Metagenome Family F094217

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094217
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	102 residues
Representative Sequence	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Number of Associated Samples	98
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	50.00 %
% of genes near scaffold ends (potentially truncated)	47.17 %
% of genes from short scaffolds (< 2000 bps)	93.40 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (27.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.170 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.29% β-sheet: 26.67% Coil/Unstructured: 39.05%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF04191	PEMT	2.83
PF01988	VIT1	1.89
PF09361	Phasin_2	1.89
PF00989	PAS	0.94
PF05532	CsbD	0.94
PF01384	PHO4	0.94
PF08239	SH3_3	0.94
PF04545	Sigma70_r4	0.94
PF03176	MMPL	0.94
PF12244	DUF3606	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.89
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.89
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.94
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.94
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.94
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.23 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	90.57 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	79.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.60 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	79.25 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.66 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	79.25 %
Bradyrhizobium ottawaense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	5.66 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.89 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9011176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4804	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1069963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	519	Open in IMG/M
3300000880\|AL20A1W_1387782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1065	Open in IMG/M
3300000887\|AL16A1W_10189296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	781	Open in IMG/M
3300001538\|A10PFW1_10442845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	665	Open in IMG/M
3300004058\|Ga0055498_10097764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	590	Open in IMG/M
3300004114\|Ga0062593_102940925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	545	Open in IMG/M
3300004156\|Ga0062589_102773924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	511	Open in IMG/M
3300004463\|Ga0063356_105316978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	553	Open in IMG/M
3300004643\|Ga0062591_102131622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	581	Open in IMG/M
3300004643\|Ga0062591_102336135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	559	Open in IMG/M
3300005093\|Ga0062594_100158891	All Organisms → cellular organisms → Bacteria → Proteobacteria	1498	Open in IMG/M
3300005331\|Ga0070670_101574487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	604	Open in IMG/M
3300005332\|Ga0066388_102883442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	879	Open in IMG/M
3300005339\|Ga0070660_100816655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	785	Open in IMG/M
3300005356\|Ga0070674_102140678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	510	Open in IMG/M
3300005440\|Ga0070705_100262941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1218	Open in IMG/M
3300005468\|Ga0070707_100885423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	857	Open in IMG/M
3300005529\|Ga0070741_10825407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	808	Open in IMG/M
3300005547\|Ga0070693_100410383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	941	Open in IMG/M
3300005549\|Ga0070704_101279797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	670	Open in IMG/M
3300005549\|Ga0070704_101313620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	662	Open in IMG/M
3300005616\|Ga0068852_102260972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	565	Open in IMG/M
3300005719\|Ga0068861_102558459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	514	Open in IMG/M
3300005764\|Ga0066903_105943940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	640	Open in IMG/M
3300006175\|Ga0070712_100267664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1371	Open in IMG/M
3300006175\|Ga0070712_101831308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	531	Open in IMG/M
3300006196\|Ga0075422_10039985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1665	Open in IMG/M
3300006845\|Ga0075421_101720355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	678	Open in IMG/M
3300006854\|Ga0075425_100087078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3539	Open in IMG/M
3300006903\|Ga0075426_11505615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	512	Open in IMG/M
3300006914\|Ga0075436_100590089	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300006954\|Ga0079219_10074224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1570	Open in IMG/M
3300006954\|Ga0079219_12045336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	546	Open in IMG/M
3300006969\|Ga0075419_10455134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	884	Open in IMG/M
3300007076\|Ga0075435_101285541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	641	Open in IMG/M
3300009094\|Ga0111539_11394119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	813	Open in IMG/M
3300009098\|Ga0105245_12014115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	631	Open in IMG/M
3300009101\|Ga0105247_10033115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3142	Open in IMG/M
3300009174\|Ga0105241_10591412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1001	Open in IMG/M
3300009176\|Ga0105242_11507363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	703	Open in IMG/M
3300009177\|Ga0105248_11078300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	908	Open in IMG/M
3300009545\|Ga0105237_11412269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	702	Open in IMG/M
3300009553\|Ga0105249_12314823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	610	Open in IMG/M
3300010043\|Ga0126380_11420177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	611	Open in IMG/M
3300010376\|Ga0126381_100676699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1474	Open in IMG/M
3300010400\|Ga0134122_10554434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1052	Open in IMG/M
3300010403\|Ga0134123_10447063	All Organisms → cellular organisms → Bacteria → Proteobacteria	1200	Open in IMG/M
3300011992\|Ga0120146_1016873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1418	Open in IMG/M
3300011996\|Ga0120156_1015374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1510	Open in IMG/M
3300011998\|Ga0120114_1018198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1493	Open in IMG/M
3300011998\|Ga0120114_1031580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1071	Open in IMG/M
3300012003\|Ga0120163_1059328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	903	Open in IMG/M
3300012004\|Ga0120134_1015122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1204	Open in IMG/M
3300012004\|Ga0120134_1049654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	726	Open in IMG/M
3300012212\|Ga0150985_106984465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	616	Open in IMG/M
3300012897\|Ga0157285_10185736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	643	Open in IMG/M
3300012931\|Ga0153915_11242268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	870	Open in IMG/M
3300012955\|Ga0164298_10299243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	995	Open in IMG/M
3300012957\|Ga0164303_10719356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	676	Open in IMG/M
3300012984\|Ga0164309_11187815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	639	Open in IMG/M
3300012988\|Ga0164306_10510332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	926	Open in IMG/M
3300013294\|Ga0120150_1088557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	587	Open in IMG/M
3300013296\|Ga0157374_11851242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	629	Open in IMG/M
3300013306\|Ga0163162_10655850	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300013308\|Ga0157375_10557168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1307	Open in IMG/M
3300013501\|Ga0120154_1017029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1930	Open in IMG/M
3300013501\|Ga0120154_1149598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	526	Open in IMG/M
3300013758\|Ga0120147_1046193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	770	Open in IMG/M
3300014056\|Ga0120125_1166811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	541	Open in IMG/M
3300014058\|Ga0120149_1059441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	977	Open in IMG/M
3300014308\|Ga0075354_1076816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	662	Open in IMG/M
3300014318\|Ga0075351_1030573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	905	Open in IMG/M
3300014324\|Ga0075352_1023849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1301	Open in IMG/M
3300014827\|Ga0120171_1085615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	828	Open in IMG/M
3300015371\|Ga0132258_10252660	All Organisms → cellular organisms → Bacteria	4311	Open in IMG/M
3300015371\|Ga0132258_10997539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2116	Open in IMG/M
3300015372\|Ga0132256_103742477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	511	Open in IMG/M
3300015373\|Ga0132257_103879146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	544	Open in IMG/M
3300015374\|Ga0132255_100866244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1349	Open in IMG/M
3300016357\|Ga0182032_12044711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	503	Open in IMG/M
3300016404\|Ga0182037_10283154	All Organisms → cellular organisms → Bacteria → Proteobacteria	1325	Open in IMG/M
3300019356\|Ga0173481_10011814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2487	Open in IMG/M
3300019361\|Ga0173482_10321489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	689	Open in IMG/M
3300023077\|Ga0247802_1088024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	531	Open in IMG/M
3300025916\|Ga0207663_10019838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3796	Open in IMG/M
3300025926\|Ga0207659_11740465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	530	Open in IMG/M
3300025933\|Ga0207706_10190674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1799	Open in IMG/M
3300025936\|Ga0207670_11283487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	621	Open in IMG/M
3300025937\|Ga0207669_11315713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	614	Open in IMG/M
3300025939\|Ga0207665_10996625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	666	Open in IMG/M
3300025945\|Ga0207679_10271660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1450	Open in IMG/M
3300025957\|Ga0210089_1008957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1056	Open in IMG/M
3300026023\|Ga0207677_11179968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	700	Open in IMG/M
3300026067\|Ga0207678_10577855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	984	Open in IMG/M
3300026078\|Ga0207702_12524733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	500	Open in IMG/M
3300026095\|Ga0207676_12029094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	574	Open in IMG/M
3300026121\|Ga0207683_11372950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	653	Open in IMG/M
3300027907\|Ga0207428_10202341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1494	Open in IMG/M
3300029987\|Ga0311334_10517791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	961	Open in IMG/M
3300031170\|Ga0307498_10025623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1399	Open in IMG/M
3300031573\|Ga0310915_10992814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	586	Open in IMG/M
3300031744\|Ga0306918_10906106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	687	Open in IMG/M
3300031890\|Ga0306925_10974340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	867	Open in IMG/M
3300031947\|Ga0310909_10340924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1258	Open in IMG/M
3300031954\|Ga0306926_10302858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1978	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.26%
Host-Associated	Host-Associated	37.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.43%
Plants	Host-Associated → Plants	37.74%
Aquatic	Environmental → Aquatic	2.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.26%
Marine	Environmental → Aquatic → Marine	1.89%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Peat	Environmental → Terrestrial → Peat	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.98%
Loam	Environmental → Terrestrial → Soil → Loam	11.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	16.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.49%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	16.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.49%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000880	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-65cm-20A)- 1 week illumina	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014827	Permafrost microbial communities from Nunavut, Canada - A3_80cm_18M	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00959840	2088090015	Soil	MRAFFVALIGCLSMAACSLQSPTSEAQSNLLGMTQKQISSCLGPPTQKTEEGVADIWSYPAGQSCLVKIYFTYGRASHVNYVGANGKPVSPGDECPVVGEKCA
AP72_2010_repI_A01DRAFT_10699632	3300000579	Forest Soil	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDE
AL20A1W_13877822	3300000880	Permafrost	MXXXXXXXACSLQSPTSEAQSNLLGMTQKQILSCLGVPTQKTTEGVAEVWSFAAGQSCFVKIYFAYGRASHVTYVGSNGEPLSPGEECPFVGQKCVMH*
AL16A1W_101892962	3300000887	Permafrost	MRILLGVLISCSLMEACSLQSPTSEAPPNLLGMTQKQISSCLGAPTQKTAEGVAEVWSYPGGQSCFVKIYFAYGRASRVKYVGPNDEPLSPGEECPLVGEKCVMR*
A10PFW1_104428451	3300001538	Permafrost	MRVLLVALISCLSMAACSLQSPTSEAQSNLLGMTQKQISSCLGPPTQKTTEGVAEAWSYAAGRSCLIKIYFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0055498_100977641	3300004058	Natural And Restored Wetlands	MRVLFVALIGSLSMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYVGANGQPLSPGEECPVVGEQCAMR*
Ga0062593_1029409251	3300004114	Soil	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGTPLSPGDECPFVGEKCAMR
Ga0062589_1027739241	3300004156	Soil	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQIFLLGTSSSEDHRGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEK
Ga0063356_1053169781	3300004463	Arabidopsis Thaliana Rhizosphere	LGLRGFRLAFIAPWHAIPCNNESLRRDGVPGRTPAKICSETLRRLQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPLVGEKCAMR*
Ga0062591_1021316222	3300004643	Soil	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKP
Ga0062591_1023361351	3300004643	Soil	LSMAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSEVWSYAAGQSCLVKIYFAYGRASHVNYVGLNGKPLSPGDECPVVGEKCAMR*
Ga0062594_1001588912	3300005093	Soil	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0070670_1015744871	3300005331	Switchgrass Rhizosphere	RRDGVPGLTPAKICSETLRRLQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0066388_1028834421	3300005332	Tropical Forest Soil	MTKDPYSRPKISRPMTRVLLCALLSTLAMAACSLQGPEPEAHSNMLGLTEKRISSCLGAPTQKSTEGATEIWSYPDGQSCSVRISFLYGRASQVGYVGANGQPLTPG
Ga0070660_1008166552	3300005339	Corn Rhizosphere	CSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGASEVWSYAAGQSCLVKIYFAYGRASHVNYVGLDGKPLSPGDECPVVGEKCAMR*
Ga0070674_1021406781	3300005356	Miscanthus Rhizosphere	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPLVGEKCAMR*
Ga0070705_1002629412	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0070707_1008854232	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTHKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0070741_108254071	3300005529	Surface Soil	MRTTRDCGMRPIAKVYFAALIGALATACSLQAPEPEMHSNMLGLTEKQIASCLGAPAQKSTVGGAEVWSYPDGPSCSVRISFLYGRASHVGYAGPIGQELAPGACPVVGEHCALR*
Ga0070693_1004103833	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQIASCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPLVGEKCAM
Ga0070704_1012797972	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEK
Ga0070704_1013136202	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	FIAPWHAIPCNNESLRRDGVPGRTPAKICSETLRRLQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0068852_1022609722	3300005616	Corn Rhizosphere	MRALFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLS
Ga0068861_1025584591	3300005719	Switchgrass Rhizosphere	CEANRYAISERPRRLQMRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0066903_1059439401	3300005764	Tropical Forest Soil	MEACSLQSPPTSEAQSNLLGMTKKQISSCLGDPAQKTDEVWSYPGGQSCFVKIYFTYGRASRVQYVGPNGEPLSPGEACPFMGEKCAMR*
Ga0070712_1002676643	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPLVGEKCAMR*
Ga0070712_1018313081	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPTQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECP
Ga0075422_100399851	3300006196	Populus Rhizosphere	MRPLFVALIGCLSMAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSDVWSYGAGQSCLVKIYFAYGRASHVNYVGLNGKPLSPGDECPVVGEKCAMR*
Ga0075421_1017203553	3300006845	Populus Rhizosphere	MAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSEVWSYATGQSCLVKIYFAYGRASQVNYVGLNGKPLPPGDECPVVGEKCAMR*
Ga0075425_1000870781	3300006854	Populus Rhizosphere	EAHSNLLGMTQKQISSCLGAPTQKTTEGVSDVWSYGAGQSCLVKIYFAYGRASHVNYVGLNGKPLSPGDECPVVGEKCAMR*
Ga0075426_115056151	3300006903	Populus Rhizosphere	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAM
Ga0075436_1005900892	3300006914	Populus Rhizosphere	MAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSDVWSYGAGQSCLVKIYFAYGRASHVNYVGLNGKPLSPGDECPVVGEKCAMR*
Ga0079219_100742241	3300006954	Agricultural Soil	MAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKATEGVSEVWSYAAGQSCLVKIYFAYGRASQVNYVGLNGKPLSPGDECPVVGEKCAMR*
Ga0079219_120453361	3300006954	Agricultural Soil	SRLQTQLNRCLKMRVFYVGLISCLSMTACSLQSPTSEAQSNLLGMTQKQISSCLGLPTQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0075419_104551342	3300006969	Populus Rhizosphere	MRVSYVALISCLSMAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSDVWSYGAGQSCLVKIYFAYGRASHVNYVGANGNPMSPGDECPVVGEKCAMR*
Ga0075435_1012855411	3300007076	Populus Rhizosphere	SMAACSLQSPTSEAQSNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYAAGQSCVVKIYFAYGRASRVNYVGANGKPLSAGDECPVVGEKCAMR*
Ga0111539_113941191	3300009094	Populus Rhizosphere	LQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGASEVWSYAAGQSCLVKIYFAYGRASQVNYVGLNGKPLPPGDECPVVGEKCAMR*
Ga0105245_120141151	3300009098	Miscanthus Rhizosphere	MAACSLQNPTSETQSNLPGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0105247_100331153	3300009101	Switchgrass Rhizosphere	MAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0105241_105914122	3300009174	Corn Rhizosphere	MAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAKVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0105242_115073631	3300009176	Miscanthus Rhizosphere	MAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGENCAMR*
Ga0105248_110783001	3300009177	Switchgrass Rhizosphere	MRVSYVTLISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0105237_114122691	3300009545	Corn Rhizosphere	LRRLQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0105249_123148232	3300009553	Switchgrass Rhizosphere	MRILFVALIGCLSVAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0126380_114201771	3300010043	Tropical Forest Soil	MAACSLQNPTSETPSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0126381_1006766992	3300010376	Tropical Forest Soil	MAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGADGKPLSPGDECPFVGEKCAMR*
Ga0134122_105544342	3300010400	Terrestrial Soil	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTPTQISSCLGPPTQKTTEGAAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0134123_104470631	3300010403	Terrestrial Soil	RLVLSSNTPNSVPLSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPTQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0120146_10168733	3300011992	Permafrost	MRIVFVALISCLSMAACSLQSPTSEAQSNLLGMTQKQISSCLGPPTQKTTEGVAEVWSFAAGQSCFVKIYFAYGRASHVTYVGSNGEPLSPGEECPFVGQKCVMH*
Ga0120156_10153743	3300011996	Permafrost	MRIVFVALISCLSMAACTLQSPTSEAQSNLLGMTQKQILSCLGVPTQKTTEGVAEVWSFAAGQSCFVKIYFAYGRASHVTYVGSNGEPLSPGEECPFVGQKCVMH*
Ga0120114_10181982	3300011998	Permafrost	MRIVFVALISCLSMAACSLQSPTSEAQSNLLGLTQKQILSCLGAPTQKTTEGVAEAWSYAAGRSCLIKIYFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0120114_10315803	3300011998	Permafrost	MEACSLQSPTSEAPPNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYPGGQSCFVKIYFAYGRASRVKYVGPNDEPLSPGEECPLVGEKCVMR*
Ga0120163_10593281	3300012003	Permafrost	MRIVFVALISCLSMAACSLQSPTSEAQSNLLGMTQKQILSCLGVPTQKTTEGVAEVWSFAAGQSCFVKIYFAYGRASHVTYVGSNGEPLSPGEECPFVGQKCVMH*
Ga0120134_10151222	3300012004	Permafrost	MRILLGVLISCSLMEACSAQSPTSEAPPNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYPGGQSCFVKIYFAYGRASRVKYVGPNDEPLSPGEECPLVGEKCVMR*
Ga0120134_10496541	3300012004	Permafrost	AQSNLLGLTQKQILSCLGAPTQKTTEGVAEVWSYAAGQSCLVKIYFAYGRASHMNYVGSNGEPLSPGDECPFVGEKCVMH*
Ga0150985_1069844651	3300012212	Avena Fatua Rhizosphere	MLGMKVAHVPFSRLCPMGISGRRNTQRALFVTLINCLAACSLQSSTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVAEAWSYAAGQSCLVKIEFAYGRASRVNYVGLNGKPLSPGDECQVVGEKCAMR*
Ga0157285_101857361	3300012897	Soil	QNPTSETQSNLLGMTQKQISSCLGAPTQTTTEVVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGADDKPLSPGDECPFVGEKCAMR*
Ga0153915_112422682	3300012931	Freshwater Wetlands	MRVLFVALIGSLPMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYVGANGQKLSPGEECPVVGEQCAMR*
Ga0164298_102992432	3300012955	Soil	MAACSLQNPTSEVQSNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYAAGQSCFIKIYFAYGRASRVSYVGANGKPLSPGDECPFVGEKCVMR*
Ga0164303_107193561	3300012957	Soil	QGGTQFCAGRDNPHLPACEANRYAITSSCETETLRRLEMRVLFVALISCLSMGACSLQNPTSEVQSNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYAAGQSCFIKIYFAYGRASRVSYIGAQAAVARR*
Ga0164309_111878152	3300012984	Soil	MAACSLQNPTPEVQSNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYAAGQSCFIKIYFAYGRASRVSYVGANGKPLSPGDECPFVGEKCVMR*
Ga0164306_105103321	3300012988	Soil	MAACSLQNPTSEVQSNLLGMTQKQISSCLGAPTQKTTEGVAEVWSYAAGQSCFIKIYFAYGRASRVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0120150_10885572	3300013294	Permafrost	SEAPPNLLGMTQKQISSCLGAPTQKTAEGVAEVWSYPGGQSCFVKIYFAYGRASRVKYVGQNDEPLSPGEECPLVGEKCVMR*
Ga0157374_118512421	3300013296	Miscanthus Rhizosphere	MAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSP
Ga0163162_106558501	3300013306	Switchgrass Rhizosphere	MAACSLQSPTSEAQSNLLGMTQKQISSCLGAATQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0157375_105571681	3300013308	Miscanthus Rhizosphere	SPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSEVWSYATGQSCLVKIYFAYGRASQVNYVGLNGKPLPPGDECPVVGEKCAMR*
Ga0120154_10170291	3300013501	Permafrost	SMAACSLQSPTSEAQSNLLGMTQKQILSCLGVPTQKTTEGVAEVWSFAAGQSCFVKIYFAYGRASHVTYVGSNGEPLSPGEECPFVGQKCVMH*
Ga0120154_11495982	3300013501	Permafrost	LQMRILLGVLISCSLMEACSLQSPTSEAPPNLLGMTQKQISSCLGAPTQKTAEGVAEVWSYPGGQSCFVKIYFAYGRASRVKYVGPNDEPLSPGEECPLVGEKCVMR*
Ga0120147_10461931	3300013758	Permafrost	MRVLFVALISCLSMAACSLQSPTSEAQSNLLGMTQKQILSCLGAPTQKTTEGVAEVWSFAAGQSCFVKIYFAYGRASHVTYVGSNGEPLSPGEECPFVGQKCVMH*
Ga0120125_11668111	3300014056	Permafrost	QSFSYNELLRTETVRRLQMRVLLVALISCLSMAACSLQSPTSEAQSNLLGMTQKQISSCLGPPTQKTTEGVAEAWSYAAGRSCLIKIYFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR*
Ga0120149_10594412	3300014058	Permafrost	MRVLFVALISCLSMAACSLQSPTSEAQSNLLGMTQKQILSCLGVPTQKTTEGVAEVWSFAAGQSCFVKIYFAYGRASHVTYVGSNGEPLSPGEECPFVGQKCVMH*
Ga0075354_10768161	3300014308	Natural And Restored Wetlands	MTSRSELKEDAGGAFKMRVLFVALIGSLSMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYVGANGQPLSPGEECPVVGEQCAMR*
Ga0075351_10305731	3300014318	Natural And Restored Wetlands	MTKDFGSRLKIRVRFAALIGALSMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYVGANGQPLSPGEECPVVGEQCEMR*
Ga0075352_10238492	3300014324	Natural And Restored Wetlands	MTSRSELKEDAGGAFKMRVLFVALIGSLSMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYVGANGQPLSPGEECPVVGEQCALR*
Ga0120171_10856151	3300014827	Permafrost	MRILLGVLISCSLMEACSLQSPTSEAPPNLLGMTQKQISSCLGAPTQKSTEGGADIWSYPGGQSCFVKIYFAYGRASRVKYVGPNDEPLSPGEECPLVGEKCVMR*
Ga0132258_102526605	3300015371	Arabidopsis Rhizosphere	MRVLFIALICSLWMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYAGANGQPLSPGEECPVVGEQCAMR*
Ga0132258_109975392	3300015371	Arabidopsis Rhizosphere	MAACSLQNPTSETQSNLLGMTQKQIASCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGHASHVSYVGANGKPLSAGDECPFVGEKCAMR*
