Metagenome / Metatranscriptome Family F093912

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093912
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	97 residues
Representative Sequence	FFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKHQSYIFKKLKRKIFAKLVISYLYKAHNGCRLKKKKRIKIRTRTRKL
Number of Associated Samples	93
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	73.58 %
% of genes from short scaffolds (< 2000 bps)	82.08 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Eukaryota (98.113 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (20.755 % of family members)
Environment Ontology (ENVO)	Unclassified (33.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (69.811 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.20% β-sheet: 0.00% Coil/Unstructured: 40.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00146	NADHdh	4.72
PF03947	Ribosomal_L2_C	3.77
PF00902	TatC	2.83
PF00181	Ribosomal_L2	2.83
PF00411	Ribosomal_S11	1.89
PF00164	Ribosom_S12_S23	0.94
PF00673	Ribosomal_L5_C	0.94
PF01479	S4	0.94
PF00347	Ribosomal_L6	0.94
PF00361	Proton_antipo_M	0.94
PF00115	COX1	0.94
PF00203	Ribosomal_S19	0.94
PF06455	NADH5_C	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0090	Ribosomal protein L2	Translation, ribosomal structure and biogenesis [J]	6.60
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	4.72
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	4.72
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	2.83
COG0100	Ribosomal protein S11	Translation, ribosomal structure and biogenesis [J]	1.89
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.89
COG0094	Ribosomal protein L5	Translation, ribosomal structure and biogenesis [J]	0.94
COG0097	Ribosomal protein L6P/L9E	Translation, ribosomal structure and biogenesis [J]	0.94
COG0185	Ribosomal protein S19	Translation, ribosomal structure and biogenesis [J]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	98.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	96.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	96.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	96.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	96.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	92.45 %
Bacillariophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	91.51 %
Bacillariophycidae	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	91.51 %
Naviculales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	91.51 %
Naviculaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	91.51 %
Navicula	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Navicula	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	91.51 %
Navicula ramosissima	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Navicula → Navicula ramosissima	0.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003549\|Ga0008452J51689_111917	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	751	Open in IMG/M
3300003554\|Ga0008451J51688_130443	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	543	Open in IMG/M
3300003554\|Ga0008451J51688_135089	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	725	Open in IMG/M
3300003554\|Ga0008451J51688_135090	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	710	Open in IMG/M
3300003860\|Ga0031658_1000089	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	13766	Open in IMG/M
3300004765\|Ga0007745_1257751	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	659	Open in IMG/M
3300005418\|Ga0068881_1563447	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	550	Open in IMG/M
3300005421\|Ga0068882_1620140	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	588	Open in IMG/M
3300005565\|Ga0068885_1731436	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	798	Open in IMG/M
3300005940\|Ga0073913_10053433	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	646	Open in IMG/M
3300006014\|Ga0073919_1020050	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	622	Open in IMG/M
3300006373\|Ga0075483_1271752	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	524	Open in IMG/M
3300006383\|Ga0075504_1410309	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	783	Open in IMG/M
3300006394\|Ga0075492_1045798	All Organisms → cellular organisms → Eukaryota	4363	Open in IMG/M
3300006394\|Ga0075492_1070613	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	12890	Open in IMG/M
3300006396\|Ga0075493_1050136	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	4766	Open in IMG/M
3300006396\|Ga0075493_1074166	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	3645	Open in IMG/M
3300006396\|Ga0075493_1556200	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	918	Open in IMG/M
3300006397\|Ga0075488_1598656	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	506	Open in IMG/M
3300006484\|Ga0070744_10129912	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	725	Open in IMG/M
3300006571\|Ga0075505_1006721	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	569	Open in IMG/M
3300006803\|Ga0075467_10115953	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1576	Open in IMG/M
3300006874\|Ga0075475_10243487	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	757	Open in IMG/M
3300007230\|Ga0075179_1077213	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	2820	Open in IMG/M
3300007232\|Ga0075183_10039274	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	867	Open in IMG/M
3300007241\|Ga0075170_1540366	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	622	Open in IMG/M
3300007244\|Ga0075167_11003368	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	973	Open in IMG/M
3300007253\|Ga0075182_10129557	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1755	Open in IMG/M
3300007534\|Ga0102690_1587277	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	548	Open in IMG/M
3300007551\|Ga0102881_1132540	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	689	Open in IMG/M
3300007559\|Ga0102828_1038970	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1084	Open in IMG/M
3300007655\|Ga0102825_1053602	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	821	Open in IMG/M
3300007861\|Ga0105736_1006568	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1845	Open in IMG/M
3300007981\|Ga0102904_1015161	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1698	Open in IMG/M
3300007981\|Ga0102904_1045058	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1003	Open in IMG/M
3300008116\|Ga0114350_1188331	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	522	Open in IMG/M
3300008258\|Ga0114840_1073363	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	519	Open in IMG/M
3300008995\|Ga0102888_1003442	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	3065	Open in IMG/M
3300008995\|Ga0102888_1089689	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	618	Open in IMG/M
3300008999\|Ga0102816_1123889	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	795	Open in IMG/M
3300009002\|Ga0102810_1170879	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	669	Open in IMG/M
3300009033\|Ga0102956_1315271	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	542	Open in IMG/M
3300009327\|Ga0103843_100052	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	4447	Open in IMG/M
3300009432\|Ga0115005_11138505	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	634	Open in IMG/M
3300009450\|Ga0127391_1000345	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	9688	Open in IMG/M
3300009543\|Ga0115099_10280270	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	514	Open in IMG/M
3300009544\|Ga0115006_10075136	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	2974	Open in IMG/M
3300009592\|Ga0115101_1492673	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	973	Open in IMG/M
3300009592\|Ga0115101_1517688	All Organisms → cellular organisms → Bacteria → Proteobacteria	4286	Open in IMG/M
3300009599\|Ga0115103_1577160	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	537	Open in IMG/M
3300009599\|Ga0115103_1577715	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1174	Open in IMG/M
3300009599\|Ga0115103_1878211	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	993	Open in IMG/M
3300009606\|Ga0115102_10628899	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	507	Open in IMG/M
3300010993\|Ga0139329_107831	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	844	Open in IMG/M
3300012413\|Ga0138258_1530190	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	513	Open in IMG/M
3300012416\|Ga0138259_1376490	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	618	Open in IMG/M
3300012471\|Ga0129334_1104074	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	554	Open in IMG/M
3300012522\|Ga0129326_1206786	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1330	Open in IMG/M
3300012722\|Ga0157630_1278902	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	594	Open in IMG/M
3300012725\|Ga0157610_1031778	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	597	Open in IMG/M
3300012962\|Ga0129335_1194506	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	753	Open in IMG/M
3300012965\|Ga0129346_1112889	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	521	Open in IMG/M
3300012966\|Ga0129341_1366145	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	570	Open in IMG/M
3300012968\|Ga0129337_1401302	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	728	Open in IMG/M
3300013108\|Ga0171648_135855	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300013791\|Ga0119889_1000011	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	32526	Open in IMG/M
3300018659\|Ga0193067_1004569	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → Naviculales → Naviculaceae → Navicula → Navicula ramosissima	1562	Open in IMG/M
3300018965\|Ga0193562_10184887	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	585	Open in IMG/M
3300018982\|Ga0192947_10034316	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1494	Open in IMG/M
3300019000\|Ga0192953_10148430	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	588	Open in IMG/M
3300019021\|Ga0192982_10107930	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	937	Open in IMG/M
3300019022\|Ga0192951_10296660	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	610	Open in IMG/M
3300019191\|Ga0180035_1053573	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	956	Open in IMG/M
3300019191\|Ga0180035_1067448	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	538	Open in IMG/M
3300019201\|Ga0180032_1035731	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	5400	Open in IMG/M
3300019697\|Ga0194007_1006842	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	950	Open in IMG/M
3300019738\|Ga0193994_1034549	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	667	Open in IMG/M
3300019747\|Ga0193978_1068780	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	542	Open in IMG/M
3300019750\|Ga0194000_1037552	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	693	Open in IMG/M
3300020555\|Ga0208358_1055857	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	574	Open in IMG/M
3300021336\|Ga0210307_1081188	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	572	Open in IMG/M
3300021336\|Ga0210307_1335356	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	11711	Open in IMG/M
3300021964\|Ga0222719_10042167	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	3519	Open in IMG/M
3300022202\|Ga0224498_10156897	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	669	Open in IMG/M
3300022367\|Ga0210312_107021	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	843	Open in IMG/M
3300022369\|Ga0210310_1014000	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	799	Open in IMG/M
3300022374\|Ga0210311_1028061	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	681	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10203806	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	827	Open in IMG/M
3300024346\|Ga0244775_10545452	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	944	Open in IMG/M
3300024346\|Ga0244775_11565526	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	502	Open in IMG/M
3300024546\|Ga0256356_1028192	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1029	Open in IMG/M
3300025751\|Ga0208150_1060921	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1273	Open in IMG/M
3300025752\|Ga0207912_100338	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	696	Open in IMG/M
3300025767\|Ga0209137_1151503	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	842	Open in IMG/M
3300025887\|Ga0208544_10000265	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	42730	Open in IMG/M
3300027189\|Ga0208675_1020126	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	818	Open in IMG/M
3300027226\|Ga0208309_1009468	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1219	Open in IMG/M
3300027245\|Ga0208445_1025244	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	614	Open in IMG/M
3300027249\|Ga0208175_1003012	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	2025	Open in IMG/M
3300027506\|Ga0208973_1131098	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	533	Open in IMG/M
3300027786\|Ga0209812_10084904	All Organisms → cellular organisms → Eukaryota	1531	Open in IMG/M
3300027836\|Ga0209230_10552685	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	649	Open in IMG/M
3300027849\|Ga0209712_10333161	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	859	Open in IMG/M
3300027899\|Ga0209668_10000084	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	37104	Open in IMG/M
3300028329\|Ga0210315_1000644	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	2937	Open in IMG/M
3300034109\|Ga0335051_0142899	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1224	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.40%
Engineered	Engineered	6.60%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.57%
Wastewater	Engineered → Wastewater	6.60%
Terrestrial	Environmental → Terrestrial	2.83%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	69.81%
Freshwater	Environmental → Aquatic → Freshwater	19.81%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	5.66%
Soil	Environmental → Terrestrial → Soil	2.83%
Unclassified	Environmental → Aquatic → Unclassified	0.94%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.94%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	22.64%
Coastal	Environmental → Aquatic → Marine → Coastal	19.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.92%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.49%
Oceanic	Environmental → Aquatic → Marine → Oceanic	7.55%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	5.66%
Lake	Environmental → Aquatic → Freshwater → Lake	4.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.77%
Sand	Environmental → Terrestrial → Soil → Sand	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.94%
River	Environmental → Aquatic → Freshwater → River	0.94%
Strait	Environmental → Aquatic → Marine → Strait	0.94%
Sediment	Environmental → Aquatic → Marine → Sediment	0.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	20.75%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	19.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.92%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	7.55%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	5.66%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	5.66%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.77%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.89%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.89%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	20.75%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	17.92%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.26%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	5.66%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	4.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	3.77%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.83%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.83%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.89%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.89%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.89%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	1.89%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.94%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.94%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.94%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.94%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.94%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.94%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.94%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.94%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Wastewater	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003549	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_08_M0_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003554	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_04_M0_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300004765	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005418	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel3S_1000h metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005421	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005565	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006014	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_25-Nov-14	Environmental	Open in IMG/M
3300006373	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006383	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006394	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006396	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006397	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006571	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007230	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007232	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 A2 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007241	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007244	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 6/11/14 C2 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007253	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 A1 RNA (Eukaryote Community Metatranscriptome)	Engineered	Open in IMG/M
3300007534	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel4S_1600h metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300007981	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008995	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-3	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009002	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573	Environmental	Open in IMG/M
3300009033	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D2_MG	Environmental	Open in IMG/M
3300009327	Microbial communities of water from the North Atlantic ocean - ACM30	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009543	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010993	ECM15MPS05_Bassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method B (2X150bp)	Environmental	Open in IMG/M
3300012413	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012416	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA9.A_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012471	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012522	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012722	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES163 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012725	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES137 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012962	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012965	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012966	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013108	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 103m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300013791	Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - DC_EW_meta	Engineered	Open in IMG/M
3300018659	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_142 - TARA_N000003102 (ERX1782249-ERR1712111)	Environmental	Open in IMG/M
3300018965	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_149 - TARA_N000002141	Environmental	Open in IMG/M
3300018982	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001384 (ERX1782271-ERR1711935)	Environmental	Open in IMG/M
3300019000	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001394 (ERX1782320-ERR1712129)	Environmental	Open in IMG/M
3300019021	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001034 (ERX1782268-ERR1711957)	Environmental	Open in IMG/M
3300019022	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001390 (ERX1782474-ERR1712194)	Environmental	Open in IMG/M
3300019191	Estuarine microbial communities from the Columbia River estuary - R.880 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019201	Estuarine microbial communities from the Columbia River estuary - R6.10AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019697	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_3-4_MG	Environmental	Open in IMG/M
3300019738	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_0-1_MG	Environmental	Open in IMG/M
3300019747	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_5-6_MG	Environmental	Open in IMG/M
3300019750	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States - FLT_6-7_MG	Environmental	Open in IMG/M
3300020555	Freshwater microbial communities from Lake Mendota, WI - 10AUG2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021336	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022202	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_21	Environmental	Open in IMG/M
3300022367	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1161 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022369	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States ? R1119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022374	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1166 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024062 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024546	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025752	Marine microbial communities from the Deep Atlantic Ocean - MMD3.0 (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025887	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027189	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579 (SPAdes)	Environmental	Open in IMG/M
3300027226	Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3 (SPAdes)	Environmental	Open in IMG/M
3300027245	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-3 (SPAdes)	Environmental	Open in IMG/M
3300027249	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-3 (SPAdes)	Environmental	Open in IMG/M
3300027506	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)	Environmental	Open in IMG/M
3300027786	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 7/17/14 B DNA (SPAdes)	Engineered	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300028329	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States ? R1276 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008452J51689_1119174	3300003549	Seawater	FFYSAGMFSLQKRQKTRQPKAIITILRALLSKSKSFKIKPVAVHFNNLFFNHQSYIFKKLKQKVFIKLVTSYSYRPHNGCRLKKKKRIKIRTRTRKL*
Ga0008451J51688_1304433	3300003554	Seawater	LINVNSIKGNPKFFYSAGMFSLQKNQKTRQPKAIITILRALLAKSKIFKVKPVAVHFNNVFFNHQSYIFKKLKQKIFMKLVTSYNFRSHNGCRLKKKKRIKIRTRTRKL*
Ga0008451J51688_1350894	3300003554	Seawater	VNVNNIKGNPKFFYSAGMLNLQKRQKIRQPKAAITLLRTLLLRSKPLKQKPVAVHFSNLFFNHQSYVFKKLSKKIFAKLAISNTSRPHNGCRLKKKKRIKIRTRARKL*
Ga0008451J51688_1350901	3300003554	Seawater	IKGNPKFFYSAGMLNLQKRQKIRQPKAAITLLRTLLLRSKPLKQKPVAVHFSNLFFNHQSYVFKKLSKKIFAKLAISNTSRPHNGCRLKKKKRIKIRTRARKL*
Ga0031658_10000891	3300003860	Freshwater Lake Sediment	TQKTRQPKAIITILRALLLKSKAFKTKPAALHFNNLFFNHQSYIFKRLKRKVFAKLITSYLYRPHNGCRLRKKRRIKIRTRTKKL*
Ga0007745_12577514	3300004765	Freshwater Lake	AGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKHQSYIFKKLKRKIFAKLVISYLYKAHNGCRLKKKKRIKIRTRTRKL*
Ga0068881_15634473	3300005418	Freshwater Lake	KKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFNHQSYIFKKLKRKIFAKLVISYLYKAHNGCRLKKKKRIKIRTRTRKL*
Ga0068882_16201403	3300005421	Freshwater Lake	MFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKHQSYVFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKL*
Ga0068885_17314364	3300005565	Freshwater Lake	YSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKHQSYIFKKLKRKIFAKLVISYLYKAHNGCRLKKKKRIKIRTRTRKL*
Ga0073913_100534331	3300005940	Sand	TIINVNTIKGNPKFFYSAGMFKLQKTQKTRQPKAIITILRALLLKSKFFKTKPTALHFNNLFFNHQSYIFKRLKRKVFAKLITSYLYRPHNGCRLRKKKRIKVRTKTRKL*
Ga0073919_10200501	3300006014	Sand	INVNTIKGNPKFFYSAGMFKLQKTQKTRQPKAIITILRALLLKSKFFKTKPTALHFNNLFFNHQSYIFKRLKRKVFAKLITSYLYRPHNGCRLRKKKRIKVRTKTRKL*
Ga0075483_12717523	3300006373	Aqueous	MFNLQKKQKIRQPKAIITILRALLLKLKIYKTKPVAVHFNNLYFSYQSYIFKKLKQKTFTKLVVTYNYSSHNGCRLKKKKRIKIRTRSK*
Ga0075504_14103091	3300006383	Aqueous	KFFYSAGMFNLQKKQKIRQPKAIIIILRALLLKSKIFRTKPVAVHFNNLFFNYQSHIFKKLKRKVFTKLVISYIFGSHNGCRLKKKKRMKIRTRTRKL*
Ga0075492_10457981	3300006394	Aqueous	KTQKVRQPKAIITILKSLLVKIKVFRTKPVALHFNNLFFNHQSYIYKKLKRKIFIKLVTSYNYHPHNGCRLKKKKRIKIRTRTKKL*
Ga0075492_107061329	3300006394	Aqueous	LPTNTLINVNDIKGNPKFFYSAGMFKLQKRQKIRQPKAIFTILRALLLKSKIFKTKPVAIHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLKKKKRIKIRTRSKRA*
Ga0075493_10501361	3300006396	Aqueous	KKQKTRQPKAIFTILRALLLKSKIFKTKPVAVHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLRKKKRIKIRTRAK*
Ga0075493_10741661	3300006396	Aqueous	KTQKVRQPKAIITILKSLLVKIKVFRTKRRFTFQQFVFQPSMYIYKKLKRKIFIKLVTSYNYHPHNGCRLKKKKRIKIRTRTKKL*
Ga0075493_15562001	3300006396	Aqueous	PKFFYSAGMFNLQKTQKIRQPKAIITILRALLTKSKLFKTKPVAVHFKNLFFNHQSYVFKKLKQKVFTKLIIGYIYRSHNGCRLKKKKRIKIRTRTKKLLKK*
Ga0075488_15986563	3300006397	Aqueous	STNTLVNVNNINGNPKLFYSAGMLNLQKKQKIRQPKAIITILRALLLKLKIYKTKPVAVHFNNLYFSYQSYIFKKLKQKTFTKLVVTYNCSSHNGCRLKKKKTN*
Ga0070744_101299124	3300006484	Estuarine	VNNVNGNPKLFFSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFNHQSYIFKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL*
Ga0075505_10067212	3300006571	Aqueous	LLTTNTLINVNTIKGNPRFFYSAGMCNLQKSQKTRQPKAIITILRVLLIKTKLFKSKPVAIHFNNLFFNQQSYILKKLKKKIFTKLVASYTYYSHNGCRLKKKKR
Ga0075467_101159531	3300006803	Aqueous	MFNLQKTQKIRQPKAIITILRALLTKSKLFKTKPVAVHFKNLFFNHQSYVFKKLKQKVFTKLIIGYIYRSHNGCRLKKKKRIKIRTRTKKLLKK*
Ga0075475_102434874	3300006874	Aqueous	NPRFFYSAGMLSLQKKQKTRQPKAIITILRALLLKSKLYKTKPVAVHFNNLFFNHQSYIFKKLKQKIFTKLVKSYIYRPHNGCRLRKKKRIKIRTRTKKL*
Ga0075179_10772138	3300007230	Wastewater Effluent	MFNFQKKQKIKQPKAIITILKALLLKFKTYKFKPVALHFNNLFFKQQSYILKRLKQKVFIKLIMSYNYYPHNGCRLKKKKRIKIRTRTKKL*
Ga0075183_100392741	3300007232	Wastewater Effluent	QKKQKIKQPKAIITILKALLLKFKIYKIKPVALHFNNLFFKQQSYILKRLKQKVFIKLIMSYNYYPHNGCRLKKKKRIKIRTRTKKLSKE*
Ga0075170_15403661	3300007241	Wastewater Effluent	NFQKKQKIKQPKAIITILKALLLKFKTYKFKPVALHFNNLFFKQQSYILKRLKQKVFIKLIMSYNYYPHNGCRLKKKKRIKIRTRTKKL*
Ga0075167_110033681	3300007244	Wastewater Effluent	FFSAGMFNFQKKQKIKQPKAIITILKALLLKFKIYKIKPVALHFNNLFFKQQSYILKRLKQKVFIKLIMSYNYYPHNGCRLKKKKRIKIRTRTKKLSKE*
Ga0075182_101295578	3300007253	Wastewater Effluent	QKIKQPKAIITILKALLSKFKTYKFKPVGLHFNNLFFKQQSYILKRLKQKVFLKLIMSYNYYPHNGCRLKKKKRIKIRTRTKKLSKE*
Ga0102690_15872773	3300007534	Freshwater Lake	QKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFNHQSYIFKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL*
Ga0102881_11325401	3300007551	Estuarine	ILRALLLKSKVFKTKPVAMHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLKKKKRIKIRTRSKRA*
Ga0102828_10389701	3300007559	Estuarine	FFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKHQSYIFKKLKRKIFAKLVISYLYKAHNGCRLKKKKRIKIRTRTRKL*
Ga0102825_10536024	3300007655	Estuarine	QKTRQPKAIITILRALLLKSKFFKTKPAAVHFNNLFFKHQSSIFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKL*
Ga0105736_10065687	3300007861	Estuary Water	PKFFYSAGMFNLQKTQKVRQPKAIIIILKALLVKIKAFRTKPVALHFNNLFFNHQSYIYKKLNQKIFIKLVTSYNYHPHNGCRLKKKKRIKIRTRTKKL*
Ga0102904_10151612	3300007981	Estuarine	LPTNTLINVNDIKGNPKFFYSAGMFKLQKRQKIRQPKAIFTILRALLLKSKVFKTKPVAIHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLKKKKRIKIRTRSKRA*
Ga0102904_10450581	3300007981	Estuarine	AGMFNLQKKQKIRQPKAIIIILRALLLKSKIFRTKPVAVHFNNLFFNYQSNIFKKLKRKVFTKLVISYIFGSHNGCRLKKKKRMKIRTRTRKL*
Ga0114350_11883311	3300008116	Freshwater, Plankton	KFFYSAGMFKLQKTQKTRQPKAIITILRALLLKSKFFKTKPTALHFNNLFFNHQSYIFKRLKRKVFAKLITSYLYRPHNGCRLRKKKRIKVRTKTRKL*
Ga0114840_10733631	3300008258	Freshwater, Plankton	FYSAGMFKLQKTQKTRQPKAIITILRALLLKSKFFKTKPTALHFNNLFFNHQSYIFKRLKRKVFAKLITSYLYRPHNGCRLRKKKRIKVRTKTRKL*
Ga0102888_10034429	3300008995	Estuarine	VNSIKGDPKIFYSAGMFKLQKKQKTRQPKAIFTILRALLLKSKNFKTKPVAVHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLRKKKRIKIRTRAK*
Ga0102888_10896891	3300008995	Estuarine	LPTNTLINVNDIKGNPKFFYSAGMFKLQKRQKIRQPKAIFTILRALLLKSKVFKTKPVAIHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLRKKKRIKIRT
Ga0102816_11238894	3300008999	Estuarine	VNNVNGNPKFFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKYQSYILKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKLWEK*
Ga0102810_11708792	3300009002	Estuarine	VINVNNVNGNPKFFYSAVMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKYQSYILKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL*
Ga0102956_13152713	3300009033	Soil	FFYSAGMFNLQKKQKIRQPKAIITILRALLLKAKIFKTKPVAVHFNNLFFNHQSYIFKKLKQKIFTKLIISYIYRSHNGCRLKKKKRIKIRTRTR*
Ga0103843_10005212	3300009327	River Water	MLSLQKKQKTRQPKAIITILRALLLKSKLYKTKPVAVHFNNLFFNHQSYIFKKLKQKIFTKLVKSYIYRPHNGCRLRKKKRIKIRTRTKKL*
Ga0115005_111385054	3300009432	Marine	NPKFFYSAGMFNLQKKQKIRQPKATILILRALLLKSKVFKTKPVAVHFNNLFFNYQSYIFKKLKQKIFTKLVMSYIFHSHNGCRLKKKKRIKIRTRTRKL*
Ga0127391_100034529	3300009450	Meromictic Pond	MFNLQKKQKTKQPKAAITMLRALLIKFKICKIKPVVLHFNNLFYNHQSYILKRLKQKLFIKLIMSYNSLSHNGCRLKKKKRIKIRTRTRKL*
Ga0115099_102802701	3300009543	Marine	MFKLQKTQKVRQPKATITILRAFLTKAKLFKTKPVAIHFKNFFFNHQSYIFKRLKQKVFAKLMTGYICRSHN
Ga0115006_100751361	3300009544	Marine	MFNLQKTQKVRQPKAIITILRAFLTKSKLFKTKPVAVHFKNLFFNHQSYIFKKLKQKVFAKLMTGYISRSHNGCRLRKKKRIKIRTRTKKLLKK*
Ga0115101_14926733	3300009592	Marine	LNNIKGQPRFFYSAGMFQLQNKQKTRQPKAIITILQTLLLKSKIFKTKPVAIHFNKLFFNYQSYVFKKLKQKIFIKLVLNRNYQSHNGCRLKKKKRLKIRTYAR*
Ga0115101_15176882	3300009592	Marine	MFNLQKTQKVRQPKAIITILRAFLTKSKLFKTKPVAVHFKNLFFNHQSYIFKKLKQKVFAKLMTGYISRPHNGCRLRKKKTN*
Ga0115103_15771602	3300009599	Marine	VNSIKGNPKFFYSAGMFNLQKTQKIRQPKAIITILKALLVKMKIFRAKPVALHFNNLFFNYQSYIYKKLKRKVFIKLVTSYNYHPHNGCRLKKKKRIKIRTRTKKL*
Ga0115103_15777151	3300009599	Marine	MFNLQKTQKVRQPKAIITILRAFLTKSKLFKTKPVAVHFKNLFFNHQSYIFKKLKQKVFAKLMTGYISRPHNGCRLRKKKRIKIRTRTKKLLKK*
Ga0115103_18782115	3300009599	Marine	AGMFKLQKRQKIRQPKAIFTILRALLLKSKIFKTKPVAIHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLKKKKRIKIRTRSKRA*
Ga0115102_106288992	3300009606	Marine	VNSIKGDPKIFYSAGMFKLQKKQKTRQPKAIFTILRALLLKSKNFKTKPVAVHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLRKKKRIKI
Ga0139329_1078314	3300010993	Sediment	TLINVNDIKGNPKFFYSAGMFNLQKTQKVRQPKAIITILKALLVKIKIFRTKPVALHFNNLFFNHQSYVFKKLKKKVFVKLVTSYNYHPHNGCRLKKKKRIKIRTRTRKL*
Ga0138258_15301901	3300012413	Polar Marine	MFNLQKKQKIRQPKAIITILRWLLLKAKLLKTKPVAIHFNNLFSNYQSHIFKKLKTKIFAKLVTSYTYRPHNGCRLKKKKRIKIRTRT
Ga0138259_13764903	3300012416	Polar Marine	FFYSAGMFSLQKKQKIRQPKAIITILRALLLKSKIFKTKPVAVHFNNLFFNHQSYIFKKLKQKIFTKLFISYIYRSHNGCRLKKKKRIKIRTRTKKL*
Ga0129334_11040741	3300012471	Aqueous	MNINLSLTNTFVNLNTIKGHPKFFYSAGMFSFQKKQKIKQPKAVITILKALLSKFKICKAKPAALHFNNLFYNQQSYILKRLKQKIFIKLVMSYNYSSHNGCRLKKKKTN*
Ga0129326_12067865	3300012522	Aqueous	MFNLQKKQKTKQPKAAITMLRALLIKFKICKIKPVVLHFNNLFYNHQSYILKRLKQKLFIKLIMSYNSLPHNGCRLKKKKESKFVHALENYRRND*
Ga0157630_12789023	3300012722	Freshwater	KFFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPAAVHFNNLFFKHQSSIFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKLYKK*
Ga0157610_10317781	3300012725	Freshwater	PKAIITILRALLLKSKFFKTKPAAVHFNNLFFKHQSSIFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKL*
Ga0129335_11945064	3300012962	Aqueous	AGMFNFQKTQKVKQPKAIITILKALLLKFKICKVKPTALHFNNVFANQQSYVLKRLKQKVFIKLIMSYTSQSHNGCRLKKKRRIKIRTRAKKL*
Ga0129346_11128891	3300012965	Aqueous	MFNLQKKQKTKQPKAAITMLRALLIKFKICKIKPVVLHFNNLFYNHQSYILKRLKQKLFIKLIMSYNSLSHNGCRLKKKKNNKNT
Ga0129341_13661451	3300012966	Aqueous	MFNLQKTQKVRQPKAIITILKALLVKIKIFRTKPVALHFNNLFFNHQSYVFKKLKNKVFVKLVTSYNYHPHNGCRLKKKKRIKI
Ga0129337_14013022	3300012968	Aqueous	LNNIKGSPKTFFSAGMFNFQKTQKVKQPKAIITILKALLLKFKICKVKPTALHFNNVFANQQSYVLKRLKQKVFIKLIMSYTSQSHNGCRLKKKRRIKIRTRAKKL*
Ga0171648_1358551	3300013108	Marine	MFNLQKKQKIRQPKAMILILRALLLKSKIFKTKPVAIHFNNLFSNYQSYIFKKLKSKIFIKLIVSYTFSSHNGCRLKKKKTD*
Ga0119889_100001143	3300013791	Wastewater	MFNFQKKQKIKQPKAIITILKALLLKFKIYKFKPVALHFNNLFFKQQSYILKRLKQKVFIKLIRSYNYYPHNGCRLKKKKRIKIRTRAKKL*
Ga0193067_10045692	3300018659	Marine	MFQLQKKQKIRQPKAVVIILQTLLLKAKIFKTKPAAIHFNDLYIIYQSYLLKKLKQKIFVKLVVSHSYQSHNGCRLKKKKRLKIRTNTV
Ga0193562_101848872	3300018965	Marine	LTNTLININNIKGSPKFFYSAGMFNLQKKQKIRQPKAIILILRALLSKSKFFKTKPVAIHFNNLFSNYQSSIFKKLKRKIFIKLIVSYIFNSHNGCRPKK
Ga0192947_100343166	3300018982	Marine	MFNLQKKQKIRQPKAMIVILRALLLKSKIFKTKPVAIHFNNLFFNYQSYIFKKLKRKIFIKLIVNYIFGSHNGCRLTKKKRIKIRTRTRKL
Ga0192953_101484301	3300019000	Marine	MFNLQKKQKIRQPKAMIVILRALLLKSKIFKTKPVAIHFNNLFFNYQSYIFKKLKRKIFIKLIVNYIFGSHNGC
Ga0192982_101079301	3300019021	Marine	MGNIKGTPKFFYSAGMFNLQKKQKIRQPKAIIIILRALLLKSKIFRTKPVAVHFNNLFFNYQSHIFKKLKRKVFTKLVISYIFGSHNGCRLKKKKRMKIRTRTRKL
Ga0192951_102966602	3300019022	Marine	MLNLQRKEKIRQPKVTILLLRALLSKSKTLKTKPAALHFNNLFFGYQSYIFKKLKQKVFVKLIINCNHNAHNGCRLKKKNVSKSEPK
Ga0180035_10535731	3300019191	Estuarine	KTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKYQSYILKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL
Ga0180035_10674482	3300019191	Estuarine	MEILNFFFSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFNHQSYIFKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL
Ga0180032_10357315	3300019201	Estuarine	MFKLQKTQKTRQPKAIITILRALLLKSKFFKTKPTALHFNNLFFNHQSYIFKRLKRKVFAKLITSYLYRPHNGCRLRKKKRIKVRTKTRKL
Ga0194007_10068421	3300019697	Sediment	KRQKTRQPKAIITILRALLSKSKSFKIKPAAVHFNNLFFNHQSYIFKKLKQKVFIKLITSYNYRPHNGCRLKKKKRIKIRTRTRKL
Ga0193994_10345491	3300019738	Sediment	IKGNPKFFYSAGMFNLQKNQKTRQPKAIITILRALLSKSKIFKTKPVAVHFNNLFFNHQSYIFKKLKQKVFIKLITSYNYRPHNGCRLKKKKRIKVRTRTRKL
Ga0193978_10687801	3300019747	Sediment	FFYSAGMFSLQKNQKIRQPKAIITILRALLAKSKIFKVKPVAVHFNNVFFNHQSYIFKKLKQKIFMKLVTSYNFRSHNGCRLKKKKRIKIRTRTRKL
Ga0194000_10375524	3300019750	Sediment	MFNLQKTQKVRQPKAIITILKALLVKIKIFRTKPVALHFNNLFFNHQSYVFKKLKNKVFVKLVTSYNYHPHNGCRLKKKKRIKIRTRTKKL
Ga0208358_10558573	3300020555	Freshwater	SVNNVNGNPKFFYSAGMFNLQKKQKIRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKYQSYILKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL
Ga0210307_10811881	3300021336	Estuarine	LPTNTLINVNDIKGNPKFFYSAGMFKLQKRQKIRQPKAIFTILRALLLKSKIFKTKPVAIHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLKKKKRIKIRTRSKR
Ga0210307_13353561	3300021336	Estuarine	MILKVTLSFFILQGCLIYKKTQKVRQPKAIIIILKALLVKIKAFRTKPVALHFNNLFFNHQSYIYKKLNQKIFIKLVTSYNYHPHNGCRLKKKKRIKIRTRTKKL
Ga0222719_100421671	3300021964	Estuarine Water	SLTNTLINVNDIKGNPKFFYSAGMFNLQKTQKVRQPKAIITILKALLVKIKIFRTKPVALHFNNLFFNHQSYVFKKLKKKVFVKLVTSYNYHPHNGCRLKKKKRIKIRTRTRKL
Ga0224498_101568973	3300022202	Sediment	TNTLINVNSIKGNPKFFYSAGMFNLQKTQKIRQPKAIITILKALLVKMKIFRAKPVALHFNNLFFNYQSYIYKKLKRKVFIKLVTSYNYQPHNGCRLKKKKRIKIRTRTKKL
Ga0210312_1070214	3300022367	Estuarine	KKQKTRQPKAIFTILRALLLKSKNFKTKPVAVHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLRKKKRIKIRTRAK
Ga0210310_10140004	3300022369	Estuarine	TNTLINVNSIKGNPKFFYSAGMFSLQKNQKTRQPKAIITILRALLAKSKIFKVKPVAVHFNNVFFNHQSYIFKKLKQKIFMKLVTSYNFRSHNGCRLKKKKRIKIRTRTRKL
Ga0210311_10280611	3300022374	Estuarine	MFNLQKTQKVRQPKAIITILRAFLTKSKLFKTKPVAVHFKNLFFNHQSYIFKKLKQKVFAKLMTGYISRPHNGCRLRKKKRIKIRTRTKKLLKK
(restricted) Ga0255039_102038061	3300024062	Seawater	MFSLQKNQKTRQPKAIITILRALLAKSKIFKVKPVAVHFNNVFFNHQSYIFKKLKQKIFMKLVTSYNFRSHNGCRLKKKKRIKIRTRTRKL
Ga0244775_105454524	3300024346	Estuarine	MFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPAAVHFNNLFFKHQSSIFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKL
Ga0244775_115655263	3300024346	Estuarine	NPKFFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKHQSYVFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKL
Ga0256356_10281925	3300024546	Freshwater	TNTLVNVNDIKGNPKFFYSAGMFNLQKTQKVRQPKAIITILKALLVKIKLFRTKPVALHYNNLFFNHQSYIFKKLKQKIFIKLVTSYNYHPHNGCRLKKKKTN
Ga0208150_10609211	3300025751	Aqueous	PKFFYSAGMFNLQKKQKIRQPKAIIIILRALLLKSKIFRTKPVAVHFNNLFFNYQSHIFKKLKRKVFTKLVISYIFGSHNGCRLKKKKRMKIRTRTRKL
Ga0207912_1003381	3300025752	Deep Ocean	YSAGMFNLQKTQKVRQPKAIITILKALLVKIKIFRTKPVALHFNNLFFNHQSYVFKKLKKKVFVKLVTSYNYHPHNGCRLKKKKRIKIRTRTRKL
Ga0209137_11515031	3300025767	Marine	DIKGNPKFFYSAGMFNLQKTQKVRQPKAIITILKSLLVKIKVFRTKPVALHFNNLFFNHQSYIYKKLKRKIFIKLVTSYNYHPHNGCRLKKKKRIKIRTRTKKL
Ga0208544_1000026539	3300025887	Aqueous	LPTNTLINVNDIKGNPKFFYSAGMFKLQKRQKIRQPKAIFTILRALLLKSKIFKTKPVAIHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLKKKKRIKIRTRSKRA
Ga0208675_10201264	3300027189	Estuarine	QKTRQPKAIITILRALLLKSKFFKTKPAAVHFNNLFFKHQSSIFKKLKRKIFAKLVISYLYKAHNGCRLRKKKRIKIRTRTRKL
Ga0208309_10094685	3300027226	Estuarine	PKIFYSAGMFKLQKKQKTRQPKAIFTILRALLLKSKNFKTKPVAVHFNNLFFNYQSYILKKLKQKIFAKLIISYIYRPHNGCRLRKKKRIKIRTRAK
Ga0208445_10252441	3300027245	Estuarine	AGMFNLQKKQKIRQPKAIIIILRALLLKSKIFRTKPVAVHFNNLFFNYQSNIFKKLKRKVFTKLVISYIFGSHNGCRLKKKKRMKIRTRTRKL
Ga0208175_10030121	3300027249	Estuarine	APKFFYSAGMFNLQKKQKIRQPKAIIIILRALLLKSKIFRTKPVAVHFNNLFFNYQSNIFKKLKRKVFTKLVISYIFGSHNGCRLKKKKRMKIRTRTRKL
Ga0208973_11310983	3300027506	Marine	FFYSAGMFSLQKNQKTRQPKAIITILRALLAKSKIFKVKPVAVHFNNVFFNHQSYIFKKLKQKIFMKLVTSYNFRSHNGCRLKKKKRIKIRTRTRKL
Ga0209812_100849043	3300027786	Wastewater Effluent	MFNFQKKQKIKQPKAIITILKALLLKFKTYKFKPVALHFNNLFFKQQSYILKRLKQKVFIKLIMSYNYYPHNGCRLKKKKRIKIRTRTKKL
Ga0209230_105526851	3300027836	Freshwater And Sediment	SVKGNPKFFYSAGMFNLQKKQKTRQPKAIITILRALLLKSKILKIKPAAVHFNNLFFNHQSYIFKKLKQKIFAKLVTSYLQGPHNGCRLKKKKRIKIRTRTRKV
Ga0209712_103331611	3300027849	Marine	GNPKFFYSAGMFNLQKKQKIRQPKATILILRALLLKSKVFKTKPVAVHFNNLFFNYQSYIFKKLKQKIFTKLVMSYIFHSHNGCRLKKKKRIKIRTRTRKL
Ga0209668_1000008433	3300027899	Freshwater Lake Sediment	MFKLQKTQKTRQPKAIITILRALLLKSKAFKTKPAALHFNNLFFNHQSYIFKRLKRKVFAKLITSYLYRPHNGCRLRKKRRIKIRTRTKKL
Ga0210315_10006444	3300028329	Estuarine	MEILNFFIQQGCLTYKKNKKTRQPKAIITILRALLLKSKIFKTKPVAVHFNNLFFKYQSYIFKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL
Ga0335051_0142899_895_1224	3300034109	Freshwater	IVSVNNVNGNPKFFYSAGMFNLQKKQKIRQPKAIITILRALLLKSKFFKTKPVAVHFNNLFFKYQSYILKKLKQKIFAKLVTSYLYKAHNGCRLKKKKRIKIRTRTRKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters