NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093784

Metagenome / Metatranscriptome Family F093784

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093784
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 47 residues
Representative Sequence MTTAVAEALEALVHLRAEHGALTPADVADAVLTHDLDEAEAEA
Number of Associated Samples 96
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 42.45 %
% of genes near scaffold ends (potentially truncated) 99.06 %
% of genes from short scaffolds (< 2000 bps) 98.11 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.962 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.151 % of family members)
Environment Ontology (ENVO) Unclassified
(31.132 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.226 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.70%    β-sheet: 0.00%    Coil/Unstructured: 49.30%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.63
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF02511Thy1 89.62
PF01904DUF72 2.83
PF12974Phosphonate-bd 0.94
PF07704PSK_trans_fac 0.94
PF04542Sigma70_r2 0.94
PF05425CopD 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 89.62
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 2.83
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.94
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.94
COG1276Putative copper export proteinInorganic ion transport and metabolism [P] 0.94
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.94
COG4423Uncharacterized conserved proteinFunction unknown [S] 0.94
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.96 %
UnclassifiedrootN/A16.04 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459009|GA8DASG01CDHP8All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium548Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1062534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300000893|AP72_2010_repI_A001DRAFT_1064322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300000956|JGI10216J12902_109662405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium597Open in IMG/M
3300000956|JGI10216J12902_111518730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300002568|C688J35102_118309074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300002568|C688J35102_118516091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300004081|Ga0063454_101645248All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300004153|Ga0063455_100306905All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300004153|Ga0063455_100551373All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300005337|Ga0070682_100635240All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300005339|Ga0070660_101813709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300005355|Ga0070671_100327765All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300005367|Ga0070667_101988691Not Available547Open in IMG/M
3300005367|Ga0070667_102114720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300005436|Ga0070713_102359000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300005439|Ga0070711_100792718Not Available803Open in IMG/M
3300005467|Ga0070706_101519609All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005564|Ga0070664_100988352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium791Open in IMG/M
3300005566|Ga0066693_10410127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300005568|Ga0066703_10539838All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300005586|Ga0066691_10941511Not Available508Open in IMG/M
3300005718|Ga0068866_11386185Not Available513Open in IMG/M
3300006028|Ga0070717_10702539All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300006028|Ga0070717_11545376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300006031|Ga0066651_10722189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium536Open in IMG/M
3300006031|Ga0066651_10782543All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300006638|Ga0075522_10100343All Organisms → cellular organisms → Bacteria1570Open in IMG/M
3300006755|Ga0079222_10951024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium730Open in IMG/M
3300006854|Ga0075425_103116882Not Available505Open in IMG/M
3300006871|Ga0075434_101568530Not Available667Open in IMG/M
3300006914|Ga0075436_101038300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium616Open in IMG/M
3300007788|Ga0099795_10572076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300009012|Ga0066710_100126616All Organisms → cellular organisms → Bacteria3496Open in IMG/M
3300009089|Ga0099828_11604247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium573Open in IMG/M
3300009093|Ga0105240_11458445Not Available718Open in IMG/M
3300009162|Ga0075423_12849819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300009545|Ga0105237_11211340Not Available761Open in IMG/M
3300009551|Ga0105238_10366916All Organisms → cellular organisms → Bacteria1430Open in IMG/M
3300010133|Ga0127459_1005190All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia644Open in IMG/M
3300010333|Ga0134080_10516411All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300010362|Ga0126377_11459504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium757Open in IMG/M
3300010373|Ga0134128_12874095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300012004|Ga0120134_1069101All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300012189|Ga0137388_11115510Not Available726Open in IMG/M
3300012189|Ga0137388_11334746Not Available656Open in IMG/M
3300012200|Ga0137382_10108813All Organisms → cellular organisms → Bacteria1838Open in IMG/M
3300012202|Ga0137363_11703331All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300012208|Ga0137376_11337481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium607Open in IMG/M
3300012210|Ga0137378_10603648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1007Open in IMG/M
3300012211|Ga0137377_11294429Not Available659Open in IMG/M
3300012212|Ga0150985_113587292All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300012469|Ga0150984_110057541All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300012918|Ga0137396_11176557Not Available542Open in IMG/M
3300012925|Ga0137419_10911506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300012927|Ga0137416_11379916Not Available638Open in IMG/M
3300012930|Ga0137407_11074707All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300012951|Ga0164300_10768312All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300012951|Ga0164300_11045538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300012985|Ga0164308_10846245All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300012986|Ga0164304_10034349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2629Open in IMG/M
3300012987|Ga0164307_11568013Not Available557Open in IMG/M
3300012989|Ga0164305_12057684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300013104|Ga0157370_11736268All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300013307|Ga0157372_12005908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium665Open in IMG/M
3300013763|Ga0120179_1095124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300014052|Ga0120109_1062288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium848Open in IMG/M
3300015372|Ga0132256_102851692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300015373|Ga0132257_101245408All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300017936|Ga0187821_10295768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium642Open in IMG/M
3300018468|Ga0066662_12507827Not Available544Open in IMG/M
3300018482|Ga0066669_12069919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium536Open in IMG/M
3300024283|Ga0247670_1068718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium644Open in IMG/M
3300025912|Ga0207707_10260090All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300025912|Ga0207707_10717725All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300025914|Ga0207671_11035469Not Available646Open in IMG/M
3300025919|Ga0207657_10814470All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium722Open in IMG/M
3300025928|Ga0207700_11466846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium606Open in IMG/M
3300025929|Ga0207664_11651155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300025932|Ga0207690_11626004All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300025944|Ga0207661_11104699All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300026078|Ga0207702_12103619All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300026121|Ga0207683_10532536All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300027875|Ga0209283_10909773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300028146|Ga0247682_1075056All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium620Open in IMG/M
3300028778|Ga0307288_10128598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium941Open in IMG/M
3300028799|Ga0307284_10328135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300028872|Ga0307314_10084977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium845Open in IMG/M
3300031668|Ga0318542_10572896All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300031713|Ga0318496_10066437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1893Open in IMG/M
3300031720|Ga0307469_10876312All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300031747|Ga0318502_10196366All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300031769|Ga0318526_10042767All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300031769|Ga0318526_10484286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300031770|Ga0318521_10186461All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300031782|Ga0318552_10324597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium783Open in IMG/M
3300031938|Ga0308175_100581073All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300031942|Ga0310916_10178189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1769Open in IMG/M
3300031954|Ga0306926_13014505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium502Open in IMG/M
3300031959|Ga0318530_10479793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium516Open in IMG/M
3300032010|Ga0318569_10075118All Organisms → cellular organisms → Bacteria1500Open in IMG/M
3300032041|Ga0318549_10088363All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300032044|Ga0318558_10207066All Organisms → cellular organisms → Bacteria958Open in IMG/M
3300032052|Ga0318506_10464458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300032770|Ga0335085_10855183Not Available996Open in IMG/M
3300033412|Ga0310810_10816438All Organisms → cellular organisms → Bacteria839Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.15%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.66%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.77%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.94%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.94%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010133Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300012004Permafrost microbial communities from Nunavut, Canada - A30_5cm_6MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013763Permafrost microbial communities from Nunavut, Canada - A15_65cm_0MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028146Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F47_053192302170459009Grass SoilLTEISMTAAVAETLDTLVHLRQEHGTLTPADVAEAVLTFDLDEAEAEALSQDACGARHCARAG
AP72_2010_repI_A100DRAFT_106253413300000837Forest SoilLTDITMTTAVADALEALLHLRDEHGAITPADVADAVLSHDLDEAET
AP72_2010_repI_A001DRAFT_106432213300000893Forest SoilLTDITMTTAVADALEALLHLRDEHGAITPADVADAVLSHDLDEAETEALNHELDAHGAAP
JGI10216J12902_10966240523300000956SoilMTAAVAEALEALLLLRTEQGALTPADVADAVLTHD
JGI10216J12902_11151873023300000956SoilMTGINTTAAVAEALEGLLHLREEHGAITPADVADAVLAHDLDEAEAESLA
C688J35102_11830907423300002568SoilLTEISMTAISTTAAVAEALEGLLHLRDEHGAITPADVADA
C688J35102_11851609123300002568SoilMTAAVAEALDTLIHLRQEHGALTPADVADAVLTHDLDEAEAETLALELTAHDI
Ga0063454_10164524823300004081SoilMTTAVAEALDALVHLRGEHGALTPADVAEAVLTHDLDESEAEALNLEL
Ga0063455_10030690513300004153SoilMTTAVHDALEALLALRLEHGTILPADVAEAVLTHDLDETEAEAL
Ga0063455_10055137313300004153SoilLTEISMTAAVAEALDTLVHLRGEHGALTPADVADAVLTHDLDEA
Ga0070682_10063524013300005337Corn RhizosphereMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDEAEAEEL
Ga0070660_10181370913300005339Corn RhizosphereMTAISTSKAVAEAFEGLIHLRDEHGAITPADVADAVLAHDLDEAEAEILTLELDAHG
Ga0070671_10032776513300005355Switchgrass RhizosphereMTAATAEALDALIHLRQEHGALTPADVAEAVLTHDLDEAE
Ga0070667_10198869113300005367Switchgrass RhizosphereMTTAVHDALEALLALRLEHGTITPADVAEAVLTHDLDETESEAL
Ga0070667_10211472023300005367Switchgrass RhizosphereLTDISMTAISTSKAVAEAFEALILVRDEHGAITPADVADAVLA
Ga0070713_10235900013300005436Corn, Switchgrass And Miscanthus RhizosphereMTAAVAEALETLIHLREEHGVLTPADVAEAVLTFELDEPEAEALN
Ga0070711_10079271813300005439Corn, Switchgrass And Miscanthus RhizosphereMTAATAEALDTLVLLHAEHSVLTPADVADAVLTFDLDEAEAEALAAELKAHEIAPE
Ga0070706_10151960913300005467Corn, Switchgrass And Miscanthus RhizosphereMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDEAEAEELA
Ga0070664_10098835213300005564Corn RhizosphereMTAISTSKAVAEAFEALILVRDEHGAITPADVADAVLAHDLDDAEAEILTLELDAHGAAPEQEEE
Ga0066693_1041012723300005566SoilLTEISMTAAVAEALDTLIHLRGEHGSLTPADVADAV
Ga0066703_1053983813300005568SoilMTAAVAEALEALLHVRDEHGAITPADVADAVLAHDLDE
Ga0066691_1094151123300005586SoilLTEISMTAAVAEALEALLHLRGEHGALTPADVADAVLT
Ga0068866_1138618513300005718Miscanthus RhizosphereLTDISMTTAVHDALEALLALRLEHGTITPADVAEAVLTHDLDETESEALALEL
Ga0070717_1070253923300006028Corn, Switchgrass And Miscanthus RhizosphereLTEISMTAAVAEALEALLTLRTEHGSITPADVADAVLTHDLDEAE
Ga0070717_1154537623300006028Corn, Switchgrass And Miscanthus RhizosphereLTEINLTAAVADALYALHLPPTENGAITAADVADQVLTHDLDENEA
Ga0066651_1072218913300006031SoilMTTAVHDALEALLHLRAENGALTPADLADAVLTHDLDEVEAETLAHELENHGA
Ga0066651_1078254323300006031SoilLTEITMTTAVAEALEALLHLRDEHGAITPADIADAVLAHDLDEAEAEALQHELDAH
Ga0075522_1010034333300006638Arctic Peat SoilLTEISMTAAVAEALEGLLTLRTEHGALTPADVADA
Ga0079222_1095102423300006755Agricultural SoilMTAISTSKAVAEAFEALIHLRDEHGAITPADVADAVLAHDLDDAEAEILTLELDAHGAAPEQE
Ga0075425_10311688223300006854Populus RhizosphereLTDISMTTAVHDALEALLAHRLEHGTITPADVAEAVLTHD
Ga0075434_10156853023300006871Populus RhizosphereLTDISMTTAVHDALEALLAHRLEHGTITPADVAEAVLTHDLDETEAEALARELEDHGAAPEP
Ga0075436_10103830013300006914Populus RhizosphereMTTAVAEALDALVHLREEHGALTPADVADAVLTHDLDETEAEALNLELA
Ga0099795_1057207613300007788Vadose Zone SoilMTPAVHDALEALLALRTEHNVLTAADVADAVLTNDLDEAEAV
Ga0066710_10012661613300009012Grasslands SoilMTAAVAEALEALLHLRDEHGVITPADVADAVLAHD
Ga0099828_1160424713300009089Vadose Zone SoilLTNISLTEISTTQAVAEALEALLHLRDEHGAITPADIADAVLSHDLDEAEAEALA
Ga0105240_1145844523300009093Corn RhizosphereMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDE
Ga0075423_1284981923300009162Populus RhizosphereLTEITMTTAVAEALEALLHLRDEHGSITPADIADAVLAHDLDEAETEALQH
Ga0105237_1121134023300009545Corn RhizosphereMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDETEAEELAHEL
Ga0105238_1036691633300009551Corn RhizosphereLTEIAMTAATAEALDALIHLRQEHGALTPADVAEAVLTHD
Ga0127459_100519023300010133Grasslands SoilLTEISMTAAVAEALDTLIHLRQEHGALTPADVADAVLTHDLDEAEAETLALELTAQDIAP
Ga0134080_1051641113300010333Grasslands SoilLTEITMTAAVAEALDALMHLRTEHGSLTPADVADAVLTHD
Ga0126377_1145950413300010362Tropical Forest SoilMTTAVAEALDALVHLRQEHGALTPADVADAVITHDLDETEAEALNLE
Ga0134128_1287409513300010373Terrestrial SoilMVRRSLTEISMTGINTTAAVAEALEGLLHLREEHGAITPADVADAVLAHDLDEAEAE
Ga0120134_106910113300012004PermafrostLTNISMTEISTTQAVAEALEALLHLRDEHGVITPADVADAVLSHDLDEAETEALAHELDA
Ga0137388_1111551023300012189Vadose Zone SoilMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDEGEAEELAHELESHGAAPEAEE
Ga0137388_1133474623300012189Vadose Zone SoilMTAAVAEALEALLHLRGEHGALTPADVADAVLTHDLDD
Ga0137382_1010881333300012200Vadose Zone SoilLTHITMTTAVHDALEALLHLRAENGAITPANLADAVLTHDLDEVEAETL
Ga0137363_1170333123300012202Vadose Zone SoilMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDEAEAEELAHELESHGAAP
Ga0137376_1133748123300012208Vadose Zone SoilLTNISLTEISTTQAVAEALEALLHLRDEHGVITPADVADAVLSHDLDE
Ga0137378_1060364813300012210Vadose Zone SoilMTAAVADALDALLHLRDEHGSITPADVADAVLTHDLDEAESE
Ga0137377_1129442913300012211Vadose Zone SoilMTAAVAEALEALLHLRGEHGALTPADVADAVLTTTSTTPR
Ga0150985_11358729233300012212Avena Fatua RhizosphereMTTAVHDALEALLALRLEHGTITPADVAEAVLTHDLDETEAE
Ga0150984_11005754133300012469Avena Fatua RhizosphereMTTAVHDALEALLALRLEHGTITPADVAEAVLTHDLDETEAEALA
Ga0137396_1117655723300012918Vadose Zone SoilMTAAVHDALEALLHLRSEHGTITPADVADAVLTNDLDEGEA
Ga0137419_1091150613300012925Vadose Zone SoilMTPAVHDALEALLALRSEHNVLTAADVADAVLTNDLDEAEAEELAHELESH
Ga0137416_1137991613300012927Vadose Zone SoilMTAAVHDALEALLHLRSEHGTITPADVADAVLTNDLDEGEAETLAHELEEHGAAPEAEEE
Ga0137407_1107470713300012930Vadose Zone SoilMTTAVAEALEALVHLRAEHGALTPADVADAVLTHDLDEAEAEA
Ga0164300_1076831213300012951SoilMTTAVAEALDALVHLRQEHGALTPADVAEAVLTHDLD
Ga0164300_1104553813300012951SoilMTTAVAEALEALLHLRDEHGAITPADIADAVLAHDLDEAETEALALELD
Ga0164308_1084624523300012985SoilLTDIRMTGISTTTAVAEGLEGLLQLRDEHGALPPA
Ga0164304_1003434943300012986SoilLTDISMTTAVHDALEALLALRLEHGTITPADVAEAVLTHDLDETESEALALELE
Ga0164307_1156801323300012987SoilMTAAVADALEGLLTLRTEHGALTPADVADAVLTHDLDEAE
Ga0164305_1205768423300012989SoilLTDIRMTGISTTTAVAEALEGLLHLRDEHGALTPADVADAVLAHDL
Ga0157370_1173626813300013104Corn RhizosphereMTTAVAEALDALVHLRQEHGALTPADVADAVITHDLDENE
Ga0157372_1200590823300013307Corn RhizosphereLTEITLTAATAEALDALIHLREEHGALTSADVADAVLTHDLDEAEAETLAHELATHEIAP
Ga0120179_109512413300013763PermafrostMTPAVHDALEALLALRSEHHVLTAADVADAVLTNDLDQAEA
Ga0120109_106228823300014052PermafrostLTNISLTEISTTQAVAEALEALLHLRDEHGVITPADVADAVLSHDLDEAETEALAHELDA
Ga0132256_10285169213300015372Arabidopsis RhizosphereLTDISMTAISTSKAVAEAFEGLIHLRDEHGAITPADVAD
Ga0132257_10124540823300015373Arabidopsis RhizosphereMTAISTSKAVAEAFEGLIHLRDEHGAITPADVADAVLAHDLDDAEAEILTLELDAHGAAPEQE
Ga0187821_1029576823300017936Freshwater SedimentMTTAAVQEALEALLHLRDEHGSLTPADVADAVLAHDLDDAEAETLQAELEA
Ga0066662_1250782723300018468Grasslands SoilLTDTRMTTAAVHDALEALLALRDEQGSLTPADVADAVLTNDL
Ga0066669_1206991923300018482Grasslands SoilLTEIAMTPATAEAFDTLIHLRQEHGALTPAALADAVLAHAVA
Ga0247670_106871813300024283SoilMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDETEAEE
Ga0207707_1026009033300025912Corn RhizosphereMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDEAEAEELAHELESHGAAPEAE
Ga0207707_1071772513300025912Corn RhizosphereMTTAVAEALDALVHLRQEQGALAPADVAEAVLTHDLDE
Ga0207671_1103546913300025914Corn RhizosphereMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDETEAEELAHELE
Ga0207657_1081447023300025919Corn RhizosphereMTAAVSEALEALLALRAEHGALTPADVADAVLTHDLDEAEAEALAQEL
Ga0207700_1146684613300025928Corn, Switchgrass And Miscanthus RhizosphereLTEISMTAAVAEALETLIHLREEHGVLTPADVAEAVLTFELDEPEAEALN
Ga0207664_1165115513300025929Agricultural SoilMTAATAEALDALIHLRQEHGALTPADVAEAVLTHDLDEAEAEALSLELAAHDI
Ga0207690_1162600413300025932Corn RhizosphereLTDISMTAISTSKAVAEAFEGLIHLRDEHGAITPADVADAVLAHDLDE
Ga0207661_1110469913300025944Corn RhizosphereMTTAVAEALDALVHLREEHGALTPADVADAVLTHDLDETEAEALNLELAAHDI
Ga0207702_1210361913300026078Corn RhizosphereMTTAVAEALDALVHLREEHGALTPADVADAVLNHDLDETEAEALNLELA
Ga0207683_1053253613300026121Miscanthus RhizosphereMTAATAEALDALIHLRQEHGALTPADVAEAVLTHDLDEAEAE
Ga0209283_1090977323300027875Vadose Zone SoilLTNISLTEISTTQAVAEALEALLHLRDEHGAITPADIADAVLSHD
Ga0247682_107505623300028146SoilMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDETEA
Ga0307288_1012859833300028778SoilMTAISTSKAVAEAFEALIHLRDEHGAITPADVADAVIAHDLDDA
Ga0307284_1032813523300028799SoilMTPAVHDALEALLALRAEHNVLTAADVADAVLTNDLDEAEAEELAHELESHGAAPEAEE
Ga0307314_1008497733300028872SoilMTAISTSKAVAEAFEALIHLRDEHGAITPADVADAVLAHDLDEAEAEGLALE
Ga0318542_1057289623300031668SoilMISAAVSDALEALLALRDEHGSLTPDDVADQVPTHDLDDAE
Ga0318496_1006643713300031713SoilMISAAVSDALEALLALRDEHGSLTPDDVADQVLTHDLDDAEAEALGAELDAHGAAP
Ga0307469_1087631223300031720Hardwood Forest SoilMTAATAEALDALIHLRQEHGALTPADVADAVLTHDLDE
Ga0318502_1019636623300031747SoilMTTAVAEALEQLLNLRAEHGSITPAEVADTVLAHDLDEQEAE
Ga0318526_1004276713300031769SoilMTTAVAEALEQLLNLRAEHGSITPAEVADTVLAHDLDEQEAEALEHELEAHGAAPELEEE
Ga0318526_1048428613300031769SoilMISAAVSDALEALLALRDEHGSLTPDDVADQVLTHDLDDAEAEALGAELD
Ga0318521_1018646123300031770SoilMISAAVSDALEALLALRDEHGSLTPDDVADQVLTHDLDDAEA
Ga0318552_1032459713300031782SoilMTTAVAEALEQLLNLRAEHGSITPAEVADAVLAHDLDEQEAETLEHELEAHGAA
Ga0308175_10058107313300031938SoilMTTAVAEALDALVHLRGEHGALTPADVAEAVLTHDLDENEAEAL
Ga0310916_1017818943300031942SoilMTTAVAEALEQLLNLRAEHGSITPAEVADTVLAHDLDEQEAEALEHELE
Ga0306926_1301450513300031954SoilMTTAVAEALEQLLNLRAEHGSITPAEVADTVLAHDLDEQEAEALEHELEAHGAAP
Ga0318530_1047979323300031959SoilMTTAVAEALEQLLNLRAEHGSITPAEVADTVLAHDLDEQEAEALEHELEAHGAA
Ga0318569_1007511813300032010SoilMISAAVSDALEALLALRDEHGSLTPDDVADQVLTHDLDDAE
Ga0318549_1008836333300032041SoilMISAAVSDALEALLALRDEHGSLTPDDVADQVLTHDLDDAEAE
Ga0318558_1020706613300032044SoilMISAAVSDALEALLALRDEHGSLTPDDVADQVLTHDLDDAEAEALGV
Ga0318506_1046445823300032052SoilMTTAVAEALEQLLNLRAEHGSITPAEVADTVLAHDLDEQEAEALE
Ga0335085_1085518323300032770SoilMTAATAEALDTLVLLHAEHSVLTPADVADAVLTFDLDEAEAEALQAELKAH
Ga0310810_1081643813300033412SoilMTTAVAEALDALVHLREEHGALTPADVADAVLTHD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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