Metagenome / Metatranscriptome Family F094236

Basic Information
Family ID	F094236
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	84 residues
Representative Sequence	DLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR
Number of Associated Samples	86
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.77 %
% of genes near scaffold ends (potentially truncated)	94.34 %
% of genes from short scaffolds (< 2000 bps)	91.51 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Unclassified (71.698 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (16.038 % of family members)
Environment Ontology (ENVO)	Unclassified (28.302 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.396 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.77% β-sheet: 21.78% Coil/Unstructured: 55.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02954	HTH_8	4.72
PF13492	GAF_3	1.89
PF09411	PagL	1.89
PF03544	TonB_C	0.94
PF00158	Sigma54_activat	0.94
PF02517	Rce1-like	0.94
PF05598	DUF772	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
All Organisms	root	All Organisms	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
cellular organisms	root	All Organisms → cellular organisms	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.75 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Candidatus Kinetoplastibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Kinetoplastibacterium	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.75 %
Candidatus Kinetoplastibacterium crithidii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Kinetoplastibacterium → Candidatus Kinetoplastibacterium crithidii	1.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10231473	Not Available	607	Open in IMG/M
3300003218\|JGI26339J46600_10135373	Not Available	581	Open in IMG/M
3300004080\|Ga0062385_11210144	Not Available	517	Open in IMG/M
3300004092\|Ga0062389_102851440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Kinetoplastibacterium → Candidatus Kinetoplastibacterium crithidii	646	Open in IMG/M
3300004152\|Ga0062386_100567350	Not Available	926	Open in IMG/M
3300004152\|Ga0062386_100996525	Not Available	694	Open in IMG/M
3300004152\|Ga0062386_101662592	Not Available	533	Open in IMG/M
3300005293\|Ga0065715_10237043	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300005332\|Ga0066388_105188144	Not Available	661	Open in IMG/M
3300005338\|Ga0068868_100845168	Not Available	829	Open in IMG/M
3300005344\|Ga0070661_100743795	Not Available	801	Open in IMG/M
3300005347\|Ga0070668_101550006	Not Available	606	Open in IMG/M
3300005439\|Ga0070711_101763705	Not Available	543	Open in IMG/M
3300005445\|Ga0070708_100536259	Not Available	1104	Open in IMG/M
3300005543\|Ga0070672_100867410	Not Available	796	Open in IMG/M
3300005548\|Ga0070665_101564932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Kinetoplastibacterium → Candidatus Kinetoplastibacterium crithidii	667	Open in IMG/M
3300006052\|Ga0075029_100100630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1734	Open in IMG/M
3300006052\|Ga0075029_101259734	Not Available	518	Open in IMG/M
3300006059\|Ga0075017_100014731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5011	Open in IMG/M
3300006102\|Ga0075015_100042513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2119	Open in IMG/M
3300006174\|Ga0075014_100558916	Not Available	649	Open in IMG/M
3300006174\|Ga0075014_100663942	Not Available	603	Open in IMG/M
3300006954\|Ga0079219_10510550	Not Available	845	Open in IMG/M
3300009156\|Ga0111538_13595441	Not Available	537	Open in IMG/M
3300009520\|Ga0116214_1068063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300009520\|Ga0116214_1068636	Not Available	1291	Open in IMG/M
3300009525\|Ga0116220_10458347	Not Available	575	Open in IMG/M
3300009525\|Ga0116220_10532400	Not Available	535	Open in IMG/M
3300009643\|Ga0116110_1130512	Not Available	838	Open in IMG/M
3300009644\|Ga0116121_1086935	Not Available	978	Open in IMG/M
3300009700\|Ga0116217_10671721	Not Available	642	Open in IMG/M
3300009762\|Ga0116130_1138773	Not Available	766	Open in IMG/M
3300009764\|Ga0116134_1173098	Not Available	757	Open in IMG/M
3300009839\|Ga0116223_10258738	Not Available	1048	Open in IMG/M
3300010047\|Ga0126382_10821131	Not Available	795	Open in IMG/M
3300010048\|Ga0126373_11009029	Not Available	898	Open in IMG/M
3300010341\|Ga0074045_10301131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300010343\|Ga0074044_10734630	Not Available	645	Open in IMG/M
3300010359\|Ga0126376_12303830	Not Available	584	Open in IMG/M
3300010362\|Ga0126377_10786951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300010373\|Ga0134128_13128384	Not Available	508	Open in IMG/M
3300010376\|Ga0126381_104402827	Not Available	545	Open in IMG/M
3300010379\|Ga0136449_100275400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3097	Open in IMG/M
3300010379\|Ga0136449_101432612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300010396\|Ga0134126_12183440	Not Available	604	Open in IMG/M
3300012984\|Ga0164309_11208876	Not Available	634	Open in IMG/M
3300013297\|Ga0157378_11776014	Not Available	665	Open in IMG/M
3300014155\|Ga0181524_10289644	Not Available	751	Open in IMG/M
3300014158\|Ga0181521_10299646	Not Available	825	Open in IMG/M
3300014162\|Ga0181538_10417492	Not Available	714	Open in IMG/M
3300015371\|Ga0132258_10560298	All Organisms → cellular organisms → Bacteria → Acidobacteria	2865	Open in IMG/M
3300015371\|Ga0132258_11996508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1459	Open in IMG/M
3300016730\|Ga0181515_1126975	Not Available	517	Open in IMG/M
3300017822\|Ga0187802_10071739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300017822\|Ga0187802_10183762	Not Available	802	Open in IMG/M
3300017823\|Ga0187818_10158087	Not Available	987	Open in IMG/M
3300017823\|Ga0187818_10293820	Not Available	713	Open in IMG/M
3300017925\|Ga0187856_1267826	Not Available	597	Open in IMG/M
3300017928\|Ga0187806_1391274	Not Available	500	Open in IMG/M
3300017929\|Ga0187849_1232450	Not Available	708	Open in IMG/M
3300017934\|Ga0187803_10106758	Not Available	1099	Open in IMG/M
3300017942\|Ga0187808_10432909	Not Available	604	Open in IMG/M
3300017955\|Ga0187817_10388518	Not Available	890	Open in IMG/M
3300017955\|Ga0187817_10484008	Not Available	790	Open in IMG/M
3300017994\|Ga0187822_10205491	Not Available	658	Open in IMG/M
3300017995\|Ga0187816_10409319	Not Available	604	Open in IMG/M
3300017995\|Ga0187816_10458327	Not Available	571	Open in IMG/M
3300018003\|Ga0187876_1007094	All Organisms → cellular organisms → Bacteria	6440	Open in IMG/M
3300018006\|Ga0187804_10397187	Not Available	610	Open in IMG/M
3300018007\|Ga0187805_10088351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1399	Open in IMG/M
3300018012\|Ga0187810_10319369	Not Available	644	Open in IMG/M
3300018012\|Ga0187810_10461556	Not Available	539	Open in IMG/M
3300018022\|Ga0187864_10004193	All Organisms → cellular organisms → Bacteria	11399	Open in IMG/M
3300018046\|Ga0187851_10518913	Not Available	676	Open in IMG/M
3300018062\|Ga0187784_11307618	Not Available	575	Open in IMG/M
3300018085\|Ga0187772_11023290	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300018086\|Ga0187769_10127671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300018088\|Ga0187771_10999441	Not Available	710	Open in IMG/M
3300018090\|Ga0187770_11630055	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300021168\|Ga0210406_11009638	Not Available	618	Open in IMG/M
3300021478\|Ga0210402_11345770	Not Available	641	Open in IMG/M
3300021478\|Ga0210402_11612991	Not Available	576	Open in IMG/M
3300025507\|Ga0208188_1051518	Not Available	1033	Open in IMG/M
3300025922\|Ga0207646_11502060	Not Available	583	Open in IMG/M
3300025929\|Ga0207664_10951495	Not Available	770	Open in IMG/M
3300025940\|Ga0207691_11172103	Not Available	638	Open in IMG/M
3300025961\|Ga0207712_10335222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300026089\|Ga0207648_10248313	Not Available	1586	Open in IMG/M
3300027497\|Ga0208199_1018615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1561	Open in IMG/M
3300027497\|Ga0208199_1112576	Not Available	558	Open in IMG/M
3300027696\|Ga0208696_1138883	Not Available	791	Open in IMG/M
3300027698\|Ga0209446_1105529	Not Available	724	Open in IMG/M
3300027825\|Ga0209039_10038397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2247	Open in IMG/M
3300027825\|Ga0209039_10179985	Not Available	868	Open in IMG/M
3300027898\|Ga0209067_10444645	Not Available	730	Open in IMG/M
3300027911\|Ga0209698_10080205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2769	Open in IMG/M
3300027911\|Ga0209698_10223758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1512	Open in IMG/M
3300030706\|Ga0310039_10055474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1744	Open in IMG/M
3300031128\|Ga0170823_14574538	Not Available	551	Open in IMG/M
3300032160\|Ga0311301_10233966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3066	Open in IMG/M
3300032160\|Ga0311301_10536593	Not Available	1717	Open in IMG/M
3300032160\|Ga0311301_10854526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300032160\|Ga0311301_12221652	Not Available	629	Open in IMG/M
3300032828\|Ga0335080_12351863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300032829\|Ga0335070_11125194	Not Available	722	Open in IMG/M
3300033412\|Ga0310810_10740324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.74%
Host-Associated	Host-Associated	12.26%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	45.28%
Terrestrial	Environmental → Terrestrial	42.45%
Plants	Host-Associated → Plants	12.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.45%
Freshwater	Environmental → Aquatic → Freshwater	36.79%
Sediment	Environmental → Aquatic → Sediment	8.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	36.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.49%
Loam	Environmental → Terrestrial → Soil → Loam	4.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	15.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.49%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.49%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	16.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	15.09%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.49%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.49%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.66%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102314732	3300000567	Peatlands Soil	DLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR*
JGI26339J46600_101353731	3300003218	Bog Forest Soil	RLAGFEVELIGSHTSDLNHVDPACPTCRHVRSVLLAIADLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVLLNRANGQSFETDLLNEVKTFLNRWGIHQH*
Ga0062385_112101441	3300004080	Bog Forest Soil	MPGELTLSRNSLTYNIDSHSNSILCLPALGNRSAVSVSIYVFWNQSNGQSFETVLLSDIKAFLNRWGIHQR*
Ga0062389_1028514401	3300004092	Bog Forest Soil	CPRCRNVRAVLLSIANLVPADLAVGVNSFMYNIDSHSGAILCLPALGNRSAVWVSIYLSWSRPNGQSFETDLLTEVRTLLNEWGIHQR*
Ga0062386_1005673502	3300004152	Bog Forest Soil	SVLLAIALAMPRETSFRRNSLTYNIDSHSNSILCLPALGNRAAVSVSIYVSWNRSNGPSFETDLLAEIKTFLNGWGIHQR*
Ga0062386_1009965252	3300004152	Bog Forest Soil	LVGFEVELIGCHTSNLNHIDPRCPACRTVRAALLSIANLVPADLAVGANFLTYNIDSHSGEILCLPALGNRAAVWVSIYLSWNRSNGQSLETDLLTEVRTLLNKWGIHQR*
Ga0062386_1016625921	3300004152	Bog Forest Soil	DPACPTCRHVRSVLLAIADLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVLLNRANGQSFETDLLNEVKTFLNRWGIHQH*
Ga0065715_102370433	3300005293	Miscanthus Rhizosphere	ELTHSGNSLTYNIDSHSNSIICMPALGNRSAVWVSIYVFLNRANGQSIEMDLLNGVKTFLYRWGIHQR*
Ga0066388_1051881441	3300005332	Tropical Forest Soil	LAIADLMPGEFALGRNSLIYDIDSHSNSILCLPALGNRSAVSVSIYVSWSRANGPAFETDLLNGIKTSLHRWGIHQR*
Ga0068868_1008451682	3300005338	Miscanthus Rhizosphere	MPGELTHSGNSLTYNIDSHSNSIICMPALGNRSAVWVSIYVFLNRANGQSFETDLFNGVKTFLYRWGIHQR*
Ga0070661_1007437952	3300005344	Corn Rhizosphere	IGFHTSDLNHLDPGCPACRQVRSVLLAIADAMPRETGSRRNNLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNWSNGRSPETDVVSEIKGFLNGWGIHQR*
Ga0070668_1015500061	3300005347	Switchgrass Rhizosphere	DAMPRETGSRRNNLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNWSNGRSPETDVVSEIKGFLNGWGIHQR*
Ga0070711_1017637051	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DLSIGVNSLTYNIDSHSGAILCLPNLGNRSAVWVSIDVFWNRSNGQSFETDLLSELRTLLNKWEIHQR*
Ga0070708_1005362593	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LTHSGNSLTYNIDSHSNSIICMPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR*
Ga0070672_1008674101	3300005543	Miscanthus Rhizosphere	TSDPNHLDLSCPACRHVRSVLLAIADLMPGELTHSGNSLTYNIDSHSNSIICMPALGNRSAVWVSIYVFLNRANGQSIEMDLLNGVKTFLYRWGIHQR*
Ga0070665_1015649321	3300005548	Switchgrass Rhizosphere	NVRAVLLSIANLVPADLALGVNSLMYNIDSHSGAILCLPALGNRSVVWVSIYLSWGRSNGQSFETDLLTEIRTLLNKWGIHQR*
Ga0075029_1001006305	3300006052	Watersheds	YNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKAFLNRWGIHQR*
Ga0075029_1012597341	3300006052	Watersheds	VLLAIADLMPGELTLSRNSFTYDIDSHSNSIVRLPALGNHSAVWVSVYIFLTRANGQSLETDLLNEVKTFLHRWGIHQR*
Ga0075017_1000147312	3300006059	Watersheds	VLSIFPQPARETSFRRNYLTYNIDSHSNSILCLPALGNRAAVSVSIYIFWNRSNGQSCETDLLSEIKAFLDGWGIHQR*
Ga0075015_1000425135	3300006102	Watersheds	VRSVLLAIADLMPGELTFNRNCLTYNIDSHSNSIVWLPALGNRSAVWVSIYVFLNRANGQSFETDLLKEVKTFLNRWGIHQR*
Ga0075014_1005589162	3300006174	Watersheds	TCRHVRSVLLAIADLMPGELTLSRNSLTYNLDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR*
Ga0075014_1006639422	3300006174	Watersheds	AIALAMPRETSFRRNYLTYNIDSHSNSILCLPALGNRSAVSVSIHVVWNRSNGQSFETDLLSEIKAFLDGWGIHQR*
Ga0079219_105105502	3300006954	Agricultural Soil	LAIADLMPGELTLKRSSLTYDIDSHSNSILCLPALGNRSAVWVSIYVFWNRSNGQRFETDLLSEIKAFLNGWGIHQR*
Ga0111538_135954411	3300009156	Populus Rhizosphere	LLSIANLVPADLALGVNSLMYNIDSHSGAILCLPALGNRSVVWVSIYLSWGRSNGQSFETDLLTEIRTLLNKWGIHQR*
Ga0116214_10680631	3300009520	Peatlands Soil	RTVRAALLSIANLVPADLAVGANFPTYNIDSHSGEILCLPALGNRAAVWVSIYLSWNRSNGQSLETDLLTEVRTLLNKWGIHQR*
Ga0116214_10686361	3300009520	Peatlands Soil	FEVELIGSHTSDLNHVDPSCPTCRHVRSVLLAIVDLMPGELTLSRNSFTYNIDPHSNSIVCLPALGNRSAVSVSIYVVWNRSNGQSFETDLLKEVKTFLNRWSIHQH*
Ga0116220_104583471	3300009525	Peatlands Soil	VLLAIANLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAAWVSIYVFLKRANGQSFETDLLNEVKTFLYKWGIHQR*
Ga0116220_105324001	3300009525	Peatlands Soil	ELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRTNGQSFETDPLNEVKTFLNRWGIHQR*
Ga0116110_11305122	3300009643	Peatland	SFRRNYLTYNIDSHSNSILCLPALGNRSAVSVSIYVVWNRSNGQSFETDLLSEIKAFLNGWGIHQR*
Ga0116121_10869352	3300009644	Peatland	LAIADLMLGEHNFSRNSLTYDIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKAFLNRWGIHQR*
Ga0116217_106717212	3300009700	Peatlands Soil	FEVELIGSHTSDLNHIDPACPTCRHVRSVLLAIAGLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLKRANGQSFETDLLNEVKTFLYKWGIHQR*
Ga0116130_11387731	3300009762	Peatland	ACRHVRSVLLAIALAMPRETSFRRNYLTYNIDSHSNSILCLPALGNRSAVSVSIYVVWNRSDGQSFETDLLSEIKAFLNGWGIHQR*
Ga0116134_11730981	3300009764	Peatland	ERLLVGFEVELIGSHTSDLNHVDPACPTCRHVRSLLLAIAGLMPGELSLSRNSLTYDIDSHSNSIICLPALGNRSAVWVSIYVFLNRTNGQSFETDLLNEVKTFLNKWGIHQR*
Ga0116223_102587381	3300009839	Peatlands Soil	GERRLVGFEVELIGSHTSDLNHVDPSCPTCRHVRSVLLAIVDLMPGELTLSRNSFTYNIDPHSNSIVCLPALGNRSAVSVSIYVVWNRSNGQSFETDLLKEVKTFLNRWSIHQH*
Ga0126382_108211311	3300010047	Tropical Forest Soil	HTSDRKHVDPSCSSCRYVRSVLLALADLMPGELNLSQNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFSNRANGRSFETDLMNGIKALLNGWGIHQH*
Ga0126373_110090291	3300010048	Tropical Forest Soil	ERRLVGFEVELIGSHKSDLSHLDPACPRCRNVRAVLLAIADLLPREASLGVKSLTYNIDSHSNSILRLPALGNRSAVSVSLYVSCSRLNGQSMETEPLIEIKNLLSRWGIHQH*
Ga0074045_103011311	3300010341	Bog Forest Soil	GFEVELIGSHTSDLNHVDPACATCRQVRSVLLAIANLMPGELTLSRNSLTYDIDSHSNAIVCLPALGNRSAVWVSIYVFLNRTNGQSFETDLLNEVRTFLNRWGIHQH*
Ga0074044_107346301	3300010343	Bog Forest Soil	NIDSHSNSIVCLPALGNRSAVWVSIYIFLNRANGQSFETDLLYEVKTFLNRWGIHQR*
Ga0126376_123038302	3300010359	Tropical Forest Soil	ADLMPGELNLSQNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFSNRANGRSFETDLMNGIKALLNGWGIHQR*
Ga0126377_107869513	3300010362	Tropical Forest Soil	LALADLMPGELNLSQNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFSNRANGQSFETDLMNGIKALLNGWGIHQR*
Ga0134128_131283841	3300010373	Terrestrial Soil	TSDLSHLDPGCAACRHVRSVLLAIADAVPRASGPRRNNLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNWSNGRSPETDVVSEIKGFLNGWGIHQR*
Ga0126381_1044028271	3300010376	Tropical Forest Soil	MHREATLSQDSLTCMIDSHSNSILCLPALGNRFAVSVSIYFFWNGTDGQSFEADLLNKIRAFLDKLGIHQR*
Ga0136449_1002754008	3300010379	Peatlands Soil	SLTYNIDSHSNSIVCLPALGNRSAVWVSIYVVLNQANGQSVETDLLNKVKTLLNRWGIHQR*
Ga0136449_1014326121	3300010379	Peatlands Soil	LSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANDQSFETDPLNEVKTFLNRWGIHQR*
Ga0134126_121834402	3300010396	Terrestrial Soil	VGFEVELIGFHTSDLNHLDPGCPACRQVRSVLLAIADAMPRETGSRRNNLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNWSNGRSPETDVVSEIKGFLNGWGIHQR*
Ga0164309_112088761	3300012984	Soil	NNLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNWSNGRSPETDVVSEIKGFLNGWGIHQR*
Ga0157378_117760141	3300013297	Miscanthus Rhizosphere	ELTHSGNSLTYNIDSHSNSIICMPALGNRSAVWVSIYVFLNRANGQSFETDLFNGVKTFLYRWGIHQR*
Ga0181524_102896442	3300014155	Bog	FEVELIGSHASDLNHVDPTCPTCRYVRSVLLAIADVLPGELTLSRKSVTCNIDSHSNSIVCLPALGNRSAVWVSIYVSLNRANGQSFETDLLDEVRAFLNRWGIHQR*
Ga0181521_102996461	3300014158	Bog	ELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNDVKTFLNKWGIHQR*
Ga0181538_104174922	3300014162	Bog	SSCRHVRSVLLAIAGLMPGELTLSRNSLTYNIDSHSNSIACLPALGNRSAVWVSIYVFLNRANGQSFETDLLNDVKTFLNKWGIHQR*
Ga0132258_105602983	3300015371	Arabidopsis Rhizosphere	MSIAHLVPEDLSLGVNSLTYNIDSHSGAILCLPALGNRSAVWVSIYLWSRSNGQSFETDLLTEVRALLNKQGIHQR*
Ga0132258_119965083	3300015371	Arabidopsis Rhizosphere	LTYNIDSHSGAIRCLPALGNRSAAWVSIYFSWSRSNGQSFETDLLAEVRALLNKWGIHQR
Ga0181515_11269751	3300016730	Peatland	IAGLMPGELTLSRNSLTYNIDSHSNSIACLPALGNRSAVWVSIYVFLNRANGQSFETDLLNDVKTFLNKWGIHQR
Ga0187802_100717391	3300017822	Freshwater Sediment	ASDLNHVDPACPMCRHVRSVLLAIADLIPGELTLSRNSLTCNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRTNGQSFETDPLNEVKTFLNRWGIHQR
Ga0187802_101837621	3300017822	Freshwater Sediment	ASDLNHVDPACPMCRHVRSVLLAIADLIPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNPTNGQSFETDPLNEVKTFLNRWGIHQR
Ga0187818_101580872	3300017823	Freshwater Sediment	IEVELIGSHTSDLNHVDPACPTCRHVRSGLLAIADLMPGELTLCRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTLLNRWGIHQR
Ga0187818_102938202	3300017823	Freshwater Sediment	AIADLIPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNPTNGQSFETDPLNEVKTFLNRWGIHQR
Ga0187856_12678261	3300017925	Peatland	HGERLLVGFEVELIGSHTSDLNHVDPACPSCRHVRSVLLVIADLMPGELSLSRNSLTYNIDSHSNSIICLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKIFLNKWRIHLR
Ga0187806_13912741	3300017928	Freshwater Sediment	DLMPSELTFSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRENGQSFETDLLNEVKAFLNRWGIHQR
Ga0187849_12324501	3300017929	Peatland	PSCRHVRSVLLVIADLMPGELSLSRNSLTYNIDSHSNSIICLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR
Ga0187803_101067581	3300017934	Freshwater Sediment	DPACPICRHVRSVLLAIADLIPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTCLNRWGIHQR
Ga0187808_104329091	3300017942	Freshwater Sediment	VLLAIAGLMPGELGLSRNSLTYNIDSHSNSIICLPALGNRSAVWVSIYVFLNRANGQLFETDLLNEVKTFLNKWRIHQR
Ga0187817_103885181	3300017955	Freshwater Sediment	CRHVRSVLLAIADLMPSELTFSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTLLNRWGIHQR
Ga0187817_104840081	3300017955	Freshwater Sediment	NHVDPACPMCRHVRSVLLAIADLIPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNPTNGQSFETDPLNEVKTFLNRWGIHQR
Ga0187822_102054911	3300017994	Freshwater Sediment	ELIGFHASDLNHLDPSCPACRQVRSVLLAIADAMPMETGLSRNYLTYNIDSHSNAILCLPALGNRSAVSVSIYVFWSRSNGRSLETDLLSEIKAFLNRRGIHQR
Ga0187816_104093192	3300017995	Freshwater Sediment	VLLSIVNLVPADLALGVNTLTYNIDSHSGAILCLPALGNRSAVWVSIYLSWSRSNGQSFETDLLTEVRALLNKWGIHQR
Ga0187816_104583271	3300017995	Freshwater Sediment	LSFTYNVDSHSNSIACLPALGNRSAVWVSIYVFLNRANCQSFETDLLNEVKTFLNRWGIHQR
Ga0187876_10070948	3300018003	Peatland	ETSFRRNYLTYNIDSHSNSILCLPALGNRSAVSVSIYVVWNRSDGQSFETDLLSEIKAFLNGWGIHQR
Ga0187804_103971871	3300018006	Freshwater Sediment	GELALSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRASGQSFETDLLDEVKTFLNRWGIHQR
Ga0187805_100883513	3300018007	Freshwater Sediment	IGRLSFTYNVDSHSNSIACLPALGNRSAVWVSIYVFLNRANCQSFETDLLNEVKTFLNRWGIHQR
Ga0187810_103193692	3300018012	Freshwater Sediment	ELTLSRNSLTCNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRASGQSFETDLLDEVKTFLNRWGIHQR
Ga0187810_104615561	3300018012	Freshwater Sediment	ELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNGVKAFLNRWGIHQR
Ga0187864_1000419314	3300018022	Peatland	ELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLKRANGQSFETDLLNEVKTFLYKWGIHQR
Ga0187851_105189131	3300018046	Peatland	LSLSRNSLTYNIDSHSNSIICLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR
Ga0187784_113076181	3300018062	Tropical Peatland	MCHHVRSVLLEIVGLLHREAFPNQNRLTYEIDAHSNSVLCLPALGNRSAVSVSIYVFWNRSGGQVLETDLVSEIKAFLARWGIHQR
Ga0187772_110232902	3300018085	Tropical Peatland	CRQVRAVLLAIADLMPSQLTLSRNSLTYYIDSHSNSILCLPALGNRSAVWVSICVFMNPANGQSFETDLLNEVKTFLNKWGIRQH
Ga0187769_101276713	3300018086	Tropical Peatland	LLLKEAFLNRNRLTYEIDAHSNSVLCLSALGNRSAVSVSIYVLWNRSVGQALETDLVSELKAFLARWGIHQR
Ga0187771_109994412	3300018088	Tropical Peatland	TYNIDSHSNSIVCLPALGNRSAVWVSIYVFWNRSSGQALETDLVSELKAFLDRWGIHQR
Ga0187770_116300552	3300018090	Tropical Peatland	LTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNPANGQSFETDLLNEVKTFLNKWGIRQH
Ga0210406_110096381	3300021168	Soil	NGERHLVGFEVELIGSHESDLKHVDPSCPRCRNVRAVLLSIANLVPADLAIGVNSLSYNIDSHSDAILCLPNLGNRSAVWVSIYVSWNRSNGQSFETDLLNELRTLLNKWQIHQR
Ga0210402_113457702	3300021478	Soil	NVRAVLLSIANLVPADLALGVSSLTYNIDSHSGAILCLPALGNRSVVWVSIYLYWNRSNGQSFETDLLTEVRTLLNKWGIHQR
Ga0210402_116129912	3300021478	Soil	AVLLSIANLVPADLALGVNSLTYNIDSHSGAILCLPALGNRSAVWVSIYLSWNRSDGQWFETDLLTEVRALLNKWGIHQR
Ga0208188_10515182	3300025507	Peatland	ELRLVGFELELLGSHTSDLNHLDPACPACRHVRSVLLAIALAMPGETSFRRNYLTYNIDSHSNSILCLPALGNRSAVSVSIYVVWNRSNGQSFETDLLSEIKAFLNGWGIHQR
Ga0207646_115020601	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPGEVTLGRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFWNRANGQSFETDLLNEVKTFLNRWGIHQR
Ga0207664_109514951	3300025929	Agricultural Soil	NHVDPRCPSCRQVRAVLIAIADLVPRDSSLNVNSCTYNIDSHSNSILCLPVLGNRSAVSVSIHVSWNRSNGQSFETDLLNEVKTFLNRWRIHQR
Ga0207691_111721031	3300025940	Miscanthus Rhizosphere	DPNHLDLSCPACRHVRSVLLAIADLMPGELTHSGNSLTYNIDSHSNSIICMPALGNRSAVWVSIYVFLNRANGQSIEMDLLNGVKTFLYRWGIHQR
Ga0207712_103352221	3300025961	Switchgrass Rhizosphere	CRQVRSVLLAIADAMPRETGSRRNNLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNWSNGRSPETDVVSEIKGFLNGWGIHQR
Ga0207648_102483131	3300026089	Miscanthus Rhizosphere	ACRHVRSVLLAIADLMPGELTHSGNSLTYNIDSHSNSIICMPALGNRSAVWVSIYVFLNRANGQSIEMDLLNGVKTFLYRWGIHQR
Ga0208199_10186153	3300027497	Peatlands Soil	CPTCRHVRSVLLAIVDLMPGELTLSRNSFTYNIDPHSNSIVCLPALGNRSAVSVSIYVVWNRSNGQSFETDLLKEVKTFLNRWSIHQH
Ga0208199_11125761	3300027497	Peatlands Soil	TSDLNHVDPACPMCRHVRSVLLAIADLIPGELTLSRNSLTCNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRTNGQSFETDPLNEVKTFLNRWGIHQR
Ga0208696_11388831	3300027696	Peatlands Soil	GDRRLVGFEVELIGCHTSNLNHVDPRCPTCRTVRAALLSIANLVPADLAVGANFLTYNIDSHSGEILCLPALGNRAAVWVSIYLSWNRSNGQSLETDLLTEVRTFLNKWGIHQR
Ga0209446_11055291	3300027698	Bog Forest Soil	EVELIGSHTSDLNHVDPACPTCAHVRSVLLAIADLMLGEVHLSRNSLTYDIDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNKWGIHQR
Ga0209039_100383971	3300027825	Bog Forest Soil	VELIGSHTSDLNHVDPACPTCRHVRSVLLAIADLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVLLNRANGQSFETDLLNEVKTFLNRWGIHQH
Ga0209039_101799851	3300027825	Bog Forest Soil	VELIGSHTSDLNHVDPACPTCRHVRSVLLAIADFMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNQPNGQSFETDLLNEIKTFLNTWGIHQR
Ga0209067_104446451	3300027898	Watersheds	CHTCRHVRSALLAIADLMPSELTYRNSLTYNIDSHSNSVVCLPALGNRSAVWVSIYIFLNRANGQSFETDLLNEVKTLLSRWGIHQR
Ga0209698_100802052	3300027911	Watersheds	VLSIFPQPARETSFRRNYLTYNIDSHSNSILCLPALGNRAAVSVSIYIFWNRSNGQSCETDLLSEIKAFLDGWGIHQR
Ga0209698_102237581	3300027911	Watersheds	IDSHSNSIVCLPALGNRSAVWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR
Ga0310039_100554744	3300030706	Peatlands Soil	ERRLVGFEVELIGSHTSDLNHIDPACPTCRHVRSVLLAIAGLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLKRANGQSFETDLLNEVKTFLYKWGIHQR
Ga0170823_145745381	3300031128	Forest Soil	YNIDSHSNSIVCLPALGNRSAAWVSIYVFLNRANGQSFETDLLNEVKTFLNRWGIHQR
Ga0311301_102339661	3300032160	Peatlands Soil	RCPACRTVRAALLSIANLVPADLAVGANFPTYNIDSHSGEILCLPALGNRAAVWVSIYLSWNRSNGQSLETDLLTEVRTLLNKWGIHQR
Ga0311301_105365931	3300032160	Peatlands Soil	SLTYNIDSHSNSIVCLPALGNRSAVWVSIYVVLNQANGQSVETDLLNKVKTLLNRWGIHQ
Ga0311301_108545263	3300032160	Peatlands Soil	FEVELIGSHTSDLNHIDPACPTCRHVRSVLLAIAGLMPGELTLSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLKRANGQSFETDLLNEVKTFLYKWGIHQR
Ga0311301_122216522	3300032160	Peatlands Soil	SHTSDLNHVDPDCPTCRHVRSVLLAIADLMPSELTFSRNSLTYNIDSHSNSIVCLPALGNRSAVWVSIYVFLNRENGQSFETDLLNEVKTFLNRWGIHQR
Ga0335080_123518631	3300032828	Soil	LAIADLMPGELIFSQNSLAYRIDSHSNSIVCLPALGNRSAVWISIYVFMNQANGQSFETDLLSEVKIFLNRWGIHQR
Ga0335070_111251941	3300032829	Soil	DPGCPACRQVRSVLLAIADAMPRETSSRRNYLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNGSNGRSPETDLVSEIKAFLNGWGIHQR
Ga0310810_107403242	3300033412	Soil	DLNHLDPGCPACRQVRSVLLAIADAMPRETGSRRNNLTYNIDSHSNSILCLPALGNHSAVSVSIYVFWNWSNGRSPETDVVSEIKGFLNGWGIHQR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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