Metagenome / Metatranscriptome Family F094157

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094157
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	66 residues
Representative Sequence	GIRAASAQAVLGWVFFPSSVKYEDGSSWRAQSEGECFDVIWRDQEHPDLPALPPRQIEMNPD
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.66 %
% of genes near scaffold ends (potentially truncated)	92.45 %
% of genes from short scaffolds (< 2000 bps)	86.79 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.755 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (23.585 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.547 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.89% Coil/Unstructured: 91.11%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02744	GalP_UDP_tr_C	3.77
PF13570	PQQ_3	2.83
PF13714	PEP_mutase	2.83
PF05974	DUF892	2.83
PF01541	GIY-YIG	1.89
PF15780	ASH	1.89
PF01070	FMN_dh	1.89
PF00583	Acetyltransf_1	0.94
PF08281	Sigma70_r4_2	0.94
PF13200	DUF4015	0.94
PF12732	YtxH	0.94
PF01189	Methyltr_RsmB-F	0.94
PF03544	TonB_C	0.94
PF00392	GntR	0.94
PF07731	Cu-oxidase_2	0.94
PF02897	Peptidase_S9_N	0.94
PF05345	He_PIG	0.94
PF07730	HisKA_3	0.94
PF04366	Ysc84	0.94
PF05764	YL1	0.94
PF07732	Cu-oxidase_3	0.94
PF00719	Pyrophosphatase	0.94
PF00196	GerE	0.94
PF13432	TPR_16	0.94
PF08544	GHMP_kinases_C	0.94
PF00162	PGK	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	2.83
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.89
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.89
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.89
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	0.94
COG0144	16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family	Translation, ribosomal structure and biogenesis [J]	0.94
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.94
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.94
COG1770	Protease II	Amino acid transport and metabolism [E]	0.94
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.94
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.94
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.94
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.94
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.70 %
Unclassified	root	N/A	28.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.70 %
Unclassified	root	N/A	28.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.75 %
Unclassified	root	N/A	28.30 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.72 %
Unclassified	root	N/A	28.30 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.89 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.89 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Spiralia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Lophotrochozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Mollusca	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Bivalvia	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Autobranchia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Heteroconchia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Euheterodonta	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Imparidentia	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Neoheterodontei	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Venerida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Veneroidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Veneridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Mercenaria	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae → Mercenaria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.57 %
Unclassified	root	N/A	28.30 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.89 %
Mercenaria mercenaria	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae → Mercenaria → Mercenaria mercenaria	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10136439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300001593\|JGI12635J15846_10335744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300001593\|JGI12635J15846_10889878	Not Available	508	Open in IMG/M
3300002245\|JGIcombinedJ26739_100254482	All Organisms → cellular organisms → Bacteria → Acidobacteria	1643	Open in IMG/M
3300004121\|Ga0058882_1648561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300005537\|Ga0070730_10922821	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005541\|Ga0070733_11213225	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005591\|Ga0070761_10362790	Not Available	879	Open in IMG/M
3300005591\|Ga0070761_10386665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300005591\|Ga0070761_10676063	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300005602\|Ga0070762_11249959	Not Available	514	Open in IMG/M
3300005712\|Ga0070764_10067813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1857	Open in IMG/M
3300006052\|Ga0075029_100529420	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300006176\|Ga0070765_101035993	Not Available	776	Open in IMG/M
3300007982\|Ga0102924_1337501	Not Available	586	Open in IMG/M
3300009628\|Ga0116125_1135020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300009641\|Ga0116120_1037742	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300009665\|Ga0116135_1074427	Not Available	1203	Open in IMG/M
3300009759\|Ga0116101_1034757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300010343\|Ga0074044_10306601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300010373\|Ga0134128_12697888	Not Available	547	Open in IMG/M
3300010398\|Ga0126383_11067530	Not Available	897	Open in IMG/M
3300010937\|Ga0137776_1363838	Not Available	503	Open in IMG/M
3300011120\|Ga0150983_15530971	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300014165\|Ga0181523_10810237	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300014200\|Ga0181526_10883314	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300014501\|Ga0182024_10010158	All Organisms → cellular organisms → Bacteria	19282	Open in IMG/M
3300014501\|Ga0182024_12705183	Not Available	530	Open in IMG/M
3300015245\|Ga0137409_10584260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300017948\|Ga0187847_10002593	All Organisms → cellular organisms → Bacteria → Acidobacteria	14504	Open in IMG/M
3300017948\|Ga0187847_10114876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300018012\|Ga0187810_10195114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300018023\|Ga0187889_10292344	Not Available	723	Open in IMG/M
3300018034\|Ga0187863_10007050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7619	Open in IMG/M
3300018037\|Ga0187883_10192945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300018042\|Ga0187871_10110085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300018047\|Ga0187859_10338781	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300018085\|Ga0187772_10761917	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300019158\|Ga0184580_115155	Not Available	712	Open in IMG/M
3300019268\|Ga0181514_1403491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300019786\|Ga0182025_1220809	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300020582\|Ga0210395_10173370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1615	Open in IMG/M
3300021171\|Ga0210405_10164539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1757	Open in IMG/M
3300021181\|Ga0210388_10127953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2193	Open in IMG/M
3300021181\|Ga0210388_11582402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300021401\|Ga0210393_11244593	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300021405\|Ga0210387_11751477	Not Available	525	Open in IMG/M
3300021433\|Ga0210391_11468751	Not Available	523	Open in IMG/M
3300021477\|Ga0210398_11495492	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Lophotrochozoa → Mollusca → Bivalvia → Autobranchia → Heteroconchia → Euheterodonta → Imparidentia → Neoheterodontei → Venerida → Veneroidea → Veneridae → Mercenaria → Mercenaria mercenaria	526	Open in IMG/M
3300022557\|Ga0212123_10455535	Not Available	842	Open in IMG/M
3300022709\|Ga0222756_1003567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1511	Open in IMG/M
3300022721\|Ga0242666_1030349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300023030\|Ga0224561_1001908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1439	Open in IMG/M
3300025134\|Ga0207416_1267949	Not Available	503	Open in IMG/M
3300025463\|Ga0208193_1110146	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300025501\|Ga0208563_1099265	Not Available	562	Open in IMG/M
3300027370\|Ga0209010_1086648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300027439\|Ga0209332_1000005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	51339	Open in IMG/M
3300027559\|Ga0209222_1010958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1839	Open in IMG/M
3300027590\|Ga0209116_1131836	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300027619\|Ga0209330_1009111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2219	Open in IMG/M
3300027698\|Ga0209446_1095646	Not Available	762	Open in IMG/M
3300027737\|Ga0209038_10016570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2166	Open in IMG/M
3300027745\|Ga0209908_10042955	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300027869\|Ga0209579_10085303	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300027879\|Ga0209169_10255824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300028036\|Ga0265355_1021922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300028759\|Ga0302224_10099232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300028766\|Ga0302269_1171236	Not Available	617	Open in IMG/M
3300028775\|Ga0302231_10341771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300028795\|Ga0302227_10205732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300028798\|Ga0302222_10028229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2296	Open in IMG/M
3300028798\|Ga0302222_10041346	Not Available	1877	Open in IMG/M
3300028879\|Ga0302229_10248746	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300029882\|Ga0311368_10334083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300029944\|Ga0311352_10910376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300029952\|Ga0311346_10364984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300030007\|Ga0311338_10500438	Not Available	1275	Open in IMG/M
3300030007\|Ga0311338_11615270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300030043\|Ga0302306_10017039	Not Available	3055	Open in IMG/M
3300030503\|Ga0311370_12094310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300030518\|Ga0302275_10070079	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300030518\|Ga0302275_10565088	Not Available	557	Open in IMG/M
3300030524\|Ga0311357_11009744	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300030580\|Ga0311355_10910856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300030618\|Ga0311354_11170383	Not Available	697	Open in IMG/M
3300030739\|Ga0302311_10070717	All Organisms → cellular organisms → Bacteria → Acidobacteria	2917	Open in IMG/M
3300030746\|Ga0302312_10409414	Not Available	505	Open in IMG/M
3300031090\|Ga0265760_10120474	Not Available	842	Open in IMG/M
3300031231\|Ga0170824_106384667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300031708\|Ga0310686_103870567	Not Available	688	Open in IMG/M
3300031708\|Ga0310686_106277824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2169	Open in IMG/M
3300031715\|Ga0307476_10638359	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300031823\|Ga0307478_10984281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300031891\|Ga0316039_104131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300032515\|Ga0348332_11482295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300032782\|Ga0335082_10165416	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300032783\|Ga0335079_10150103	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300032805\|Ga0335078_10927930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300032828\|Ga0335080_10418297	Not Available	1435	Open in IMG/M
3300032828\|Ga0335080_10882115	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300032892\|Ga0335081_12734265	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300032954\|Ga0335083_10801144	Not Available	756	Open in IMG/M
3300033158\|Ga0335077_10550226	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300034163\|Ga0370515_0333480	Not Available	641	Open in IMG/M
3300034199\|Ga0370514_184003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.42%
Aquatic	Environmental → Aquatic	22.64%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.66%
Peat	Environmental → Terrestrial → Peat	19.81%
Freshwater	Environmental → Aquatic → Freshwater	17.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.77%
Sediment	Environmental → Aquatic → Sediment	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.92%
Loam	Environmental → Terrestrial → Soil → Loam	16.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.09%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.32%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	16.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.77%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.94%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.94%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019158	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025501	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028036	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2	Host-Associated	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031891	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_101364392	3300001546	Forest Soil	EKPGIRAASAQSVLGWVFFPYLVKYEDGTSWHPQSEGECFRVIWRDQQHFDLPALPTRQIEMNPD*
JGI12635J15846_103357441	3300001593	Forest Soil	PILPGQELALEKPGIRAASAQSVLGWVFFPYLVKYEDGTSWHPQSEGECFRVIWRDQQHPDLLALPTRQIEMNPD*
JGI12635J15846_108898781	3300001593	Forest Soil	PWSTAKPISPGQEQTIEKTGIRGESAQTVMGWVFFPSMIKFDDGSVWRPQGEGECFNVIWRDPQHPELMALPPRQSEMNPD*
JGIcombinedJ26739_1002544821	3300002245	Forest Soil	TLEKPGVSPASGEAVLGWVFFPQFVKYEDGTTWRAQTEGECFNVVWRDPEHADMPTLPPRQIEINPD*
Ga0058882_16485611	3300004121	Forest Soil	AEWSWAKPILPSQEQTLERPGTRAASAQSILAWVFFPHSVKFADGSSWQPQSEGECFDIIWRDQQHSDLPVLPPRQIEMNPD*
Ga0070730_109228212	3300005537	Surface Soil	SNSSIAPGKEQTLEKPGIPPASAKNVLGWVFFPYSVKYDDGSEWHAQSEGECFKVVWRDAEHPNVPALPPLQREINAD*
Ga0070733_112132252	3300005541	Surface Soil	PPASAKNILGWVFFPYSVKYADGSEWHSQSEGECFKVIWRDPEHPNVPALPPRQREINAD
Ga0070761_103627903	3300005591	Soil	GQEQTIEEPGLSPAGAATIMGWVFFPATVKFDDGTIWRPQSEGECFHVIWRDPQHPEMPALPPRQIEINPD*
Ga0070761_103866652	3300005591	Soil	LGWVFFPQSVKYEDGTNWLAQSEGECFNVIWRDQQHPDLPALPPRQIEMNAD*
Ga0070761_106760632	3300005591	Soil	PIAPGQELTLEKPGIRADSAQTVLGWIFFPSSIKYEDGSVWRPQNEGECFNVIWRDEPHPDMWALPPRQIEINPD*
Ga0070762_112499591	3300005602	Soil	WVFFPYSVKYEDGTSWHPQSEGECFTVIWRDPQHPDIPALPTRQIEMNPD*
Ga0070764_100678133	3300005712	Soil	QAVLGWVFFPNAVKFEDGTTWHAQSEGECFDVIWRDQQHPDLPALPPRQIEMNPD*
Ga0075029_1005294202	3300006052	Watersheds	MAPNEQQVIEQPGIPAASAQKILGWVFFPNFVKYQDGTEWLPASEGECFKVIWRDSDHPDMPALPPRQFEINAD*
Ga0070765_1010359931	3300006176	Soil	SAQSVLGWIYFPYSVKYEDGTSWHPQSEGECFTVIWRDPQHPDIPALPTRQIEMNPD*
Ga0102924_13375011	3300007982	Iron-Sulfur Acid Spring	ILGWAILPSSVKYEDGTSWHAQSEGECFDVIWRDQSHPQILALPPRQIEINPD*
Ga0116125_11350202	3300009628	Peatland	VPAASAQSILGWVFFPHSVKYDDGTAWHAQSEGECFDVIWRDQQHPDLPVLPSRQIEMNPD*
Ga0116120_10377421	3300009641	Peatland	WSSTKPVSPRQEQTLEKPGVPPASAQGVMGWVFVPSFVKYEDGSTWIPQSEGECFGVIWRDAQHPDVLALPPRQIEINPD*
Ga0116135_10744272	3300009665	Peatland	AQGVMGWVFVPSFVKYEDGSTWIPQSEGECFGVIWRDAQHPDVLALPPRQIEINPD*
Ga0116101_10347572	3300009759	Peatland	LPAQEQTLEKPGIRSASAQAVLAWVFFPYSLKYEDGNIWRPQSEGECFTVIWRGPRHPEMLALPPRQIEMNPD*
Ga0074044_103066011	3300010343	Bog Forest Soil	EQTLEKPGIRADSAQAVLGWVFFPHSVKYEDGTSWLAQSEGECFDVIWRDQQHPDMPALPPRQIEMNPD*
Ga0134128_126978881	3300010373	Terrestrial Soil	WVFFPYSVTYADGSIWRSQSEGECFHVFWRDKQHPDMPTLPPRQQEMNAD*
Ga0126383_110675301	3300010398	Tropical Forest Soil	KAGAHTSSAQSVLGWVFFPYSIKFEDGSEWRAEREGECFQVIWRDKDHPAMPALPPRQIEIKPD*
Ga0137776_13638382	3300010937	Sediment	VFFPYSVKYTDGSVWQPRGEGECFQVFWRDKGHPEMPALPPRQIEMNPD*
Ga0150983_155309711	3300011120	Forest Soil	PGTQSVIGWVFFPGLITYQDGSTWRPQSEGECFSVIWRDPQHPDVPALPPRQIEINAD*
Ga0181523_108102372	3300014165	Bog	MGPNEEQVIEQPGIPAASAQKILGWVFFPASVKYQDGTEWLPTNEGECFKVIWRDPDHPDLPALPPRQFEINSD*
Ga0181526_108833141	3300014200	Bog	PGIPAASAQKILGWVFFPASVKYQDGTEWLPTNEGECFKVIWRDPDHPDLPALPPRQFEINSD*
Ga0182024_100101581	3300014501	Permafrost	PGIRADSAESVLGWVFFPSSIKYEDGSIWRPQSEGECFNVRWREQPHPDMPVLPPRQIEMNAD*
Ga0182024_127051832	3300014501	Permafrost	STKPISPGQEQTLEKPGVPPASAQAVMGWVFFPSFVKYEDGSTWTPQSEGECFGVIWRDAQHPDVLALPPRQIEINPD*
Ga0137409_105842602	3300015245	Vadose Zone Soil	SVLGWVFFPYSVKYEDGTIWRAQSEGECFGVIWRDPQHPEMLALPPRQIEMNPD*
Ga0187847_1000259321	3300017948	Peatland	KPILPGEELTLEKPGIRAASAQAVEGWVFFPDSVKYQDGSSWQAQSEGECFDVVWREQHHPQLLALPPRQIEMNPD
Ga0187847_101148761	3300017948	Peatland	KPILPGEELTLEKPGIRAASAQAVEGWVFFPDSVKYQDGSSWQAQSEGECFDVIWREQQHPRLLALPPRQIEMNPD
Ga0187810_101951142	3300018012	Freshwater Sediment	WVFFPDSVKYEDGTSWHTQSEGECFDVIWRDRQHPDLPALPPRQIEMNPD
Ga0187889_102923441	3300018023	Peatland	RQEQTLEKPGVPPASAQGVMGWVFVPSFVKYEDGSTWIPQSEGECFGVIWRDAQHPDVLALPPRQIEINPD
Ga0187863_100070501	3300018034	Peatland	VPAASAQSILGWVFFPHSVKYDDGTAWHAQSEGECFDVIWRDQQHPDLPVLPSRQIEMNP
Ga0187883_101929452	3300018037	Peatland	LGWVFFPHSVKYEDGTSWLAQSEGECFDVIWRDQQHPDMPALPPRQIEMNPD
Ga0187871_101100851	3300018042	Peatland	PILPGEELTLEKPGIRAASAQAVEGWVFFPDSVKYQDGSSWQAQSEGECFDVVWREQHHPQLLALPPRQIEMNPD
Ga0187859_103387812	3300018047	Peatland	LPAQEQTLEKPGIRSASAQAVLAWVFFPYSLKYEDGNIWRPQSEGECFTVIWRGPRHPEMLALPPRQIEMNPD
Ga0187772_107619172	3300018085	Tropical Peatland	GWVFFPIAIKYADGTTWHPESEGECFGVVWRDSEHPDMPVLPPRQFEMNPD
Ga0184580_1151551	3300019158	Soil	SQTLEKPGIRAASAQAVLGWVFFPSSVKYEDGSSWRAQSEGECFDVIWRDQEHPDLPALPPRQIEMNPD
Ga0181514_14034912	3300019268	Peatland	PDWPLAKPISPGGEQTLERPGIRAASAQAVLGWVFFPQSVKYEDGTTWLAQTEGECFGVIWRDQQHPDLPALPPRQIEMNAD
Ga0182025_12208092	3300019786	Permafrost	MGWAVFPGSVKYEDGTIWRPQSEGECFHVIWRDPQHPDLPALPPRQIEINPD
Ga0210395_101733701	3300020582	Soil	VFFPSTIKYEDGTSWQPESEGECFAMVWRDRQHPELPVLPTRQFELNPD
Ga0210405_101645391	3300021171	Soil	QEQTLEKPGIRAASAQSVPGWVFFPYSVKYEDGTSWRPQTEGECFTVIWRDPQHPDIPALPTRQIEMNPD
Ga0210388_101279533	3300021181	Soil	VLGWVFFPYSVKYEDGTSWHPQSEGECFTVIWRDPQHPDIPALPTRQIEMNPD
Ga0210388_115824021	3300021181	Soil	PGQEQSLEKPGIRADAARAILGWVFFPHSVKYEDGTSWLAQSEGECFDVIWRDPQHPDMPALPPRQIEMNPD
Ga0210393_112445931	3300021401	Soil	IRADSAQTVLGWVFFPSSIKYEDGSVWRPQNEGECFNVIWRDEPHPDMWALPPRQIEINP
Ga0210387_117514771	3300021405	Soil	WSSAKPILPGQEQTLESPGIRADSARSVLGWVFFPTSVKYQDGSSWRSQSEGECFVVIWRDEQHPDMPALPPRQIEMNAD
Ga0210391_114687511	3300021433	Soil	QTLERPGIRAASAQSVLGWVFFPDAVKFEDGSSWRAQSEGECFKVIWRDPQHPDIPALPPRQIEMNPD
Ga0210398_114954922	3300021477	Soil	LFPASVKYADGISWRAQSEGECFSVLWREQQHPDLPVLPPRQIEMNSDQPRLKK
Ga0212123_104555352	3300022557	Iron-Sulfur Acid Spring	VAGAGAQTILGWAILPSSVKYEDGTSWHAQSEGECFDVIWRDQSHPQILALPPRQIEINP
Ga0222756_10035672	3300022709	Soil	SEWSSDKPILPGQEQTLEKPGIRAASAQSVPGWVFFPYSVKYEDGTSWRPQTEGECFTVIWRDPQHPDIPALPTRQIEMNPD
Ga0242666_10303491	3300022721	Soil	AASAQSVMGWVFFPYSVKYEDGTIWRAQSEGECFEVIWRDRQHPDLPALPPRQIEMNPD
Ga0224561_10019082	3300023030	Soil	RPFNAEWSSSKPILPGEEQTLEKPGIHADSAQAVLGWVFFPSSVKYEDGSTWRAQSEGECFKVIWRDQQHSDLPALPARQIEMNPD
Ga0207416_12679491	3300025134	Iron-Sulfur Acid Spring	ILGWAILPSSVKYEDGTSWHAQSEGECFDVIWRDQSHPQILALPPRQIEINPD
Ga0208193_11101462	3300025463	Peatland	TQSVIGWVFFPGLITYQDGSTWRPQSEGECFSVIWRDPQHPDVPALPPRQIEINAD
Ga0208563_10992652	3300025501	Peatland	PASAQGVMGWVFVPSFVKYEDGSTWIPQSEGECFGVIWRDAQHPDVLALPPRQIEINPD
Ga0209010_10866482	3300027370	Forest Soil	ELALEKPGIRAASAQSVLGWVFFPYLVKYEDGTSWHPQSEGECFRVIWRDQQHFDLPALPTRQIEMNPD
Ga0209332_100000548	3300027439	Forest Soil	MGWVFFPSGMKYQDGSSWHSETEGECFGTIWRDEQHPDMPALPPRQIEMNPDSRTGNA
Ga0209222_10109583	3300027559	Forest Soil	SDKPILPGQELALEKPGIRAASAQSVLGWVFFPYLVKYEDGTSWHPQSEGECFRVIWRDQQHPDLLALPTRQIEMNPD
Ga0209116_11318362	3300027590	Forest Soil	IPAGQEQTLEKPGNRSTSTQPVMGWVFFPTSVKYEDGTTWQPGSEGECFRVFWRDPQHPDMPALPPRQIEMNPD
Ga0209330_10091113	3300027619	Forest Soil	QSVLGWVFFPYLVKYEDGTSWHPQSEGECFRVIWRDQQHFDLPALPTRQIEMNPD
Ga0209446_10956462	3300027698	Bog Forest Soil	VLGWVFFPYSVKYEDGTTWQAQSEGECFSVIWRDQQHPDMPALPPRQIEMNPD
Ga0209038_100165701	3300027737	Bog Forest Soil	QTVLGWVFFPYSVKFDDGTTWLGQSEGDCFDAIWRDAQHPEMLALPPRQMEINPD
Ga0209908_100429551	3300027745	Thawing Permafrost	QEQTLESPGIRADSARSVLGWVFFPTSVKYQDGSSWRSQSEGECFVVIWRDEQHPDMPALPPRQIEMNAD
Ga0209579_100853031	3300027869	Surface Soil	KNILGWVFFPYSVKYADGSEWHSQSEGECFKVIWRDPEHPNVPALPPRQREINAD
Ga0209169_102558242	3300027879	Soil	QAVLGWVFFPNAVKFEDGTTWHAQSEGECFDVIWRDQQHPDLPALPPRQIEMNPD
Ga0265355_10219222	3300028036	Rhizosphere	TKTIPPGEEETMERPGLGSEGSQSVLGWVFFPSSIKYEDGSLWHPESEGECFTVIWRDPQHPDLPALPPRQIEMNPD
Ga0302224_100992321	3300028759	Palsa	SSANPIFPAQEQTLEKPGIRSASAQAVLAWVFFPYSLKYEDGNIWRPQSEGECFTVIWRGPQHPEKLALPPRQIEMNPD
Ga0302269_11712362	3300028766	Bog	RRPYNSEWTSAQPIRPGQEQTLEKPGASAQRAQAVLGWVFFPSSINYEDGSTWRPQSEGECFTVIWRDPQHPETLALPPRQIEINPD
Ga0302231_103417711	3300028775	Palsa	GIRAASAQSVLGWVFFPYSVKYEDGSSWHPQSEGECFTVIWRDPQHPEMLALPPRQIEMNPD
Ga0302227_102057321	3300028795	Palsa	TLEKPGIRAASAQGVLGWVFFPHSVKYEDGTSWLAQSEGECFDVIWRDEQHPDMPALPARQIEMNPD
Ga0302222_100282294	3300028798	Palsa	KPGIRSASAQAVLAWVFFPYSLKYEDGNIWRPQSEGECFTVIWRGPQHPEKLALPPRQIEMNPD
Ga0302222_100413462	3300028798	Palsa	PGQAQTLERPGIQAASAQSVLGWVFFPHSVKYEDGTTWHAQSEGECFDVIWRDQQHPDLPALPSRQIEMNPD
Ga0302229_102487461	3300028879	Palsa	PFMGEWSSKKPILPGEEQVLEKPGIRAEGAQAVMGWAFFPGSIKYDDGTFWRPQNEGECFKVIWRDPQHPDIPALPPRQIEINPD
Ga0311368_103340832	3300029882	Palsa	ILPGQEQTLEKPGFRADSAQAVLGWVFFPHSVKFADGTSWLAQSEGECFDVIWRDQQHPDLLALPPRQIEMNPD
Ga0311352_109103761	3300029944	Palsa	SVLGWVFFPYSVKYEDGSSWHPQSEGECFTVIWRDPEHPHLPALPPRQIEMNPD
Ga0311346_103649843	3300029952	Bog	PGQEQTIEKPGIRAESAQTVMGWVFFPSLIKFDDGSVWRPQGEGECFNVIWRDAQHPELMALPPRQSEMNPD
Ga0311338_105004381	3300030007	Palsa	VRAASAAAVMGWTFFPATVKFDDGTLWRPQSEGECFQVIWRDPQHPDLPVLPPRQVEINP
Ga0311338_116152702	3300030007	Palsa	LGWVFFPYMVKFEDGTTWHAQSEGECFDAIWRDAQHPDMLALPPRQMEINPD
Ga0302306_100170392	3300030043	Palsa	PFNSEWSSAKPISPGQAQTLERPGIQAASAQSVLGWVFFPHSVKYEDGTTWHAQSEGECFDVIWRDQQHPDLPALPSRQIEMNPD
Ga0311370_120943102	3300030503	Palsa	QTLEKSGIRASSAQTVLGWVFFPYMVKFEDGTTWHAQSEGECFDVIWRDAQHPDMLALPARQMEINPD
Ga0302275_100700796	3300030518	Bog	GWVFFPSSINYEDGSTWRPQSEGECFTVIWRDPQHPETLALPPRQIEINPD
Ga0302275_105650882	3300030518	Bog	TKPILPGQEQTIEKPGIRAESAQTVMGWVFFPSLIKFDDGSVWRPQGEGECFNVIWRDAQHPELMALPPRQSEMNPD
Ga0311357_110097441	3300030524	Palsa	AKPIPPGQEQTLEKPGIRAASSQSVLGWVFFPYSVKYEDGTSWHPQSEGECFTVIWRDPQHPEMLALPPRQIEMNPD
Ga0311355_109108561	3300030580	Palsa	WVSAKPILPGQEQTLEKPGIRAASAQGVLGWVFFPHSVKYEDGTSWLAQSEGECFDVIWRDEQHPDMPALPARQIEMNPD
Ga0311354_111703832	3300030618	Palsa	NLRWGTTKPIGPGQEQTIEEPGLSPEGAATIMGWVFFPATVKYEDNSTWRPEKEGECFHVIWRDPQHPDMPALPPRQIEINPD
Ga0302311_100707173	3300030739	Palsa	MGWAFFPGSIKYDDGTFWRPQNEGECFKVIWRDPQHPDIPALPPRQIEINPD
Ga0302312_104094142	3300030746	Palsa	STTKPILPGQEQTIEKPGIRAESAQTVMGWVFFPSLIKFDDGSVWRPQGEGECFNVIWRDAQHPELMALPPRQSEMNPD
Ga0265760_101204741	3300031090	Soil	AKPILPGQEQTLERPGIRADSARSVLGWVFFPSSVKYQDGSSWHSQSEGECFVVIWRDEKHPDMPALPPRQIEMNAD
Ga0170824_1063846672	3300031231	Forest Soil	VFFPYSVKYEDGTIWRAQNEGECFGVIWRDSQHPEMPALPPRQIEMNPD
Ga0310686_1038705672	3300031708	Soil	GQEQTLESPGIRADSARSVLGWVFFPTSVKYQDGSSWRSQSEGECFVVIWRDEQHPDMPALPPRQIEMNAD
Ga0310686_1062778241	3300031708	Soil	PGQEQTLESPGIRADSARSVLGWVFFPTSVKYQDGSSWRSQSEGECFVVIWRDEQHPDMPALPPRQIEMNAD
Ga0307476_106383592	3300031715	Hardwood Forest Soil	LEKPGIPPASAKNILGWVFFPYSVKYEDGTEWHSQSEGECFKVIWRDPEHPDVPALPPRQREINAD
Ga0307478_109842812	3300031823	Hardwood Forest Soil	ASAQAVMGWVFFPSSVKFEDGTTWLPQSEGECFHIFWRDPGHPDLPVLPPRQIEMNPD
Ga0316039_1041311	3300031891	Soil	GIRAASAQAVLGWVFFPSSVKYEDGSSWRAQSEGECFDVIWRDQEHPDLPALPPRQIEMNPD
Ga0348332_114822952	3300032515	Plant Litter	ADSAQAVLGWVFFPSSVKYEDGSAWRPQSEGECFKVIWRDQQHPDLPALPARQIEMNPD
Ga0335082_101654164	3300032782	Soil	FPSSIKYADGTEWVPEPDGECFKAIWRDPQHPDMPALPPLQLEINSD
Ga0335079_101501031	3300032783	Soil	AQSVVGWVLFPYSIKYEDGSTWQSQKEGECAKIFWRDKEHPELPALPPRQIEMNPD
Ga0335078_109279302	3300032805	Soil	EWSSSKQLLPGQEQTLEKPGIRAASAQSILGWVFFPYSVKYEDGTSWHSQNEGECFGVVWRDPQHPDMPALPPRQIEMNPD
Ga0335080_104182971	3300032828	Soil	WTLFPYSLTYADGGTWISRHEGECMKVFWRDKEHPELPVLPPRQIEMNPD
Ga0335080_108821152	3300032828	Soil	RGLIPPGQEQHLEKPGMQSASAQSVMGWVFFPYSITYQDGSNWRSQKEGECMKIFWRDNEHPELPALPPRQIELNPD
Ga0335081_127342652	3300032892	Soil	ASSAQSVVGWVLFPYSIKYEDGSTWQSQKEGECAKIFWRDKEHPELPALPPRQIEMNPD
Ga0335083_108011442	3300032954	Soil	EMLLAPLDLRRPFNAEWQWNKPIAAGQEQVLERPGARVASAEGIEGWVLVPSIVKYEDGTSWHPQSEGECFGVIWRDAQHPEMPVLPNRQFEMKSD
Ga0335077_105502262	3300033158	Soil	GTIPAGQEHTLTKPGMQASSAQSVVGWVLFPYSIKYEDGSTWQSQKEGECAKIFWRDKEHPELPALPPRQIEMNPD
Ga0370515_0333480_380_640	3300034163	Untreated Peat Soil	RPFNAEWSSAKPILPGQEQTLERPGIRADSAQAILGWVFFPSSVKYEDGTSWRPQSEGECFKVIWRDQEHPDLPVLPPRQIEMNPD
Ga0370514_184003_385_543	3300034199	Untreated Peat Soil	MGWVFFPSLIKFDDGSVWRPQSEGECFNVIWRDAQHPELMGLPPRQSEMNPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094157

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences