Metagenome Family F094062

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094062
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	60 residues
Representative Sequence	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKRRKGKEA
Number of Associated Samples	62
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.49 %
% of genes near scaffold ends (potentially truncated)	22.64 %
% of genes from short scaffolds (< 2000 bps)	78.30 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.717 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (31.132 % of family members)
Environment Ontology (ENVO)	Unclassified (49.057 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.283 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.88% β-sheet: 0.00% Coil/Unstructured: 54.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF14659	Phage_int_SAM_3	6.60
PF07589	PEP-CTERM	4.72
PF00589	Phage_integrase	4.72
PF04657	DMT_YdcZ	4.72
PF08238	Sel1	2.83
PF07021	MetW	2.83
PF03205	MobB	1.89
PF01725	Ham1p_like	1.89
PF04355	SmpA_OmlA	0.94
PF00773	RNB	0.94
PF04456	DUF503	0.94
PF17191	RecG_wedge	0.94
PF08734	GYD	0.94
PF04862	DUF642	0.94
PF00293	NUDIX	0.94
PF13276	HTH_21	0.94
PF06271	RDD	0.94
PF01458	SUFBD	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	4.72
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	1.89
COG1763	Molybdopterin-guanine dinucleotide biosynthesis protein	Coenzyme transport and metabolism [H]	1.89
COG0557	Exoribonuclease R	Transcription [K]	0.94
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG1550	Stress-induced protein YlxP, DUF503 family	Function unknown [S]	0.94
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.94
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	0.94
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.94
COG4776	Exoribonuclease II	Transcription [K]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
All Organisms	root	All Organisms	45.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
cellular organisms	root	All Organisms → cellular organisms	43.40 %
Viruses	superkingdom	All Organisms → Viruses	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	26.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	26.42 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	21.70 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.94 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.94 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.09 %
Deltaproteobacteria bacterium RBG_16_64_85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_64_85	1.89 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	1.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Deltaproteobacteria bacterium CG2_30_66_27	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG2_30_66_27	0.94 %
Deltaproteobacteria bacterium RBG_16_49_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	0.94 %
Deltaproteobacteria bacterium 21-66-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-5	0.94 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.94 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.94 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.09 %
Deltaproteobacteria bacterium RBG_16_64_85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_64_85	1.89 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	1.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.94 %
Deltaproteobacteria bacterium CG2_30_66_27	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG2_30_66_27	0.94 %
Deltaproteobacteria bacterium RBG_16_49_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	0.94 %
Deltaproteobacteria bacterium 21-66-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-5	0.94 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.94 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	15.09 %
Deltaproteobacteria bacterium RBG_16_64_85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_64_85	1.89 %
Deltaproteobacteria bacterium 37-65-8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	1.89 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Geobacter benzoatilyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter benzoatilyticus	0.94 %
Deltaproteobacteria bacterium CG2_30_66_27	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG2_30_66_27	0.94 %
Deltaproteobacteria bacterium RBG_16_49_23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	0.94 %
Deltaproteobacteria bacterium 21-66-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-5	0.94 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.94 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_20701_len_3608_cov_14_218404	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	3658	Open in IMG/M
3300004049\|Ga0055493_10102543	Not Available	613	Open in IMG/M
3300006224\|Ga0079037_100230462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1682	Open in IMG/M
3300006224\|Ga0079037_100338174	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300006224\|Ga0079037_100395174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1307	Open in IMG/M
3300006224\|Ga0079037_100594491	Not Available	1073	Open in IMG/M
3300006224\|Ga0079037_101224428	Not Available	747	Open in IMG/M
3300006224\|Ga0079037_101316333	Not Available	719	Open in IMG/M
3300006930\|Ga0079303_10365311	Not Available	607	Open in IMG/M
3300008255\|Ga0100403_1267849	Not Available	580	Open in IMG/M
3300009091\|Ga0102851_10018260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5085	Open in IMG/M
3300009091\|Ga0102851_10098277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-5	2529	Open in IMG/M
3300009091\|Ga0102851_10366254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1438	Open in IMG/M
3300009091\|Ga0102851_10367841	Not Available	1435	Open in IMG/M
3300009091\|Ga0102851_10614184	Not Available	1138	Open in IMG/M
3300009091\|Ga0102851_11293210	Not Available	806	Open in IMG/M
3300009111\|Ga0115026_10013406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3736	Open in IMG/M
3300009167\|Ga0113563_10074157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3002	Open in IMG/M
3300009167\|Ga0113563_10251795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	1797	Open in IMG/M
3300009167\|Ga0113563_10520053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	1302	Open in IMG/M
3300009179\|Ga0115028_10169047	Not Available	1347	Open in IMG/M
3300009506\|Ga0118657_10000065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	149191	Open in IMG/M
3300010413\|Ga0136851_10823320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	909	Open in IMG/M
3300011402\|Ga0137356_1001121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter benzoatilyticus	4490	Open in IMG/M
3300011402\|Ga0137356_1010318	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300011402\|Ga0137356_1019167	Not Available	1229	Open in IMG/M
3300011416\|Ga0137422_1017361	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	1682	Open in IMG/M
3300012164\|Ga0137352_1018246	Not Available	1306	Open in IMG/M
3300012164\|Ga0137352_1107886	Not Available	551	Open in IMG/M
3300012931\|Ga0153915_10142306	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300012931\|Ga0153915_10188863	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2256	Open in IMG/M
3300012931\|Ga0153915_10721569	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1152	Open in IMG/M
3300012931\|Ga0153915_11794150	Not Available	718	Open in IMG/M
3300013092\|Ga0163199_1092722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium CG2_30_66_27	1284	Open in IMG/M
3300014271\|Ga0075326_1004910	All Organisms → cellular organisms → Bacteria	3052	Open in IMG/M
3300014321\|Ga0075353_1021458	Not Available	1173	Open in IMG/M
3300014865\|Ga0180078_1001149	All Organisms → cellular organisms → Bacteria	3016	Open in IMG/M
3300014867\|Ga0180076_1092109	Not Available	558	Open in IMG/M
3300014880\|Ga0180082_1008161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 37-65-8	2077	Open in IMG/M
3300014884\|Ga0180104_1010659	Not Available	2132	Open in IMG/M
3300014885\|Ga0180063_1051972	Not Available	1182	Open in IMG/M
3300014885\|Ga0180063_1204873	Not Available	634	Open in IMG/M
3300015253\|Ga0180081_1090630	Not Available	555	Open in IMG/M
3300018059\|Ga0184615_10176290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1206	Open in IMG/M
3300018059\|Ga0184615_10660262	Not Available	537	Open in IMG/M
3300018070\|Ga0184631_10082623	Not Available	1230	Open in IMG/M
3300018084\|Ga0184629_10270500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	891	Open in IMG/M
3300022226\|Ga0224512_10151030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1230	Open in IMG/M
3300025164\|Ga0209521_10032610	All Organisms → cellular organisms → Bacteria	3617	Open in IMG/M
3300025174\|Ga0209324_10102247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1962	Open in IMG/M
3300026090\|Ga0208912_1015896	Not Available	1058	Open in IMG/M
3300027715\|Ga0208665_10025250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1612	Open in IMG/M
3300027831\|Ga0209797_10174945	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300027843\|Ga0209798_10311210	Not Available	753	Open in IMG/M
3300027871\|Ga0209397_10107950	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1178	Open in IMG/M
3300027877\|Ga0209293_10188586	Not Available	1005	Open in IMG/M
3300027899\|Ga0209668_10417630	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	880	Open in IMG/M
3300027900\|Ga0209253_10127321	Not Available	2075	Open in IMG/M
3300031539\|Ga0307380_10103319	All Organisms → cellular organisms → Bacteria	2931	Open in IMG/M
3300031772\|Ga0315288_11156858	Not Available	671	Open in IMG/M
3300031834\|Ga0315290_11045630	Not Available	685	Open in IMG/M
3300031949\|Ga0214473_11975313	Not Available	570	Open in IMG/M
3300031965\|Ga0326597_10164690	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300031997\|Ga0315278_10168519	All Organisms → cellular organisms → Bacteria	2244	Open in IMG/M
3300031997\|Ga0315278_10410652	All Organisms → Viruses → Predicted Viral	1397	Open in IMG/M
3300031997\|Ga0315278_10658209	Not Available	1068	Open in IMG/M
3300031997\|Ga0315278_11104305	Not Available	784	Open in IMG/M
3300032143\|Ga0315292_10758917	Not Available	814	Open in IMG/M
3300032342\|Ga0315286_10248372	All Organisms → Viruses → Predicted Viral	1894	Open in IMG/M
3300032342\|Ga0315286_10608841	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300032397\|Ga0315287_12561153	Not Available	546	Open in IMG/M
3300032516\|Ga0315273_10142193	Not Available	3290	Open in IMG/M
3300033233\|Ga0334722_10001112	All Organisms → cellular organisms → Bacteria	35079	Open in IMG/M
3300033406\|Ga0316604_10073490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_64_85	1771	Open in IMG/M
3300033406\|Ga0316604_10090316	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300033406\|Ga0316604_10206821	Not Available	1059	Open in IMG/M
3300033406\|Ga0316604_10738777	Not Available	541	Open in IMG/M
3300033408\|Ga0316605_10063894	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M
3300033408\|Ga0316605_10090580	Not Available	2328	Open in IMG/M
3300033408\|Ga0316605_10097258	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300033408\|Ga0316605_10355728	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1306	Open in IMG/M
3300033408\|Ga0316605_10388704	Not Available	1255	Open in IMG/M
3300033408\|Ga0316605_10405811	Not Available	1231	Open in IMG/M
3300033413\|Ga0316603_10176102	Not Available	1797	Open in IMG/M
3300033413\|Ga0316603_10305106	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_64_85	1407	Open in IMG/M
3300033413\|Ga0316603_10366373	Not Available	1293	Open in IMG/M
3300033413\|Ga0316603_10716543	Not Available	935	Open in IMG/M
3300033413\|Ga0316603_10743303	Not Available	919	Open in IMG/M
3300033413\|Ga0316603_12046138	Not Available	541	Open in IMG/M
3300033413\|Ga0316603_12247770	Not Available	514	Open in IMG/M
3300033414\|Ga0316619_10874896	Not Available	774	Open in IMG/M
3300033416\|Ga0316622_101324574	Not Available	842	Open in IMG/M
3300033416\|Ga0316622_103375638	Not Available	503	Open in IMG/M
3300033419\|Ga0316601_101159105	Not Available	774	Open in IMG/M
3300033419\|Ga0316601_101361486	Not Available	713	Open in IMG/M
3300033480\|Ga0316620_11150557	Not Available	759	Open in IMG/M
3300033481\|Ga0316600_11093441	Not Available	565	Open in IMG/M
3300033481\|Ga0316600_11251612	Not Available	527	Open in IMG/M
3300033482\|Ga0316627_101601837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13	663	Open in IMG/M
3300033485\|Ga0316626_10204551	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1554	Open in IMG/M
3300033485\|Ga0316626_10744496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_49_23	856	Open in IMG/M
3300033485\|Ga0316626_10904978	Not Available	779	Open in IMG/M
3300033487\|Ga0316630_11075597	Not Available	707	Open in IMG/M
3300033521\|Ga0316616_101371336	Not Available	909	Open in IMG/M
3300033557\|Ga0316617_100792041	Not Available	906	Open in IMG/M
3300033557\|Ga0316617_101776233	Not Available	629	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	58.49%
Terrestrial	Environmental → Terrestrial	41.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.62%
Freshwater	Environmental → Aquatic → Freshwater	38.68%
Sediment	Environmental → Aquatic → Sediment	16.98%
Marine	Environmental → Aquatic → Marine	2.83%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.89%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	33.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.98%
Lake	Environmental → Aquatic → Freshwater → Lake	12.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.77%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Sediment	Environmental → Aquatic → Marine → Sediment	0.94%
Clay	Environmental → Terrestrial → Soil → Clay	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	33.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	19.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	11.32%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.83%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.94%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.94%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.94%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	31.13%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	14.15%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	12.26%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	11.32%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.77%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.89%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.94%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	0.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.94%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.94%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300008255	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014867	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT433_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300022226	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300026090	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00849710	2088090008	Soil	MAVYTQCRRKGGNMEDEIKVIARMDRKKKVRLYHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKKKQGKGA
Ga0055493_101025431	3300004049	Natural And Restored Wetlands	MEDEIRVIARMDRKKNIRLFHVLLDEERTFSAWLREQVDAYLAEKEPKGKRRKGKEA*
Ga0079037_1002304622	3300006224	Freshwater Wetlands	MEDEIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQADSYLAEKEGKKPVPGRRRPK*
Ga0079037_1003381743	3300006224	Freshwater Wetlands	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKKKQ*
Ga0079037_1003951742	3300006224	Freshwater Wetlands	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKETKGKKKGMGGVKDGR*
Ga0079037_1005944913	3300006224	Freshwater Wetlands	VEDEIKVIARMNRGKKIRLYHVLLDERKTFSSWLRDQIDSYLLEKEPKGKKKGKGA*
Ga0079037_1012244282	3300006224	Freshwater Wetlands	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRGQIDSYLAEKEPKGKKKQGKGA*
Ga0079037_1013163332	3300006224	Freshwater Wetlands	MEDEIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA*
Ga0079303_103653113	3300006930	Deep Subsurface	MEDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKDKRKDKEG*
Ga0100403_12678491	3300008255	Aquifer	IKVIARMDRKKKIRLFHVLLDEQKTFSAWLRDQVDSYLAEKEGKGKKKQRKGGVKDGR*
Ga0102851_100182605	3300009091	Freshwater Wetlands	MAVYTQRRKNEGTMEDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKDKRKDKEG*
Ga0102851_100982776	3300009091	Freshwater Wetlands	MPEEGGTMEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRGQIDSYLAEKEPKGKKKQGKGA*
Ga0102851_103662542	3300009091	Freshwater Wetlands	MAVYTQRRRKEGTMEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKETKGKKKGMGGVKDGR*
Ga0102851_103678411	3300009091	Freshwater Wetlands	MAVYTHRRKMGGCVEDEIKVIARMNRGKKIRLYHVLLDERKTFSSWLRDQIDSYLLEKEPKGKKKGKGA*
Ga0102851_106141843	3300009091	Freshwater Wetlands	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKKKQGKGA*
Ga0102851_112932102	3300009091	Freshwater Wetlands	MAVYTQCREKGGNMEDEIKVIARMDRKKKVRLYHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA*
Ga0115026_100134068	3300009111	Wetland	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKDKRKGKEG*
Ga0113563_100741571	3300009167	Freshwater Wetlands	MEGTMEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKDKRKD
Ga0113563_102517952	3300009167	Freshwater Wetlands	MAVYTQRRRKEGTMEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKETKGKKKGKGGVKDGR*
Ga0113563_105200532	3300009167	Freshwater Wetlands	MEDEIRVIARMDRKKKIRLFHVLLDEERTFSAWLREQVDAYLAEKEPKGKRRKGKEA*
Ga0115028_101690472	3300009179	Wetland	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDSYLAEKEPKGKKKGKGGVKDGR*
Ga0118657_10000065134	3300009506	Mangrove Sediment	MEDEVKVIARMDRKKKIRLHHILLDEGTTFSGWLRRQIDAYIEERKPKGIRRRGKGA*
Ga0136851_108233201	3300010413	Mangrove Sediment	MEDEVKVIARMDRKKKIRLYHILLDEGITFSEWLRRNIDAYIEEKEPKQKRRKRKEG*
Ga0137356_10011213	3300011402	Soil	MPERGDDMEDEIRVIARMDRKKKIRLYHVLLDEGRTFSAWLRDQVDSYLAEKEGKGKGRKRKGA*
Ga0137356_10103184	3300011402	Soil	MMEDEIMVIARMDRKKKIRLFHVLLDEERTFSAWLRDQIDAYLAEKEPKGKRTKGKGA*
Ga0137356_10191672	3300011402	Soil	MEEEIMVIARMERKKKIRGRTFSAWLRDQVDSYLAEKEPKGKKRKRKET*
Ga0137422_10173611	3300011416	Soil	MMEDEIMVIARMDRKKKIRLFHVLLDEERTFSAWLRDQIDAYLAEEEPKGKRTKGKGA*
Ga0137352_10182462	3300012164	Soil	MEEEIMVIARMERKKKIRLFHVFLDEGRTFSAWLRDQVDSYLAEKEPKGKKRKRKET*
Ga0137352_11078861	3300012164	Soil	MSICRERGEDMEDEIRVIARIDRKKKIRLFHVLLDEERTFSAWLREQVDAYLAEKEPKGKRRKGKEA*
Ga0153915_101423062	3300012931	Freshwater Wetlands	MAVYTQCRKEGGTMNDEIKVIARMDRKKKVRLYHVLLDEGKTFSAWLRVQVDSYLAEKEPKVKRRKGKEV*
Ga0153915_101888633	3300012931	Freshwater Wetlands	MEDEIKVIARMDRKKKIRLYHVLLDEGRTFSAWLRDQVDSYLAEKETKGKKKSGKGA*
Ga0153915_107215692	3300012931	Freshwater Wetlands	MEDEIKVIARMDRKMKIRLYHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKRKGKEA*
Ga0153915_117941502	3300012931	Freshwater Wetlands	MAVYTQCRKNEGTMEDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKGKRRKGKEG*
Ga0163199_10927222	3300013092	Freshwater	MEDEVKVIARMDRKKKIRLYHVLLDEGITFSEWLRRNIDAYLAEKETKRKEEKPRGKG*
Ga0075326_10049104	3300014271	Natural And Restored Wetlands	MEYAKTLRSYPPPVEGMMEDEIMVIARMDRKKKVRLFHVLLDEERSFSAWLRDPIDVYLAEKESKGKRTRGKGA*
Ga0075353_10214584	3300014321	Natural And Restored Wetlands	MAVYTQCRKKEGTMEDEIKVIARMDRKKKVRLFHVLLDEQRTFSAWLRDQIDTYLAEKEPKAKRKGRGEQP*
Ga0180078_10011492	3300014865	Soil	MMEDEIMVIARMDRKKKIRLFHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKRTKGKGA*
Ga0180076_10921091	3300014867	Soil	MEEEIMVIARMERKKKIRLFHVLLDEGRTFSAWLRDQVDTYLAEKEPKGKKRKRKET*
Ga0180082_10081612	3300014880	Soil	MIEDEIMVIARMDRKKKIRLFHVLLDEERTFSAWLRDQIDAYLAEKEPKGKRIKGKGA*
Ga0180104_10106593	3300014884	Soil	MEEEIMVIARMERKKKIRLFHVLLDEGRTFSAWLRDQVDSYLAEKEPKGKKRKRKET*
Ga0180063_10519722	3300014885	Soil	MAVYTQCRKEGGTMEDEIKVIARMDRKKKVRLYHVLLDEGKTFSAWLRVQVDSYLAEKEPKVKRRKGKEG*
Ga0180063_12048731	3300014885	Soil	MPERGDDMEDEIRVIARMDRKKKIRLYHVLLDEGRTFSAWLRNQIDSYLAEKEPKRKGLKGKEG*
Ga0180081_10906301	3300015253	Soil	MAVHTQCLKKEGKMEDEIKVIARMDRKKKIRLFHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKRTKGKGA*
Ga0184615_101762903	3300018059	Groundwater Sediment	MEDEIKVIARMDRKKKIRLFHVLLDEQKTFSAWLREQVDSYLAEKEPKGKKKGKGA
Ga0184615_106602621	3300018059	Groundwater Sediment	VEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLREQVDAYLAEKEPKGKR
Ga0184631_100826232	3300018070	Groundwater Sediment	MPLYLYDEKVGDMDDEIRVIARMNRGKKIRLYHLLLDERKTFSAWLREQVDAYIEAKEPKGKRRKGKEA
Ga0184629_102705003	3300018084	Groundwater Sediment	MAVYTKRRKTEGMVEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLREQVDAYLAEKEPKGKR
Ga0224512_101510302	3300022226	Sediment	MEDEVKVIARMDRKKKVRLYHVLLDEGITFSEWLRRQIDDYLKEKEPKKSRGGGT
Ga0209521_100326105	3300025164	Soil	MDDEVKVIARMDRKKKVRLYHVLLDEGITFSEWLRRQIDACLAEKEPKGKRHRGKGERL
Ga0209324_101022471	3300025174	Soil	GEGRGSMDDEVKVIARMDRKKKVRLYHVLLDEGITFSEWLRRQIDACLAEKEPKGKRHRGKGERL
Ga0208912_10158964	3300026090	Natural And Restored Wetlands	MEDEIMVIARMDRKKKVRLFHVLLDEERSFSAWLRDPIDVYLAEKESKGKRTRGKGA
Ga0208665_100252502	3300027715	Deep Subsurface	MAVYTHRRKMGGCVEDEIKVIARMNRGKKIRLYHVLLDERKTFSSWLRDQIDSYLLEKEPKGKKKGKGA
Ga0209797_101749454	3300027831	Wetland Sediment	MEDEIKVIARMDRKKKIRLFHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKKKGKGA
Ga0209798_103112102	3300027843	Wetland Sediment	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDSYLAEKEPKGRKK
Ga0209397_101079504	3300027871	Wetland	MEDEIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA
Ga0209293_101885863	3300027877	Wetland	MEDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKDKRKDKEG
Ga0209668_104176302	3300027899	Freshwater Lake Sediment	MEDEIMVIARMDRKKKLRLFHVLLDEGRTFSAWLRDQVDSYLAEKEPKGKRKGKEG
Ga0209253_101273214	3300027900	Freshwater Lake Sediment	MEDEIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDRVDSYLAEKERKKPATGRRRSK
Ga0307380_101033195	3300031539	Soil	MEDEIRVIARMDRKKKIRLYHLLLDEGTTFSAWLRGQVDAYIAEKEPKRKRRKGKGA
Ga0315288_111568581	3300031772	Sediment	MDDEIRVIARMNRGKKIRLYHLLLDERKTFSAWLREQVDAYIEAKEPKGKRRKGKEA
Ga0315290_110456301	3300031834	Sediment	MDDEIKVIARMNRGKKIRLYHLLLDEGRTFSAWLREQVDAYIEAKEPKGKKKGKGA
Ga0214473_119753131	3300031949	Soil	MHDEVKVIARMDRKKKVRLYHVLLDEGITFSEWLRRQIDACLAEKEPKGKRRKTA
Ga0326597_101646901	3300031965	Soil	GRKEGKMEDEIKVIARMDRKKKIRLYHVLLDEGRTFSAWLRDQIDAYLAKKEPNGKRRKGKGREG
Ga0315278_101685192	3300031997	Sediment	MEDEIKVIARMDRKKKIRLYHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKRREGKEGKGNGKRQGNL
Ga0315278_104106523	3300031997	Sediment	EIKVIARMNRGKKIRLYHLLLDEGRTFSAWLRGQVDAYIEAKEPKAKSKGKGGRR
Ga0315278_106582092	3300031997	Sediment	MEDEIRVIARMNRGKKVRLYHVLLDEGRTFSAWLRDQVDSYLAEKEPKRKKKPRKGA
Ga0315278_111043052	3300031997	Sediment	MNDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLREQVDAYLAAKEPKAKRRKGKEG
Ga0315292_107589174	3300032143	Sediment	ARMNRGKKIRLYHLLLDERKTFSAWLREQVDAYIEAKEPKGKRRKGKEA
Ga0315286_102483721	3300032342	Sediment	DEIKVIARMNRGKKIRLYHLLLDEGRTFSAWLRGQVDAYIEAKEPKAKSKGKGGRR
Ga0315286_106088413	3300032342	Sediment	MEDEIKVIARMNRKKKIRLCHLLLDEGTTFSAWLRGQVDAYIEAKEPKAKRRKAREG
Ga0315287_125611532	3300032397	Sediment	MDDEIKVIARMNRGKKIRLYHLLLDEGRTFSAWLRGQVDAYIEAKEPKAKSKGKGGRR
Ga0315273_101421934	3300032516	Sediment	MEDEIRVIARMDRGKKIRLYHLLLDERKTFSAWLREQVDAYLLAKEPKGKRRKGKEA
Ga0334722_1000111238	3300033233	Sediment	MEDEVKVIARMDRKKKVRLYHVLLDEGITFSEWLRRRIDEYLAEKEPKGKRRKGKEV
Ga0316604_100734903	3300033406	Soil	MEDEIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQADSYLAEKEGKKPVPGRRRPK
Ga0316604_100903162	3300033406	Soil	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRGQIDSYLAEKEPKGKKKQGKGA
Ga0316604_102068213	3300033406	Soil	MEDEIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKNKQRKGA
Ga0316604_107387771	3300033406	Soil	MEDEIMVIARMDRKKKIRLFHVLLDEGRTFSAWLRDQIDAYLAEKEPKGK
Ga0316605_100638944	3300033408	Soil	MEDEIKVIARMDRKKKVRLYHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA
Ga0316605_100905802	3300033408	Soil	VEDEIKVIARMNRGKKIRLYHVLLDERKTFSSWLRDQIDSYLLEKEPKGKKKGKGA
Ga0316605_100972581	3300033408	Soil	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA
Ga0316605_103557282	3300033408	Soil	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKETKGKKKGKGGVKDG
Ga0316605_103887041	3300033408	Soil	MEDEIMVIARMDRKKKIRLFHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKRTKGKGA
Ga0316605_104058113	3300033408	Soil	MDDEIKVIARMDRKKKIRLFHVLLDEGRTFSAWLREHVDAYLQEKEPKGKGRKRKEA
Ga0316603_101761021	3300033413	Soil	MAVYTQCREKGGNMEDEIKVIARMDRKKKVRLYHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA
Ga0316603_103051062	3300033413	Soil	MEDEIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQADSYLAEKEGKKPVPGRRRSK
Ga0316603_103663731	3300033413	Soil	MDDEIKVIARMDRKKKIRLFHVLLDEGRTFSAWLREQVDAYLQEKEPKGKGRKRKEA
Ga0316603_107165431	3300033413	Soil	IARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKKKQGKGA
Ga0316603_107433032	3300033413	Soil	MEDEIRVIARMDRKKKIRLFHVLLDEERTFSAWLREQVDAYLAEKEPKGKRRKGKEA
Ga0316603_120461381	3300033413	Soil	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDSYLAEKEPKGKKKPRKGA
Ga0316603_122477701	3300033413	Soil	PPFCMAVYTQRRRKEGTMEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKETKGKKKPRKGA
Ga0316619_108748961	3300033414	Soil	AVYTHRRKMGGCVEDEIKVIARMNRGKKIRLYHVLLDERKTFSSWLRDQIDSYLLEKEPKGKKKGKGA
Ga0316622_1013245743	3300033416	Soil	VIARMNRGKKIRLYHVLLDERKTFSSWLRDQIDSYLLEKEPKGKKKGKGA
Ga0316622_1033756381	3300033416	Soil	IARMDRKKKVRLFHVLLDEQRTFSAWLRDQVDSYLAEKEGKKPVPGRRRSI
Ga0316601_1011591054	3300033419	Soil	RKNEGTMEDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKDKRKDKEG
Ga0316601_1013614861	3300033419	Soil	EIMVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA
Ga0316620_111505572	3300033480	Soil	YTYRRKKEGTMEDEIKVIARMNRKKKIRLFHVLLEEQRTFSAWLRDQIDAYLAEKEPKGKSKFKGR
Ga0316600_110934411	3300033481	Soil	TMPEEGGTMEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRGQIDSYLAEKEPKGKKKQGKGA
Ga0316600_112516121	3300033481	Soil	MEDEIMVIARMDRKKKIRLFHVLLDEERTFSAWLRDQIDAYLAEKEPKGKRTKGKGA
Ga0316627_1016018372	3300033482	Soil	MSICRERGEDMEDEIRVIARMDRKKKIRLFHVLLDEERTFSAWLREQVDAYLAEKEPKGKRRKGKEA
Ga0316626_102045515	3300033485	Soil	DRKKKIRLFHVLLDEQRTFSAWLRDQADSYLAEKEGKKPVPGRRRSK
Ga0316626_107444962	3300033485	Soil	MAVYTMRRKKEGKMEDEIKVIARMDRKKKVRLYHVLLDEGRTFSAWLRDQIDAYLAEKEPKGKKKQRKGA
Ga0316626_109049782	3300033485	Soil	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKRRKGKEA
Ga0316630_110755973	3300033487	Soil	SPPCMAIYTQCRKNEGTMEDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKDKRKDKEG
Ga0316616_1013713363	3300033521	Soil	YRKNEGTMEDEIKVIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKDKRKDKEG
Ga0316617_1007920414	3300033557	Soil	VIARMDRKKKIRLFHILLDEQRTFSAWLRDQIDAYLAEKEPKDKRKDKEG
Ga0316617_1017762331	3300033557	Soil	MEDEIKVIARMDRKKKIRLFHVLLDEQRTFSAWLRDQIDAYLAEKEPKGKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094062

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences