEESEEDGRVYEWRVEQLSGLGLSYVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0137380_108347402	3300012206	Vadose Zone Soil	VDELAEVEVETEESEEDGRVYEWRVEQLSGLGLSYVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0137376_111143721	3300012208	Vadose Zone Soil	RRSSNASTRTRKESIVNELAEIEVEAEESEEDARVYAWRVEQLSGLGLSQMIASAVASFIDWHEIARLVERGCSPELALEIVR*
Ga0137378_115514111	3300012210	Vadose Zone Soil	VDGLAEVEFGFEPEESDEDGRVYEWRVEQLSGLGLSYVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0150985_1132744291	3300012212	Avena Fatua Rhizosphere	KESIVDELTAVEFETEESEEDGRVYDWRVEQLSGLGLSQVIASAVASFVDWHEIAHLVEHGCPPELALEIVR*
Ga0137372_104408003	3300012350	Vadose Zone Soil	VNELAEIEVEVEESEEEARVYAWRVEQLSGLGLSQMIASAVASFIDWHEIARLVERGCSPELALEIVR*
Ga0137367_103053351	3300012353	Vadose Zone Soil	VNTNAKESIVDELAEIEVEVEVEESEEDARVYAWRVEQLSGLGLSQVVASAVASLVDWHEIARLVERGCSPELALDIVR*
Ga0137366_112232302	3300012354	Vadose Zone Soil	VDELAEIEVEVEIEVEESEEDARVYAWRVEQLSGLGLSQVVASAVASLVDWHEIARLVERGCSPELALDTVR*
Ga0137385_105591031	3300012359	Vadose Zone Soil	VDELAEVEFETEESEEDGRVYEWRVEHLSGLGLSYVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0137375_113683201	3300012360	Vadose Zone Soil	RSSNASTRTRKESIVNELVETEIEVEAEESEEDARVYAWRVEQLSGLGLSQMIASAVASFIDWHEIARLVERGCSPELALEIVR*
Ga0157369_122303791	3300013105	Corn Rhizosphere	SEVETEESDEDARVYAWRVEQLSGLGLSHVIASAVAWCVDWHEIARLVEQGCPPELALGIVR*
Ga0134079_104966601	3300014166	Grasslands Soil	VDELAEVDVETEECEEEGRVYEWRVEQLSGLGLSHVIASAVASFVDWHEIARLVERGCSPELALEIVR*
Ga0075312_10639531	3300014254	Natural And Restored Wetlands	VEELESVEVDELGSVEIQAPDEDARVYAWRVERLSGLGLSNIVASAVAPFVDWHELARLVERGCSPELALEIIR*
Ga0075314_11291461	3300014265	Natural And Restored Wetlands	MEELESVEVDELGSVEIQAPDEDARVYAWRVERLSGLGLSNIVASAVAPIVDWHEIARLVERGCSPELALEIIR*
Ga0075309_11787721	3300014268	Natural And Restored Wetlands	VEELESVEVDELGSVEIQAPDEDARVYAWRVERLSGLGLSNIVASAVAPFVDWHEIARLVERGCSPELALEIIR*
Ga0132258_1013356910	3300015371	Arabidopsis Rhizosphere	MDELAEIEMEMETEESEDDASVYAWRVKQLSSLGLSYVIASAVASFVDWHEIASLVERGCSPELALEIVR*
Ga0132258_102130985	3300015371	Arabidopsis Rhizosphere	VDELALAEVEVEESGEAARVYTWRVEQLSGLGLSQLVASAVASFVDWHEIARLVERGCPPELALEIVR*
Ga0132258_125864572	3300015371	Arabidopsis Rhizosphere	VEALVDIEIEAGECEEDAVVYAWRVERLSELGLSYVIASLVASFVDWHEIARLVERGCSPELALEIVR*
Ga0190265_100175703	3300018422	Soil	VDELENVWAVELNGVEIQESDEDAQVYAWRVERLSCVGLSNIVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0190265_108845392	3300018422	Soil	VEELESVEIEESAEDTCVYAWRVEQLSGLGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0190265_120337002	3300018422	Soil	VEELESVEVDERDGVEIQESDEDAQVYAWRVERLSDLGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0190272_104845502	3300018429	Soil	VDELENVWAIELNGVEIQESDEDAQVYAWRVERLSCVGLSNIVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0190275_112277002	3300018432	Soil	ELESVELPASDEDERVYAWRVERLSDLGLSNIVASAIAPFVDWHEIARLVERGCSPELALEIVR
Ga0190275_114608651	3300018432	Soil	VEDLWSVEVDELESVELTASDEDERVYAWRVERLSDLGLSNIVASAIAPFVDWHEIARLVERGCSPELALEIVR
Ga0190275_129973361	3300018432	Soil	VDELETVEIDELDGVEIQESDEDTQVYAWRVERLSGLGLSKLVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0190270_113513961	3300018469	Soil	VEELWSVEVDEVESVETQASDEDARVYAWRVERLSYVGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0190274_106194442	3300018476	Soil	VEELESVEVDELGSVEIQAPDEDSLVYAWRVERLSDLGLSNLVASAVAPFVDWHEIASLVERGCSPELALEIVR
Ga0066669_117541241	3300018482	Grasslands Soil	EQSEEDARVYAWRVEQLSGLGFSHVIASAVASFIDWHEIARLIERGCSPELALEIVR
Ga0190264_100153852	3300019377	Soil	VDELENVWAVELNGVEIQESDEDAQVYAWRVERLSCVGLSNIVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0209002_102440371	3300025289	Soil	VEELESVEVDELGSVEVQAPDEDARVYAWRVERLSGLGLSNIVASAVAPFVDWHEIARLVERGCSPELALE
Ga0209519_102321071	3300025318	Soil	VEELESVEVDELGSVEIQAPDEDARVYAWRVERLSGLGLSNIVASAVAPFVDWHEIARLVERGCSPELALEIIR
Ga0210076_10362712	3300025567	Natural And Restored Wetlands	VEHLWSVEVDEQESVEVQASDEDERVYAWRVERLSGLGLSNIVASAIAPFVDWHEIARLVERGCSPELALEIVR
Ga0210113_10257861	3300025796	Natural And Restored Wetlands	RDGVEIQESDEDAQVYAWRVERLSDLGLSNLVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0207679_113208222	3300025945	Corn Rhizosphere	VEALVEIEIEAGESEEDALVYAWRVERLSELGLSYVIASLVASFVDWHEIARLVERGCSPELALEIVR
Ga0207676_118601681	3300026095	Switchgrass Rhizosphere	VEALVDIEIEAGESEEDALVYAWRVERLSELGLSYVIASLVASFVDWHEIARLVERGCSPELALEIVR
Ga0256867_100199942	3300026535	Soil	VEELESVEVDELASVEIQAPDEDARVYAWRVERLSGLGLSNIVASAVAPFVDWHEIERLVERGCSPELALEIIR
Ga0214469_10069973	3300027636	Soil	VEELESVEIEESAEDRCVYAWRVEQLSGLGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0214468_10392963	3300027647	Soil	TVEIDELESGGIDASDEDARVYAWRVERLSYLGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0214468_11323662	3300027647	Soil	VDELENVWDVELNGVEIQESDEDAQVYAWRAERLSCVGLSNIVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0256866_10648982	3300027650	Soil	VEELESVEVDELDGVEIQESDEDARVYAWRVERLSGLGLSNLVASAVAPLVDWHEIACLVERGCSPELALAIVR
Ga0307277_103242211	3300028881	Soil	STARTRTREESIMDQLAEIEVEAEESEEDARVYAWRVERLSGLGLSHVIASAVAPLVDWHEIAGLVERGCSPELALEIVR
Ga0307277_104547871	3300028881	Soil	VDELAEIEVEADESEEDARVYAWRVEQLSGLGLSQVIASAVAWCVDWHEIARLVERGCSPELALEIVR
Ga0299907_102461671	3300030006	Soil	VEDLWSVEVDELESVELPASDEEERVYAWRVERLSDLGLSNIVAWAIAPFVDWHEIARLVERGCSPELALEIVR
Ga0299907_105947852	3300030006	Soil	VEELESVEVDERDGVEIQESDEDAQVYAWRVERLSDLGLSNLVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0299907_106134522	3300030006	Soil	VEELESVEVDELDGVEIQESDEDARVYAWRVERLSYLGLSNLVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0299907_107822271	3300030006	Soil	VDELETVEIDELDGVEIQESDEDARVYAWRVERLSYLGLSNLVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0299907_111143132	3300030006	Soil	VDELENVWAIELNGVEIQESDEDAQVYAWRVERLSCVGLSNIVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0299906_105838362	3300030606	Soil	VEELESVEVDELGSVEIQAPDEDSLVYAWRVERLSGLGLSNIVASAVAPFVDWHEIARLVERGCSPELALEIIR
Ga0268386_102882952	3300030619	Soil	VEELWSVEVEEQESVEVQPSDEDERVYAWRVERLSGLGLSNIVASAVAPIVDWHEIARLVERGCSPELALEIIR
Ga0268386_107616911	3300030619	Soil	VDELETVEIDELESGGIDASDEDARVYAWRVERLSYLGLSNLVASAVAPFVDWHEIARLVERGCSPEL
Ga0299913_101773043	3300031229	Soil	VEELGSVEVTELESVEIQAPDEEARVYAWRVERLSGLGLSNIVASAVAPFVDWHELARLVERGCSPELALEIIR
Ga0299913_102672572	3300031229	Soil	VEDLWSVETDEPESVEFPASDEDERVSAWRVERLSDLGLSNIVASAIAPFVDWHEIARLVERGCSPELALEIVR
Ga0299913_103345702	3300031229	Soil	VDELETVEIDELESGGIDASDEDARVYAWRVERLSYLGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0299913_106117841	3300031229	Soil	VEELESVEVDELDGVEIQESDEDARVYAWRVERLSGLGLSNLVASAVAPLVDWHEIACLVERGCPPELALAIVR
Ga0299913_108073842	3300031229	Soil	VEELEGVEVDELNGVEIQESDEDARVYAWRVERLSYLGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR
Ga0299913_115395321	3300031229	Soil	RIVDELENVWAIELNGVEIQECDEGAQVYAWRVERLSCVGLSNIVASAVAPLVDWHEIARLVERGCSPELALEIVR
Ga0308175_1002692733	3300031938	Soil	VDELAEIEVEAEAPEASEEGARVYEWRVEQLSGLGLSHVIASAVATFVDWHEIAGLVERGCSVELALEIVR
Ga0308175_1022130872	3300031938	Soil	VDELAEVEVETEESDEDARVYAWRVEQLSGLGLSQVIACVVASFVDWHEIAQLVERGCSPELALEIVR
Ga0308174_118420321	3300031939	Soil	LGDPPTREHERKKEWIVVELLEIEVEAAESEEDARVYAWRVEQLSQLGLSHVIASLVASFVDWHEIARLVERGCSPELALEIVR
Ga0326597_105249462	3300031965	Soil	VEDLWSVEVDELESVELPASDEDERVYAWRVERLSDLGLSNIVASAIAPFVDWHEIARLVERGCSPELALEIVR
Ga0308176_114572571	3300031996	Soil	VDELAEVEIEIEESEEDGRVYEWRVEQLSGLGLSHVIASAVAPFVDWHEVARLVERGCSPELALEIVR
Ga0214471_102308263	3300033417	Soil	VEELESVEVDELDGVEIQESDEDARVYAWRVERLSYLGLSNLVASAVAPFVDWHEIARLVERGCSPELALEIVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093510

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences