Metagenome / Metatranscriptome Family F094342

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094342
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	106 residues
Representative Sequence	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Number of Associated Samples	95
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.75 %
% of genes near scaffold ends (potentially truncated)	30.19 %
% of genes from short scaffolds (< 2000 bps)	93.40 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.057 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.377 % of family members)
Environment Ontology (ENVO)	Unclassified (29.245 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.79% β-sheet: 0.00% Coil/Unstructured: 54.21%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF03411	Peptidase_M74	3.77
PF05239	PRC	0.94
PF03969	AFG1_ATPase	0.94
PF13202	EF-hand_5	0.94
PF00440	TetR_N	0.94
PF00892	EamA	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	3.77
COG1485	Cell division protein ZapE (Z ring-associated ATPase), AFG1 superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	99.06 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	95.28 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.83 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	92.45 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.83 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	1.89 %
Unclassified	root	N/A	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	92.45 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.83 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	1.89 %
Unclassified	root	N/A	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000044\|ARSoilOldRDRAFT_c029281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	506	Open in IMG/M
3300004114\|Ga0062593_101584630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	710	Open in IMG/M
3300004480\|Ga0062592_101871050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	589	Open in IMG/M
3300004643\|Ga0062591_100751289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	891	Open in IMG/M
3300005093\|Ga0062594_101153813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	763	Open in IMG/M
3300005168\|Ga0066809_10052681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	915	Open in IMG/M
3300005169\|Ga0066810_10012129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1300	Open in IMG/M
3300005185\|Ga0066811_1002551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1001	Open in IMG/M
3300005340\|Ga0070689_101110637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	707	Open in IMG/M
3300005364\|Ga0070673_101994334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	551	Open in IMG/M
3300005438\|Ga0070701_10402477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	868	Open in IMG/M
3300005549\|Ga0070704_102296857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	502	Open in IMG/M
3300005614\|Ga0068856_101723640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	639	Open in IMG/M
3300005713\|Ga0066905_100710615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	863	Open in IMG/M
3300005842\|Ga0068858_102018001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	570	Open in IMG/M
3300005844\|Ga0068862_101676136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	644	Open in IMG/M
3300006172\|Ga0075018_10241359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	872	Open in IMG/M
3300006175\|Ga0070712_100304529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1291	Open in IMG/M
3300006852\|Ga0075433_10532079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1034	Open in IMG/M
3300006854\|Ga0075425_100175120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2462	Open in IMG/M
3300006854\|Ga0075425_102689472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	549	Open in IMG/M
3300006904\|Ga0075424_102329421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	562	Open in IMG/M
3300007076\|Ga0075435_100797929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	822	Open in IMG/M
3300009091\|Ga0102851_12344368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	609	Open in IMG/M
3300009094\|Ga0111539_10682522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1196	Open in IMG/M
3300009094\|Ga0111539_10908200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1024	Open in IMG/M
3300009094\|Ga0111539_10985807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	980	Open in IMG/M
3300009147\|Ga0114129_11314724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	895	Open in IMG/M
3300009156\|Ga0111538_12834058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	607	Open in IMG/M
3300009162\|Ga0075423_10405703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1431	Open in IMG/M
3300009177\|Ga0105248_12312980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	612	Open in IMG/M
3300009553\|Ga0105249_11875282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	672	Open in IMG/M
3300010043\|Ga0126380_10154601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1475	Open in IMG/M
3300010047\|Ga0126382_10109957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1803	Open in IMG/M
3300010359\|Ga0126376_10626114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1022	Open in IMG/M
3300010362\|Ga0126377_10138278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2274	Open in IMG/M
3300010373\|Ga0134128_12509767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	568	Open in IMG/M
3300010399\|Ga0134127_12797904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	567	Open in IMG/M
3300010400\|Ga0134122_12238993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	591	Open in IMG/M
3300012476\|Ga0157344_1001574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1107	Open in IMG/M
3300012483\|Ga0157337_1014765	Not Available	658	Open in IMG/M
3300012491\|Ga0157329_1002476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1056	Open in IMG/M
3300012507\|Ga0157342_1027452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	699	Open in IMG/M
3300012510\|Ga0157316_1019251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	730	Open in IMG/M
3300012515\|Ga0157338_1014840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	844	Open in IMG/M
3300012941\|Ga0162652_100053842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	660	Open in IMG/M
3300012948\|Ga0126375_10867954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	722	Open in IMG/M
3300012951\|Ga0164300_10003031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	4387	Open in IMG/M
3300012955\|Ga0164298_10345748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	940	Open in IMG/M
3300012958\|Ga0164299_11381011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	543	Open in IMG/M
3300012960\|Ga0164301_11130092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	625	Open in IMG/M
3300012964\|Ga0153916_12934860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	537	Open in IMG/M
3300012984\|Ga0164309_10164466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1491	Open in IMG/M
3300012988\|Ga0164306_10700320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	805	Open in IMG/M
3300013297\|Ga0157378_10628549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1088	Open in IMG/M
3300014326\|Ga0157380_12780059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	556	Open in IMG/M
3300015371\|Ga0132258_11939414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1482	Open in IMG/M
3300015371\|Ga0132258_12517938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1287	Open in IMG/M
3300015371\|Ga0132258_12541638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1280	Open in IMG/M
3300015371\|Ga0132258_13492950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1077	Open in IMG/M
3300015373\|Ga0132257_100202742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2351	Open in IMG/M
3300015373\|Ga0132257_100816990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1164	Open in IMG/M
3300015374\|Ga0132255_102052419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	871	Open in IMG/M
3300015374\|Ga0132255_106297477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	502	Open in IMG/M
3300017792\|Ga0163161_10860949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	765	Open in IMG/M
3300018028\|Ga0184608_10188687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	900	Open in IMG/M
3300018072\|Ga0184635_10206936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	782	Open in IMG/M
3300018081\|Ga0184625_10219414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	997	Open in IMG/M
3300019356\|Ga0173481_10324616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	725	Open in IMG/M
3300020579\|Ga0210407_10692524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	791	Open in IMG/M
3300021168\|Ga0210406_10953532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	642	Open in IMG/M
3300021478\|Ga0210402_10427931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1230	Open in IMG/M
3300022508\|Ga0222728_1077194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	600	Open in IMG/M
3300022534\|Ga0224452_1149720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	719	Open in IMG/M
3300022726\|Ga0242654_10242474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	643	Open in IMG/M
3300025901\|Ga0207688_10695035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	643	Open in IMG/M
3300025936\|Ga0207670_11888957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	508	Open in IMG/M
3300025961\|Ga0207712_11471227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	610	Open in IMG/M
3300025972\|Ga0207668_10117351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2009	Open in IMG/M
3300026089\|Ga0207648_10995496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	785	Open in IMG/M
3300026118\|Ga0207675_100777281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	970	Open in IMG/M
3300027523\|Ga0208890_1016913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1022	Open in IMG/M
3300027717\|Ga0209998_10011010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1872	Open in IMG/M
3300028380\|Ga0268265_10986355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	832	Open in IMG/M
3300028587\|Ga0247828_10451056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	753	Open in IMG/M
3300028589\|Ga0247818_10876648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	630	Open in IMG/M
3300028711\|Ga0307293_10233620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	585	Open in IMG/M
3300028809\|Ga0247824_11134287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	501	Open in IMG/M
3300030336\|Ga0247826_11528512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	542	Open in IMG/M
3300031122\|Ga0170822_14620476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	564	Open in IMG/M
3300031170\|Ga0307498_10003738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	2566	Open in IMG/M
3300031198\|Ga0307500_10044432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1053	Open in IMG/M
3300031226\|Ga0307497_10001524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5788	Open in IMG/M
3300031231\|Ga0170824_109396616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	616	Open in IMG/M
3300031446\|Ga0170820_11487356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1023	Open in IMG/M
3300031474\|Ga0170818_103652693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1202	Open in IMG/M
3300031547\|Ga0310887_10362133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	844	Open in IMG/M
3300031720\|Ga0307469_10935846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	805	Open in IMG/M
3300031720\|Ga0307469_12206762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	536	Open in IMG/M
3300031847\|Ga0310907_10899957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	500	Open in IMG/M
3300031908\|Ga0310900_11271449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	614	Open in IMG/M
3300031944\|Ga0310884_10201048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1064	Open in IMG/M
3300032205\|Ga0307472_102019196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	578	Open in IMG/M
3300033551\|Ga0247830_10225135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1410	Open in IMG/M
3300033551\|Ga0247830_10394075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1077	Open in IMG/M
3300033551\|Ga0247830_11093786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	636	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.38%
Host-Associated	Host-Associated	39.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.77%
Plants	Host-Associated → Plants	39.62%
Aquatic	Environmental → Aquatic	6.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.92%
Sediment	Environmental → Aquatic → Sediment	4.72%
Freshwater	Environmental → Aquatic → Freshwater	1.89%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.55%
Loam	Environmental → Terrestrial → Soil → Loam	5.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.15%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	5.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARSoilOldRDRAFT_0292812	3300000044	Arabidopsis Rhizosphere	MAKVLTPDEALRIVRNIARTPSLNTRETPSKPANELEVLIRDRLPDPVRRHLVDVIINHTEIDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELXTED*
Ga0062593_1015846302	3300004114	Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0062592_1018710501	3300004480	Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKKTPSKPANELEGLIRAKLPDSVRRHLIDVIIDPVDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLREYDLLTDD*
Ga0062591_1007512892	3300004643	Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0062594_1011538131	3300005093	Soil	VLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMF
Ga0066809_100526812	3300005168	Soil	RNDAHMAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGESIRAMFEVLRDYDLLTDD*
Ga0066810_100121293	3300005169	Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGESIRAMFEVLRDYDLLTDD*
Ga0066811_10025512	3300005185	Soil	MAKVLTQDEALRMASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGESIRAMFEVLRDYDLLTDD*
Ga0070689_1011106372	3300005340	Switchgrass Rhizosphere	VLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD*
Ga0070673_1019943341	3300005364	Switchgrass Rhizosphere	VLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWSHEVGNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0070701_104024773	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RAISVDVLRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIVDRTDGDGLTANWTAQPVWNHDVSNDDKREFTSALFAVLRDYELLTDD*
Ga0070704_1022968571	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAKVLTQDEALRIASNIARAANLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0068856_1017236402	3300005614	Corn Rhizosphere	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWSHEVGNNDKGEFIRAMFQVLRDYDLLTDD*
Ga0066905_1007106151	3300005713	Tropical Forest Soil	HMAKVLTQDEALRIVSNIARAPNLNARDLSKTPSKPANELEALIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQAVWGHEVSNNDKGEFIWAMFEVLRDYDLLTDD*
Ga0068858_1020180011	3300005842	Switchgrass Rhizosphere	ALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD*
Ga0068862_1016761361	3300005844	Switchgrass Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0075018_102413592	3300006172	Watersheds	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWNHDVTNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0070712_1003045292	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAKVLTQEEALRIASNIARAPHLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDDYA*
Ga0075433_105320792	3300006852	Populus Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHDVSNNDKGEFIRTMFEVLRVIC*
Ga0075425_1001751204	3300006854	Populus Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFKVLRDYDLLTDD*
Ga0075425_1026894721	3300006854	Populus Rhizosphere	MAKVLTPDEALRIVRNIARTPSLNTRETPSKPANELEVLIRDRLPDPVRRHLVDVIINRTDIDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLT
Ga0075424_1023294211	3300006904	Populus Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWNHDVSNEVLPEYDLLTDE*
Ga0075435_1007979292	3300007076	Populus Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDTDGLAANWTAQPLWSHEVSNNDKAEFIGAMFGVLRDYDLLTDD*
Ga0102851_123443681	3300009091	Freshwater Wetlands	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSQEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0111539_106825221	3300009094	Populus Rhizosphere	MAKVLTPDEALRIVRNIARTPSLNTRETPSKPANELEVLIRDRLPDPVRRHLVDVIINHTEIDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLTED*
Ga0111539_109082002	3300009094	Populus Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMLKGLRDYDLLTED*
Ga0111539_109858072	3300009094	Populus Rhizosphere	AKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTNADGLAANWTAQAVWGHEVSNNDKGEFIWAMFEVLRDYDLLTDD*
Ga0114129_113147241	3300009147	Populus Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPVDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLREYDLLTDD*
Ga0111538_128340581	3300009156	Populus Rhizosphere	MAKVLTPDEALRIVRNIARTPSLNTRETPSKPANELEVLIRDRLPDPVRRHLVDVIINRTDIDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLTED*
Ga0075423_104057034	3300009162	Populus Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDTGEFIRAMFKVLRDYDLLTDD*
Ga0105248_123129801	3300009177	Switchgrass Rhizosphere	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0105249_118752821	3300009553	Switchgrass Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0126380_101546012	3300010043	Tropical Forest Soil	MAKVLTQDEALRIVSNIARAPNLNARDLSKTPSKPANELEALIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWGHEVSNNDKGEFIWAMFEVLRDYDLLTDD*
Ga0126382_101099573	3300010047	Tropical Forest Soil	MAKVLTQDEALRIVSNIARAPNLNARDSSKTPSKPANELEALIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQAVWGHEVSNNDKGEFIWAMFEALRDYDLLTDD*
Ga0126376_106261141	3300010359	Tropical Forest Soil	MAKVLTQDEALRIVSNIARAPNLNATDLSKTPSKPANELEALIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQAVWGHEVSNNDKGEFIWAMFEVLRDYDLLTDD*
Ga0126377_101382781	3300010362	Tropical Forest Soil	MAKVLTQDEALRIVSNIARAPNLNARDLSKTPSKPANELEALIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQAVWGHEVSNNDKGEFIWAMFEVLRDYDLLTDD*
Ga0134128_125097671	3300010373	Terrestrial Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSNEVSNNDKREFIRAMFEVLRDYDLLTDD*
Ga0134127_127979041	3300010399	Terrestrial Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD*
Ga0134122_122389931	3300010400	Terrestrial Soil	VLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDDYA*
Ga0157344_10015742	3300012476	Arabidopsis Rhizosphere	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRAKLPDPVRRHLIDVIIDPIDTDGLAANWTAQPLWSHEVSNNDKAEFIRAMFGVLRDYDLLTDD*
Ga0157337_10147651	3300012483	Arabidopsis Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPPNELEELIRAKLPDPVRRHLVDVIINHTEIDGLGPNWTAQPIWNHEVSINDKSSLVRCSRFFGTMNC*
Ga0157329_10024762	3300012491	Arabidopsis Rhizosphere	MAKVLTPDEALRIVRNIARTPSLNTRETPSKPANKLEVLIRDRLPDPVRRHLVDVIINRTDIDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLTED*
Ga0157342_10274521	3300012507	Arabidopsis Rhizosphere	MAKVLTQHEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRAKLPDPVRRHLIDVIIDPIDTDGLAANWTAQPLWSHEVSNNDKAEFIGAMFGVLRDYDLLTDD*
Ga0157316_10192512	3300012510	Arabidopsis Rhizosphere	MAKVLTPDEALRIVRNIARTPSSKTRETPSKPANELEVLIRDRLPDPVRRHLVDVIINHIEIDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLTED*
Ga0157338_10148401	3300012515	Arabidopsis Rhizosphere	MAKVLTPDEALRIVRNIARTPSLNTRETPSKPANELEVLIRDRLPDPVRRHLVDVIINRTEIEGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLTED*
Ga0162652_1000538422	3300012941	Soil	MAKVLTQDEALRIVSNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0126375_108679541	3300012948	Tropical Forest Soil	MAKVLTQDEALRIVSNIARAPNLNARDLSKTPSKPANELEALIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQAVWGHEVSNNDKGEFIWAMFEALRDYDLLTDD*
Ga0164300_100030313	3300012951	Soil	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD*
Ga0164298_103457482	3300012955	Soil	VLTQEEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWGHEVSNSDKGEFIWAMFE
Ga0164299_113810112	3300012958	Soil	TQDEALRLASNIARTRNLSARDSSKTPSKPANELAGIIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWNHDVSNNDKGEFIRAMFEILRDYDLLTDE*
Ga0164301_111300921	3300012960	Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPGWRHEVSNNDKGEFIRAMFEVL
Ga0153916_129348601	3300012964	Freshwater Wetlands	DLKVCDANGQSLAYVYARDNRIDARMAKVLTQDEALRIASNITRAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0164309_101644662	3300012984	Soil	MAKVLTQDEALRLASNIARTRNLSARDSPKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD*
Ga0164306_107003201	3300012988	Soil	KVLTQDEALRIVSKIARAPNRNARDSSKTPSKHANALEGLIRDKLPDPVRRYLIDVIIDRTDADGLAANWTAQPVWNHDVSNNDKGEFIRAMFEILRDYDLLTDE*
Ga0157378_106285493	3300013297	Miscanthus Rhizosphere	VLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHDVSNNDKREFISALFAVLRDYELLTDD*
Ga0157380_127800591	3300014326	Switchgrass Rhizosphere	IEPPSFATSTRENRNDADMAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD*
Ga0132258_119394142	3300015371	Arabidopsis Rhizosphere	VLTQDEALRIASNIARAPNLNARDSSKTPSKPAAELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWNHEVSNNDKGEFIRAMFEVLRDYDLLTDD*
Ga0132258_125179381	3300015371	Arabidopsis Rhizosphere	MAKVLTQDEALRIASNIARERLNARDSSKTPSKPANELEGLIRDKLPDSVRRHLIDVIIDRTDADGLGPNWTAHPVWSHEVSDNDKGEFIRAMFDVLRDYDLLTDD*
Ga0132258_125416381	3300015371	Arabidopsis Rhizosphere	MPKVLTQDEALRIAINIARAPTNLNARDSSKTPSKPANELEGLIRAKLPDPVRLHLIDVIIDPIDTDGLAANWTAQPLWSHEVSNNDKAEFIRAMFGV
Ga0132258_134929502	3300015371	Arabidopsis Rhizosphere	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELAGLIRDKLPDPVRRHLIDVIIDHIAVDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLTDD*
Ga0132257_1002027421	3300015373	Arabidopsis Rhizosphere	MAKVLTPDEALRIVRNIARTPSLNTRETPSKPANELEVLIRDRLPDPVRRHLVDVIINHIEIDGLGPNWTAQPIWNHEVSNNDKQEFTSALFAVLRDYELLTED*
Ga0132257_1008169902	3300015373	Arabidopsis Rhizosphere	MPKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRAKLPDPVRRHLIDVIIDPIDTDGLAANWTAQPLWSHEVSNNDKAEFIGAMFGVLRDYDLLTDD*
Ga0132255_1020524192	3300015374	Arabidopsis Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFGVLRDYDLLTDD*
Ga0132255_1062974771	3300015374	Arabidopsis Rhizosphere	LRIASNIARAPNLNARDSSKTPSKPANELEGLIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPLWSHEVSNNDKAEFIRAMFGVLRDYDLLTDD*
Ga0163161_108609491	3300017792	Switchgrass Rhizosphere	MAKVLTQDEALRIASNIARAANLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDL
Ga0184608_101886872	3300018028	Groundwater Sediment	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIERTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0184635_102069362	3300018072	Groundwater Sediment	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGQIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLFTDD
Ga0184625_102194142	3300018081	Groundwater Sediment	MAKVLTQDEALRMASNIARAPNLNARDSSKTPSKPANELEGLILDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0173481_103246162	3300019356	Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLREYDLLTDD
Ga0210407_106925241	3300020579	Soil	MAKVLNREEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWNAQPVWSHNVSNKDKREFTRALFEILREYDLLTDD
Ga0210406_109535322	3300021168	Soil	MAKVLNREEALRIASNIARASNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVCNKDKREFIRAMFEVLRDYDLLTDD
Ga0210402_104279311	3300021478	Soil	MAKVLTQEEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVCNKDKREFIRAMFEVLRDYDL
Ga0222728_10771941	3300022508	Soil	MAKVLTQEEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRSDADGLAANWTAQPVWNHDVSNNDKGEFIRAMFEILRDYDLLTDE
Ga0224452_11497201	3300022534	Groundwater Sediment	VLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDVDGLGPNWTAQPVWSHDVSNNDKREFISALFEVLRDYDC
Ga0242654_102424742	3300022726	Soil	MAKVLTQKEALRVASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIVDRTDADGLAANWTAQPVWNHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0207688_106950351	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VLTQDEALRIASNIARAANLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVGNNDKGEFIRAMFEVLRDYDLL
Ga0207670_118889571	3300025936	Switchgrass Rhizosphere	VLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD
Ga0207712_114712272	3300025961	Switchgrass Rhizosphere	AHMAKVLTQDEALRIASNIARAPNLNAKDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0207668_101173514	3300025972	Switchgrass Rhizosphere	MTGAVFLPAPECAHMAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWSHEVGNNDKGEFIRAMFEVLRDYDLLTD
Ga0207648_109954961	3300026089	Miscanthus Rhizosphere	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVGQHLIDVIIDHIDADGLAANWTAQPVWNHNVSNNDKREFTSPLFEVLRDYDLLTDD
Ga0207675_1007772813	3300026118	Switchgrass Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD
Ga0208890_10169133	3300027523	Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGESIRAMFEVLRDYDLLTDD
Ga0209998_100110103	3300027717	Arabidopsis Thaliana Rhizosphere	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEELIRAKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDLTC
Ga0268265_109863551	3300028380	Switchgrass Rhizosphere	MAKVLTQDEALRIASNIARAANLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0247828_104510561	3300028587	Soil	MAKVLTQDEALRIASKIARAPTLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVFIDRTDADGLTANWTAQPVWNHEVSNNDKGEFTRALFEVLRDYDLLTDD
Ga0247818_108766482	3300028589	Soil	DEALRIASNIASAANLNARDSSKTPSKPANELEGLMRARLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWGHEVSNNDKAEFIRAMFEVLRDYDLLTDD
Ga0307293_102336201	3300028711	Soil	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD
Ga0247824_111342871	3300028809	Soil	RIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWNHEVSNNDKGEFTRALFEVLRDYDLLTDD
Ga0247826_115285121	3300030336	Soil	DDALRIASNIARAPNQNARDSSKTPSKPANELEGLIRAKLPDPVRRHLVDVIIDHTDVDGLGPNWTAQPIWNHDVSNNDKAEFIRAMFEVLRDYDLLTDD
Ga0170822_146204761	3300031122	Forest Soil	RNDAHMAKITQEEALRIASNIARAPNLKARDSSKTPSKPANELEGLIRDKLPDSVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0307498_100037384	3300031170	Soil	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWNHEVRNGDKGEFIRAMFEVLRDYDLLTDD
Ga0307500_100444322	3300031198	Soil	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0307497_100015245	3300031226	Soil	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDRGEFIRAMFQVLRDYDLLTDD
Ga0170824_1093966161	3300031231	Forest Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0170820_114873563	3300031446	Forest Soil	MAKVLTQEEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0170818_1036526933	3300031474	Forest Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWNHEVTNNDKGEFIRAMFEVLRDYDLLTDD
Ga0310887_103621332	3300031547	Soil	MAKVLTQDEALRIASKIARAPTLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD
Ga0307469_109358461	3300031720	Hardwood Forest Soil	MAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWSHEVSNNDKAEFIRAMFEVLRDYDLLTDD
Ga0307469_122067621	3300031720	Hardwood Forest Soil	MAKVLTQDEALRMASKIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKAEFIRAM
Ga0310907_108999572	3300031847	Soil	MAKVLTQDEALHIASNIARSPNLHARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVFIDRTDADGLAANWTAQPVWSHEVSNNDKGEFIRAMFEVLRDYDLLTDD
Ga0310900_112714491	3300031908	Soil	TQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDKGEFIRAMFQVLRDYDLLTDD
Ga0310884_102010481	3300031944	Soil	MAKVLTQDEALRLASNIARTRNLSARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDHIAADGLAANWTAQPVWSHEVSNNDK
Ga0307472_1020191961	3300032205	Hardwood Forest Soil	ANSQSLAYVYSRENPNDARMAKVLTQDEALRIASNIARAPNLNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLAANWTAQPVWSHEVSNNDKAEFIRAMFEVLRDYDLLTDD
Ga0247830_102251352	3300033551	Soil	MAKVLTQDEALRIASNIARAANLNARDSSKTPSKPANELEGLMRARLPDPVRRHLIDVIIDPIDADGLAANWTAQPVWGHEVSNNDKAEFIRAMFEVLRDYDLLTDD
Ga0247830_103940752	3300033551	Soil	MAKVLTQDEALRIASKIARAPNARDSSKTPSKPANELEGLIRDKLPDPVRRHLIDVLIDRTDADGLTANWTAQPVWNHEVSNNDKGEFTRALFEVLRDYDLLTDD
Ga0247830_110937861	3300033551	Soil	LTQDEALRIASKIARAPTLNARDSSTPSKPANELEGLIRDKLPDPVRRHLIDVIIDRTDADGLTANWTAQPVWNHEVSNNDKGEFIRAMFEVLRDYDLLTDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094342

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences