Metagenome / Metatranscriptome Family F094197

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094197
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	86 residues
Representative Sequence	MKNLMTPNITLVIVLLAAMAAVALRAAARRPEPRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA
Number of Associated Samples	78
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	91.51 %
% of genes near scaffold ends (potentially truncated)	16.04 %
% of genes from short scaffolds (< 2000 bps)	83.02 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.660 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.792 % of family members)
Environment Ontology (ENVO)	Unclassified (33.019 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.472 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 37.07% β-sheet: 0.00% Coil/Unstructured: 62.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00296	Bac_luciferase	2.83
PF00196	GerE	1.89
PF12867	DinB_2	1.89
PF07366	SnoaL	1.89
PF08044	DUF1707	0.94
PF00805	Pentapeptide	0.94
PF08241	Methyltransf_11	0.94
PF07617	DUF1579	0.94
PF07690	MFS_1	0.94
PF00441	Acyl-CoA_dh_1	0.94
PF08818	DUF1801	0.94
PF07045	DUF1330	0.94
PF03080	Neprosin	0.94
PF01471	PG_binding_1	0.94
PF13411	MerR_1	0.94
PF01850	PIN	0.94
PF04140	ICMT	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.83
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.94
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.94
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.94
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.94
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.66 %
Unclassified	root	N/A	44.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.66 %
Unclassified	root	N/A	44.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.66 %
Unclassified	root	N/A	44.34 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.89 %
Unclassified	root	N/A	44.34 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.06 %
Unclassified	root	N/A	44.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.98 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.34 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.89 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.89 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	1.89 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.94 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.34 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.89 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.94 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.94 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.94 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.34 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	1.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.89 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.94 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.94 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.94 %
Acrocarpospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.34 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1.89 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.94 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.94 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.94 %
Acrocarpospora macrocephala	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	0.94 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.34 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1.89 %
Kribbella sp. VKM Ac-2568	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2568	0.94 %
Streptomyces sp. CNQ-525	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNQ-525	0.94 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.94 %
Acrocarpospora macrocephala	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	0.94 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig20204	Not Available	702	Open in IMG/M
3300003505\|JGIcombinedJ51221_10017798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2450	Open in IMG/M
3300003505\|JGIcombinedJ51221_10035116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1846	Open in IMG/M
3300003505\|JGIcombinedJ51221_10190674	Not Available	831	Open in IMG/M
3300003505\|JGIcombinedJ51221_10208980	Not Available	792	Open in IMG/M
3300004080\|Ga0062385_10584898	Not Available	703	Open in IMG/M
3300005327\|Ga0070658_10552175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300005332\|Ga0066388_100206866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2586	Open in IMG/M
3300005436\|Ga0070713_101304445	Not Available	703	Open in IMG/M
3300005437\|Ga0070710_10486348	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300005445\|Ga0070708_100212753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1812	Open in IMG/M
3300005467\|Ga0070706_101942444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	533	Open in IMG/M
3300005468\|Ga0070707_100084574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3065	Open in IMG/M
3300005471\|Ga0070698_100374280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1357	Open in IMG/M
3300005602\|Ga0070762_10646445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNQ-525	706	Open in IMG/M
3300005610\|Ga0070763_10033438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2366	Open in IMG/M
3300005610\|Ga0070763_10091438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300005921\|Ga0070766_10047279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2407	Open in IMG/M
3300006059\|Ga0075017_101004553	Not Available	650	Open in IMG/M
3300006086\|Ga0075019_10332499	Not Available	920	Open in IMG/M
3300006175\|Ga0070712_100965301	Not Available	737	Open in IMG/M
3300009520\|Ga0116214_1022076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2273	Open in IMG/M
3300009521\|Ga0116222_1193301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300009525\|Ga0116220_10185421	Not Available	899	Open in IMG/M
3300009792\|Ga0126374_10342159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300010046\|Ga0126384_11254492	Not Available	686	Open in IMG/M
3300010341\|Ga0074045_10461608	Not Available	819	Open in IMG/M
3300010359\|Ga0126376_10066497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2618	Open in IMG/M
3300010359\|Ga0126376_10228700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1565	Open in IMG/M
3300010360\|Ga0126372_12432524	Not Available	574	Open in IMG/M
3300010366\|Ga0126379_13408523	Not Available	532	Open in IMG/M
3300010376\|Ga0126381_100784276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1367	Open in IMG/M
3300010379\|Ga0136449_101287010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1141	Open in IMG/M
3300010379\|Ga0136449_102298797	Not Available	782	Open in IMG/M
3300011120\|Ga0150983_11669587	All Organisms → cellular organisms → Bacteria → Terrabacteria group	721	Open in IMG/M
3300012361\|Ga0137360_11781310	Not Available	521	Open in IMG/M
3300012363\|Ga0137390_10796098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300015372\|Ga0132256_100799559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1059	Open in IMG/M
3300017924\|Ga0187820_1044094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1192	Open in IMG/M
3300018007\|Ga0187805_10322466	Not Available	712	Open in IMG/M
3300018060\|Ga0187765_10857641	Not Available	611	Open in IMG/M
3300020580\|Ga0210403_10162869	Not Available	1826	Open in IMG/M
3300020580\|Ga0210403_11013892	Not Available	649	Open in IMG/M
3300020581\|Ga0210399_10303894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1331	Open in IMG/M
3300020581\|Ga0210399_11339596	Not Available	562	Open in IMG/M
3300020581\|Ga0210399_11599525	Not Available	502	Open in IMG/M
3300020582\|Ga0210395_10067931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2618	Open in IMG/M
3300020582\|Ga0210395_10282845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300020582\|Ga0210395_10355849	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1101	Open in IMG/M
3300020582\|Ga0210395_10358131	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300020582\|Ga0210395_10974106	Not Available	629	Open in IMG/M
3300020583\|Ga0210401_10145355	All Organisms → cellular organisms → Bacteria	2217	Open in IMG/M
3300020583\|Ga0210401_10513709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300021171\|Ga0210405_10792374	Not Available	727	Open in IMG/M
3300021171\|Ga0210405_10828804	Not Available	707	Open in IMG/M
3300021171\|Ga0210405_10858516	Not Available	692	Open in IMG/M
3300021180\|Ga0210396_10394178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300021180\|Ga0210396_11425460	Not Available	572	Open in IMG/M
3300021401\|Ga0210393_10247697	Not Available	1445	Open in IMG/M
3300021401\|Ga0210393_10500474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	992	Open in IMG/M
3300021401\|Ga0210393_10960993	Not Available	692	Open in IMG/M
3300021402\|Ga0210385_10217497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1394	Open in IMG/M
3300021403\|Ga0210397_10072338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2568	2264	Open in IMG/M
3300021403\|Ga0210397_10168294	Not Available	1545	Open in IMG/M
3300021405\|Ga0210387_10146625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2016	Open in IMG/M
3300021406\|Ga0210386_10124936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2131	Open in IMG/M
3300021406\|Ga0210386_10429074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300021406\|Ga0210386_10522175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300021407\|Ga0210383_10636400	Not Available	918	Open in IMG/M
3300021432\|Ga0210384_10937716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300021474\|Ga0210390_10745442	Not Available	814	Open in IMG/M
3300021475\|Ga0210392_10486260	Not Available	908	Open in IMG/M
3300021475\|Ga0210392_10782076	Not Available	712	Open in IMG/M
3300021478\|Ga0210402_10476303	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1159	Open in IMG/M
3300021478\|Ga0210402_10632936	Not Available	990	Open in IMG/M
3300021559\|Ga0210409_10173528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1970	Open in IMG/M
3300021560\|Ga0126371_11397844	Not Available	831	Open in IMG/M
3300022523\|Ga0242663_1044577	Not Available	763	Open in IMG/M
3300022709\|Ga0222756_1039028	Not Available	680	Open in IMG/M
3300022724\|Ga0242665_10206270	Not Available	650	Open in IMG/M
3300025898\|Ga0207692_10379702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300025915\|Ga0207693_10803592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300025922\|Ga0207646_10129520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2270	Open in IMG/M
3300025932\|Ga0207690_10270929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300026551\|Ga0209648_10436113	Not Available	826	Open in IMG/M
3300027030\|Ga0208240_1012578	Not Available	891	Open in IMG/M
3300027109\|Ga0208603_1004575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2301	Open in IMG/M
3300027497\|Ga0208199_1024298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300027604\|Ga0208324_1073279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300027783\|Ga0209448_10183897	Not Available	695	Open in IMG/M
3300027855\|Ga0209693_10133093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1229	Open in IMG/M
3300027855\|Ga0209693_10428661	Not Available	637	Open in IMG/M
3300027884\|Ga0209275_10176163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1146	Open in IMG/M
3300027898\|Ga0209067_10760847	Not Available	564	Open in IMG/M
3300030494\|Ga0310037_10106181	Not Available	1299	Open in IMG/M
3300031446\|Ga0170820_16622092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora macrocephala	587	Open in IMG/M
3300031708\|Ga0310686_105337289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2267	Open in IMG/M
3300031708\|Ga0310686_113447642	All Organisms → cellular organisms → Bacteria	8987	Open in IMG/M
3300031715\|Ga0307476_11281756	Not Available	535	Open in IMG/M
3300031805\|Ga0318497_10790401	Not Available	532	Open in IMG/M
3300032160\|Ga0311301_10074398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7094	Open in IMG/M
3300032160\|Ga0311301_10957262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1141	Open in IMG/M
3300032160\|Ga0311301_11146451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300032783\|Ga0335079_10916674	Not Available	899	Open in IMG/M
3300032955\|Ga0335076_10809281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300033134\|Ga0335073_10264711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2085	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.17%
Host-Associated	Host-Associated	2.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.57%
Aquatic	Environmental → Aquatic	6.60%
Plants	Host-Associated → Plants	2.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.57%
Freshwater	Environmental → Aquatic → Freshwater	3.77%
Sediment	Environmental → Aquatic → Sediment	2.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.26%
Loam	Environmental → Terrestrial → Soil → Loam	23.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.83%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.83%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00383790	2166559006	Grass Soil	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA
JGIcombinedJ51221_100177982	3300003505	Forest Soil	MKNLITPNITVALVLLGAMAAVALRATAKRPEPRRASSAGSAPFTVTTPGPRGRPAGAVEQMQDVFHELHAAGRNAACTVCDVQYWPT*
JGIcombinedJ51221_100351161	3300003505	Forest Soil	NVTVAVVLLAAMAAVALRVSVRRPAPRWAPGAESAPIAVRTPSPPGRPASVATQMQDIFHELHADGRNAACTVCDRQYWPL*
JGIcombinedJ51221_101906742	3300003505	Forest Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPAPRWAPGTESAPIAMRTPSSPGRLASVAEQMQDIFHELHADGRNAACTVCEHQYWPS*
JGIcombinedJ51221_102089802	3300003505	Forest Soil	MKNLMTPNITLAVVLLAAMAAVALRAAARRPEPRWAPGAESAPITVRTPGPPGRPSSVVEQMQDIFHELHADGRNAACTVCDSQYWPA*
Ga0062385_105848981	3300004080	Bog Forest Soil	LMTPNIALAIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA*
Ga0070658_105521752	3300005327	Corn Rhizosphere	MKNVMTPNITLAIVLVAAMAAVALRATARRPEPRWASGGSAPAAVRTPGSPGRPASVVEQMQDIFHELHADGRNAVCTVCDSQYRLA*
Ga0066388_1002068662	3300005332	Tropical Forest Soil	MMKNMTPHTTLAIVLVAAMAAVALRAAARQPEPRWAPGAGSAPVAVRTPGFRGPPASATQQMQDIFHELHADGRHAVCTVCDSQHRLA*
Ga0070713_1013044451	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKNVMTPNITLAIVLVAAMAVVVLRAAARRPEPRWASGAGSAPIALRTPSSPGRPASAAEQMQDIFHELHPEGRNAVCTVCDSQYRLA*
Ga0070710_104863481	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKNVMTPNITLAIVLVAAMAAVALRATVRRPEPRWASGAESAPIALMIPSSPGRPASAAKQMQDIFHELHPEGRHAVCTVCDSQYRLA*
Ga0070708_1002127532	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWLA*
Ga0070706_1019424441	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTRYREQAAMAAFGLRAAARRPEPRWAPGAESAPIAVRAPSSPGRPASVVEQMQDIFHELHADGRNAACTVCDSQYWSA*
Ga0070707_1000845744	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDGQYWLA*
Ga0070698_1003742803	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWSA*
Ga0070762_106464451	3300005602	Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPAPRWAPGAESAPIAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS*
Ga0070763_100334382	3300005610	Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPASRWAPGTESAPIAVRTPSPPDRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS*
Ga0070763_100914382	3300005610	Soil	MKNLMTPNTTLALVLLAAMAAVALRAAARRPEPRQASGAGSAPFTVRTPGPPGRPASAVEQMQDVFHELHADGRNAACTVCDVQYWPATKCWSRSLTQEEMRKL*
Ga0070766_100472792	3300005921	Soil	MKNLITPNISLALVLLAAMAAVALRAVARRPEPRRASGAGSAPITVRRPGPPARPTGTVEQTQDVFHELHADGRNAACTVCDGQYWPA*
Ga0075017_1010045532	3300006059	Watersheds	MKNLMTPNITLAIVLLAAMAAVALRAAARRPEPRWAPGAESAPITVRTPGPPGRPSSVVEQMQDIFHELHADGRNAACTVCDSQYWLA*
Ga0075019_103324992	3300006086	Watersheds	MKNLMTPNITLVIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA*
Ga0070712_1009653012	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKNVMTPNITLAIVLVAAMAAVALRATARRPEPRWASGAESAPIALRTPNSPGRLASAAEQVQDIFHELHPDGRNAVCTVCDSQYRLA*
Ga0116214_10220761	3300009520	Peatlands Soil	MKNLMTPNITLVIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSKYWPA*
Ga0116222_11933013	3300009521	Peatlands Soil	MKNLMTPNITLVIVLLAAMAAIALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA*
Ga0116220_101854211	3300009525	Peatlands Soil	MKNLMTPNITLVIVLLAAMAAIALRAAARRPETRWAPGAESAPITVRTPGPPGRPASVVEQMHDIFHELHADGRNAACTVCDSKYWPA*
Ga0126374_103421591	3300009792	Tropical Forest Soil	MKNMTPHTTLAIVLVAAMAAVALRAATRQPEPRWAPGAGSAPIAVRTPGSPRRPVSGAKQMQDIFHELHADGRNA
Ga0126384_112544921	3300010046	Tropical Forest Soil	TLAIVLVAAMAAVVLRAATRQPEPRWAPGAGSAPVTVRTPGFRGTPASATEQMQDIFHELHADGRHAVCTVCDSQHRLA*
Ga0074045_104616082	3300010341	Bog Forest Soil	MKNLMTPNIALAIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA*
Ga0126376_100664971	3300010359	Tropical Forest Soil	MKNMPPHTTLAIVLVAAMAAVALRAAARQPEPRWAPGAGSAPVAVRTPGFRGPPASATQQMQDIFHELHADGRHAVCTVCDSQHRLA*
Ga0126376_102287001	3300010359	Tropical Forest Soil	MKNLMPPNITVAVVLVAAMAAVALRAAARRPEPRWTPGAGSAPIAVRTPGSPGRPVSAAEQMQDIFHELHADGRNAACTVCDDQYRPA*
Ga0126372_124325241	3300010360	Tropical Forest Soil	TLAIVLVAAMAAVALRAAARQPEPRWAPGAGSAPVAVRTPGFRGPPASATQQMQDIFHELHADGRHAVCTVCDSQHRLA*
Ga0126379_134085231	3300010366	Tropical Forest Soil	MMKNMTPHTTLAIVLVAAMAAVALRAATRQPEPRWAPGAGSAPVTVRTPGFRGPPASATQQMQDIFHELHADGRHAVCTVCDSQHRLA*
Ga0126381_1007842763	3300010376	Tropical Forest Soil	MKNLMTPNITLTIVLLAAMAAAALRAVARRPEPRWTPDSGSAPTPGSPGRSASAVEQMQDIFHELHADGRNAACTVCDGQYRPA*
Ga0136449_1012870102	3300010379	Peatlands Soil	MKNLMTRNITPALVLLGAMAAVALRAAARRPEPRWASGAESATITVRTPGHPGRPASAVKQMQDIFHELHADGRNAACTVCDGLYWSVEGQ*
Ga0136449_1022987971	3300010379	Peatlands Soil	MKNLITPNTTLALALLAAMAAVALRAAARRPEPRWASGAESAPITVRPPGPPGRPASTVEQMQDIFHELHADGRNAACTVCDGQYWSA*
Ga0150983_116695872	3300011120	Forest Soil	MKNLVTPNVTLAIVLLAAMAALALRAAVRRPAPRWAPGTESAPIAMRTPSSPGRLASVAEQMQDIFHELHADGRNAACTVCEHQYWPS*
Ga0137360_117813101	3300012361	Vadose Zone Soil	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPTSAVEQMQDIFHELHADGRNAACTVCDSQYWLA*
Ga0137390_107960981	3300012363	Vadose Zone Soil	MKNLMTPNITLAIVLLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPANAVEQMQDIFHELHADGRNAACTVCDSQYWSA*
Ga0132256_1007995592	3300015372	Arabidopsis Rhizosphere	MKNLMTPNITLAIVLAAAMTAVALRAAARRPEPRWASGAGSAPVAVKIPGSPGRPASVVEQMQDIFHELHADGRNAVCTVCDSQYRLA*
Ga0187820_10440943	3300017924	Freshwater Sediment	MKNLITPNMTLALVLVAAMAAVALRAAVRRPEPRSASWAGSAPITVRTLGPPGRPAGAVEQTQDVFHELHADGRNAACTVCDGQYRSA
Ga0187805_103224661	3300018007	Freshwater Sediment	MKNLITPNMTLALVLVAAMAAVALRAAVRRPEPRSASWAGSAPITVRTLGPPGRPAGAVEQMQDVFHELHADGRNAACTVCDGQYRSA
Ga0187765_108576412	3300018060	Tropical Peatland	MKNVMTPNITLAIVFLAAIAADALRAAARRPEPRWASGAESVPIAVRTPGSAGRTATAVEQMQDIFHELHADGRHAACTVCDSHYWSA
Ga0210403_101628691	3300020580	Soil	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWLA
Ga0210403_110138921	3300020580	Soil	MKNLITPNITLALVLLGAMAAVALRAAVRRPEPRRASGAGSAPFTVRTPGPPGRPTGAVEQMQDVFHELHADGRNAACTVCDVQYWPA
Ga0210399_103038942	3300020581	Soil	MKNLITPNITLALVLLGAMAAVALRAAARRPEPRRASSAGSVPFAVTTPGPPGRPAGAVEQMQDVFHELHAAGRNAACTVCDVQYWPT
Ga0210399_113395961	3300020581	Soil	MKNMMTPQITLAIVLVAAMAAVALRAAARRPEPRWAPGAGSVPVAVRPPDFRGPPASATEQMQDIFHELHADGRHAVCTV
Ga0210399_115995252	3300020581	Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPASRWAPGTESAPIAVRTPSPPDRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0210395_100679314	3300020582	Soil	MKNLMTPNITLPPVLLAAMAAVALRAAARRLEPRWASGAESAPVTVRTPGPQGRPASAVEQMQDIFHELHADGRNAACTVCDGHYWPA
Ga0210395_102828451	3300020582	Soil	MKNLITPNMTLALVLLAAMAAVALRTAARRPEPRRASGAGSAPFTVRTPGRPAGAVEQMQDVFHELHADGRNAACTVCDVQYWPA
Ga0210395_103558491	3300020582	Soil	MKNLVTPNVTLAIGLLAAMAAVALRAAVRRPAPRWAPGTESAPSAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0210395_103581311	3300020582	Soil	MKNLVTPNVTLAIVLLAAMAALALRAAVRRPAPRWAPGTESAPIAVRTPSSPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0210395_109741061	3300020582	Soil	MKNMMTPQITLAIVLVAAMAAVALRAAARRPEPRWAPGAGSVPVAVRPPDFRGPPASATEQMQDIFHELHADGRHAVCTVCDSQYRLA
Ga0210401_101453554	3300020583	Soil	MKNLVTPNVTLRIVLLAAMAAVVLRAAVRRPAPRWAPGTESAPIAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0210401_105137092	3300020583	Soil	MKNLMTPNITLPPVLLAAMAAVALRAAARRLEPRWASGAESAPVTVRTPGPQGRPASAVEQMQDIFHELHADGRNAACTVCDGQYWPA
Ga0210405_107923741	3300021171	Soil	MKNLMTPNTTLAIVLLAAMAAVALRAAARRPEPRWAPGAESAPTAVRTPGYPGRPANAVEQMQDIFHELHADGRNAACTVCDSQYWLA
Ga0210405_108288041	3300021171	Soil	MKNLMTPNITLPHVLLAAVAAVALRTAARRLEPRWASGAESAPITVRTPGPPARPARAVEQMQDIFHELHPDGRNAACTVCDSQYWPA
Ga0210405_108585161	3300021171	Soil	MKNLMTPSITLAIVFLAAMAAVALRAAAKRPEPRWAPGAESAPIAVRTLGSPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA
Ga0210396_103941783	3300021180	Soil	MKNLMTPNITLPPVLLAAMAAVALRAAARRLGPRWASGAESAPVTVRTPGPQGRPASAVEQMQDIFHELHAD
Ga0210396_114254601	3300021180	Soil	MKNLITPNMTLALVLLAAMAAVALRAAARRPEPRRASGAGSAPFTVRTPGPPGRPAGAVEQMQDVFHELHADGRNAACTVCDVQYWPA
Ga0210393_102476972	3300021401	Soil	MKNLITPNMTLALVLLAAMTAVALRAAARRPEPRPASGAGSAPFTVRTPGPPGRPASTVEQMQDVFHELHADGRNAACTVCDVQYWPA
Ga0210393_105004742	3300021401	Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPASRWAPGTESAPIAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0210393_109609931	3300021401	Soil	MKNLVTPNVTLAIVLLAAMAALALRAAVRRPAPRWAPGTESAPIAVRTPSSPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYW
Ga0210385_102174971	3300021402	Soil	MKNLITPNMTLALVLLAAMAAVALRAAARRPEPRRASGAGSAPFTVRTPGPPGRPAGAVEQMQDVFHELHADGRNAACTVCDVQYWTSQTVQAAL
Ga0210397_100723381	3300021403	Soil	MKNMMTPQITLAIVLVAAMAAVALRAAARRPEPRWAPGAGSVPAAVRPPDFRGPPASATEQMQDIFHELHADGRHAVCTVCDSQYRLA
Ga0210397_101682942	3300021403	Soil	MKNMMTPHITLAIVLVTAMAAVALHAAARRPEPRRAPGAGSVPAAVRPPDFRGPPASATGQMQDIFHELHADGRHAVCTVCDSRYRLA
Ga0210387_101466252	3300021405	Soil	MKNLITPNITLALVLLGAMAAVALRAAARRPEPRRASSAGSAPFTVTTPGPPGRPAGAVEQMQDVFHELHAAGRNAACTVCDVQYWPT
Ga0210386_101249365	3300021406	Soil	MKNLVTPNVTLRIVLLAAMAAVVLRAAVRRPAPRWTPGTESAPIAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0210386_104290742	3300021406	Soil	MKNLMTPNITLPPVLLAAMAAVALRAAARRLGPRWASGAESAPVTVRTPGPQGRPASAVEQMQDIFHELHADGRNAACTVCDGQYWPA
Ga0210386_105221752	3300021406	Soil	MKNLITPNITLALVLLGAMAAVALRAAARRPEPRRASSAGSAPFTVTTPGPPGRPAGAVEQMQDVFHELHADGRNAACTVCDVQYWPA
Ga0210383_106364001	3300021407	Soil	MKNLVTPNVTLAVLLAAMAAVALRAAVRRPAPRWAPGTESAPSAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0210384_109377161	3300021432	Soil	MKNVMTPNITLAIVLLAAMAAIALRAAARRPEPRWAPGAESAPIAVRTPGSPGRSANAVEQMQDIFHELHADGRNASCTVCDSQYWSA
Ga0210390_107454421	3300021474	Soil	MKNIMTPQITLAIVLVAAMAAVALRAAARRPEPRWAPGAGSVPVAVRPPDFRGPPASATEQMQDIFHELHADGRHAVCTVCDSQYRLA
Ga0210392_104862602	3300021475	Soil	MKNLMTPNTTLAIVLLAAMAVVALRAAAARRPEPRWAPGAESAPNAVEQMQDIFHELHADGRNAACTVCDSQYWLA
Ga0210392_107820762	3300021475	Soil	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPVAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWLA
Ga0210402_104763031	3300021478	Soil	NTTLAIVLLAAMAVVALRAAAARRPEPRWAPGAQSAPNAVEQMQDIFHELHADGRNAACTVCDSQYWLA
Ga0210402_106329361	3300021478	Soil	MKNLMTPSITLAIVFLAAMAAIALRAAARRPEPRWAPGAESAPVAVRTPGSPGRRASAVEQMQDIFHELHADGRNAACTVCDSQYWLA
Ga0210409_101735281	3300021559	Soil	MKNLMTPNITLPHVLLAAVAAVALRTAARRLEPRWASGAESAPITVRTPGPPARPARAVEQMQDIFHELHADGR
Ga0126371_113978441	3300021560	Tropical Forest Soil	MKNLMTPNITLTIVLLAAMAAAALRAVARRPEPRWTPDSGSAPTPGSPGRSASAVEQMQDIFHELHADGRNAACTVCDGQYRPA
Ga0242663_10445771	3300022523	Soil	MKNLVTPNVTLRIVLLAAMAAVALRAAVRRPAPRWTPGTESAPIAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0222756_10390281	3300022709	Soil	MKNLVTPNVTLAIVLLAAVAALALRAAVRRPAPRWAPGTESAPIAVRTPSSPGRPASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0242665_102062702	3300022724	Soil	MKNLMTPNITLPPVLLAAMAAVALRAAVRRLEPRWASGAESAPITVRTPGPPGRPARAVEQMQDIFHELHADGRNAACTVCDGQYWPA
Ga0207692_103797022	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKNVMTPNITLAIVLVAAMAAVALRATVRRPEPRWASGAESAPIALMIPSSPGRPASAAKQMQDIFHELHPEGRHAVCTVCDSQYRLA
Ga0207693_108035922	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PNITLAIVLVAAMAVVVLRAAARRPEPRWASGAGSAPIALRTPSSPGRPASAAEQMQDIFHELHPEGRNAVCTVCDSQYRLA
Ga0207646_101295204	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPFAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDGQYWLA
Ga0207690_102709291	3300025932	Corn Rhizosphere	MKNVMTPNITLAIVLVAAMAAVALRATARRPEPRWASGGSAPAAVRTPGSPGRPAGVVEQMQDIFHELHADGRNAVCTVCDSQYRLA
Ga0209648_104361131	3300026551	Grasslands Soil	MKNLITPNITLALVLLAAMAAVALRAAARRPEPRWASGAGSAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDGQYRSA
Ga0208240_10125781	3300027030	Forest Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPAPRWAPGTESAPIAMRTPSSPGRLASVAEQMQDIFHELHADGRNAACTVCEHQYWPS
Ga0208603_10045752	3300027109	Forest Soil	MKNLITPNITVALVLLGAMAAVALRATAKRPEPRRASSAGSAPFTVTTPGPRGRPAGAVEQMQDVFHELHAAGRNAACTVCDVQYWPT
Ga0208199_10242981	3300027497	Peatlands Soil	MKNLMTPNITLVIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSKYWPA
Ga0208324_10732793	3300027604	Peatlands Soil	MKNLMTPNITLVIVLLAAMAAVALRAAARRPEPRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVC
Ga0209448_101838971	3300027783	Bog Forest Soil	MKNLMTPNIALAIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA
Ga0209693_101330932	3300027855	Soil	MKNLMTPNTTLALVLLAAMAAVALRAAARRPEPRQASGAGSAPFTVRTPGPPGRPASAVEQMQDVFHELHADGRNAACTVCDVQYWPATKC
Ga0209693_104286611	3300027855	Soil	MKNLITPNITLALVLLGAMAAVALRAAARRPEPRRASSAGSAPLTVTTPGPPGRPAGAVEQMQDVFHELHADGRNAACTVCDVQYWPT
Ga0209275_101761632	3300027884	Soil	MKNLITPNISLALVLLAAMAAVALRAVARRPEPRRASGAGSAPITVRRPGPPARPTGTVEQTQDVFHELHADGRNAACTVCDGQYWPA
Ga0209067_107608471	3300027898	Watersheds	MKNLMTPNITLVIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA
Ga0310037_101061811	3300030494	Peatlands Soil	MKNLMTPNITLVIVLLAAMAAVALRAAARRPEPRWAPGAGSAPVAVRTPGPPGRPASVVEQMQDIFHELHADGRNAACTVCDSKYWPA
Ga0170820_166220921	3300031446	Forest Soil	MKNLMTPSITLAIVFLAAMAAVALRAAARRPEPRWAPGAESAPIAVRTPGSPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWQA
Ga0310686_1053372893	3300031708	Soil	MKNLMTPNITLPHVLLAAMAAVALRAAARRLQPRWASGAGSAPITVRTPGPPGRQARAVEQMQDIFHELHADGRNAACTVCDGQYWPA
Ga0310686_1134476427	3300031708	Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPAPRWAPGAESAPIAVRTPSPPGRPASVAEQMQDIFHELHADGRNAACTVCDRQYWPS
Ga0307476_112817561	3300031715	Hardwood Forest Soil	MKNLVTPNVTLAIVLLAAMAAVALRAAVRRPAPRWAPGAESAPIAVRTPSPPGRPARVAEQMQDIFHELHADGRNAA
Ga0318497_107904012	3300031805	Soil	MKNVMTPNITLAIVLLAAMAAVVLRAAARRPEPRWASGTASAPIAGRTPGSPGRPASAVEQMQDIFHELHAEGRHAACTVCDSQY
Ga0311301_1007439810	3300032160	Peatlands Soil	TPNFTLVIVLLAAMAAVALRAAARRPETRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSKYWPA
Ga0311301_109572622	3300032160	Peatlands Soil	MKNLMTRNITPALVLLGAMAAVALRAAARRPEPRWASGAESATITVRTPGHPGRPASAVKQMQDIFHELHADGRNAACTVCDGLYWSVEGQ
Ga0311301_111464513	3300032160	Peatlands Soil	MKNLMTPNITLVIVLLAAMAAVALRAAARRPEPRWAPGAESAPITVRTPGPPGRPASAVEQMQDIFHELHADGRNAACTVCDSQYWPA
Ga0335079_109166742	3300032783	Soil	MKNLMTPNITLAIVLLAAMAAVGLRAVAGRPEPRWAPGAESAPIAVRTPSSPGRPASAVEQMQDIFHELHGDGRNAACTVCDSQYWSA
Ga0335076_108092811	3300032955	Soil	MKNVITPNITLAIVLVAAMAAVALRATARRPEPRWASGAESAPIALKTSSFPGRPGSAAEQMQDIFHELHADGRNAVCTV
Ga0335073_102647113	3300033134	Soil	MMKNVMTPNITLTIVLLAAMAAIALRAAARRPEPRWAPATESAPIAVGISGSPGRSAHAVEQMQDIFHELHADGRNAACGVCDSQYWLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094197

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences