NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F093793

Metagenome Family F093793

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093793
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 44 residues
Representative Sequence MTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ
Number of Associated Samples 62
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 82.08 %
% of genes near scaffold ends (potentially truncated) 33.96 %
% of genes from short scaffolds (< 2000 bps) 85.85 %
Associated GOLD sequencing projects 48
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (57.547 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(52.830 % of family members)
Environment Ontology (ENVO) Unclassified
(75.472 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.623 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 77.78%    β-sheet: 0.00%    Coil/Unstructured: 22.22%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01381HTH_3 10.38
PF12236Head-tail_con 1.89
PF10522RII_binding_1 0.94
PF12844HTH_19 0.94
PF01507PAPS_reduct 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.55 %
All OrganismsrootAll Organisms42.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10033658Not Available2227Open in IMG/M
3300000116|DelMOSpr2010_c10023487Not Available2971Open in IMG/M
3300000116|DelMOSpr2010_c10055016All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P1711Open in IMG/M
3300000116|DelMOSpr2010_c10059720All Organisms → Viruses → Predicted Viral1611Open in IMG/M
3300000116|DelMOSpr2010_c10151195Not Available795Open in IMG/M
3300000116|DelMOSpr2010_c10166792Not Available737Open in IMG/M
3300000116|DelMOSpr2010_c10199386Not Available642Open in IMG/M
3300000117|DelMOWin2010_c10101988All Organisms → Viruses → Predicted Viral1049Open in IMG/M
3300000117|DelMOWin2010_c10114431Not Available956Open in IMG/M
3300000117|DelMOWin2010_c10130418Not Available861Open in IMG/M
3300000117|DelMOWin2010_c10215777Not Available581Open in IMG/M
3300000117|DelMOWin2010_c10253184Not Available514Open in IMG/M
3300000947|BBAY92_10001027All Organisms → cellular organisms → Bacteria → Proteobacteria6860Open in IMG/M
3300003427|JGI26084J50262_1020187All Organisms → Viruses → Predicted Viral2126Open in IMG/M
3300006025|Ga0075474_10242513Not Available543Open in IMG/M
3300006026|Ga0075478_10249879Not Available532Open in IMG/M
3300006027|Ga0075462_10072527Not Available1082Open in IMG/M
3300006637|Ga0075461_10103055Not Available896Open in IMG/M
3300006735|Ga0098038_1098446All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp.1011Open in IMG/M
3300006802|Ga0070749_10215269All Organisms → Viruses → Predicted Viral1096Open in IMG/M
3300006802|Ga0070749_10321230Not Available865Open in IMG/M
3300006802|Ga0070749_10481467Not Available678Open in IMG/M
3300006802|Ga0070749_10630157Not Available577Open in IMG/M
3300006802|Ga0070749_10686204Not Available548Open in IMG/M
3300006803|Ga0075467_10231242All Organisms → Viruses → Predicted Viral1012Open in IMG/M
3300006810|Ga0070754_10250953All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp.808Open in IMG/M
3300006810|Ga0070754_10347133Not Available657Open in IMG/M
3300006916|Ga0070750_10226875All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300006916|Ga0070750_10359348Not Available613Open in IMG/M
3300006919|Ga0070746_10197555Not Available959Open in IMG/M
3300006919|Ga0070746_10322060All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300006920|Ga0070748_1248348Not Available640Open in IMG/M
3300007231|Ga0075469_10160362Not Available610Open in IMG/M
3300007234|Ga0075460_10284758All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300007344|Ga0070745_1053387All Organisms → Viruses → Predicted Viral1657Open in IMG/M
3300007344|Ga0070745_1090899All Organisms → Viruses → Predicted Viral1203Open in IMG/M
3300007344|Ga0070745_1178372All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium793Open in IMG/M
3300007539|Ga0099849_1071433All Organisms → Viruses → Predicted Viral1416Open in IMG/M
3300007539|Ga0099849_1167946Not Available840Open in IMG/M
3300007539|Ga0099849_1229338Not Available689Open in IMG/M
3300007640|Ga0070751_1087332All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300007640|Ga0070751_1294122Not Available607Open in IMG/M
3300007640|Ga0070751_1382431Not Available510Open in IMG/M
3300009001|Ga0102963_1139032Not Available981Open in IMG/M
3300009001|Ga0102963_1251537Not Available699Open in IMG/M
3300011118|Ga0114922_10630770All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales881Open in IMG/M
3300011127|Ga0151665_1120464Not Available556Open in IMG/M
3300011253|Ga0151671_1157498Not Available515Open in IMG/M
3300017717|Ga0181404_1052188All Organisms → Viruses → Predicted Viral1028Open in IMG/M
3300017726|Ga0181381_1006799All Organisms → Viruses → Predicted Viral2774Open in IMG/M
3300017762|Ga0181422_1014640All Organisms → cellular organisms → Bacteria2602Open in IMG/M
3300017782|Ga0181380_1122854Not Available892Open in IMG/M
3300017783|Ga0181379_1339139Not Available507Open in IMG/M
3300017824|Ga0181552_10135088All Organisms → Viruses → Predicted Viral1329Open in IMG/M
3300017824|Ga0181552_10182861All Organisms → Viruses → Predicted Viral1094Open in IMG/M
3300017986|Ga0181569_10356392Not Available1006Open in IMG/M
3300018416|Ga0181553_10529877Not Available627Open in IMG/M
3300018416|Ga0181553_10555889Not Available609Open in IMG/M
3300018418|Ga0181567_11020945Not Available516Open in IMG/M
3300021373|Ga0213865_10104397Not Available1506Open in IMG/M
3300021958|Ga0222718_10071025All Organisms → Viruses → Predicted Viral2128Open in IMG/M
3300021958|Ga0222718_10124903All Organisms → Viruses → Predicted Viral1483Open in IMG/M
3300021958|Ga0222718_10199481All Organisms → Viruses → Predicted Viral1093Open in IMG/M
3300021958|Ga0222718_10206787All Organisms → Viruses → Predicted Viral1068Open in IMG/M
3300021959|Ga0222716_10133935Not Available1635Open in IMG/M
3300021964|Ga0222719_10025618All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales4674Open in IMG/M
3300021964|Ga0222719_10150407All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium1642Open in IMG/M
3300022057|Ga0212025_1049191Not Available727Open in IMG/M
3300022057|Ga0212025_1069068Not Available610Open in IMG/M
3300022068|Ga0212021_1004230All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.2083Open in IMG/M
3300022071|Ga0212028_1070469Not Available654Open in IMG/M
3300022071|Ga0212028_1086003Not Available587Open in IMG/M
3300022072|Ga0196889_1075151Not Available634Open in IMG/M
3300022074|Ga0224906_1001847Not Available10007Open in IMG/M
3300022167|Ga0212020_1044616Not Available753Open in IMG/M
3300022187|Ga0196899_1027468All Organisms → Viruses → Predicted Viral2025Open in IMG/M
3300022187|Ga0196899_1047958All Organisms → Viruses → Predicted Viral1413Open in IMG/M
3300022187|Ga0196899_1065283All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pelagibacter phage HTVC204P1149Open in IMG/M
3300022187|Ga0196899_1134583Not Available700Open in IMG/M
3300022187|Ga0196899_1152840Not Available640Open in IMG/M
3300022925|Ga0255773_10287913Not Available679Open in IMG/M
3300022925|Ga0255773_10343043Not Available590Open in IMG/M
3300023175|Ga0255777_10481026All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300025086|Ga0208157_1016521All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp.2316Open in IMG/M
3300025102|Ga0208666_1119952All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp.624Open in IMG/M
3300025508|Ga0208148_1002544All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp.6453Open in IMG/M
3300025508|Ga0208148_1028944Not Available1508Open in IMG/M
3300025652|Ga0208134_1108529All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300025671|Ga0208898_1070168Not Available1169Open in IMG/M
3300025671|Ga0208898_1078169Not Available1074Open in IMG/M
3300025671|Ga0208898_1141993Not Available661Open in IMG/M
3300025674|Ga0208162_1058774All Organisms → Viruses → Predicted Viral1258Open in IMG/M
3300025759|Ga0208899_1039828All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2108Open in IMG/M
3300025759|Ga0208899_1136046Not Available861Open in IMG/M
3300025769|Ga0208767_1083030All Organisms → Viruses → Predicted Viral1341Open in IMG/M
3300025853|Ga0208645_1045264Not Available2141Open in IMG/M
3300025853|Ga0208645_1168497All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales811Open in IMG/M
3300025870|Ga0209666_1405010Not Available506Open in IMG/M
3300029448|Ga0183755_1046352All Organisms → cellular organisms → Bacteria1129Open in IMG/M
3300032257|Ga0316205_10111041All Organisms → Viruses → Predicted Viral1134Open in IMG/M
3300032277|Ga0316202_10193330Not Available945Open in IMG/M
3300032277|Ga0316202_10567314Not Available534Open in IMG/M
3300034374|Ga0348335_062685All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp.1351Open in IMG/M
3300034374|Ga0348335_122606Not Available766Open in IMG/M
3300034418|Ga0348337_180160Not Available553Open in IMG/M
3300034418|Ga0348337_187671Not Available531Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous52.83%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine11.32%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh8.49%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.60%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.66%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.83%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat2.83%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.89%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.89%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.89%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.94%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.94%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.94%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007231Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300011127Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_5, 0.02EnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017762Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017783Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022071Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300023175Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaGEnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025870Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300032257Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyriteEnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1003365863300000115MarineMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLIQ*
DelMOSpr2010_1002348753300000116MarineMTKKTLIEYTILFVLGLIITLGFINPISKDLTWWKLIYISKDLF*
DelMOSpr2010_1005501623300000116MarineMTKKQITEYLILFVLGLIITIGFINPVSKEYTWWNLIYQSKDLIQ*
DelMOSpr2010_1005972053300000116MarineMTKKQITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQTKDLIQ*
DelMOSpr2010_1015119513300000116MarineMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYKSKDLIQ*
DelMOSpr2010_1016679223300000116MarineMTKKQITEYLILFVLGLIITIGFINPISKKYTWWNAIHITKDLYR*
DelMOSpr2010_1019938623300000116MarineMTKKQITEYLILFVLGLIITIGFVNPVSKKYTWWNAIHITKDLYN*
DelMOWin2010_1010198823300000117MarineMTKKQITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQSKDLFQ*
DelMOWin2010_1011443123300000117MarineMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ*
DelMOWin2010_1013041833300000117MarineMTKKEITEYLILFVLGLIITIGFVNPVSKKYTWWNAIHITKDLYN*
DelMOWin2010_1021577723300000117MarineMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ*
DelMOWin2010_1025318423300000117MarineMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLIQ*
BBAY92_1000102753300000947Macroalgal SurfaceMMKQLVKEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLF*
JGI26084J50262_102018743300003427MarineMTKKQITEYLILFVLGLIITIGFVNPISKKYTWYNAIYMTKDLYK*
Ga0075474_1024251323300006025AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ*
Ga0075478_1024987923300006026AqueousMTKKQITEYLILFVLGLIITIGFINPVSKEYTWWNLIYQTKDLYN*
Ga0075462_1007252713300006027AqueousMTKKQITEYLILFVLGLIITIGFINPVSKEYTWWNLIYQTKDLIQ*
Ga0075461_1010305543300006637AqueousNMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ*
Ga0098038_109844633300006735MarineMTKKTLIEYTIMFVLGLIITLGFINPISKDLTWWKLIYITKDLF*
Ga0070749_1021526913300006802AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQTKDLIQ*
Ga0070749_1032123043300006802AqueousMTKKQIAEYIILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ*
Ga0070749_1048146733300006802AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQT
Ga0070749_1063015723300006802AqueousMTKKQITEYLILFVLGLIITIGFINPVSKHYTWWNLIYQTKDLIQ*
Ga0070749_1068620413300006802AqueousEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ*
Ga0075467_1023124233300006803AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ*
Ga0070754_1025095323300006810AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKYYTWWNLIYQTKDLFQ*
Ga0070754_1034713323300006810AqueousMTKKQIAEYIILFVLGLIITIGFVNPVSKEYTWWNLIYQSKNLFQ*
Ga0070750_1022687543300006916AqueousQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ*
Ga0070750_1035934823300006916AqueousMTKKQIAEYIILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLF
Ga0070746_1019755513300006919AqueousTMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ*
Ga0070746_1032206013300006919AqueousKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ*
Ga0070748_124834823300006920AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLFQ*
Ga0075469_1016036223300007231AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLFQ*
Ga0075460_1028475813300007234AqueousLFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ*
Ga0070745_105338743300007344AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQTKDLFQ*
Ga0070745_109089943300007344AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNL
Ga0070745_117837223300007344AqueousMTKKQIAEYIILFVLGLIITIGFVNPVSKEYTWWNLI
Ga0099849_107143343300007539AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQT
Ga0099849_116794613300007539AqueousLILFVLGLIITIGFINPVSKEYTWWNLIYQSKDLFQ*
Ga0099849_122933813300007539AqueousEITEYLILFVLGLIITIGFVNPVSKKYTWWNAIHITKDLYN*
Ga0070751_108733233300007640AqueousMTKKEITEYLILFVLGLIITIGFINPVSKEYTWWNLIYQTKDLIQ*
Ga0070751_129412223300007640AqueousMTKKEITEYIILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLIQ*
Ga0070751_138243123300007640AqueousMTKKQITEYLILFVLGLIITIGFINPVSKHYTWWNLIYQTKDLI
Ga0102963_113903213300009001Pond WaterQITEYLILFALGLIITIGFINPISKDYTWWNLIYISKDLTQ*
Ga0102963_125153723300009001Pond WaterMTKKQIAEYIILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLYN*
Ga0114922_1063077033300011118Deep SubsurfaceKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ*
Ga0151665_112046423300011127MarineMTKKQIAEYIILFVLGLTITIGFVNPVSKEYTWWNLIYQSKDLYN*
Ga0151671_115749813300011253MarineMTKKQIAEYIILFVLGLTITIGFVNPVSKEYTWWNLIYQSKDLIQ*
Ga0181404_105218823300017717SeawaterMTKKQITEYLILFVLGLIITIGFVNPISKTYTWWNLIHITKDLYN
Ga0181381_100679963300017726SeawaterMTKKQITEYLILLALGLIITIGFVNPISKTYTWWNLIHITKDLYK
Ga0181422_101464053300017762SeawaterMTKKQITEYLILFVLGLIIIIGFVNPVSKKYTWYNAIYMTKDLYK
Ga0181380_112285423300017782SeawaterMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ
Ga0181379_133913923300017783SeawaterMTKKTLIEYTILFVLGLIITLGFINPISKDLTWWKLIYI
Ga0181552_1013508833300017824Salt MarshMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLIQ
Ga0181552_1018286123300017824Salt MarshMTKKQITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQSKDLFQ
Ga0181569_1035639243300017986Salt MarshMTRKQIAEYLILFVLGLVITIGFINPVNKDYTWWNLIYQTKDLYN
Ga0181553_1052987723300018416Salt MarshMTKKEITEYLILFVLGLVITIGFINPVNKDYTWWNLIYQSKDLFQ
Ga0181553_1055588913300018416Salt MarshMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ
Ga0181567_1102094533300018418Salt MarshMTRKQITEYLILFVLGLVITIGFINPVNKDYTWWNLIYQSKDLFQ
Ga0213865_1010439763300021373SeawaterMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIY
Ga0222718_1007102543300021958Estuarine WaterMTKKQITEYLILFVLGLIITIGFVNPVSKKYTWYNAIYMTKDLYK
Ga0222718_1012490323300021958Estuarine WaterMTKKQITEYIILFVLGLIITIGFVNPVSKELTWWNLIYQSKDLYN
Ga0222718_1019948123300021958Estuarine WaterMTKKQIAEYIILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLIQ
Ga0222718_1020678743300021958Estuarine WaterMTKKQITEYLILFVLGLIITIGFVNPISKKYTWYNAIYMTKDLYK
Ga0222716_1013393543300021959Estuarine WaterMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLYN
Ga0222719_10025618103300021964Estuarine WaterMTKKQITEYLILFVLGLIITIGFVNPISKKYTWWNAIHITKDLYR
Ga0222719_1015040743300021964Estuarine WaterMTKKQITEYIILFVLGLIITIGFVNPISKEYTWWNLIYQSKDLFQ
Ga0212025_104919133300022057AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKYYTWWNLIYQTKDLFQ
Ga0212025_106906843300022057AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQSKDLF
Ga0212021_100423053300022068AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYKSKDLIQ
Ga0212028_107046943300022071AqueousEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLFQ
Ga0212028_108600323300022071AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKKYTWWNAIHITKDLYN
Ga0196889_107515123300022072AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ
Ga0224906_1001847263300022074SeawaterMTKKQIAEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLTQ
Ga0212020_104461633300022167AqueousMTKKQIAEYLILFVLGLIITIGFVNPVSKKYTWWNAIHITKDLYN
Ga0196899_102746853300022187AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ
Ga0196899_104795833300022187AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKYYTWWNLIYQTKDLFQ
Ga0196899_106528333300022187AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSK
Ga0196899_113458333300022187AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKKYTWWNLIY
Ga0196899_115284023300022187AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQTKDLIQ
Ga0255773_1028791323300022925Salt MarshMTKKEIAEYLILFVLGLVITIGFINPVNKDYTWWNLIYQSKDLFQ
Ga0255773_1034304313300022925Salt MarshTEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLIQ
Ga0255777_1048102613300023175Salt MarshMRRFNMTRKQIAEYLILFVLGLVITIGFINPVNKDYTWWNLIYQTKDLYN
Ga0208157_101652183300025086MarineMTKKTLIEYTIMFVLGLIITLGFINPISKDLTWWKLIYITKDLF
Ga0208666_111995213300025102MarineMTKKTLIEYTIMFVLGLIITLGFINPISKDLTWWKLIYI
Ga0208148_100254443300025508AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQTKDLIQ
Ga0208148_102894433300025508AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLFQ
Ga0208134_110852913300025652AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQTKDLI
Ga0208898_107016843300025671AqueousMTKKQITEYLILFVLGLIITIGFVNPVSKKYTWWNAIHITKDLYN
Ga0208898_107816913300025671AqueousECNNMTKKEITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYKSKDLIQ
Ga0208898_114199323300025671AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKKYTWWNLIYQTKDLIQ
Ga0208162_105877453300025674AqueousNTRFNMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLFQ
Ga0208899_103982843300025759AqueousMTKKQIAEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ
Ga0208899_113604653300025759AqueousFRSSKGAVLMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ
Ga0208767_108303053300025769AqueousMTKKEITEYLILFVLGLIITIGFVNPVSKKYTWWNAIHI
Ga0208645_104526423300025853AqueousMTKKQITEYLILFVLGLIITIGFINPVSKHYTWWNLIYQTKDLIQ
Ga0208645_116849723300025853AqueousMTKKQIAEYIILFVLGLIITIGFVNPVSKEYTWWNLIYQSKNLFQ
Ga0209666_140501023300025870MarineMTKKTLIEYTIIFVLGLIITLGFINPISKDLTWWNLIYISKDLF
Ga0183755_104635223300029448MarineMTKKEITEYLILFVLGLIITIGFINPVNKEYTWWNLIYQTKDLFQ
Ga0316205_1011104123300032257Microbial MatMTKKQITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQTKDLFQ
Ga0316202_1019333023300032277Microbial MatMTKKQIAEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQSKDLIQ
Ga0316202_1056731433300032277Microbial MatTKKEITEYLILFVLGLIITIGFVNPVSKHYTWWNLIYQSKDLIQ
Ga0348335_062685_3_1373300034374AqueousMTKKEITEYLILFVLGLIITIGFINPVSKEYTWWNLIYQTKDLIQ
Ga0348335_122606_225_3623300034374AqueousMTKKQITEYLILFVLGLIITIGFINPVSKEYTWWNLIYQTKDLIQ
Ga0348337_180160_373_5523300034418AqueousQKLLLFRSSKGAVLMTKKQITEYLILFVLGLIITIGFVNPVSKEYTWWNLIYQTKDLIQ
Ga0348337_187671_3_1343300034418AqueousKKQIAEYLILFVLGLIITIGFVNPVSKKYTWWNAIHITKDLYN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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