Ga0132256_1037424772	3300015372	Arabidopsis Rhizosphere	MAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGHASHVSYVGANGKPLSPGDECPFVGEKCAMR*
Ga0132257_1038791462	3300015373	Arabidopsis Rhizosphere	MRVLFIALICSLWMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYAGANGQPLSPGEECPVVGEQCAM
Ga0132255_1008662443	3300015374	Arabidopsis Rhizosphere	MRVLFIALICSLWMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYAGANGQPLSPGEECP
Ga0182032_120447111	3300016357	Soil	PSFPPGLRGFRLAFIAPWHAIPCNDESLRRDGVPGLTPAKICSETLRRQQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGIAEVWSYPAGQSCLIKISFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Ga0182037_102831543	3300016404	Soil	MRILFVALIGCLSMAACSLQNPTSETQLNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Ga0173481_100118145	3300019356	Soil	MAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSEVWSYAAGQSCLVKIYFAYGRASHVNYVGLNGKPLSPGDECPVVGEKCAMR
Ga0173482_103214891	3300019361	Soil	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR
Ga0247802_10880241	3300023077	Soil	LSMAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSEVWSYAAGQSCLVKIYFAYGRASHVNYVGLNGKPLSPGDECPVVGEKCAMR
Ga0207663_100198381	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSQGD
Ga0207659_117404651	3300025926	Miscanthus Rhizosphere	VSYVALISCLSIAACSVQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR
Ga0207706_101906741	3300025933	Corn Rhizosphere	SPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGASEVWSYAAGQSCLVKIYFAYGRASHVNYVGLDGKPLSPGDECPVVGEKCAMR
Ga0207670_112834871	3300025936	Switchgrass Rhizosphere	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPTQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDECPVVGEKCAMR
Ga0207669_113157132	3300025937	Miscanthus Rhizosphere	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSA
Ga0207665_109966251	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AFIAPWHAIPCNNESLRRDGVPGLTPAKICSKTLRRLQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Ga0207679_102716601	3300025945	Corn Rhizosphere	LQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSEVWSYAAGQSCLVKIYFAYGRASHVNYVGLDGKPLSPGDECPVVGEKCAMR
Ga0210089_10089572	3300025957	Natural And Restored Wetlands	MRVLFVALIGSLSMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYVGANGQPLSPGEECPVVGEQCAMR
Ga0207677_111799681	3300026023	Miscanthus Rhizosphere	MRALFVALIGCLSMAACSLQSPTSEAHSNLLGMTQKQISSCLEAPTQKTTEGVSEVWSYTTGQSCLVKIYFAYGRASQVNYVGLNGKPLSPGDECPVVGEKCAMR
Ga0207678_105778551	3300026067	Corn Rhizosphere	MAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPLVGEKCAMR
Ga0207702_125247331	3300026078	Corn Rhizosphere	CSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSEVWSYATGQSCLVKIYFTYGRASQVNYVGLNGKPLPPGDECPVVGEKCAMR
Ga0207676_120290941	3300026095	Switchgrass Rhizosphere	MRVSYVALISCLSMAACSLQSPTSEPQSNLLGMTQKQISSCLGPPPQKTTEGVAEVWSYPAGQSCLIKIDFAYGRASHVNYVGANGQPLSAGDE
Ga0207683_113729501	3300026121	Miscanthus Rhizosphere	RLQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Ga0207428_102023411	3300027907	Populus Rhizosphere	MRPLFVALIGCLSMAACSLQSPTSEAHSNLLGMTQKQISSCLGAPTQKTTEGVSDVWSYGTGQSCLVKIYFAYGRASHVNYVGLNGKPLSPGDECPVVGEKCAMR
Ga0311334_105177912	3300029987	Fen	MRILFAALLSCSAIAACSLQSPTSEFHSNMLGLTQKQISSCLGAPAQKSTGGGAEVWSYADGQSCSVKISFVYGRASHVDYFGHDGGPRSPGAECPIVGEKCMLN
Ga0307498_100256233	3300031170	Soil	MRVLFIALICSLWMAACSLQSPEPEMHSNMLGLTEKQISSCLGAPAQKTTEGGAEIWSYPDGQSCSVRISFLYGRASHVGYAGANGQPLSPGEECPVVGEQCAMR
Ga0310915_109928141	3300031573	Soil	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGGPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Ga0306918_109061062	3300031744	Soil	DGVPGLTPAKICSETLRRQQMRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Ga0306925_109743402	3300031890	Soil	MRILFVALIGCLSMAASLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCFIKIYFAYGRASHVSYVGANGKPLSPGDECPFVGEKCAMR
Ga0310909_103409242	3300031947	Soil	MRILFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGGPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPLVGEKCAMR
Ga0306926_103028585	3300031954	Soil	LFVALIGCLSMAACSLQNPTSETQSNLLGMTQKQISSCLGAPTQTTTEGVAEVWSYPAGQSCLIKIYFAYGRASHVSYVGANGKPLSPGDECPLVGEKCAMR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences