Metagenome Family F094355

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094355
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	123 residues
Representative Sequence	AALVRYLRSQLGSDARLVVACTQFTTTRDFLLVRHSLTPGADYSELHDALRRLGTVVELPFESTFVIQSDDRTDVRTLGAALGELCPDESLMVTGISHDWAYCNSGTSRMFVADALEDAQFKSF
Number of Associated Samples	94
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.94 %
% of genes near scaffold ends (potentially truncated)	99.06 %
% of genes from short scaffolds (< 2000 bps)	94.34 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.094 % of family members)
Environment Ontology (ENVO)	Unclassified (38.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.283 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.74% β-sheet: 26.97% Coil/Unstructured: 53.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00854	PTR2	15.09
PF13533	Biotin_lipoyl_2	8.49
PF12700	HlyD_2	4.72
PF00529	CusB_dom_1	3.77
PF16576	HlyD_D23	3.77
PF02684	LpxB	0.94
PF00931	NB-ARC	0.94
PF07690	MFS_1	0.94
PF09586	YfhO	0.94
PF02698	DUF218	0.94
PF13640	2OG-FeII_Oxy_3	0.94
PF07228	SpoIIE	0.94
PF05985	EutC	0.94
PF03641	Lysine_decarbox	0.94
PF12704	MacB_PCD	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	15.09
COG0763	Lipid A disaccharide synthetase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.94
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.94
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	92.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	92.45 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	92.45 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10421601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300002568\|C688J35102_118221437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300002568\|C688J35102_119678221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300002568\|C688J35102_120963742	All Organisms → cellular organisms → Bacteria	3344	Open in IMG/M
3300003987\|Ga0055471_10144118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300005171\|Ga0066677_10058467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1949	Open in IMG/M
3300005177\|Ga0066690_10319634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300005181\|Ga0066678_10197255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300005187\|Ga0066675_10111984	All Organisms → cellular organisms → Bacteria → Proteobacteria	1820	Open in IMG/M
3300005293\|Ga0065715_10096406	All Organisms → cellular organisms → Bacteria	3883	Open in IMG/M
3300005293\|Ga0065715_10182373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1467	Open in IMG/M
3300005331\|Ga0070670_102121304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005333\|Ga0070677_10700540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300005334\|Ga0068869_100400383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300005336\|Ga0070680_101217221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300005367\|Ga0070667_101718838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005434\|Ga0070709_11036736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300005436\|Ga0070713_102037689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005445\|Ga0070708_100127809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2350	Open in IMG/M
3300005447\|Ga0066689_10421332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300005468\|Ga0070707_100035275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4772	Open in IMG/M
3300005468\|Ga0070707_101260837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300005535\|Ga0070684_100776009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300005547\|Ga0070693_100696858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300005560\|Ga0066670_10736132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300005575\|Ga0066702_10069242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1946	Open in IMG/M
3300005577\|Ga0068857_102109957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300005587\|Ga0066654_10223663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300005598\|Ga0066706_10191256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1567	Open in IMG/M
3300005616\|Ga0068852_102831115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300005834\|Ga0068851_10462466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300005840\|Ga0068870_10355973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300006169\|Ga0082029_1696099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300006173\|Ga0070716_101328731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300006237\|Ga0097621_100903713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300006847\|Ga0075431_100282007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300006904\|Ga0075424_100837809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300006954\|Ga0079219_11934888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300007004\|Ga0079218_10734340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300009012\|Ga0066710_100059620	All Organisms → cellular organisms → Bacteria	4804	Open in IMG/M
3300009089\|Ga0099828_10958842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300009137\|Ga0066709_104105039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010336\|Ga0134071_10404116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300010337\|Ga0134062_10291024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300010397\|Ga0134124_12593152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300010399\|Ga0134127_12511029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300010403\|Ga0134123_10015948	All Organisms → cellular organisms → Bacteria	5226	Open in IMG/M
3300011269\|Ga0137392_11360400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300011269\|Ga0137392_11493125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300011271\|Ga0137393_10385282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300011427\|Ga0137448_1066897	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300012096\|Ga0137389_11378624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300012198\|Ga0137364_11166795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012203\|Ga0137399_11390988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012208\|Ga0137376_10301913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300012208\|Ga0137376_10822153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300012285\|Ga0137370_10609571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300012285\|Ga0137370_10811409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012354\|Ga0137366_11024579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300012360\|Ga0137375_11120308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300012668\|Ga0157216_10230893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300012922\|Ga0137394_10717511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300012925\|Ga0137419_11715303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300012955\|Ga0164298_11624470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300013102\|Ga0157371_11232083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300013105\|Ga0157369_11332120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300013503\|Ga0120127_10016214	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300014157\|Ga0134078_10178981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300014166\|Ga0134079_10372478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300014487\|Ga0182000_10330089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300014487\|Ga0182000_10692013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300017927\|Ga0187824_10344891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300017937\|Ga0187809_10432785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300018466\|Ga0190268_10546063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300018468\|Ga0066662_10358214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1259	Open in IMG/M
3300018482\|Ga0066669_11784377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300020215\|Ga0196963_10226942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300021067\|Ga0196978_1113493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300021088\|Ga0210404_10331791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300021372\|Ga0213877_10290219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300021418\|Ga0193695_1067644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300021953\|Ga0213880_10094767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300023268\|Ga0247765_1063102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300025906\|Ga0207699_10921783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300025922\|Ga0207646_10743774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300025927\|Ga0207687_10589470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300025960\|Ga0207651_11667145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300026041\|Ga0207639_10262708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1511	Open in IMG/M
3300026116\|Ga0207674_11868848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300026335\|Ga0209804_1119406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300026547\|Ga0209156_10128526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300026550\|Ga0209474_10758428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300026552\|Ga0209577_10253887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300027846\|Ga0209180_10591192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300027880\|Ga0209481_10268157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300031720\|Ga0307469_11833208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300031720\|Ga0307469_12240287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031740\|Ga0307468_100854372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300031740\|Ga0307468_100884621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300031740\|Ga0307468_102286359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300031824\|Ga0307413_11791977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300032005\|Ga0307411_11258751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300032126\|Ga0307415_102075534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300032126\|Ga0307415_102390083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300032955\|Ga0335076_10849309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300034026\|Ga0334946_093796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.36%
Host-Associated	Host-Associated	22.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.58%
Plants	Host-Associated → Plants	22.64%
Aquatic	Environmental → Aquatic	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.49%
Freshwater	Environmental → Aquatic → Freshwater	1.89%
Marine	Environmental → Aquatic → Marine	0.94%
Sediment	Environmental → Aquatic → Sediment	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.94%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.77%
Loam	Environmental → Terrestrial → Soil → Loam	15.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.89%
Sand	Environmental → Terrestrial → Soil → Sand	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.77%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.89%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.94%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.94%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.94%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_104216012	3300001686	Soil	AELLVRYMRIEVGDEARVLIGCSQFTSTRDFLLIRHSLTPGADYSELHDAINRLGVVVDLPFESTFVVQSDDRTDVKTLGMALGELCPDDALFITGISHDWAYCDGTTSRMYVTEQEPKSIQFRTF*
C688J35102_1182214371	3300002568	Soil	NFDQSWQVWLDETRHAAPLVRWMRTQLGAGARLLVAATQFTKRRDFLLVRHSLTPGADYSELHDAVHRLGVVVELPFESTFVVQYPDRTDVQTLGLALGELCPDASLMVTGISHDWAYCDGSVSRMHVAAAEDLAGMFREF*
C688J35102_1196782211	3300002568	Soil	GRHAAALVRYLRSRLGDDARLLVGCTQFTTARDFLLVRHSLTSGADYSELHEALDRLGVFVPLPFDSTFVIQSSDRTDVQTLGAALSELCPDESLMINGISHDWAFCDGGMSRMYVADAVEELTFRTF*
C688J35102_1209637424	3300002568	Soil	LPEGGHAELLVRYLRIEVGDEARVLIGCSQFTSTRDFLLIRHSLTPGADYSELHDAIARLGVVVDLPFESTFVVQSDDRTDVNTLGMALGELCPDDALFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF*
Ga0055471_101441182	3300003987	Natural And Restored Wetlands	EAKLMVACTQFTTARDFLLVRHSLTPGADYAELHDALERLGTVVELPFESAVVIRPDPRTDVQSDVTTLGLALSELCPDDSLMAVGISHDWAFSNSGVSRMFVGSRDARTEQFRTF*
Ga0066677_100584671	3300005171	Soil	VRYLRSRIGEDARLLVACAQFTTTRDFLLIRHSQTPGADYSELHDAIARLGTAVELPFESTFIVQSSDPTDVQTLGLAFGELCPDDSLMVLGVSHDWAYSDAGVSQMHVAAEAVELQFRAF*
Ga0066690_103196342	3300005177	Soil	RHAAALVRWLRPHVAIDSRLLVACTQFTTSRDFLLIRHSLTPNADYRELHDAIGRLGTIVELPFESTFVVMSVDHTDLNTLGLALGELCPDDSLMVIGIGHDWAFCDSGVSRMYLPAVARQVQFRSF*
Ga0066678_101972551	3300005181	Soil	EPSFDQSWHVWLTEERHAAALVRWLRPHVSADARLLVACTQFTTARDFLLIRHSLTLDADYRELHDAIDRLGTIVDLPFEATFVVQSGDRTDAATLGLALGELCPDDSLMVVGINHDWAYCHSGVSRMHLAGVAERIQFKSF*
Ga0066675_101119843	3300005187	Soil	QSWYVWLSEERHAAPITRWLRSQIDHNARLIVACTQFTTSRDFLLIRHSLTPDADYSELHDAVERLGMVVELPFESTFVVQSDDRTDVRTLGRALGELCPDDSLMVTGVNHDWAYCDAGVSRMHVAAAADALQFREF*
Ga0065715_100964064	3300005293	Miscanthus Rhizosphere	SAALVRYLRAQLGSDARLVVACTQFTTTRDFLLVRHSLTPGADYSELHDALHRLGTVVELPFESTFVIQTDDRTDVRTLGAALGELCPDESLMVTGVSHDWAYCNSGQSRMFVADEVPDAQFKSF*
Ga0065715_101823731	3300005293	Miscanthus Rhizosphere	HSAALVRYLRSHLGHDARLLVACAQFTTARDFLLVRHSLTPGADYSELQEAMEYLGMIVPLPFESTFVIQSDDRTDVQTLGAALAELCPDESLMINGVSHDWAYCNAGTSQMYVADAMEELTFRTF*
Ga0070670_1021213041	3300005331	Switchgrass Rhizosphere	LLVACAQFTTARDFLLVRHSLTPGADYSELQEAMEYLGMIVPLPFESTFVIQSDDRTDVQTLGQALSELCPDESLMINGISHDWAYCNSGESRMFVADDEVEELSFRTF*
Ga0070677_107005401	3300005333	Miscanthus Rhizosphere	RYLRSNLGHDSRLLVACTQFTTARDFLLVRHSLTPGADYSELHDALDRLGMVLPLPFESTFVVQSDDCTDVQTLGSALAELCPDESLMINGISHDWAYCNSGESRMFVADDEVEELTFRTF*
Ga0068869_1004003832	3300005334	Miscanthus Rhizosphere	NFDQSWQVFLPEGRHSAPLVRYIRSHIAHESRILVACTQFTTARDFLLVRHSLTPGADYSELHDALHRLGTVVHLPFESTFVVQSDDRTDVNSLGRALSELCPDEELMLTGISHDWAFCNSGMSRMFVASDAEFAQFRAF*
Ga0070680_1012172212	3300005336	Corn Rhizosphere	DDARLLVACTQFSIARDFLLVRHSLTPGADYSELHDALHRLGTVVHLPFESTFVLQSEDRTDVQTLGRALAELCPDESLMLTGISHDWAFCNSGKSRMFVAGEAELAQFRSF*
Ga0070667_1017188381	3300005367	Switchgrass Rhizosphere	YLRSKLGDDARLLVACAQFTTARDFLLVRHSLTPGADYSELHEALDRLGAFVPLPFDSTFVIQSDDRTDVQTLGAALSELCPDDSLMINGISHDWAFCDAGMSRMYVADAVEELTFRTF*
Ga0070709_110367362	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AALVRWLRRNVSPNARLLVACTQFTTARDFLLIRHSMTPNADYRELHEAIARLGVIVELPFESTFVVQSDDRTDLATLGAALGELCPDDSLMAVGISHDWAYCDSGVSRMYLPARSAHDTRFRSF*
Ga0070713_1020376892	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	YLRTQVDGDARLIVGAAHFTTARDFLLVRHSLTPGADYSELHDALDRLGTVVELPFESAFVIQSDDRTDVSTLGEALGELCPDDSLMVVGMSHDWAYSDGRVSRMHVAAAESEALMFRTF
Ga0070708_1001278092	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	YVWLTEERHAAALVRWLRPHVAVDARLLVACTQFTTSRDFLLIRHSLTPDADYRELHGAIARLGVVVELPFESTFVVQSDDRTDVATLGEALGELCPDDSLMVVGISHDWAYCDSGVSHMNMVAGLAGCQIVRY*
Ga0066689_104213321	3300005447	Soil	FDQSWHVWLTEERHAAALVRWLRPRVAIDGRMLVACTQFTTSRDFLLIRHSLTPNADYRELHDAIGRLGTIVDLPFESTFVVQSDDRTDVNTLGLALGELCPDDSLMVIGIGHDWAFCDSGVSRMYLPAVARQVQFRSF*
Ga0070707_1000352756	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DARILVACTQFTTARDFLMIRHSTTPNADYRELHEAIARLGNVVDLPFESTFVVQSEDHTDVTTLGAALGELCPDDALMVVGISHDWAYCDSGVSRMNLVVGLSGCQVVRF*
Ga0070707_1012608372	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	QSWHIWLAGGRHAAPLVRWLRPHVPADARLFVACTQFTTSRDFLLVRHSMTPGANYSELHSAMARLGSVADVPFESTFVIRSDDRTDLQTLGRALGELCPDDSLMVVGINHDWAYCQSGMSRMHVAATRAPELQFRGF*
Ga0070684_1007760091	3300005535	Corn Rhizosphere	AAPLVRYLRSKLGDDARLLVACAQFTTARDFLLVRHSLTPGADYSELHEALDRLGAFVPLPFDSTFVIQSDDRTDVQTLGAALSELCPDDSLMINGISHDWAFCDAGMSRMYVADAVEELTFRTF*
Ga0070693_1006968582	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	YLRSHLGAEARLLVANTQFTTARDFLLVRHSLTPDADYRELHEAMEYLGMVVPLPFESTFVIQSDDRTDVQTLGAALSELCPDESLMLNGISHDWAYSNSGTSRMYVADSLEELSFRTF*
Ga0066670_107361321	3300005560	Soil	IEVGDDARVLIGCSQFTTTRDFLLIRHSLTAGADYSELHDAIARLGVVVELPFESTFVIQSDDRTDVQTLGLALGELCPDDALMVTGISHDWAYCDGTTSRMYVAAQEPKALQFRTF*
Ga0066702_100692423	3300005575	Soil	HAAPLVRWMRRHVALDARLLVACTQFTSARDFLLIRHSLTPNADYGELHDAIGRLGIVVDLPFESMFVVQSSDRTDLETLGRALGELCPDDSLMVVGISHDWAFCDAGVSRMNLVSSVTGCQVVRY*
Ga0068857_1021099572	3300005577	Corn Rhizosphere	DARLLVACAQFTTARDFLLVRHSHTPGADYSELQEAMEYLGMIVPLPFESTFVIQSDDRTDVQTLGAALAELCPDESLMINGISHDWAYCNAGTSQMYVADAMEELTFRTF*
Ga0066654_102236631	3300005587	Soil	GDEARVLIGCSQFTKMRDFLLIRHSLTPGADYSELHDAIGRLGVVVDLPFESTFVIQSDDRTDVNTLGMALGELCPDDALFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF*
Ga0066706_101912561	3300005598	Soil	WLRPHVAIDSRLLVACTQFTTSRDFLLIRHSLTPNADYRELHDAIGRLGTIVELPFESTFVVMSVDHTDLNTLGLALGELCPDDSLMVIGIGHDWAFCDSGVSRMYLPAVARQVQFRSF*
Ga0068852_1028311151	3300005616	Corn Rhizosphere	RYIRANLDDESRLLVGCMQFTTSRDFLLVRHSLTPGADYSELHDAIARLGDVIPLPFESTFVVQSNDTTDVQTLGAALGELCPDDSLMVAGISHDWAYCNDGRSRMYVTADDEHAYPTFRAF*
Ga0068851_104624661	3300005834	Corn Rhizosphere	APLVRYLRSHVDEDAKLLVACTQFTTARDFLLVRHSLTPGADYSELHEAIERLGVIVPLPFDSTFVIQSDDRTDVQTLGQALAELCPDESLMINGVSHDWAFSDAGYSRMFVATTADEELRFKSF*
Ga0068870_103559732	3300005840	Miscanthus Rhizosphere	EGRHSAALVRYLRSHLGHDARLLVACAQFTTARDFLLVRHSLTPGADYSELQEAMEYLGMIVPLPFESTFVIQSDDRTDVQTLGAALAELCPDESLMINGISHDWAYCNAGTSQMYVADAMEELTFRTF*
Ga0082029_16960991	3300006169	Termite Nest	LVRYLRAQLASESRLLVACTQFTTARDFLLVRHSLTPGADYSELHDALHRLGTVVELPFESTFVIQTDDRTAVRTLGAALGELCPDESLMVTGISHDWAYCNSGQSRMFVADELEEAQFKSF*
Ga0070716_1013287312	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DQSWQVWLPEGRHAAPLVRYVRAHLADDSRLLVGCMQFTTSRDFLLVRHSMTMGNDYSELHDAIARLGDVIPLPFESTFVVQSNDRTDVQTLGLALGELCPDDSLMVSGISHDWAFCNDGASRMYVNADEVNQYPQFRRF*
Ga0097621_1009037132	3300006237	Miscanthus Rhizosphere	VLVGCSQFTRDFLLIRHSLTPGSDYSELHDAIARLGIVVELPFESTFVVQSTDRTDVNTLGRALGELCPDDGLFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF*
Ga0075431_1002820071	3300006847	Populus Rhizosphere	FLPEGRHAAPLVRYLRAQFSSDSRVLVACTQFTTTRDFLLVRHSMTPGADYSELHDALDRLGTIVELPFESAFVIQSDDRTDVKTLGNALGELCPDESLMVTGISHDWAFCYAGTSRMFVAADAEEAQFKQF*
Ga0075424_1008378091	3300006904	Populus Rhizosphere	CTQFTTARDFLLVRHSLTPNADYSELHDALHRLGVVVHLPFESTFVIQSDDRTDVQSLGRALSELCPDEELMLTGISHDWSFCNSGMSRMFVAGDAEYAQFKAF*
Ga0079219_119348881	3300006954	Agricultural Soil	AALVRYLRSQLGSDARLVVACTQFTTTRDFLLVRHSLTPGADYSELHDALRRLGTVVELPFESTFVIQSDDRTDVRTLGAALGELCPDESLMVTGISHDWAYCNSGTSRMFVADALEDAQFKSF*
Ga0079218_107343401	3300007004	Agricultural Soil	RYLRAQTAADAKLLVACTQFTTARDFLLVRHSLTPGADYSELHDALDRLGTVVALPFESTFVIQSLYATEMRTDVNTLGLALGELCPDESLMVTGISHDWAYSESGISRMFVGDAFE*
Ga0066710_1000596201	3300009012	Grasslands Soil	RILVACTQFTTTRDFLMIRHSMTPNADYRELHEAIARLGVVVDLPFEATFVIQSTDRTDVSTLGAALGQLCPDDSLMVVGISHDWAYCDSGVSRMNLVVWLSGCQVVRF
Ga0099828_109588421	3300009089	Vadose Zone Soil	HAAPLVRWLRPHVPADARLLVACTQFTTSRDFLLVRHSMTPGANYSELHSAMARLGSVADVPFESTFVIRSDDRTDLQTLGRALGELCPDDSLMVVGINHDWAYCQSGMSRMHVAATRAPELQFRGF*
Ga0066709_1041050391	3300009137	Grasslands Soil	GRHAAPLVRWLRPHVPADARLLVACTQFTTSRDFLLIRHSTTPGANYSELHRAMARLGSVVDVPFESTFVIRSDDRTDLQTLGRALGELCPDDSLMVVGINHDWAYCQSGMSRMHVAATRAPELQFRGF*
Ga0134071_104041161	3300010336	Grasslands Soil	EERHAAALVRWLLPHVALDSRLLAACTQFTSARDFLLIRHSMTPNADYRELHDAIARLGMIVDLPFESTFVVQSDDRTDLNTLGLALGELCPDDSLMVIGVSHDWAFCHSGVSKMNMATGVTGCQVVRY*
Ga0134062_102910242	3300010337	Grasslands Soil	WQVWLTEERHAAPIVRWLRRHVAYDSRLLVACTQFTNARDFLLIRHSLTPNADYTELHDAIARLGTIVELPFESMFVVQSSDRTDLETLGRALGELCPDDSLMVVGVNHDWAFCNAGVSRMNLGSAVTGCQVVRY*
Ga0134124_125931521	3300010397	Terrestrial Soil	SRLGEDARLLVACTQFTTARDFLLVRHSLTPGADYSELHEALDRLGVFVPLPFDSTFVIQSDDRTDVQSLGAALSELCPDDSLMINGISHDWAYCNSGESRMFVADDEVEELSFRTF*
Ga0134127_125110291	3300010399	Terrestrial Soil	LVRYIRSHISDETRLLVACTQFTTARDFLLVRHSLTPGADYSELHDALHRLGVVVHLPFESAFVVQSEDRTDVQTLGRALSELCPDEELMLTGISHDWAFCNSGMSRMFVASDAEFAQFRAF*
Ga0134123_100159486	3300010403	Terrestrial Soil	FIRSHISDEARLLVACTQFTIARDFLLVRHSMTPHADYSELHDALQRLGTVVHLPFESTFVLQSDDRTDVQTLGRALGELCPDDSLMVTGISHDWAVCNSGMSRMFVATEAEIAQFRAF*
Ga0137392_113604001	3300011269	Vadose Zone Soil	FTRARDFLLVRHSLTPGCDYSELHDAILRLGVIIEVPFDSTYVIQSSDRTDVHTLGLALGELCPDESLMITGISHDWAYCADAISRMHVASALEAGTHFRTF*
Ga0137392_114931251	3300011269	Vadose Zone Soil	EGGHAELLVRYLRIEVGDEARVLVGCSQFTTTRDFLLIRHSLTPGSDYGELHDALARLGVVVELPFESTFVVQSDDRTDVQTLGLALGELCPDDALMVTGISHDWAYCDGTTSLMFVADQEPKSLQFRSF*
Ga0137393_103852821	3300011271	Vadose Zone Soil	EARVLVGCSQFTTTRDFLLIRHSLTPGSDYGELHDALARLGVVVELPFESTFVVQSDDRTDVQTLGLALGELCPDDALMVTGISHDWAYCDGTTSRMFVADQEPKSLQFRSF*
Ga0137448_10668972	3300011427	Soil	VWLSEERHAAPLVRWLRSQIDDDARLLVACSQFTIARDFLLIRHSLTPDADYSELHDAIHRLGLVVELPFESTFVIQSDDRTDVQTLGRALGELCPDDALMVTGISHDWAYSDAGVSQMCVADAADALQFRTF*
Ga0137389_113786241	3300012096	Vadose Zone Soil	APLVRYLRAHVGTDARLLVACTQFITSRDFLLVRHSLTPGADYSELHSALERLGVVVEIPFESTFVIQSDDRTDVGTLGRALCELCPDDALMVTGISHDWAYCDEGESRMFVGGEQARDAQFRPF*
Ga0137364_111667951	3300012198	Vadose Zone Soil	QRHAAALVRWLRRNVAFESRVLVACTQFTTARDFLLIRHSLTPNANYGELHDAIARLGTVVELPFESMFVVQSADRTDLETLGRALGELCPDDSLMVVGISHDWAFCDAGVSKMNLVSGAAGCQVVRY*
Ga0137399_113909881	3300012203	Vadose Zone Soil	RHAAPLVRWLRPHVPADARLLVACTQFTTSRDFLLIRHSTTPGANYSELHRAMARLGSVADVPFESTFLIRSDDRTDLQTLGRALGELCPDDSLMVVGINHDWAYCQSGMSRMHVAATRAPELQFRGF*
Ga0137376_103019132	3300012208	Vadose Zone Soil	VAQDGRILVACTQFTTARDFLLVRHSMTPSADYRELHEAIARLGVIVDLPFESTFVVQSDDRTDLATLGAALGELCPDDSLMVVGMSHDWAYCDSGVSRMYLAAPSAHDTPFRSF*
Ga0137376_108221532	3300012208	Vadose Zone Soil	MRRLGAEPCFDQSWHVWLTEERHAAALVRWLRRNVALESRVLVACTQFTTARDFLLIRHSLTPNADYGELHDAIARLGTIVELPFESMFVVQPSDGTDLETLGRALGELCPDDSLMVVGISHDWAFCD
Ga0137370_106095711	3300012285	Vadose Zone Soil	GADARLLVASTQFTIARDFLLVRHSLTPGADYGELHDAIHRLGVVVELPFESTFVVQSDDRTDVQTLGLALGELCPDASLMVTGISHDWAYCDGGVSRMHVAAAEDLAGMFREF*
Ga0137370_108114092	3300012285	Vadose Zone Soil	MRRLGAEPCFDQSWHVWLTEERHAAALVRWLRRNVALESRVLVACTQFTTARDFLLIRHSLTPNADYGELHDAIARLGTIVELPFESMFVVQSSDRTDLETLGRALGELCPDDSLMVVGISHDWAFCDA
Ga0137366_110245791	3300012354	Vadose Zone Soil	VWLTEERHSAALVRWLRPHVAVNSRLLVACTQFTTSRDFLLIRHSLTPDGDYRELHDAIARLGLVVDLPFEATFVVQSEDHTDVGTLGRALGELCPDDSLMVIGINHDWAYCDSGVSRMHIAGLAERFQFRAF*
Ga0137375_111203081	3300012360	Vadose Zone Soil	EGRHAAPLVRWMRTQLGADARLLVAATQFTTARDFLLVRHSLTPGADYRELHDAVARLGVVVELPFESTFVVQSDDCTDVQTLGLALGELCPDASLMVTGISHDWAYCDGDVSRRHVAAAEDAEGMFRGF*
Ga0157216_102308931	3300012668	Glacier Forefield Soil	EGRHAAPLVRYLRSQTAPDSRLLVACTQFTVARDFLLVRHSLTPGADYSELHDALDRLGTVVALPFESTFVIQSLYATEMRTDVNTLGLALGELCPDESLMVTGISHDWAYSDSGVSRMFVGDAFEEAVFKTF*
Ga0137394_107175112	3300012922	Vadose Zone Soil	VRWLRPHVPADARLLVACTQFTTSRDFLLVRHSMTPGANYSELHSAMARLGNVADVPFESTFVIRSDDRTDLQTLGRALGELCPDDSLDICGIHPHLALFQARKGRMHVAATRAPELQFRGF*
Ga0137419_117153032	3300012925	Vadose Zone Soil	LVACTQFTTARDFLLIRHSMTPNADYRELHEAIARLGVIVDLPFESTFVVQSDDHTDLTTLGAALGELCPDDSLMVIGISHDWAYCDSGVSRMNLAATTAQQIRFRPF*
Ga0164298_116244701	3300012955	Soil	ELLVRYLRIEVGEEARVLIGCSQFTSTRDFLLIRHSLTPGADYSELHDAIGRLGVVVDLPFESTFVVQSDDRTDVNTLGMALGELCPDDALFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF*
Ga0157371_112320832	3300013102	Corn Rhizosphere	PEGRHAAPLVRYLRSRLGEDARLLVACAQFTTTRDFLLIRHSQTPGADYSELHDAIARLGTVVELPFESTFIVQSSDPTDVQTLGLAFGELCPDDSLMVLGVSHDWAFSDAGVSQMHVAAEAELGLQFRTF*
Ga0157369_113321202	3300013105	Corn Rhizosphere	LVARTQFSTARDFLLIRHSLTPGADYRELHDAIERLGIVVELPFESTFVVRSSDSTDVQTLGRALGELCPDESLMVTGVSHDWAFCNSGVSRMYVADEGEQRILLRSF*
Ga0120127_100162141	3300013503	Permafrost	VACTNFTPTRDFLLVRHSLTPGADYGELHGAIERLGTVVDLPFETTFVVRSSDNTDVETLGSALGELCPDDSLMVIGMSHDFAFFNAGESRMFLPPDLAAPRWDFRSF*
Ga0134078_101789811	3300014157	Grasslands Soil	LVASIQFTATRDFLLVRHSLTPGADYTELHDALDRLGTVVPLPFESTFVIQSDDRTDVKTLGLALGELCPDESLMVTGISHDWAFCNSGVSRMHVSADTTAKQPQFRTF*
Ga0134079_103724782	3300014166	Grasslands Soil	ARVLVASMQFTMSRDFLLVRHSLTTGADYTELHDALERLGTMVPLPFDSTFIIQSDDRTDVQTLGAALGELCPDESLMVTGISHDWAYCNSGVSRMHVAADAARAAFREF*
Ga0182000_103300892	3300014487	Soil	PEGRHAAPLVRYLRANIGEEPRLLVACTHLTTARDFLLVRHSQTPGADYSELHDALERLGVVVALPFESTFVIQPDDRTDVQTLGAALAELCPDESLMITGISHDWAYCDSGISRMFVGAEPAELAFRQF*
Ga0182000_106920131	3300014487	Soil	LPEGRHAAPLVRYLRQQLGGEPRLIVACTQFTTARDFLLVRHSLTPGADYSELHDALERLGVVIPLPFESTFVLQSNDRTDVRTLGLALGELCPDESLMVTGISHDWAYCDGRESRMFVASEIEEMQFKTF*
Ga0187824_103448912	3300017927	Freshwater Sediment	VRWLRRNVAFDSRLLIACTQFTSARDFLLIRHSLTQGADYRELHDAIARLGTIIDLPFESTFVVQSDDRTELNTLGRALGELCPDDSLMAVGISHDWAFCNAGVSKMNVGSDLRSSVFYD
Ga0187809_104327851	3300017937	Freshwater Sediment	PLVRWMRRHVALDSRLLVACTQFTSARDFLLIRQSLTAGANYSELHDAIARLGTVVDLPFESTFVVQSTDRTDLETLGRALGELCPDDSLMVVGVSHDWAFCNAGVSKMNLVGAATGCQVVRY
Ga0190268_105460632	3300018466	Soil	ACSQFTTTRDFLLVRHSLTPGADYSELHDGLRRLGTVVELPFESAFVIQSDDRTDVQTLGAALGELCPDESLMVTGISHDWAYCNSGDSRMFVADALEEAQFKAF
Ga0066662_103582141	3300018468	Grasslands Soil	HVWLAEGRHAAPLVRWVRPHVSADARLLVACIQFTSARDFLLVRHSLTPGADYSELHEALDRLGAFVPLPFDSTFVIQSDDRTDVQTLGAALSELCPDDSLMINGISHDWAFCDAGLSRMYVADAVEELTFRAF
Ga0066669_117843772	3300018482	Grasslands Soil	HFTTARDFLLIRHSQTDGADYAELHSAIGRLGPIIDLPFESAFVVQSDDRTDVQTLGLALGELCPDDSLMVVGISHDWAYCNSGVSRMHVAADRLSAGLQFRTF
Ga0196963_102269422	3300020215	Soil	RHAAPLVRYLRTSLGADARLLVACTHFTTARDFLLVRHSLTPGADYSELHDALHRLGTVVELPFESTFVIQSEDRTDVQTLGAALGELCPDESLMVTGISHDWAYCNSGDSRMFVADALEDAQFKSF
Ga0196978_11134931	3300021067	Soil	FLPEGRHAAPLVRYLRSQTAPESRLLVACTQFTTARDFLLVRHSLTPGADYSELHDALDRLGTVIPLPFESAFVIQSLYATQMRTDVHTLGLALGELCPDESLMVTGISHDWAYCDAGESRMFVGDAFEEPVFKSF
Ga0210404_103317911	3300021088	Soil	FDQSWHVWLTEERHAAALVRWLRRHVALDSRLLVACTQFTSARDFLLIRHSLTPSADYSELHDAIARLGIVVELPFESMFVVQSSDPTDLETLGRALSELCPDDSLMVVGISHDWAFCDAGVSKMNLFSGVTGCQVVRY
Ga0213877_102902191	3300021372	Bulk Soil	NFDQSWQVWLPEGRHAAPLIRYLRSNIGDDSRLLVANTQFSSRRDFLLIRHSLTDGGDYRDLHDAIERLGDVLPLPFESMFVVRSEDRTDVQTLGRALGELCPDDSLMVTGISHDWAYCNSGVSRMHVAAGADAETEFRRF
Ga0193695_10676441	3300021418	Soil	ISADARLLVACTQFTSARDFLLVRHSLTPGADYSELHGALGRLGGVVALPFESTFVIRSDDRTDLRTLGLGLGELCPDDSLMVLGINHDWAYCDSGMSRMHVAAARAPDLQFRGF
Ga0213880_100947671	3300021953	Exposed Rock	DQSWQVWLPEGRHAAPLIRYLRSHVGADARLLVASAHFSTARDFLLIRHSLTSGGDYRELHHAIERLGTIVDLPFDSTFVVRSDDRTDVQTLGLALGELCPDDSLMVIGINHDWAFCDAGISRMHVALGERDDAQFRRF
Ga0247765_10631022	3300023268	Plant Litter	LRQSIGDDARILVAGTQFTSSRDFLLVRHSLTPGGDYSELHDALERLGIVAELPFESTFVIQSDDRTDLQTLGEALGELCPDDSLMVVGISHDWAYCNSGISRMHVADDSVEMLFRSF
Ga0207699_109217832	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AAALVRWLRRNVSPNARLLVACTQFTTARDFLLIRHSMTPNADYRELHEAIARLGVIVELPFESTFVVQSDDRTDLATLGAALGELCPDDSLMAVGISHDWAYCDSGVSRMYLPARSAHDTRFRSF
Ga0207646_107437742	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ILVACTQFTTARDFLMIRHSTTPNADYRELHEAIARLGNVVDLPFESTFVVQSEDHTDVTTLGAALGELCPDDALMVVGISHDWAYCDSGVSRMNLVVGLSGCQVVRF
Ga0207687_105894702	3300025927	Miscanthus Rhizosphere	RANLSDEARVLVASMQFTSSRDFLLVRHSLTTGADYSELHDALDRLGDVVPLPFDSTFIVQSDDRTDLQTLGRALGELCPDESLMVTGISHDWAYCNSGVSRMHVIADVVTRRPQFRSF
Ga0207651_116671451	3300025960	Switchgrass Rhizosphere	VLIGCSQFTSTRDFLLIRHSLTPGADYSELHDAIARLGVVVDLPFESTFVVQSDDRTDVNTLGMALGELCPDDALFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF
Ga0207639_102627081	3300026041	Corn Rhizosphere	IEVGEDARVLVGCSQFTSTRDFLLIRHSLTPGSDYSELHDAIARLGVVVELPFESTFVVQSGDRTDVNTLGRALGELCPDDGLFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF
Ga0207674_118688481	3300026116	Corn Rhizosphere	HLGHDARLLVACAQFTTARDFLLVRHSHTPGADYSELQEAMEYLGMIVPLPFESTFVIQSDDRTDVQTLGAALAELCPDESLMINGISHDWAYCNAGTSQMYVADAMEELTFRTF
Ga0209804_11194062	3300026335	Soil	LLVRYLRIEVGDEARVLIGCSQFTSSRDFLLIRHSLTPGADYSELHDAIARLGVVVDLPFESTFVVQSDDRTDVNTLGMALGELCPDDALFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF
Ga0209156_101285261	3300026547	Soil	QSWYVWLSEERHAAPITRWLRSQIDHNARLIVACTQFTTSRDFLLIRHSLTPDADYSELHDAVERLGMVVELPFESTFVVQSDDRTDVRTLGRALGELCPDDSLMVTGVNHDWAYCDAGVSRMHVAAAADALQFREF
Ga0209474_107584281	3300026550	Soil	LPEGGHAELLVRYLRIEVGDEARVLIGCSQFTSTRDFLLIRHSLTSGADYSELHDAIARLGVVVDLPFESTFVVQSDDRTDVNTLGMALGELCPDDALFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF
Ga0209577_102538872	3300026552	Soil	IGCSQFTSSRDFLLIRHSLTPGADYSELHDAIARLGVVVDLPFESTFVVQSDDRTDVNTLGMALGELCPDDALFVTGISHDWAYCDGTTSRMYVAEQEPKSIQFRTF
Ga0209180_105911921	3300027846	Vadose Zone Soil	LTEERHAAALVRWLRPHVAADARLLVACTQFTTSRDFLLIRHSLTPDADYRELHGAIARLGVVVELPFESTFVVQSDDRTDVATLGKALGELCPDDSLMVVGISHDWAYCESGVSHMNMVVGLSGCQVVRY
Ga0209481_102681572	3300027880	Populus Rhizosphere	VFLPEGRHAAPLVRYLRSQLGADARLLVACSQFTTTRDFLLVRHSLTPGADYSELHDALQRLGTVVALPFESTFVIQSLYANEIRTDVHTLGLALGELCPDESLMVTGISHDWAYSDSGVSRMFIGDAYEEAQFKSF
Ga0307469_118332081	3300031720	Hardwood Forest Soil	RWMRSQIAHDARLLVARNQFSTTRDFLLIRHSLTPGADYRELHDAIERLGTVVELPFESTFVIRSDDATDVKTLGLALGELCPDESLMVTGVSHDWAFCNSGVSRMHVADEGEQRIVLRS
Ga0307469_122402872	3300031720	Hardwood Forest Soil	DGRHSAPLVRYLRAHLTDDARLLVACTHFSTARDFLLVRHSLTPGADYGELHDALDRLGIVVEMPFESTFVVRSDDRSDVKTLGLALGELCPDESLMVVGINHDWAFASSGVSRMFVAGAAEVGTVFREF
Ga0307468_1008543722	3300031740	Hardwood Forest Soil	ARDFLLVRHSLTPGADYSELHEALERLGTVVALPFESTFVIQSLYATEMRTDVNTLGLALGELCPDESLMVTGISHDWAYSDSGVSRMFVGDAFEEAVFKTF
Ga0307468_1008846212	3300031740	Hardwood Forest Soil	EERHAAPLVRWLRSQVDHDARLLVACTQFTTSRDFLLIRHSLTPDADYSELHDAIHRLGVVVDLPFESTFVVQSEDHTDVQTLGLALGELCPDEELMVTGVNHDWAYCDAGVSRMHVAAAADALQFRTF
Ga0307468_1022863591	3300031740	Hardwood Forest Soil	HSAPLVRYIRSHIADEARILVACTQFTTARDFLLVRHSLTPGADYSELHDALRRLGTVVELPFESTFVIRSEDRSDVQTLGLALGELCPDESLMVTGISHDWAYCNSGVSRMHVAADARAQAAFREF
Ga0307413_117919772	3300031824	Rhizosphere	LVACTQFTTSRDFLLVRHSLTPGADYSELHSALDRLGTVVDLPFDSMFVIRSDDRSDVKTLGAALGELCPDDSLMVTGISHDWAFCNSGMSQMFVGAERVEKAGFRAF
Ga0307411_112587511	3300032005	Rhizosphere	LPEGRHAAPLIRFLRSFVASDARLLVGCTQFTPQRDFLLVRHSLTPGADYSELHSALDRLGTVVDLPFDATFVVHSDDQTDLQTLGRGLGELCPDDSIMVTGISHDWAYSNSGVSRMFVATEAVEAEFKTF
Ga0307415_1020755342	3300032126	Rhizosphere	LPEGRHSAPLVRYLRAQLASEARLLVACTQFTSSRDFLLVRHSLTPGADYTELHDALDRLGSVIPLGYESTFVVQSDDTTDVHTLGAALGELCPDESLMVTGISHDWAYCDSGVSRMFVAADLEYPQFKAF
Ga0307415_1023900831	3300032126	Rhizosphere	HAAPLVRYLRPHVSSDARFLVACTQFTTSRDFLLVRHSLTPGANYSELHNAIDRLGTVVDLPFESTFVISSDDRSDVKTLGDALGELCPDDSLMVTGISHDWAFCNSGVSQMFVSAERVEKAGFRAF
Ga0335076_108493092	3300032955	Soil	PLVRWMRSQIAHDARLLVARTQFSTSRDFLLIRHSLTQGADYRELHDAIERLGIVVELPFESTFVVRSDDSTDVQTLGRALGELCPDESLMVTGVSHDWAFCNSGVSRMFVGDEGAQRILLRSF
Ga0334946_093796_2_400	3300034026	Sub-Biocrust Soil	FLPEGRHSAPLVRYLRAQLGADARLLVACTQFTTTRDFLLVRHSLTPGADYSELHDALARLGTVVELPFESTFVIQSDDRTDVRTLGAALGELCPDESLMVTGISHDWAYSNSGVSRMFVADAREEAQFKVF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094355

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences