Metagenome / Metatranscriptome Family F093795

Basic Information
Family ID	F093795
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	70 residues
Representative Sequence	PTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK
Number of Associated Samples	98
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	15.09 %
% of genes from short scaffolds (< 2000 bps)	14.15 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (91.509 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (20.755 % of family members)
Environment Ontology (ENVO)	Unclassified (69.811 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (85.849 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.88% β-sheet: 17.58% Coil/Unstructured: 61.54%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.51 %
All Organisms	root	All Organisms	8.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.51 %
cellular organisms	root	All Organisms → cellular organisms	8.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.49 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002483\|JGI25132J35274_1109072	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300006637\|Ga0075461_10077374	Not Available	1059	Open in IMG/M
3300006737\|Ga0098037_1302923	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300009074\|Ga0115549_1071429	Not Available	1196	Open in IMG/M
3300009442\|Ga0115563_1105556	Not Available	1195	Open in IMG/M
3300009505\|Ga0115564_10362078	All Organisms → cellular organisms → Bacteria → Proteobacteria	714	Open in IMG/M
3300017706\|Ga0181377_1039664	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300017824\|Ga0181552_10226832	Not Available	951	Open in IMG/M
3300018417\|Ga0181558_10158848	Not Available	1334	Open in IMG/M
3300020379\|Ga0211652_10070773	Not Available	1047	Open in IMG/M
3300020404\|Ga0211659_10328670	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300020440\|Ga0211518_10186088	Not Available	1030	Open in IMG/M
3300020810\|Ga0181598_1260045	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300022837\|Ga0222711_1006112	All Organisms → cellular organisms → Bacteria → Proteobacteria	2201	Open in IMG/M
3300025133\|Ga0208299_1239374	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300025138\|Ga0209634_1234674	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	87.74%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	11.32%
Freshwater	Environmental → Aquatic → Freshwater	0.94%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	22.64%
Pelagic	Environmental → Aquatic → Marine → Pelagic	16.98%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	13.21%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.26%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	11.32%
Coastal	Environmental → Aquatic → Marine → Coastal	9.43%
Strait	Environmental → Aquatic → Marine → Strait	8.49%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	20.75%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	16.98%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.26%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	11.32%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	11.32%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.43%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.49%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.72%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.89%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	20.75%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	16.98%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	11.32%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.38%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.49%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	6.60%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.72%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.72%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.83%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.89%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.89%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.89%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	1.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.94%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.94%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001952	Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300005838	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNA	Environmental	Open in IMG/M
3300005931	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK9	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300010936	Marine microbial communities from surface seawater of North Pacific Subtropical Gyre ? Stn. ALOHA, 15m	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300013188	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_Metagenome	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019098	Metatranscriptome of marine microbial communities from Baltic Sea - GS684_0p1	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020246	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX555934-ERR599105)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020393	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020461	Marine microbial communities from Tara Oceans - TARA_B100000401 (ERX556127-ERR599150)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022837	Saline water microbial communities from Ace Lake, Antarctica - #1699	Environmental	Open in IMG/M
3300022842	Saline water microbial communities from Ace Lake, Antarctica - #46	Environmental	Open in IMG/M
3300022843	Saline water microbial communities from Ace Lake, Antarctica - #5	Environmental	Open in IMG/M
3300022851	Saline water microbial communities from Ace Lake, Antarctica - #1237	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300023294	Saline water microbial communities from Ace Lake, Antarctica - #732	Environmental	Open in IMG/M
3300023296	Saline water microbial communities from Ace Lake, Antarctica - #604	Environmental	Open in IMG/M
3300023709	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025821	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300028008	Seawater microbial communities from Monterey Bay, California, United States - 1D_r	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20152J14361_101154462	3300001344	Pelagic Marine	ESLVEDFSLIPVVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK*
JGI20151J14362_101472861	3300001346	Pelagic Marine	SGVYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMTGTDRQKIIGALAGGVINTYFSYAGPTDK*
JGI20151J14362_102010981	3300001346	Pelagic Marine	GEVADPTENLVDDFNLVPIITECKNTAYFPVQTFVTRELQGSDEQKVIGALAGGIINTYFSYAGTIDK*
JGI20160J14292_102391322	3300001349	Pelagic Marine	DFGLVPVIAECTNTAHLPLHTFVTKEMQGTERQKIIGALAGGIINTYFSYAGPIDK*
JGI24003J15210_101435251	3300001460	Marine	LIDDFNLVPMLTDCTNTANFPIQTFITRDLQGSDEQKVIGALAGGIINTYFSYAGPVDK*
GOS2224_10089494	3300001952	Marine	PTENLMEDFGLVPVITDCTNTAHLPLHTFVTKEMQGTERQKIIGALSGGIINTYFSYAGTIDK*
JGI25132J35274_10126015	3300002483	Marine	FTEQSGVYGEMPFDPTYNLMEDFSLVPVIAECKNTAHLPLHTFVTKEMEGSDRQKIIGALAGGVINTYFSYAGPIDK*
JGI25132J35274_11089912	3300002483	Marine	EDFSLIPIVADCHNTVHLPXHTFVTKEMQGTDRQKIIGALSGGIINTYFSYAGPIDK*
JGI25132J35274_11090722	3300002483	Marine	GHSTWHFQFFTEQPDVFGDQTDPTENLVEDFNLVPIVAECSNTAHFPLQTFVTKDLTGTNQQKVISALAGGVKNTYFSYAGKVDK*
Ga0076924_10869673	3300005747	Marine	ENLVEDFNLVPVITDCTNTAHMPIQTFITQDLKGTDEQKVIGALAGGVINTYFSYAGHIDK*
Ga0008649_100611745	3300005838	Marine	DPTASLVEDFSLIPIVADCMNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPTDK*
Ga0075119_11008162	3300005931	Saline Lake	GDPTQNLVEDFNLVPVIADCTNTAHMPIQTFITQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK*
Ga0075119_11299881	3300005931	Saline Lake	DPTQNLVEDFNLVPVIADCTNTAHMPIQTFITQDLKGTDKQKVIGALAGGVINTYFSFAGEYNK*
Ga0075461_100773741	3300006637	Aqueous	EDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK*
Ga0098038_11963283	3300006735	Marine	LVEDFSLIPIVADCHNTVHLPLHTFVTREMQGTDRQKIIGALSGGIINTYFSYAGPIDK*
Ga0098037_13029231	3300006737	Marine	EGAHATWHFQFFTEQSGVYGDVVDPTLNLVEDFSLIPIVADCHNTVHFPLHTFVTKEMQGTDRQKIIGALTGGIINTYFSYAGPIDK*
Ga0098055_10752831	3300006793	Marine	TEQSGVYGEMIDPTANLLDDFSLVPVITDCHNTAHFPIQTFITKELQGTDRQKVVGALAGGIINTYFSYAGPIDK*
Ga0098060_11992482	3300006921	Marine	WHFQFFTEQSGVYGDVVDPTFNLVEDFSLIPIVADCHNTVHFPLHTFVTKEMQGTDRQKIIGALTGGIINTYFSYAGPIDK*
Ga0075468_101205293	3300007229	Aqueous	LVEDFSLIPIVANCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK*
Ga0099849_13622132	3300007539	Aqueous	TENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGHIDK*
Ga0075480_106015721	3300008012	Aqueous	FVDPTANLVEDFNLVPVVADCMNTAHLPIQTFVTEDMSGTDRQKIIGALAGGVLNTYFSYAGPTDK*
Ga0102963_13587322	3300009001	Pond Water	FTEQSGVYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK*
Ga0102957_12760131	3300009027	Pond Water	NLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSYAGHIDK
Ga0115549_10714291	3300009074	Pelagic Marine	HSTWHFQFFTEQSGVYGEVADPTENLVDDFNLVPIITECKNTAYFPVQTFVTRELQGSDEQKVIGALAGGIINTYFSYAGTIDK*
Ga0115549_11952471	3300009074	Pelagic Marine	EQSGVYGDFADPTASLVEDFSLIPIVANCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK*
Ga0115552_12859891	3300009077	Pelagic Marine	NLVEDFSLVPIITECTNTAHLPLHTFVTKEMQGTERQKIIGALSGGIINTYFSYAGPIDK
Ga0114995_108189112	3300009172	Marine	FQFFTEQTGVYGDISDPTQNLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK*
Ga0115551_15186382	3300009193	Pelagic Marine	VEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK*
Ga0115545_10677491	3300009433	Pelagic Marine	QFFTEQSGVYGDMVDPTENLVEDFGLVPVIAECTNTAHLPLHTFVTKEMQGTERQKIIGALSGGIINTYFSYAGPIDK*
Ga0115562_11511644	3300009434	Pelagic Marine	VEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSYAGHIDK*
Ga0115556_13412882	3300009437	Pelagic Marine	SGVYGDIMYPTENLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSYAGHIDK*
Ga0115563_11055564	3300009442	Pelagic Marine	QFFTEQSGVYGDISDPTENLVEDFNLVPVITDCTNTAHMPIQTFITQDLKGTDEQKVIGALAGGVINTYFSYAGHIDK*
Ga0115560_12625872	3300009447	Pelagic Marine	EQSGVYGDVTDPTENLVEDFNLIPIVADCTNTAHLPIHTFVTKEMQGTERQKIIGALAGGVINTYFSYAGPTDK*
Ga0115558_12224073	3300009449	Pelagic Marine	LMEDFSLVPVIADCTNTAHLPLHTFITKEMQGTERQKIIGALSGGIINTYFSYAGPIDK*
Ga0115571_14440572	3300009495	Pelagic Marine	YGDIMDPTENLVEDFNLVPMNTECANTAHFPLQTFVTRELQGTDEQKVIGALAGGVINTYFSYAGPIDK*
Ga0115569_101184921	3300009497	Pelagic Marine	NLVEDFSLIPIVADCTNTAHLPIHTFVTMEMQGTDRQKVIGALAGGVINTYFSYAGPIDK
Ga0115564_103620782	3300009505	Pelagic Marine	YYEGQHSTWHFQFFTEQARVYGDMVDPTENLMEDFSLVPVIAECTNTAHLPLHTFITKEMQGTERQKIIGALSGGIINTYFSYAGPIDK*
Ga0115572_106824031	3300009507	Pelagic Marine	IMYPTENLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGAMAGGVINTYFSYAGHIDK*
Ga0115000_103817623	3300009705	Marine	FFTEQTGVYGDIGYPTQNLVEDFNLVPVITDCTNTAHMPIQTFVTQNLKGTDEQKVIGALAGGVINTYFSFAGEYNK*
Ga0098059_10316621	3300010153	Marine	TWHFQFFTEQSGVYGEMIDPTANLLDDFSLVPVITDCHNTAHFPVQTFITKELQGTDRQKVIGALAGGIINTYFSYAGPIDK*
Ga0129324_102817651	3300010368	Freshwater To Marine Saline Gradient	TASLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK*
Ga0133547_108219411	3300010883	Marine	NLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK*
Ga0137784_10369101	3300010936	Marine	GDTLDPTGSLLDDFSLVPVITDCHNTAHFPVQTFITKELQGTDRQKVIGALAGGIINTYFSYAGSIDK*
Ga0163110_110632612	3300012928	Surface Seawater	TGVYGDVSDPTGSLLDDFSLVPVVGDCHNTAHFPVQTFVTKELQGTDRQKVIGALAGGIINTYFSYAGPIDK*
Ga0116834_10881801	3300013188	Marine	LIPVMAQCHNTAHFPVQTFVTKELQGTDRQKVIGALAGGIINTYFSYAGPIDK*
Ga0181377_10396641	3300017706	Marine	EGPHSTWHFQFFSEQSGVYGDIVDPTENLVEDFSLVPVVADCTNTAHMPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0181377_10631421	3300017706	Marine	TEQSGVYGGMLDPTEYLSDDFNLVPVVADCHNTAHLPIQTFVTRDLQGSDRQKVIGALAGGVINTYFSYAGPIDK
Ga0181403_11133422	3300017710	Seawater	WHFQFFTEQSGVYGDLMEPTENLVEDFSLVPIITECTNTAHLPLHTFVTKEMQGTERQKIIGALSGGIINTYFSYAGPTDK
Ga0181390_11631521	3300017719	Seawater	NLVPVITDCMNSAHFPIHTFVTRNLQGTDEQKVIAALSGGIINTYFSYAGPVDK
Ga0181399_11244211	3300017742	Seawater	TTWHFQFFTEQSGVYGDFVDPTASLVEDFSLIPIVADCMNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPTDK
Ga0181427_10501224	3300017745	Seawater	DDFSLIPVMTQCYNSAHFPIQTFVTKEVQGTDRQKIIGALSGGIINTYFSYAGPTDK
Ga0181389_11597012	3300017746	Seawater	VDPTASLVEDFSLIPIVADCMNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPTDK
Ga0181392_12323681	3300017749	Seawater	EFQFFTEQAGVYGDMIDPTENLMEDFSLVPVIADCTNTAHLPLHTFVTKEMQGTERQKIIGALSGGIINTYFSYAGPIDK
Ga0181413_10283715	3300017765	Seawater	GDEIDPISYLVEDFNLVPMLPECTNTANFPIHTFLTKDLQGSDEQKVIAALSGGIINTYFSYAGPVDK
Ga0181406_11793941	3300017767	Seawater	FQFFTEQSGVYGEIQDPTENLVEDFSLVPIIADCTNTAHLPLYTFVTKEMQGTERQKIIGALSGGIINTYFSYAGPIDK
Ga0181423_13637152	3300017781	Seawater	DFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPTDK
Ga0181552_102268324	3300017824	Salt Marsh	TDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPTDK
Ga0181553_106754191	3300018416	Salt Marsh	GDIYDPTANLTQDFNLVPVNPDCSNTAHLPISTFITENLQGTDEQKVVNALSGSIINTYFSYAGPVDK
Ga0181558_101588481	3300018417	Salt Marsh	AHSTWHFQFFTEQSGVYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPTDK
Ga0181563_100632356	3300018420	Salt Marsh	HFQFFTEQSGVYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPTDK
Ga0188859_10015951	3300019098	Freshwater Lake	AEQSGVYGDISDPTENLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKWTDKQKVIGALAGGVINTYFSYAGHIDK
Ga0181555_10760565	3300020051	Salt Marsh	VYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMTGTDRQKIIGALAGGVINTYFSYAGPIDK
Ga0181602_101235824	3300020173	Salt Marsh	AHSTWHFQFFTEQSGVYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMAGTDRQKIIGALAGGVINTYFSYAGPIDK
Ga0181596_103602332	3300020177	Salt Marsh	YGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0181599_13250561	3300020178	Salt Marsh	EQSGVYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0211707_10283571	3300020246	Marine	VSDPTGSLLDDFSLVPVITDCHNTAHFPVQTFVTKELQGTDRQKVIGALAGGIINTYFSYAGPIDK
Ga0211652_100707734	3300020379	Marine	LVEDFSLVPVVADCSNTAHLPIHTFVTKEMQGTDRQKIIGALSGGIINTYFSYAGPTDK
Ga0211618_102945301	3300020393	Marine	EQPDVFGDQTDPTENLVEDFNLVPILTECSNTAHFPIQTFVTKDLTGTNQQKVISALAGGVKNTYFSYAGTVDK
Ga0211659_103286702	3300020404	Marine	EGQHTTWHFQFFTEQGGVYGDVRDPTESLVEDFSLVPVVADCTNTAHLPIQTFVTKEMQGTERQKIIGALSGGVINTYFSYAGPIDK
Ga0211521_104697011	3300020428	Marine	GVYGDILDPTENLVEDFNLIPVLTDCTNTAHFPIQTFITREYAGTDEQRVINALSGTILNTYFSYAGPIDK
Ga0211518_101860881	3300020440	Marine	LIPIVADCTNTANLPVQTFVTREMQGNERQKIIGALAGGIINTYFSYSGPIDK
Ga0211548_100912255	3300020454	Marine	KHSTWHFQFFTEQREVYGDDIDPTNNLVDDFNLVPVITDCNNTAHFPIHTFITKNLQGSDEQKVIAALSGGIINTYFSYSGPVDK
Ga0211535_100603565	3300020461	Marine	YGEIEDPTENLVDDFSLVPIIADCTNTAHLPLYTFVTKEMQGTERQKIIGALSGGIINTYFSYAGPIDK
Ga0211577_103852111	3300020469	Marine	QFFTEQAGVYGDFVDPTQNLVDDFGLIPIMAECHNTANFPVQTFVTKELQGTDSQKVIGALAGGIINTYFSYAGTIDK
Ga0211543_102797991	3300020470	Marine	DPTVNLVEDFSLIPIMTQCHNTAHFPVQTFVTKDLQGTDRQKVIGALAGGIINTYFSYAGPIDK
Ga0211614_104123961	3300020471	Marine	TEQAGVYGDATDPTGSLLDDFSLVPVVGDCHNTAHFPVQTFVTKELQGTDRQKIIGALAGGIINTYFSYAGSIDK
Ga0181598_12600451	3300020810	Salt Marsh	GAHSTWHFQFFTEQSGVYGDVTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMAGTDRQKVIGALAGGVINTYFSYAGPIDK
Ga0213865_102436884	3300021373	Seawater	VEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0196891_10869532	3300022183	Aqueous	FSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPTDK
Ga0222711_10061125	3300022837	Saline Water	EGQHNTWHFQFFTEQTGVYGDIGDPTENLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQRVIGALAGGVINTYFSFAGEYNK
Ga0222632_10548851	3300022842	Saline Water	DPTQNLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK
Ga0222631_10358023	3300022843	Saline Water	VEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK
Ga0222691_10263831	3300022851	Saline Water	VEDFNLVPVIADCTNTAHMPIQTFITQDLKGTDKQKVIGALAGGVINTYFSFAGEYNK
Ga0255780_102956891	3300022935	Salt Marsh	FFTEQSGVYGDFADPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK
Ga0255763_10330066	3300023273	Salt Marsh	TENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMAGTDRQKVIGALAGGVINTYFSYAGPIDK
Ga0222670_10640352	3300023294	Saline Water	EDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK
Ga0222664_10445083	3300023296	Saline Water	PTENLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK
Ga0222664_10510771	3300023296	Saline Water	GDIGDPTENLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQRVIGALAGGVINTYFSFAGEYNK
Ga0232122_11555301	3300023709	Salt Marsh	SQLQFFTEQAGVYGDFTDPTASLVEDFSLIPIVADCTNTAHLPIHTFVTKEMTGTDRQKIIGALAGGVINTYFSYAGPIDK
Ga0208792_10178521	3300025085	Marine	PTASLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPTDK
Ga0208669_10166341	3300025099	Marine	AEQSSVYGDMVDPTDNLVEDFSLVPIITECTNTAHLPLHTFVTKEMQGSERQKIIGALSGGIINTYFSYAGPTDK
Ga0209535_10471531	3300025120	Marine	PISYLVEDFNLVPMLTECTNTANFPIHTFLTKDLQGSDEQKVIAALSGGIINTYFSYAGPVDK
Ga0208299_12393742	3300025133	Marine	YEGAHTTWHFQFFTEQSGVYGEMIDPTANLLDDFSLVPVITDCHNTAHFPVQTFITKELQGTDRQKVIGALAGGIINTYFSYAGPIDK
Ga0209634_12346742	3300025138	Marine	YEGQHSTWHFQFFTEQSGVYGDVADPTENLVEDFSLVPVIAECMNTAHLPVHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0209645_10328835	3300025151	Marine	TWHFQFFTEQSGVYGDIADPTISLVDDFSLIPIVADCTNTAHLPIQTFVTKEMHGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0209337_13116551	3300025168	Marine	TWHFQFFTEQSGVYGDVADPTENLVEDFSLVPVIAECMNTAHLPVHTFVTKEMQGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0209195_11335991	3300025590	Pelagic Marine	PTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPIDK
Ga0209193_11277612	3300025816	Pelagic Marine	EQSGVYGDFTDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMQGTERQKIIGALAGGVINTYFSYAGPTDK
Ga0209600_11204633	3300025821	Pelagic Marine	EQSGVYGDVADPTENLVEDFSLIPIVADCTNTAHLPIHTFVTMEMQGTDRQKVIGALAGGVINTYFSYAGPIDK
Ga0209119_12245641	3300025860	Pelagic Marine	DPTASLVEDFSLIPVVADCMNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGTIDK
Ga0209308_104091571	3300025869	Pelagic Marine	TDPTENLVEDFSLIPIVADCTNTAHLPIHTFVTKEMAGTDRQKIIGALAGGIINTYFSYAGPIDK
Ga0209932_10729151	3300026183	Pond Water	LIPIVADCTNTAHLPIHTFVTKEMTGTDRQKIIGALAGGVINTYFSYAGPIDK
Ga0228674_12607221	3300028008	Seawater	LVEDFSLIPIVADCMNTAHLPIHTFVTKEMQGTDRQKIIGALAGGVINTYFSYAGPTDK
Ga0308010_10532701	3300031510	Marine	FFTEQVGIYGDLEDPTQNLQEDFNLVPIITDCMNTAHFPVQTFITKDLQGSDEQKVINALSGSIINTYFSYAGPVDK
Ga0307488_101043785	3300031519	Sackhole Brine	YGDISDPTQNLVEDFNLVPVITDCTNTAHMPIQTFVTQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK
Ga0307488_108055072	3300031519	Sackhole Brine	HNTWHFQFFTEQTGVYGDIGDPTQNLVEDFNLVPVITDCTNTAHMPIQTFITQDLKGTDEQKVIGALAGGVINTYFSFAGEYNK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093795

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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