Metagenome Family F094260

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094260
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	41 residues
Representative Sequence	MVNWPEMLRHAEDWANGFWTGAATASVIGIVAAAAALISRAI
Number of Associated Samples	57
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.53 %
% of genes near scaffold ends (potentially truncated)	23.58 %
% of genes from short scaffolds (< 2000 bps)	92.45 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.151 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (43.396 % of family members)
Environment Ontology (ENVO)	Unclassified (54.717 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.811 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.29% β-sheet: 0.00% Coil/Unstructured: 45.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00202	Aminotran_3	2.83
PF04134	DCC1-like	1.89
PF04828	GFA	1.89
PF05721	PhyH	1.89
PF02771	Acyl-CoA_dh_N	0.94
PF00313	CSD	0.94
PF12697	Abhydrolase_6	0.94
PF03729	DUF308	0.94
PF01266	DAO	0.94
PF02719	Polysacc_synt_2	0.94
PF04909	Amidohydro_2	0.94
PF00083	Sugar_tr	0.94
PF00211	Guanylate_cyc	0.94
PF00903	Glyoxalase	0.94
PF00156	Pribosyltran	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.89
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.89
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.89
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	1.89
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.89
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.89
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.94
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.94
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
All Organisms	root	All Organisms	35.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
cellular organisms	root	All Organisms → cellular organisms	35.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.89 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.94 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.94 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Moritellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Moritellaceae	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.94 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.94 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.94 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Moritella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Moritellaceae → Moritella	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
unclassified Roseomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas	0.94 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.94 %
unclassified Moritella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Moritellaceae → Moritella → unclassified Moritella	0.94 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Moritella sp. Urea-trap-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Moritellaceae → Moritella → unclassified Moritella → Moritella sp. Urea-trap-13	0.94 %
Roseomonas sp. AR75	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	0.94 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.94 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.15 %
Geobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	0.94 %
Moritella sp. Urea-trap-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Moritellaceae → Moritella → unclassified Moritella → Moritella sp. Urea-trap-13	0.94 %
Roseomonas sp. AR75	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	0.94 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.94 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10241436	Not Available	734	Open in IMG/M
3300004633\|Ga0066395_10776343	Not Available	574	Open in IMG/M
3300005332\|Ga0066388_102964825	Not Available	867	Open in IMG/M
3300005332\|Ga0066388_103003442	Not Available	862	Open in IMG/M
3300005434\|Ga0070709_10712692	Not Available	781	Open in IMG/M
3300005602\|Ga0070762_11125159	Not Available	542	Open in IMG/M
3300005764\|Ga0066903_100854506	Not Available	1638	Open in IMG/M
3300005764\|Ga0066903_102614822	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300005764\|Ga0066903_105048648	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005764\|Ga0066903_106668762	Not Available	601	Open in IMG/M
3300005764\|Ga0066903_107984727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300006173\|Ga0070716_101581021	Not Available	538	Open in IMG/M
3300006755\|Ga0079222_10817247	Not Available	764	Open in IMG/M
3300006806\|Ga0079220_11338231	Not Available	603	Open in IMG/M
3300006904\|Ga0075424_100927234	Not Available	929	Open in IMG/M
3300006954\|Ga0079219_11053253	Not Available	683	Open in IMG/M
3300009792\|Ga0126374_10666411	Not Available	778	Open in IMG/M
3300009792\|Ga0126374_10725503	Not Available	750	Open in IMG/M
3300009792\|Ga0126374_11526871	Not Available	549	Open in IMG/M
3300010043\|Ga0126380_11681378	Not Available	570	Open in IMG/M
3300010046\|Ga0126384_12233142	Not Available	527	Open in IMG/M
3300010047\|Ga0126382_11629197	Not Available	599	Open in IMG/M
3300010048\|Ga0126373_10378812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1434	Open in IMG/M
3300010048\|Ga0126373_10867423	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300010048\|Ga0126373_12534017	Not Available	572	Open in IMG/M
3300010048\|Ga0126373_12908696	Not Available	534	Open in IMG/M
3300010361\|Ga0126378_10931174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300010361\|Ga0126378_11362540	Not Available	803	Open in IMG/M
3300010361\|Ga0126378_12063213	Not Available	650	Open in IMG/M
3300010361\|Ga0126378_12349049	Not Available	609	Open in IMG/M
3300010362\|Ga0126377_12260455	Not Available	620	Open in IMG/M
3300010366\|Ga0126379_10171259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2052	Open in IMG/M
3300010376\|Ga0126381_100343463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	2061	Open in IMG/M
3300010376\|Ga0126381_100711824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. AR75	1437	Open in IMG/M
3300010376\|Ga0126381_100862559	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300010376\|Ga0126381_100914534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300010376\|Ga0126381_101030585	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300010376\|Ga0126381_101313741	Not Available	1045	Open in IMG/M
3300010376\|Ga0126381_102756560	Not Available	702	Open in IMG/M
3300010376\|Ga0126381_102780387	Not Available	699	Open in IMG/M
3300010376\|Ga0126381_102919542	Not Available	680	Open in IMG/M
3300010376\|Ga0126381_104436369	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300012971\|Ga0126369_10811102	Not Available	1019	Open in IMG/M
3300012971\|Ga0126369_13580161	Not Available	509	Open in IMG/M
3300012971\|Ga0126369_13583368	Not Available	509	Open in IMG/M
3300016294\|Ga0182041_11671301	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300016357\|Ga0182032_10844923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	776	Open in IMG/M
3300017974\|Ga0187777_11395005	Not Available	517	Open in IMG/M
3300020580\|Ga0210403_10015049	All Organisms → cellular organisms → Bacteria → Proteobacteria	6221	Open in IMG/M
3300020583\|Ga0210401_10176878	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300020583\|Ga0210401_11045173	Not Available	675	Open in IMG/M
3300020583\|Ga0210401_11316941	Not Available	580	Open in IMG/M
3300021358\|Ga0213873_10034180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300021358\|Ga0213873_10061578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1017	Open in IMG/M
3300021444\|Ga0213878_10160488	Not Available	935	Open in IMG/M
3300021560\|Ga0126371_10158254	Not Available	2333	Open in IMG/M
3300021560\|Ga0126371_10176042	Not Available	2220	Open in IMG/M
3300021560\|Ga0126371_10499957	Not Available	1364	Open in IMG/M
3300021560\|Ga0126371_10567369	Not Available	1284	Open in IMG/M
3300021560\|Ga0126371_10651854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1201	Open in IMG/M
3300021560\|Ga0126371_10775491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1105	Open in IMG/M
3300021560\|Ga0126371_10912737	Not Available	1022	Open in IMG/M
3300021560\|Ga0126371_11224491	Not Available	886	Open in IMG/M
3300021560\|Ga0126371_11304428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Moritellaceae → Moritella → unclassified Moritella → Moritella sp. Urea-trap-13	859	Open in IMG/M
3300021560\|Ga0126371_11316438	Not Available	856	Open in IMG/M
3300021560\|Ga0126371_11532745	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300021560\|Ga0126371_11540472	Not Available	792	Open in IMG/M
3300021560\|Ga0126371_11641156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	768	Open in IMG/M
3300021560\|Ga0126371_11877390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300021560\|Ga0126371_11924895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300021560\|Ga0126371_11957061	Not Available	704	Open in IMG/M
3300021560\|Ga0126371_13838561	Not Available	506	Open in IMG/M
3300027874\|Ga0209465_10391913	Not Available	695	Open in IMG/M
3300031543\|Ga0318516_10376745	Not Available	818	Open in IMG/M
3300031543\|Ga0318516_10631122	Not Available	611	Open in IMG/M
3300031545\|Ga0318541_10041906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2320	Open in IMG/M
3300031561\|Ga0318528_10100206	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300031573\|Ga0310915_10160645	All Organisms → cellular organisms → Bacteria → Proteobacteria	1558	Open in IMG/M
3300031573\|Ga0310915_10494413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	869	Open in IMG/M
3300031668\|Ga0318542_10218681	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300031679\|Ga0318561_10460837	Not Available	700	Open in IMG/M
3300031680\|Ga0318574_10052561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2148	Open in IMG/M
3300031723\|Ga0318493_10508371	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031747\|Ga0318502_10171001	Not Available	1247	Open in IMG/M
3300031747\|Ga0318502_10763185	Not Available	585	Open in IMG/M
3300031770\|Ga0318521_10753115	Not Available	593	Open in IMG/M
3300031777\|Ga0318543_10132228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1089	Open in IMG/M
3300031793\|Ga0318548_10440164	Not Available	638	Open in IMG/M
3300031805\|Ga0318497_10502572	Not Available	679	Open in IMG/M
3300031805\|Ga0318497_10681851	Not Available	576	Open in IMG/M
3300031833\|Ga0310917_10006585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6125	Open in IMG/M
3300031890\|Ga0306925_11030516	Not Available	837	Open in IMG/M
3300031896\|Ga0318551_10934707	Not Available	507	Open in IMG/M
3300031910\|Ga0306923_11043372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	885	Open in IMG/M
3300031910\|Ga0306923_12237434	Not Available	547	Open in IMG/M
3300031912\|Ga0306921_10364442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1689	Open in IMG/M
3300031912\|Ga0306921_11088945	Not Available	896	Open in IMG/M
3300031941\|Ga0310912_10145174	Not Available	1787	Open in IMG/M
3300031945\|Ga0310913_10943424	Not Available	606	Open in IMG/M
3300031954\|Ga0306926_10456570	Not Available	1574	Open in IMG/M
3300031962\|Ga0307479_10376511	Not Available	1404	Open in IMG/M
3300032089\|Ga0318525_10464739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300032090\|Ga0318518_10538181	Not Available	597	Open in IMG/M
3300032261\|Ga0306920_102434405	Not Available	722	Open in IMG/M
3300033289\|Ga0310914_10907682	Not Available	780	Open in IMG/M
3300033290\|Ga0318519_10883782	Not Available	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.17%
Host-Associated	Host-Associated	2.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.17%
Plants	Host-Associated → Plants	2.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.96%
Loam	Environmental → Terrestrial → Soil → Loam	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	43.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.49%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.89%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_102414361	3300003505	Forest Soil	MINWPEMLHHAEDWANGFWAGAASASIVGIVAAAVALISHAI*
Ga0066395_107763431	3300004633	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTGAATASVIGIVAAAAALISRAV*
Ga0066388_1029648252	3300005332	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTGAATASVIGIVAAAAALISRAI*
Ga0066388_1030034421	3300005332	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTAAATASVIGIVAAAAALISRAI*
Ga0070709_107126922	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MVNWPEMLRHAEGWANGFWTGAATASVIGIVAVAAALISHAI*
Ga0070762_111251593	3300005602	Soil	MVNWPEMLRHAEDWANGFWNGAATASVIGIVAVAAALISHAI*
Ga0066903_1008545063	3300005764	Tropical Forest Soil	MVNWPEILRHAEDWANGFWIGAATASVIGIVVAAAALISRAI*
Ga0066903_1026148223	3300005764	Tropical Forest Soil	MVNWPEMLRHAEDWANAFWTGAATASVIGIVAAAAALISRAI*
Ga0066903_1050486481	3300005764	Tropical Forest Soil	LRHAEDWTNGFWTGAATASVIGIVAASAALISHAV*
Ga0066903_1066687621	3300005764	Tropical Forest Soil	MVNWPEMLRHAEDWANRFWTAAATTSVIGIVAAAAALISRAI*
Ga0066903_1079847271	3300005764	Tropical Forest Soil	MHPEQWRLHMINWPEMLRYAEGWANGFWTGAATVSVIGIVAAAAALISGAI*
Ga0070716_1015810212	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MVNWPEMLRHAEGWANGFWTGAATASVIGIVAVAAAL
Ga0079222_108172471	3300006755	Agricultural Soil	MELQMVKWPELLRHAEDWANGFWSGAATASVIAIVAAAAALISHAI*
Ga0079220_113382312	3300006806	Agricultural Soil	VLNWPEMLRPAEDWANGFWTGAVTTFAIGTVAVAAALLSYAI*
Ga0075424_1009272342	3300006904	Populus Rhizosphere	MVKWPELLRHAEDWANGFWSGAATASVIAIVAAAAALISHAI*
Ga0079219_110532532	3300006954	Agricultural Soil	MELQMVKWPELLRHAEDWANGFWSGAATASVITIVAAAAALISHAI*
Ga0126374_106664111	3300009792	Tropical Forest Soil	LRMVNWPEMLRHAEDWANGFWTGAATASVIGIVAAAAALISRAI*
Ga0126374_107255031	3300009792	Tropical Forest Soil	MVNWPEMLRHAEDWANAFWTGAVTASVIGIVAAAAALISRAI*
Ga0126374_115268712	3300009792	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTGAATASVIGIVATAAALISRAI*
Ga0126380_116813781	3300010043	Tropical Forest Soil	MITWPEVLVHAEDWANGFWTGAAAASIIGIVAAAVVVVRLAI*
Ga0126384_122331421	3300010046	Tropical Forest Soil	MEIAMVNWPEMLSHAEDWANGFWTGAATASVIAIVSAAATLISHAI*
Ga0126382_116291972	3300010047	Tropical Forest Soil	MLNWPEMLTDAEDWANSFWTGAATTSVIAIVAAAAALISHAI*
Ga0126373_103788123	3300010048	Tropical Forest Soil	MVNWPEMLRHAEDWANRFWTGAAIASVIGIVGAAAALISHAI*
Ga0126373_108674233	3300010048	Tropical Forest Soil	MVNWPEMLRHAEDWASGFWTGAATASVIGIVAAAA
Ga0126373_125340172	3300010048	Tropical Forest Soil	MVNWPEMLRHAEDWADCFWTVAGTASVLAIVAATAALISRAI*
Ga0126373_129086961	3300010048	Tropical Forest Soil	MVNWPEMLRHVEDWANGFWTGAGTASVLAIVAAAVALISHAI*
Ga0126378_109311743	3300010361	Tropical Forest Soil	VNWPEMLRHAEDWAYAFWPGAATASVIGIVAAAAALISRAI*
Ga0126378_113625401	3300010361	Tropical Forest Soil	MINWPEMLRHAEDWANGFWAGAVTTFAIGIVAAAAALLGHVI*
Ga0126378_120632132	3300010361	Tropical Forest Soil	MITWPEVLVHAEDWANGFWTGAAAALIIGIVAAAVVVVRLAI*
Ga0126378_123490491	3300010361	Tropical Forest Soil	MEIAMVNWPEMLRHAEDWANRFWTGTATASAIAIVAAAAALISRAI*
Ga0126377_122604552	3300010362	Tropical Forest Soil	MINWPEMLRHAEDWANAFWTGAATASVIGIVAAAAALISRAI*
Ga0126379_101712593	3300010366	Tropical Forest Soil	MVNWPEMLRHAEDWANRFWTGAAIASVVGIVGAAAALISHAI*
Ga0126381_1003434632	3300010376	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTGAATTSVIGVVAAAAALISRAI*
Ga0126381_1007118242	3300010376	Tropical Forest Soil	MVNWPEMLRHAEDWASGFWTGAAAASVIGIVAAAAALISRAI*
Ga0126381_1008625591	3300010376	Tropical Forest Soil	MVNWPEMQHAEHWANGLWTGAATASVIGIVAATAALISRAI*
Ga0126381_1009145343	3300010376	Tropical Forest Soil	MINWPEMLRHAEDWANGFWAGAVTTFAIGIVAAAAALLSHVI*
Ga0126381_1010305851	3300010376	Tropical Forest Soil	MINWPEMLRHAEDWTNGFWTGAATASVIGIVAASAALISHAV*
Ga0126381_1013137411	3300010376	Tropical Forest Soil	MLRDAENWANSFWTGAATASVIGIVAAAAALISRA
Ga0126381_1027565601	3300010376	Tropical Forest Soil	MVNWPEMLRHAEDWAKGFWTGAATASVIGIVAAAAAMIGHAI*
Ga0126381_1027803872	3300010376	Tropical Forest Soil	MITWPEVLVHAEDWANGFWTGAAAASIIGIVAAAVVVRLAI*
Ga0126381_1029195421	3300010376	Tropical Forest Soil	MVNWPEMLRHAEDWASGFWTGAATASVIAIVAGAAALISRAI*
Ga0126381_1044363691	3300010376	Tropical Forest Soil	MINWPEMLRYAEGWANGFWTGAATVSVIGIVAAAAALISGAI*
Ga0126369_108111021	3300012971	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTGAVTASVIGIVAAAAALISRAI*
Ga0126369_135801612	3300012971	Tropical Forest Soil	MVNWSEMLRHVEDWANGFWTGAGTASVLAIVTAAVALISHAI*
Ga0126369_135833681	3300012971	Tropical Forest Soil	MVNWPEMLRYAEDWANGFWTGAATASVMGIVAAAAALISHAI*
Ga0182041_116713012	3300016294	Soil	LQMINWPEMLRHAEDWTNGFWAGAVTTFAIGVVAAGAVLLSHVI
Ga0182032_108449231	3300016357	Soil	MVNWPEMLSHAEDWANGFWTGAATASVIGIVAAAAALISRAI
Ga0187777_113950052	3300017974	Tropical Peatland	MINWPETLRHAEDWANGFWAGAVTTFAIGIVAAAAALLGHVI
Ga0210403_100150494	3300020580	Soil	MVNWPEMLRHAEDWANGFWNGAATASVIGIVAVAAALISHAI
Ga0210401_101768782	3300020583	Soil	MINWPEMLHHAEDWANGFWAGAASASIVGIVAAAVALISHAI
Ga0210401_110451732	3300020583	Soil	MINWPEMLHHAEDWAAGFWAGAATTFVMGIVAAAAALLSHAI
Ga0210401_113169411	3300020583	Soil	MFNWPEMLRHAEDWASGFWTGAAAASLTGIIVAAVALFAHTI
Ga0213873_100341801	3300021358	Rhizosphere	MINWPEMLRHAEDWANGFWTGAATTFALGIIAVAAALLTHVI
Ga0213873_100615781	3300021358	Rhizosphere	MINWPEMLRYAEDWANGFWTGAVTASMIGIVAAAAALISRAI
Ga0213878_101604881	3300021444	Bulk Soil	MLLHAEDWANGFWTGAATGFAIGIVAAAAALLSHVI
Ga0126371_101582541	3300021560	Tropical Forest Soil	MLRHAEDWANGFWTGAATTPVIGVVAAAAALISRAI
Ga0126371_101760423	3300021560	Tropical Forest Soil	MINWPEMLRHAEDWANGFWAGAVTTFAIGIVAAAAALLSHVI
Ga0126371_104999572	3300021560	Tropical Forest Soil	MVNWPEMLRDAEDWANSFWTGAATASVIGIVAVAAALISHAI
Ga0126371_105673691	3300021560	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTGAATASVIGIVATAAALISRAI
Ga0126371_106518543	3300021560	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWSGAATASVIGIVAAVAVLISRAI
Ga0126371_107754913	3300021560	Tropical Forest Soil	MVNWPEMLRHAEDWAKGFWTGAATASVIGIVAAAAVLISRAI
Ga0126371_109127372	3300021560	Tropical Forest Soil	MVNWPEMLTDAEDWANSFWTGAATASVIGIVAVAAALISHAI
Ga0126371_112244912	3300021560	Tropical Forest Soil	MVNWPEMLRHAEDWANGFWTGAATASVIGIVATAA
Ga0126371_113044281	3300021560	Tropical Forest Soil	DMLRHAEGWANGFWTGAATASVMGIVAAAAALISHAI
Ga0126371_113164382	3300021560	Tropical Forest Soil	MITWPEVLVHAEDWANGFWTGAAAASIIGIVAAAVVVAI
Ga0126371_115327452	3300021560	Tropical Forest Soil	MVNWPEMLRHAEDWASGFWTGAATASVIAIVAGAAALISRAI
Ga0126371_115404721	3300021560	Tropical Forest Soil	MINWPEMLRHAEDWANGFWTGAATASMIGIVAAAVALISRAI
Ga0126371_116411561	3300021560	Tropical Forest Soil	MINWPETLSHAEDWANGFWAGAVTTFAIGIVAAAAALLGHVI
Ga0126371_118773902	3300021560	Tropical Forest Soil	WRLQMVNWPEMLRHAEDWASGFWTGAATALVMGVVAAAAALISRAI
Ga0126371_119248952	3300021560	Tropical Forest Soil	MVNWPEMLRHVEDWANGFWTGAGTASVLAIVAAAVALISRAI
Ga0126371_119570611	3300021560	Tropical Forest Soil	MVNWPEMLRHAEDWANRFWTGAAIASVVGIVGAAAALISHAI
Ga0126371_138385611	3300021560	Tropical Forest Soil	MVNWPEMLRYAEDWANGFWTGAATASVMGIVAAAAALISHAI
Ga0209465_103919131	3300027874	Tropical Forest Soil	MVNWPEMLRHAEDWADCFWTVAGTASVLAIVAATAALISRAI
Ga0318516_103767452	3300031543	Soil	MVNWPEMLRHAEDWAKGFWTGAAAASVIGIVAAAAALISRTI
Ga0318516_106311221	3300031543	Soil	MVNWPEMLRHAEDWANAFWTGAATASVIGIVAAAAALISRAI
Ga0318541_100419062	3300031545	Soil	MINWPEMLRHAEDWTNGFWAGAVTTFAIGVVAAGAVLLSHVI
Ga0318528_101002062	3300031561	Soil	MITWPEVLRHAEDWANGFWTGAVTTFAIGVVAAGAVLLSHVF
Ga0310915_101606454	3300031573	Soil	MINWPEIFRNAEPWANGFWTGAAAASVVGIIGAVGVLISHAI
Ga0310915_104944132	3300031573	Soil	MVNWPEMLRHAEDWANGFWTGAATASVIGIVTAAAALISRAI
Ga0318542_102186812	3300031668	Soil	MINWPEILRNAEPWANGFWTGAAAASVVGIMGAVAVLISHAI
Ga0318561_104608371	3300031679	Soil	MVNWPEMLRHAEDWANGFWTGAATASMLGIVAAAAALISRAI
Ga0318574_100525613	3300031680	Soil	MITWPEVLRHAEDWANGFWTGAVTTFAIGVAAAGAVLLSHVF
Ga0318493_105083711	3300031723	Soil	VLRHAEDWANGFWTGAVTTFAIGVAAAGAVLLSHVF
Ga0318502_101710014	3300031747	Soil	MVNWPEMLRHAEDWAKGFWTGAAAASVIGIVAAAAALISRT
Ga0318502_107631852	3300031747	Soil	EWRLKMVNWPEMLRHAEDWAKGFWTGAAAASVIGIVAAAAALISRTI
Ga0318521_107531152	3300031770	Soil	MINWPEMLRHAEDWANGFWTGAVTTFAIGIVAAAAALLTHVI
Ga0318543_101322283	3300031777	Soil	PEVLRHAEDWANGFWTGAVTTFAIGVAAAGAVLLSHVF
Ga0318548_104401642	3300031793	Soil	LKMVNWPEMLRHAEDWAKGFWTGAAAASVIGIVAAAAALISRTI
Ga0318497_105025721	3300031805	Soil	MINWPEIFRNAEPWANGFWTGAAAASVLGIMGAVAVLISHAI
Ga0318497_106818511	3300031805	Soil	PEMLRHADDWANGFWTGAATASVIGIVAAAAALISRAI
Ga0310917_100065855	3300031833	Soil	MVNWPEMLRHAEDWAKGFWTGAAAASVIGIVAAAAALISRAI
Ga0306925_110305161	3300031890	Soil	MINWPETLRHAEDWANGFWAGAVTTFAIGIVVAAAALLSHVI
Ga0318551_109347072	3300031896	Soil	MVNWPEMLRHAEDWANGFWTAAATASVIGIVAAAA
Ga0306923_110433722	3300031910	Soil	WRLQMINWPETLRHAEDWANGFWAGAVTTFAIGIVVAAAALLSHVI
Ga0306923_122374342	3300031910	Soil	MVNWPEMLRHAEDWANGFWTGAATASVIGIVAAAAALISRAI
Ga0306921_103644421	3300031912	Soil	MINWPEIFRNAEPWANGFWTGAAAASVVGIIGAVAVLISHAI
Ga0306921_110889451	3300031912	Soil	MINWPETLRHAEDWANGFWAGAVTTFAIGIVAAAAALLSHVI
Ga0310912_101451742	3300031941	Soil	MINWPEIFRNAEPWANGFWTGAAAASVVGIMGAVAVLISHAI
Ga0310913_109434241	3300031945	Soil	PEIFRNAEPWANGFWTGAAAASVVGIMGAVAVLISHAI
Ga0306926_104565702	3300031954	Soil	MINWPEMLRHAEDWTNGFWTGAITTFAIGVAAAGAVLLSHVI
Ga0307479_103765111	3300031962	Hardwood Forest Soil	MINWPEMLHHAEDWAAGFWAGAVTTFVMGIVAAAAA
Ga0318525_104647393	3300032089	Soil	PEMLRHAEDWASGFWTGAATASVIAIVAGAAALISRAI
Ga0318518_105381812	3300032090	Soil	PKRWRLKMVNWPEMLRHAEDWAKGFWTGAAAASVIGIVAAAAALISRTI
Ga0306920_1024344051	3300032261	Soil	MVNWPEMLRHVEDWANGFWTGAGTASVLAIAAAAVALTSRVI
Ga0310914_109076821	3300033289	Soil	MINWPEIFRNAEPWANGFWTGAAAASVVGIMGAVAVLI
Ga0318519_108837821	3300033290	Soil	MINWPEIFRNAEPWANGFWTGAAAASVVGIMGAVAVL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094260

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences