Basic Information | |
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Family ID | F094436 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 106 |
Average Sequence Length | 90 residues |
Representative Sequence | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Number of Associated Samples | 96 |
Number of Associated Scaffolds | 106 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 85.71 % |
% of genes near scaffold ends (potentially truncated) | 36.79 % |
% of genes from short scaffolds (< 2000 bps) | 87.74 % |
Associated GOLD sequencing projects | 89 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (88.679 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (17.924 % of family members) |
Environment Ontology (ENVO) | Unclassified (46.226 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (61.321 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 10.42% β-sheet: 26.04% Coil/Unstructured: 63.54% | Feature Viewer |
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Pfam ID | Name | % Frequency in 106 Family Scaffolds |
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PF07653 | SH3_2 | 20.75 |
PF01656 | CbiA | 17.92 |
PF13614 | AAA_31 | 14.15 |
PF00018 | SH3_1 | 3.77 |
PF00202 | Aminotran_3 | 1.89 |
PF04087 | DUF389 | 1.89 |
PF13545 | HTH_Crp_2 | 0.94 |
PF06564 | CBP_BcsQ | 0.94 |
PF00106 | adh_short | 0.94 |
PF04185 | Phosphoesterase | 0.94 |
PF14604 | SH3_9 | 0.94 |
COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
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COG1808 | Uncharacterized membrane protein AF0785, contains DUF389 domain | Function unknown [S] | 1.89 |
COG1192 | ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ | Cell cycle control, cell division, chromosome partitioning [D] | 0.94 |
COG3511 | Phospholipase C | Cell wall/membrane/envelope biogenesis [M] | 0.94 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 88.68 % |
Unclassified | root | N/A | 11.32 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2170459010|GIO7OMY01BLDHI | Not Available | 515 | Open in IMG/M |
2189573002|GZIGXIF02GLCH6 | Not Available | 537 | Open in IMG/M |
3300000156|NODE_c0546824 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus | 1235 | Open in IMG/M |
3300000789|JGI1027J11758_12803529 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 1007 | Open in IMG/M |
3300000956|JGI10216J12902_100153767 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1488 | Open in IMG/M |
3300005169|Ga0066810_10159901 | Not Available | 543 | Open in IMG/M |
3300005327|Ga0070658_10822100 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 807 | Open in IMG/M |
3300005329|Ga0070683_101887143 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 574 | Open in IMG/M |
3300005330|Ga0070690_100452080 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 953 | Open in IMG/M |
3300005338|Ga0068868_100341995 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 1280 | Open in IMG/M |
3300005341|Ga0070691_10155360 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1176 | Open in IMG/M |
3300005344|Ga0070661_101563539 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 557 | Open in IMG/M |
3300005345|Ga0070692_10466222 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 812 | Open in IMG/M |
3300005347|Ga0070668_100124414 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 2065 | Open in IMG/M |
3300005347|Ga0070668_102075492 | Not Available | 525 | Open in IMG/M |
3300005354|Ga0070675_100593609 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1004 | Open in IMG/M |
3300005356|Ga0070674_101258348 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 659 | Open in IMG/M |
3300005366|Ga0070659_100060716 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 2986 | Open in IMG/M |
3300005436|Ga0070713_101275730 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 712 | Open in IMG/M |
3300005436|Ga0070713_101422597 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 672 | Open in IMG/M |
3300005437|Ga0070710_10053391 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 2276 | Open in IMG/M |
3300005437|Ga0070710_11020982 | All Organisms → cellular organisms → Bacteria | 603 | Open in IMG/M |
3300005438|Ga0070701_10027243 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 2797 | Open in IMG/M |
3300005439|Ga0070711_101107211 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 682 | Open in IMG/M |
3300005440|Ga0070705_100168214 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 1473 | Open in IMG/M |
3300005457|Ga0070662_100157716 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1773 | Open in IMG/M |
3300005545|Ga0070695_100563585 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 889 | Open in IMG/M |
3300005546|Ga0070696_100019212 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 4626 | Open in IMG/M |
3300005549|Ga0070704_100162717 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1766 | Open in IMG/M |
3300005617|Ga0068859_100267730 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1801 | Open in IMG/M |
3300005764|Ga0066903_101767948 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1180 | Open in IMG/M |
3300005983|Ga0081540_1022410 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 3730 | Open in IMG/M |
3300006058|Ga0075432_10162960 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 863 | Open in IMG/M |
3300006163|Ga0070715_10825674 | All Organisms → cellular organisms → Bacteria | 565 | Open in IMG/M |
3300006173|Ga0070716_101570126 | Not Available | 540 | Open in IMG/M |
3300006175|Ga0070712_100957408 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 740 | Open in IMG/M |
3300006574|Ga0074056_11492157 | Not Available | 506 | Open in IMG/M |
3300006574|Ga0074056_11662741 | All Organisms → cellular organisms → Bacteria | 789 | Open in IMG/M |
3300006575|Ga0074053_11612870 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 814 | Open in IMG/M |
3300006575|Ga0074053_11718448 | All Organisms → cellular organisms → Bacteria | 637 | Open in IMG/M |
3300006579|Ga0074054_12010974 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales | 1076 | Open in IMG/M |
3300006755|Ga0079222_11348300 | Not Available | 655 | Open in IMG/M |
3300006797|Ga0066659_10521688 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 955 | Open in IMG/M |
3300006871|Ga0075434_101091013 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 811 | Open in IMG/M |
3300006871|Ga0075434_101983112 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 587 | Open in IMG/M |
3300006904|Ga0075424_100298259 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1715 | Open in IMG/M |
3300006953|Ga0074063_14018400 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 940 | Open in IMG/M |
3300006953|Ga0074063_14297187 | All Organisms → cellular organisms → Bacteria | 548 | Open in IMG/M |
3300006954|Ga0079219_10513421 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 844 | Open in IMG/M |
3300009092|Ga0105250_10051256 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia gipuzkoensis | 1656 | Open in IMG/M |
3300009094|Ga0111539_10082435 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 3783 | Open in IMG/M |
3300009098|Ga0105245_11371810 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 757 | Open in IMG/M |
3300009156|Ga0111538_10541216 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1476 | Open in IMG/M |
3300009162|Ga0075423_10131108 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 2631 | Open in IMG/M |
3300009162|Ga0075423_10459537 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis | 1338 | Open in IMG/M |
3300009176|Ga0105242_11853857 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 642 | Open in IMG/M |
3300010154|Ga0127503_10006843 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1213 | Open in IMG/M |
3300010154|Ga0127503_10252075 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1513 | Open in IMG/M |
3300010154|Ga0127503_10275713 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 580 | Open in IMG/M |
3300010373|Ga0134128_11596613 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 718 | Open in IMG/M |
3300010375|Ga0105239_12156627 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 648 | Open in IMG/M |
3300010399|Ga0134127_10844950 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 967 | Open in IMG/M |
3300012208|Ga0137376_10467613 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1094 | Open in IMG/M |
3300012951|Ga0164300_10565570 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 664 | Open in IMG/M |
3300012957|Ga0164303_10025463 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 2351 | Open in IMG/M |
3300012958|Ga0164299_10099807 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1506 | Open in IMG/M |
3300012960|Ga0164301_10803298 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 720 | Open in IMG/M |
3300012984|Ga0164309_11373336 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 601 | Open in IMG/M |
3300012986|Ga0164304_10426599 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 949 | Open in IMG/M |
3300013100|Ga0157373_10238556 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1285 | Open in IMG/M |
3300013102|Ga0157371_10162824 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1593 | Open in IMG/M |
3300013296|Ga0157374_10066315 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3392 | Open in IMG/M |
3300013306|Ga0163162_11008820 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 941 | Open in IMG/M |
3300014325|Ga0163163_10395461 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1440 | Open in IMG/M |
3300014326|Ga0157380_11854576 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 663 | Open in IMG/M |
3300014745|Ga0157377_10072629 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 1992 | Open in IMG/M |
3300014969|Ga0157376_11254974 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 770 | Open in IMG/M |
3300015077|Ga0173483_10839003 | Not Available | 535 | Open in IMG/M |
3300015371|Ga0132258_11364902 | All Organisms → cellular organisms → Bacteria | 1791 | Open in IMG/M |
3300017792|Ga0163161_10030788 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 3821 | Open in IMG/M |
3300020002|Ga0193730_1128483 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 688 | Open in IMG/M |
3300025898|Ga0207692_10117347 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1485 | Open in IMG/M |
3300025904|Ga0207647_10559060 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 634 | Open in IMG/M |
3300025905|Ga0207685_10215062 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 911 | Open in IMG/M |
3300025914|Ga0207671_10962196 | Not Available | 674 | Open in IMG/M |
3300025915|Ga0207693_11222093 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 566 | Open in IMG/M |
3300025927|Ga0207687_10456193 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1061 | Open in IMG/M |
3300025931|Ga0207644_10734438 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 824 | Open in IMG/M |
3300025937|Ga0207669_10648518 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 863 | Open in IMG/M |
3300025938|Ga0207704_10156767 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → Candidatus Accumulibacter phosphatis | 1615 | Open in IMG/M |
3300025939|Ga0207665_11255798 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 591 | Open in IMG/M |
3300025949|Ga0207667_12114911 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 521 | Open in IMG/M |
3300026088|Ga0207641_11685417 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium | 636 | Open in IMG/M |
3300026118|Ga0207675_100306238 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1548 | Open in IMG/M |
3300028708|Ga0307295_10042567 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1159 | Open in IMG/M |
3300028720|Ga0307317_10304295 | Not Available | 539 | Open in IMG/M |
3300031170|Ga0307498_10040421 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1208 | Open in IMG/M |
3300031421|Ga0308194_10033340 | Not Available | 1226 | Open in IMG/M |
3300031740|Ga0307468_100004702 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 4622 | Open in IMG/M |
3300031763|Ga0318537_10303565 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 591 | Open in IMG/M |
3300031820|Ga0307473_10112738 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 1475 | Open in IMG/M |
3300032001|Ga0306922_11912398 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 581 | Open in IMG/M |
3300032009|Ga0318563_10104359 | All Organisms → cellular organisms → Bacteria | 1501 | Open in IMG/M |
3300032205|Ga0307472_102475769 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 527 | Open in IMG/M |
3300033475|Ga0310811_11407582 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 535 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 17.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 12.26% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.55% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.55% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.77% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 2.83% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 2.83% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.83% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.83% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.83% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.83% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.89% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 1.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.89% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.89% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.94% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil | 0.94% |
Grass Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil | 0.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.94% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 0.94% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.94% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.94% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.94% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.94% |
Sugar Cane Bagasse Incubating Bioreactor | Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor | 0.94% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2170459010 | Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!) | Environmental | Open in IMG/M |
2189573002 | Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml) | Environmental | Open in IMG/M |
3300000156 | Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic | Engineered | Open in IMG/M |
3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300005169 | Soil and rhizosphere microbial communities from Laval, Canada - mgHPA | Environmental | Open in IMG/M |
3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Host-Associated | Open in IMG/M |
3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Environmental | Open in IMG/M |
3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Host-Associated | Open in IMG/M |
3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Host-Associated | Open in IMG/M |
3300006058 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Host-Associated | Open in IMG/M |
3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006574 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006575 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006579 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Host-Associated | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Host-Associated | Open in IMG/M |
3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
3300020002 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1 | Environmental | Open in IMG/M |
3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028708 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152 | Environmental | Open in IMG/M |
3300028720 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357 | Environmental | Open in IMG/M |
3300031170 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S | Environmental | Open in IMG/M |
3300031421 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031763 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032009 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300033475 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
F62_05182630 | 2170459010 | Grass Soil | MTKRPNTPGHDLAADLLADLTQPAPIDTASTLESPAANVGSPDLTAPRESGPFRPAVQWLVRISPLDWRKPSLSVARGSTAMHLGPIGIELALLRR |
FE1_06427730 | 2189573002 | Grass Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMHLGPIRVELALLRC |
NODE_05468241 | 3300000156 | Sugar Cane Bagasse Incubating Bioreactor | MTKRPDAPGHDLAAELLADLTQPTPVDTVFMSESDATNVGSADLAAPRESTPFRPAVQWLVRISPLDWRKPSLSVSRNSTAMRLGPI |
JGI1027J11758_128035292 | 3300000789 | Soil | MTTRPDRPGHDLAADLLADLTQPASIDTVFKLESPATDVGLPDPAAXQESXPFSPTVQWVVRXSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
JGI10216J12902_1001537673 | 3300000956 | Soil | MTTRPDRPGHDLAADLLADLTQPASIDTVFKLESPATDVGLPDPAARQESRPFSPTVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0066810_101599012 | 3300005169 | Soil | DLLADLTQPAPIDTVFKLESPATNVGLPDLAAPRESRPSRPAVQWLVRISPLDWRKPSLSVARDLTAMHLGPIRVELAMLRC* |
Ga0070658_108221002 | 3300005327 | Corn Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070683_1018871431 | 3300005329 | Corn Rhizosphere | FKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070690_1004520802 | 3300005330 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKSESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDW |
Ga0068868_1003419951 | 3300005338 | Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPDARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMR |
Ga0070691_101553601 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARPESSPFRPAVQWVVRVSPLDW |
Ga0070661_1015635391 | 3300005344 | Corn Rhizosphere | LTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070692_104662222 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARN |
Ga0070668_1001244141 | 3300005347 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVAR |
Ga0070668_1020754922 | 3300005347 | Switchgrass Rhizosphere | AADLLADLTQPAPIDTVFKPESPATDVGVPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070675_1005936092 | 3300005354 | Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPDARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070674_1012583482 | 3300005356 | Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070659_1000607161 | 3300005366 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070713_1012757302 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFELERPATDVGLPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070713_1014225971 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDW |
Ga0070710_100533913 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070710_110209822 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNST |
Ga0070701_100272434 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKP |
Ga0070711_1011072112 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070705_1001682141 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPDARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070662_1001577162 | 3300005457 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0068853_1004340661 | 3300005539 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSP |
Ga0070695_1005635851 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRL |
Ga0070696_1000192125 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070704_1001627173 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0068859_1002677302 | 3300005617 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTTMRLGPIRVELALLRC* |
Ga0066903_1017679483 | 3300005764 | Tropical Forest Soil | MTKRPNAPSHDLAADLLADLSQPTPVDTVFKPESQATNVGSTDLATLPESSPFRPAVQWLVRISPLDWRKPSLSVARGSTAMHLGPIRVELALLSG* |
Ga0081540_10224104 | 3300005983 | Tabebuia Heterophylla Rhizosphere | MTKRADTPGHDLVADLLADLTQPAPIDPAFKSEHPATEVELSNLAVSRESTPFRPAVQWLVRISPLDWRKPSLSLARDSTAMYLGPIRVELALSRC* |
Ga0075432_101629601 | 3300006058 | Populus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070715_108256742 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070716_1015701261 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | RPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0070712_1009574082 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDGPGHDLAADLLADLTQPAPIDTVFELERPATDVGLPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARSSTAVRLGPIRVELALLRC* |
Ga0074056_114921572 | 3300006574 | Soil | MTKRPSTPGHDLAADLLADLSQPAPIDAVADLDSAAANVGLPDLAAPRESSRFRPAVQWLVRISPLDWRKPSLSVARNSTAMHLGPIGVELALLRY* |
Ga0074056_116627412 | 3300006574 | Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVVKPESPAIDVGLPDPAARPESTPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRVGPIRV* |
Ga0074053_116128702 | 3300006575 | Soil | MTKRPDTPGHVLAADLLADLTQPAPIDAVSDLDSPAANVGLPDLAAPRESSRFRPAVQWLVRISPLDWR |
Ga0074053_117184481 | 3300006575 | Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVVKPESPAIDVGLPDPAARPESTPFRPAVQWVVRVSPLDWRKPSLSVARNST |
Ga0074054_120109742 | 3300006579 | Soil | MTKRPDTPGHVLAADLLADLTQPAPIDTVFKLESPATNVGLPDLAAPRESRPSRPAVQWLVRISPLDWRKPSLSVARDLTAMHLGPIRVELAMLRC* |
Ga0079222_113483002 | 3300006755 | Agricultural Soil | MTRRPDTPGHDLAADLLADLTQPTPADPVFRPASQATDDGSADLATPPESGPCRPAVQWLVRISPLDWRKPSLSVARDSTAMQLGPIRVELALLSC* |
Ga0066659_105216881 | 3300006797 | Soil | MTTRPDRPGHDLAADLLADLTQPAPTDMVFKPETPATDVGLPDPGARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0075434_1010910131 | 3300006871 | Populus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVEFALLRC* |
Ga0075434_1019831122 | 3300006871 | Populus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFELETPATDVGLPDPAARQESSPFRPAVQWVVRVSPLDWRKPSLSV |
Ga0075424_1002982594 | 3300006904 | Populus Rhizosphere | HDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0074063_140184002 | 3300006953 | Soil | MTKRPNTPGHDLAADLLADLTQPAPIDTGSDLDSPAADVGLPDLAAPRESSRFRPAVQWLVRISPLDWRKPSLSVARNSTAMHLGPIGVELALLRY* |
Ga0074063_142971871 | 3300006953 | Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVVKPESPAIDVGLPDPAARPESTPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRVGPIRVELALLRC* |
Ga0079219_105134212 | 3300006954 | Agricultural Soil | MTTRPDRPGHDLAADLLADLTQPGPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0105250_100512562 | 3300009092 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVVRNSTTMRLGPIRVELALLRC* |
Ga0111539_100824354 | 3300009094 | Populus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKLESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0105245_113718101 | 3300009098 | Miscanthus Rhizosphere | TVFELERPATDVGLPDPAARRETSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMGLGPIRVELALLRC* |
Ga0111538_105412163 | 3300009156 | Populus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPGTDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0075423_101311083 | 3300009162 | Populus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPTPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0075423_104595372 | 3300009162 | Populus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRMPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0105242_118538572 | 3300009176 | Miscanthus Rhizosphere | DLTQPAPIDTVFELERPATDVGLPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARSSTAVRLGPIRVELALLRC* |
Ga0127503_100068431 | 3300010154 | Soil | MTKRPNTPGHDLAADLLADLTQPAPIDTVKLESPAANVGLPDLAAPRESSRFRPAVQWLVRISPLDWRKPSLSVSLDSTAMHLGPIGVELALLRC* |
Ga0127503_102520752 | 3300010154 | Soil | MTKRSATPGHDLATDLLADLTQPAPVDAVVNLESPATEVRSPDLADPRESRRFCPAVQWLVRISPLDWRNPSLSVALDSTAVQLGPVRVELALLRY* |
Ga0127503_102757131 | 3300010154 | Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVVKPETRATDVGLPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRL |
Ga0134128_115966132 | 3300010373 | Terrestrial Soil | NGLPGGASGMTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0105239_121566272 | 3300010375 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMGLGPIRVELALLRC* |
Ga0134127_108449501 | 3300010399 | Terrestrial Soil | INGLPGGASGMTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0137376_104676132 | 3300012208 | Vadose Zone Soil | MTKRPNTAGHDLAADLLADLTQPAPIDTVSELDSAAANVGLPDLPAPRESSRFRPAVQWLVRISPLDWRKPSLSVARNSTAMHLGPIGVELALLRY* |
Ga0164300_105655701 | 3300012951 | Soil | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGLIRIELALLRC* |
Ga0164303_100254631 | 3300012957 | Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFSPTVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0164299_100998074 | 3300012958 | Soil | MTTRPARPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0164301_108032981 | 3300012960 | Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESGPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0164309_113733361 | 3300012984 | Soil | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGP |
Ga0164304_104265991 | 3300012986 | Soil | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKLESPAADVGVPDPAARRESSPFRPAVQWVVRVSPLD |
Ga0157373_102385562 | 3300013100 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRTPSLSVARNSIAMRLGPIRVELALLRC* |
Ga0157371_101628243 | 3300013102 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0157374_100663155 | 3300013296 | Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTTMRLGPIRVELALLRC* |
Ga0163162_110088202 | 3300013306 | Switchgrass Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0163163_103954611 | 3300014325 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLIADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0157380_118545761 | 3300014326 | Switchgrass Rhizosphere | HDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0157377_100726293 | 3300014745 | Miscanthus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRTPSLSVARNSIAMRLGPIRVELALLRC* |
Ga0157376_112549741 | 3300014969 | Miscanthus Rhizosphere | DLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0173483_108390032 | 3300015077 | Soil | MTTRPDRPGHDLAADLLADLTQPAAIDTVFKLESPATDVGLPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC* |
Ga0132258_113649022 | 3300015371 | Arabidopsis Rhizosphere | MTRRPDTPGHDLAADLLADLTQPTPADPVFRPASQATDDGSADLATPPESGPCRPAVQWLVRISPLDWRKPSLSVARDSTAMQLGPIRVEVALLSC* |
Ga0163161_100307884 | 3300017792 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0193730_11284831 | 3300020002 | Soil | MTKRPSTPGHDLAADLLADLTQPAPIDTVSDLDSPAANVGLPDLAAPRESSRFRPAVQWLVRISPLDWRKPSLSVARNSTAMHLGPIGVELAL |
Ga0207692_101173471 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGLPDPAARREASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLG |
Ga0207647_105590602 | 3300025904 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSL |
Ga0207685_102150621 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGLPEAAARPEASPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0207671_109621961 | 3300025914 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPDARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0207693_112220931 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | PIDTVVKPETPATDVGLPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARSSTAVRLGPIRVELALLRC |
Ga0207687_104561932 | 3300025927 | Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARPESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0207644_107344381 | 3300025931 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFELERPATDVGLPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTA |
Ga0207669_106485182 | 3300025937 | Miscanthus Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFELERPATDVGLPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0207704_101567673 | 3300025938 | Miscanthus Rhizosphere | MTTRPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0207665_112557982 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | DLAADLLADLTQPAPIDTVFKSESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTTMRLGPIRVELALLRC |
Ga0207667_121149111 | 3300025949 | Corn Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRL |
Ga0207641_116854172 | 3300026088 | Switchgrass Rhizosphere | RPDRPAHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTTMRLGPIRVELALLRC |
Ga0207675_1003062383 | 3300026118 | Switchgrass Rhizosphere | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0307295_100425672 | 3300028708 | Soil | MTKRPNTPGHDLAADLLADLTQPAPIDTVKLESPAANVGLPDLAAPRESSRFRPAVQWLVRISPLDWRKPSLSVSLDSTAMHLGPIGVELALLRY |
Ga0307317_103042952 | 3300028720 | Soil | MTKRPSTPGHDLAADLLADLTQPAPIDTVKLESPAANVGLPDLAAPRESSRFRPAVQWLVRISPLDWRKPSLSVSLDSTAMHLGPIGVELALLRY |
Ga0307498_100404212 | 3300031170 | Soil | MTKRSDTPGHDLATDLLADLTQPAPVDAVVNLESPATDVGSPDLADPRESSRFRPAVQWLVRISPLDWRKPSLSVARNSAAMHLGPIGVELALLRY |
Ga0308194_100333402 | 3300031421 | Soil | MTKRPSTPGHDLAADLLADLTQPAPIDAVSDLDSPAANVGLPDLAAPRESSRFRPAVQWLVRISPLDWRKPSLSVSLDSTAMHLGPIGVELALLRY |
Ga0307468_1000047021 | 3300031740 | Hardwood Forest Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKLESPATDVGVPDPDARPESSPFRPAVQWVVRVSPLDWRKPSLSVARSSTAVRLGPIRVELALLRC |
Ga0318537_103035651 | 3300031763 | Soil | MTKRPDTPGHDLAVDLLADLNQPTPVDTVVKHESQATEDGSPDLITRPESRPFRPAVQWLVRISPLEWRRPSLSVARDST |
Ga0307473_101127383 | 3300031820 | Hardwood Forest Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVFKPESPATDVGVPDPAARRESSPFRPAVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
Ga0306922_119123982 | 3300032001 | Soil | MTKRPDTPGHDLAVDLLADLTQPTPVDTVVKHESQATEDGSPDLITRPESRPFRPAVQWLVRISPLEWRRPSLSVARDSTAVQVGPVRVELALLSC |
Ga0318563_101043592 | 3300032009 | Soil | MTKRPDTPGHDLAVDLLADLNQPTPVDTVVKHESQATEDGSPDLITRPESRPFRPAVQWLVRISPLEWRRPSLSVARDSTAVQVGPVRVELALLSC |
Ga0307472_1024757692 | 3300032205 | Hardwood Forest Soil | MTTRPDRPGHDLAADLLADLTQPAPIDTVFELERPATDVGLPDPAARRESSPFRPAIQWVVHVSPLDWRKPSLSVARSSTAVRLG |
Ga0310811_114075821 | 3300033475 | Soil | MTTRPDRPGHDLAADLLADLTQPASIDTVFKLESPATDVGLPDPAARQESRPFSPTVQWVVRVSPLDWRKPSLSVARNSTAMRLGPIRVELALLRC |
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