Metagenome Family F094442

Basic Information
Family ID	F094442
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	86 residues
Representative Sequence	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS
Number of Associated Samples	78
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	14.71 %
% of genes near scaffold ends (potentially truncated)	37.74 %
% of genes from short scaffolds (< 2000 bps)	87.74 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (66.981 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.094 % of family members)
Environment Ontology (ENVO)	Unclassified (22.642 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.547 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.76% β-sheet: 31.76% Coil/Unstructured: 56.47%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07883	Cupin_2	14.15
PF07369	DUF1488	9.43
PF06803	DUF1232	8.49
PF07077	DUF1345	3.77
PF00118	Cpn60_TCP1	1.89
PF00903	Glyoxalase	1.89
PF12244	DUF3606	1.89
PF03330	DPBB_1	0.94
PF07835	COX4_pro_2	0.94
PF07690	MFS_1	0.94
PF16694	Cytochrome_P460	0.94
PF13833	EF-hand_8	0.94
PF14023	DUF4239	0.94
PF08592	Anthrone_oxy	0.94
PF00166	Cpn10	0.94
PF06844	DUF1244	0.94
PF07786	HGSNAT_cat	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	8.49
COG4291	Uncharacterized membrane protein	Function unknown [S]	3.77
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.89
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG3492	Uncharacterized conserved protein, DUF1244 family	Function unknown [S]	0.94
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
All Organisms	root	All Organisms	33.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
cellular organisms	root	All Organisms → cellular organisms	33.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.13 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.42 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.75 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.09 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	10.38 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.89 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.94 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	10.38 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1.89 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01DHBW5	Not Available	577	Open in IMG/M
3300000550\|F24TB_11226215	Not Available	831	Open in IMG/M
3300000787\|JGI11643J11755_11781640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1374	Open in IMG/M
3300000890\|JGI11643J12802_10589472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2614	Open in IMG/M
3300000956\|JGI10216J12902_109176917	Not Available	1284	Open in IMG/M
3300001991\|JGI24743J22301_10076824	Not Available	701	Open in IMG/M
3300004114\|Ga0062593_100233718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1501	Open in IMG/M
3300004114\|Ga0062593_100687715	Not Available	995	Open in IMG/M
3300004480\|Ga0062592_100847948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	816	Open in IMG/M
3300004643\|Ga0062591_101175641	Not Available	745	Open in IMG/M
3300005328\|Ga0070676_11051553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300005330\|Ga0070690_100438401	Not Available	966	Open in IMG/M
3300005331\|Ga0070670_100629308	Not Available	961	Open in IMG/M
3300005332\|Ga0066388_100993605	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300005332\|Ga0066388_101053142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1370	Open in IMG/M
3300005332\|Ga0066388_104647236	Not Available	699	Open in IMG/M
3300005332\|Ga0066388_104844022	Not Available	684	Open in IMG/M
3300005332\|Ga0066388_107696235	Not Available	540	Open in IMG/M
3300005335\|Ga0070666_10163497	Not Available	1556	Open in IMG/M
3300005435\|Ga0070714_100271101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1574	Open in IMG/M
3300005466\|Ga0070685_11198027	Not Available	577	Open in IMG/M
3300005536\|Ga0070697_101297126	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	649	Open in IMG/M
3300005578\|Ga0068854_101659305	Not Available	584	Open in IMG/M
3300005615\|Ga0070702_100054858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2295	Open in IMG/M
3300005764\|Ga0066903_100595300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1914	Open in IMG/M
3300005764\|Ga0066903_101275523	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300005764\|Ga0066903_104332825	Not Available	758	Open in IMG/M
3300005764\|Ga0066903_104432618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	749	Open in IMG/M
3300005764\|Ga0066903_107392093	Not Available	567	Open in IMG/M
3300005764\|Ga0066903_109005489	Not Available	505	Open in IMG/M
3300006175\|Ga0070712_100048177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2953	Open in IMG/M
3300006755\|Ga0079222_11604971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	617	Open in IMG/M
3300006806\|Ga0079220_11787089	Not Available	541	Open in IMG/M
3300006847\|Ga0075431_100621536	Not Available	1063	Open in IMG/M
3300006847\|Ga0075431_102199493	Not Available	506	Open in IMG/M
3300006880\|Ga0075429_100396208	Not Available	1209	Open in IMG/M
3300006969\|Ga0075419_10960310	Not Available	620	Open in IMG/M
3300009093\|Ga0105240_11555470	Not Available	693	Open in IMG/M
3300009147\|Ga0114129_10138500	All Organisms → cellular organisms → Bacteria → Proteobacteria	3338	Open in IMG/M
3300009147\|Ga0114129_12073834	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009148\|Ga0105243_13002333	Not Available	512	Open in IMG/M
3300009156\|Ga0111538_12349111	Not Available	669	Open in IMG/M
3300009162\|Ga0075423_13165306	Not Available	504	Open in IMG/M
3300009174\|Ga0105241_10336759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1306	Open in IMG/M
3300010359\|Ga0126376_11051258	Not Available	818	Open in IMG/M
3300010360\|Ga0126372_10829988	Not Available	919	Open in IMG/M
3300010360\|Ga0126372_12864262	Not Available	534	Open in IMG/M
3300010371\|Ga0134125_10059442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4249	Open in IMG/M
3300010376\|Ga0126381_101533320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	963	Open in IMG/M
3300010396\|Ga0134126_12725165	Not Available	536	Open in IMG/M
3300012910\|Ga0157308_10144923	Not Available	752	Open in IMG/M
3300012971\|Ga0126369_10142894	Not Available	2239	Open in IMG/M
3300012971\|Ga0126369_10232867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1800	Open in IMG/M
3300012971\|Ga0126369_12157564	Not Available	644	Open in IMG/M
3300013297\|Ga0157378_10128338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2344	Open in IMG/M
3300014325\|Ga0163163_11182852	All Organisms → cellular organisms → Bacteria → Proteobacteria	827	Open in IMG/M
3300014745\|Ga0157377_11492212	Not Available	537	Open in IMG/M
3300015077\|Ga0173483_10344874	Not Available	745	Open in IMG/M
3300015077\|Ga0173483_10581026	Not Available	613	Open in IMG/M
3300015372\|Ga0132256_102138195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	665	Open in IMG/M
3300016319\|Ga0182033_10126997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1930	Open in IMG/M
3300016341\|Ga0182035_10298177	Not Available	1321	Open in IMG/M
3300016341\|Ga0182035_10556472	Not Available	986	Open in IMG/M
3300016357\|Ga0182032_10135255	Not Available	1801	Open in IMG/M
3300016357\|Ga0182032_10354218	Not Available	1175	Open in IMG/M
3300016371\|Ga0182034_10564128	Not Available	957	Open in IMG/M
3300016371\|Ga0182034_11639798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	565	Open in IMG/M
3300016404\|Ga0182037_10262380	Not Available	1372	Open in IMG/M
3300016445\|Ga0182038_11883928	Not Available	540	Open in IMG/M
3300017961\|Ga0187778_10124479	Not Available	1614	Open in IMG/M
3300017999\|Ga0187767_10035283	Not Available	1172	Open in IMG/M
3300018028\|Ga0184608_10470825	Not Available	539	Open in IMG/M
3300018060\|Ga0187765_10168597	Not Available	1247	Open in IMG/M
3300020150\|Ga0187768_1065946	Not Available	812	Open in IMG/M
3300021560\|Ga0126371_10087564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3072	Open in IMG/M
3300021560\|Ga0126371_10685522	Not Available	1173	Open in IMG/M
3300021560\|Ga0126371_11497241	Not Available	803	Open in IMG/M
3300021560\|Ga0126371_13407764	Not Available	537	Open in IMG/M
3300025929\|Ga0207664_11119434	Not Available	704	Open in IMG/M
3300025938\|Ga0207704_10834629	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	771	Open in IMG/M
3300025944\|Ga0207661_10554765	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300026088\|Ga0207641_10832563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300027039\|Ga0207855_1045468	Not Available	593	Open in IMG/M
3300027680\|Ga0207826_1091315	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300031573\|Ga0310915_10570922	Not Available	802	Open in IMG/M
3300031716\|Ga0310813_10305257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1344	Open in IMG/M
3300031736\|Ga0318501_10578559	Not Available	616	Open in IMG/M
3300031879\|Ga0306919_10138082	Not Available	1765	Open in IMG/M
3300031890\|Ga0306925_10521367	Not Available	1263	Open in IMG/M
3300031890\|Ga0306925_10568288	Not Available	1201	Open in IMG/M
3300031942\|Ga0310916_10288017	Not Available	1389	Open in IMG/M
3300031942\|Ga0310916_11071150	Not Available	671	Open in IMG/M
3300031947\|Ga0310909_11563022	Not Available	524	Open in IMG/M
3300031954\|Ga0306926_12525504	Not Available	563	Open in IMG/M
3300032001\|Ga0306922_10990794	Not Available	868	Open in IMG/M
3300032001\|Ga0306922_11793971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300032211\|Ga0310896_10279093	Not Available	856	Open in IMG/M
3300032261\|Ga0306920_100291188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2433	Open in IMG/M
3300032892\|Ga0335081_12190509	Not Available	582	Open in IMG/M
3300033289\|Ga0310914_11795903	Not Available	517	Open in IMG/M
3300033412\|Ga0310810_10376169	Not Available	1480	Open in IMG/M
3300033412\|Ga0310810_10710263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	932	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.30%
Host-Associated	Host-Associated	20.75%
Engineered	Engineered	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.36%
Plants	Host-Associated → Plants	20.75%
Aquatic	Environmental → Aquatic	0.94%
Solid Waste	Engineered → Solid Waste	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.77%
Sediment	Environmental → Aquatic → Sediment	0.94%
Roots	Host-Associated → Plants → Roots	0.94%
Grass	Engineered → Solid Waste → Grass	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.06%
Loam	Environmental → Terrestrial → Soil → Loam	23.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Composting	Engineered → Solid Waste → Grass → Composting	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.66%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094442

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_04271330	2170459015	Switchgrass, Maize And Mischanthus Litter	LTQKTEGRVVRLLSKHLAAEDRAVEQWFLVAIDDDEKAKETISKTAKGVNEVVEVIGNIPASRLADWGLTDGEVRLVLPGEPLTESQ
F24TB_112262152	3300000550	Soil	VVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDHLVEIVGTIPATSLASLGLTEGEVRLVLPGEPINS*
JGI11643J11755_117816402	3300000787	Soil	MQQKTEGRVVRLLSKHLAAEDXAVEQWFLVAIDDDEKAKETISNTAKGVNEVVEVIGNIPASRLANWGLTDGEVRLVLPGEPLTESQ*
JGI11643J12802_105894726	3300000890	Soil	KTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDNLVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS*
JGI10216J12902_1091769173	3300000956	Soil	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLGLTEGEVRLVLPGEPINS*
JGI24743J22301_100768241	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPXIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0062593_1002337182	3300004114	Soil	MQQKTEGRVVRLLSKHLAAEDRAVEQWFLVAIDDDEKAKETISKTAKGVNEIVEVIGNIPASRLADWGLTDGEVRLVLPGEPLTESQ*
Ga0062593_1006877152	3300004114	Soil	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDNLVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0062592_1008479481	3300004480	Soil	MQQKTEGRVVRLLSKHLAAEDRAVEQWFLVAIDDDEKAKETISKTAKGVNEIVEVIGNIPASRLADWGLTDGDVRLVLPGEPVTESQ*
Ga0062591_1011756412	3300004643	Soil	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0070676_110515532	3300005328	Miscanthus Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLGLTEGEVRLVLPGEPI
Ga0070690_1004384012	3300005330	Switchgrass Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEFVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0070670_1006293082	3300005331	Switchgrass Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0066388_1009936053	3300005332	Tropical Forest Soil	EEAGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPATRLASLGLTEGEVRLVLPGEPIKADEEQFAGEH*
Ga0066388_1010531421	3300005332	Tropical Forest Soil	MQQKTDGRVVRLLSKRRAAEEAGIEQWFLVAIGDDAKAKEAISNAAHGTDDVVEVIGTIPATRLASLGLTGGEVRLVLPGEPINSQSPP*
Ga0066388_1046472362	3300005332	Tropical Forest Soil	MQQKTDGRVVRLLSKRRAAEEAGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPATRLASLGLTEGEVRLVL
Ga0066388_1048440221	3300005332	Tropical Forest Soil	LLSKHVAAEDRAVEQWFVVAIGDDEKAKETISKTAKGGNEIVEVIGNIPASRLADWGLTDGEVRLVLPGEPLTETTP*
Ga0066388_1076962351	3300005332	Tropical Forest Soil	MEPTNRLRSLLDHAAKTDGRVVRLLSKHRAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATRLASLGLTEGEVRLVLPGE
Ga0070666_101634972	3300005335	Switchgrass Rhizosphere	VVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0070714_1002711012	3300005435	Agricultural Soil	VIRLLSKHLAAEDRVVEQWFLVAIGDDENAREMISRTAKSGNEIVEVIGNIPASRLASWGLTDGDIRVVLPGEPITETQ*
Ga0070714_1012929081	3300005435	Agricultural Soil	RLPLPVLEPQPCMCDIAWMQLKTDGRVVRLLTKHIAAEDQSIEQWFLVAIADDEKAKDAVAKTAKGADEVIEVIGNIPARSLASWGLTDGEVRLVLPGEPINSTA*
Ga0070685_111980271	3300005466	Switchgrass Rhizosphere	LKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0070697_1012971261	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IMQLKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0068854_1016593051	3300005578	Corn Rhizosphere	RLLSKRRAAEEAGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0070702_1000548585	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDYLVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0066903_1005953002	3300005764	Tropical Forest Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEAISRTTTGGNEVVEVIGNIPASRLASWGLTDGDVRVVLPGEPIIESQ*
Ga0066903_1012755233	3300005764	Tropical Forest Soil	MQQKTDGRVVRLLSKRRAAEEAGIEQWFLVAIGDDAKAKEAISNAAHGTDDVVEVIGTIPATRLASLGLTEGEVRLVLPGEPINSQSPP*
Ga0066903_1043328252	3300005764	Tropical Forest Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEMISRTAKAGNEIVEVIGNIPASRLASWGLTDG
Ga0066903_1044326181	3300005764	Tropical Forest Soil	MQQKTDGRVVRLLSKRRAAEESGIEQWFLVAIGDDAKAKEALSSAAHGTDDVVEVVGTIPATRLASLGLTEGEVRLVLPGEPIQADEEQFAGEH*
Ga0066903_1073920932	3300005764	Tropical Forest Soil	MEPTNRQCSLLDKQQKTDGRVVRLLSKHRAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGADDLVEVVGTIPATRLASLGLTEGEVRLVLPGEPISG*
Ga0066903_1090054892	3300005764	Tropical Forest Soil	MQQKTDGRVVRLLSKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDVAEVVGTIPATRLASLGLTEGEVRLVLPGEP
Ga0070715_106136762	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRGTRLPLRVLEPQPCVCDIVWMQLKTDGRVVRLLTKHIAAEDQSIEQWFLVAIADDEKAKDAVAKTAKGADEVIEVIGNIPARSLASWGLTDGEVRLVLPGEPINSTA*
Ga0070712_1000481775	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQLKTDGRVVRLLTKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0079222_116049711	3300006755	Agricultural Soil	MQQKTDGRVIRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEAISRTTTGGNEVVEVIGNIPASRLASWGLTDGDVRVVLPGEPIIESQ*
Ga0079220_117870891	3300006806	Agricultural Soil	MQLKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDNLVEVVGTIPATSLASLGLTEGEVRLVRPGEPINS
Ga0075431_1006215361	3300006847	Populus Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0075431_1021994931	3300006847	Populus Rhizosphere	MQLKTDGRVVRLLSKRHSAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLGLTEGEV
Ga0075429_1003962081	3300006880	Populus Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEG
Ga0075419_109603102	3300006969	Populus Rhizosphere	LSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS*
Ga0105240_115554702	3300009093	Corn Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0114129_101385002	3300009147	Populus Rhizosphere	MQLKTDGRVVRLLTKRRAAEGPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLDLTEGEVRLVLPGEPINS*
Ga0114129_120738342	3300009147	Populus Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTVPATSLASLGLTEGEVRLALRGEPIYS*
Ga0105243_130023332	3300009148	Miscanthus Rhizosphere	VMNYEGVVMQQKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPSTRLASLGLIEGEVRLVLPGEPINS*
Ga0111538_123491111	3300009156	Populus Rhizosphere	MQLKTDGRVVRLLSKRHSAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0075423_131653061	3300009162	Populus Rhizosphere	MQLKTDGRVVRLLTKRRAAEEPGIKQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLGLTEGEVRLVLPGEPINS
Ga0105241_103367591	3300009174	Corn Rhizosphere	KRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPSTRLASLGLIEGEVRLVLPGEPINS*
Ga0126376_110512582	3300010359	Tropical Forest Soil	MQQTTDGRVIRLLSKHLAAEDRVVEQWFLVAIGDDEKAREMISRTAKSGNEIVEVIGNIPASRLASWGLTDGDIRVVLPGEPITETQ*
Ga0126372_108299881	3300010360	Tropical Forest Soil	MQQKTDGRVIRLLGKHLAAEDRVVEQWFLVAIGDDEKAREMISRTAKSGNEIVEVIGNIPASRLASWGLTDGDIRVVLPGEPITETQ*
Ga0126372_128642621	3300010360	Tropical Forest Soil	MQQKTDGRVVRLLSKHVAAEDRAVEQWFVVAIGDDEKAKETISKTAKGGNEIVEVIGNIPASRLADWGLTDGEVRLVLPGEPLTETTP*
Ga0134125_100594422	3300010371	Terrestrial Soil	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0126381_1015333201	3300010376	Tropical Forest Soil	MQQKTDGRVVRLLSKHLAAEDRVVEQWFLVAIGDDEKAKEAISRTTTGGNEVVEVIGNIPASRLASWGLTDGDVRVVLPGEPIIESQ*
Ga0134126_124937461	3300010396	Terrestrial Soil	RSTRLRASELCGTRLPLPVLEPQPCMCDIAWMQLKTDGRVVRLLTKHIAAEDQSIEQWFLVAIADDEKAKDAVAKTAKGADEVIEVIGNIPARSLASWGLTDGEVRLVLPGEPINSTA*
Ga0134126_127251651	3300010396	Terrestrial Soil	RNGPDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLGLTEGEVRLVLPGEPINS*
Ga0157308_101449231	3300012910	Soil	MQLKTDGRVVRLLSKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTVPATSLASLGLTEGEVRLVLP
Ga0126369_101428946	3300012971	Tropical Forest Soil	TRMQQKTDGRVIRLLSKHLAAEDRVVEQWFLVAIGDDEKAREMSSRTAKSGNEIVEVIGNIPASRLASWGLTDGDIRVVLPGEPITETQ*
Ga0126369_102328673	3300012971	Tropical Forest Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEAISRTTTGGNEVVEVIGNIPASRLASWGLTDGDVRVVLPGEPI
Ga0126369_121575641	3300012971	Tropical Forest Soil	MQQKTDGRVVRLLSKRRAAEESGIEQWFLVAIGDDAKAKEALSSAAHGTDDVVEVVGTIPATRLASLGLTEVEVRLVLPGEPIRADEEQFAGEH*
Ga0157378_101283385	3300013297	Miscanthus Rhizosphere	MQQKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDNVVEVVGTIPSTRLASLGLIEGEVRLVLPGEPINS*
Ga0163163_111828522	3300014325	Switchgrass Rhizosphere	VVRLLTKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLDLTEGEVRLVLPGE
Ga0157377_114922121	3300014745	Miscanthus Rhizosphere	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDHLVEIVGTIPATSLASLGLTEGEVRLVLPGEP
Ga0173483_103448741	3300015077	Soil	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPSTRLASLGLIEGEVRLVLPGEPINS*
Ga0173483_105810262	3300015077	Soil	MQLKTDGRVVRLLTKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEIVGTIPATSLASLDLTEGEVRLVLPGEPINS*
Ga0132256_1021381952	3300015372	Arabidopsis Rhizosphere	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDERAKETISKTAKGGNDIVEVIGNIPASRLANWGLTDGEVRLVLPGEPLTESQ*
Ga0182033_101269971	3300016319	Soil	VRLLSKRRAAEDPGIEQWFLVAIGDDAKAKEAISSAAQGTDEVVEVVGIIPATRLAGLGLTEGEVRLVLPGEPINTDETNRA
Ga0182035_102981771	3300016341	Soil	VRLLSKRRAAEEVGIEQWFLVAIGDDAKAKEAISSAAQGTDEVVEVVGIIPATRLAGLGLTEGEVRLVLPGEPINTDETNRA
Ga0182035_105564722	3300016341	Soil	PGASMEAGFLPCHTARMQPKTDGRVVRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKSAKGGNEVVEVIGTILATRLASLGLTDGEIRLVLPGEPITES
Ga0182032_101352553	3300016357	Soil	MEAGFLPCHTARMQPKTDGRVVRLWTKHLAAEDRAVEQWFLVAIGDDEKAKERSRKAAKGGNGVVEVIGTIPATRLASWGLTDGEIRLVLPGEPITES
Ga0182032_103542181	3300016357	Soil	LSKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAQGTDEVVEVVGIIPATRLAGLGLTEGEVRLVLPGEPINTDETNRA
Ga0182034_105641282	3300016371	Soil	VVRLLTKHLAAEDCAVEQWFLVAIGDDEKAKERISKSAKGGNGVVEVIGTIPATRLASWGLTDGEIRLVLPGEPITES
Ga0182034_116397981	3300016371	Soil	MQQKTDGRVVRLLSKRRPAEEAGIEQWFLVAIGDDAKAKEAISNAAHGTDDVLEVIGTIPATSLASLGLTEGEVRLVLPGEPINS
Ga0182037_102623802	3300016404	Soil	MEAGFLPCHTARMQPKTDGRVVRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKSAKGGNEVVEVIGTIPATRLASWGLTDGEIRLVLPVEPITES
Ga0182038_118839282	3300016445	Soil	SMEAGFLPCHTARMQPKTDGRVVRLWTKHLAAEDRAVEQWFLAAIGDDEKAKERISKSAKGGNEVVEVIGTILATRLASLGLTDGEIRLVLPGEPITES
Ga0187778_101244791	3300017961	Tropical Peatland	LPCHTARMQPKTDGRLVRLLTKHLAAEDRAVEQWFLVAVGDDEKAKERISKTAKGGNEVVEVIGNIPATRLASWGLRDGEVRLVLPGEPITESQ
Ga0187767_100352833	3300017999	Tropical Peatland	MADLVRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKTAKGGNEVVEVIGNIPATRLASWGLRDGEVRLVLPGEPITESQ
Ga0184608_104708251	3300018028	Groundwater Sediment	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATSLASLGLTEGEVRLVLPGEPINS
Ga0187765_101685972	3300018060	Tropical Peatland	LPCHTARMQPKTDGRLVRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKTAKGGNEVVEVIGNIPATRLASWGLRDGEVRLVLPGEPITESQ
Ga0187768_10659463	3300020150	Tropical Peatland	SSDIKQDRYGAMHKTTLRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKTAKGGNEVVEVIGNIPATRLASWGLRDGEVRLVLPGEPITESQ
Ga0126371_100875644	3300021560	Tropical Forest Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEAISRTTTGGNEVVEVIGNIPASRLASWGLTDGDVRVVLPGEPIIESQ
Ga0126371_106855221	3300021560	Tropical Forest Soil	MQQKTDGRVIRLLSKHLAAEDRVVEQWFLVAIGDDEKAREMISRTAKSGNEIVEVIGNIPASRLASWGLTDGDIRVVLPGEPITETQ
Ga0126371_114972412	3300021560	Tropical Forest Soil	MLQKTDGRVVRLLSKSRAAEEAGIEQWFLVAIGDDAKAKEALSSAAHGTDDVVEVVGTIPATRLASLGLTEGEVRLVLPGEPINSQSPP
Ga0126371_134077641	3300021560	Tropical Forest Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEMICRTAKAGNEIVEVIGNIPASRLASWGLTDGDVRVVLPGEPIIESQ
Ga0207663_116461481	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TRLRASELCGTRLPLPVLEPQPCMCDIAWMQLKTDGRVVRLLTKHIAAEDQSIEQWFLVAIADDEKAKDAVAKTAKGADEVIEVIGNIPARSLASWGLTDGEVRLVLPGEPINSTA
Ga0207664_111194342	3300025929	Agricultural Soil	TDGRVIRLLSKHLAAEDRVVEQWFLVAIGDDENAREMISRTAKSGNEIVEVIGNIPASRLASWGLTDGDIRVVLPGEPITETQ
Ga0207704_108346292	3300025938	Miscanthus Rhizosphere	LKTDGRVVRLLSKRHAAEEPCIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS
Ga0207661_105547652	3300025944	Corn Rhizosphere	HAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPGEPINS
Ga0207641_108325632	3300026088	Switchgrass Rhizosphere	MQQKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDVVEVVGTIPSTRLASLGLIEGEVRLVLPGEPINS
Ga0207855_10454682	3300027039	Tropical Forest Soil	MQPKTDGRVVRLLTKHLAAEDRAVEQWFLVAVGDDEKAKETISKTAKGGNEVVEVIGTIPATRLASWGLTDGEVRLVLPGEPITESQ
Ga0207826_10913152	3300027680	Tropical Forest Soil	MQPKTDGRVVRLLTKHLAAEDRAVEQWFLVAVGDDEKAKETISKTAKGGNEVVEVIGNIPATRLASWGLTDGEVRLVLPGEPITESQYP
Ga0310915_105709221	3300031573	Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDKKAKEMISRTARGGNDIVEVIGNIPATRLADWGLTDGEVRLVLPGEPLTETTP
Ga0310813_103052573	3300031716	Soil	MQQKTEGRVVRLLSKHLAAEDPAVEQWFLVAIDDDEKAKETISKTAKGVNEVVEVIGNIPASRLADWGLTDGEVRLVLPGEPLTESQ
Ga0318501_105785592	3300031736	Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEMISRTARGGNDIVEVIGNIPATRLADWGLTDGEVRLVLPGEPLTETTP
Ga0306919_101380822	3300031879	Soil	MQQKTDGRVVRLLSKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAQGTDEVVEVVGIIPATRLAGLGLTEGEVRLVLPGEPINTDETNRA
Ga0306925_105213673	3300031890	Soil	VRLLSKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAQGTDEVVEVVGIIPATRLAGLGLTEGEVRLVLPGEPINTDETNRA
Ga0306925_105682881	3300031890	Soil	MAAGFLPCHTARMQPKTDGRVVRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKSAKGGNEVVEVIGTIPATRLATWGLTDGEIRLVLPVEPITES
Ga0310916_102880171	3300031942	Soil	SKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAQGTDEVVEVVGIIPATRLAGLGLTEGEVRLVLPGEPINTDETNRA
Ga0310916_110711501	3300031942	Soil	MQQKTDGRVVRLLSKRRAAEEAGIEQWFLVAIGDDAKAKEAISNAAHGTDDVLEVIGTIPATRLASLGLTEGKVRLVLPGEPINS
Ga0310909_115630222	3300031947	Soil	AGFLPCHTARMQPKTDGRVVRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKSAKGGNEVVEVIGTIPATRLASWGLTDGEIRLVLPGEPITES
Ga0306926_125255041	3300031954	Soil	LSKRRAAEEAGIEQWFLVAIGDDAKAKEAISNAAHGTDDVLEVIGTIPATRLASLGLTEGKVRLVLPGEPI
Ga0306922_109907941	3300032001	Soil	ASMEAGFLPCHTARMQPKTDGRVVRLLTKHLAAEDRAVEQWFLVAIGDDEKAKERISKSAKGGNEVVEVIGTILATRLASLGLTDGEIRLVLPGEPITES
Ga0306922_117939711	3300032001	Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDKKAKEMISRTARGGNDIVEVIGNIPATRLADWGLTDGEVRLV
Ga0310896_102790933	3300032211	Soil	MQLKTDGRVVRLLSKRHAAEEPGIEQWFLVAIGDDAKAKEAISSAAHGTDDLVEVVGTIPATNLASLGLTEGEVRLVLPG
Ga0306920_1002911881	3300032261	Soil	MQQKTDGRVVRLLSKHLAAEDRAVEQWFLVAIGDDEKAKEMISRTARGGNDIVEVIGNIPATRLADWGLTDGEVRLV
Ga0335081_121905091	3300032892	Soil	MQQKTDGRVVRLLTKHNAAEDSTIEQWFLVAIGDDAKAKEAVSSATHGSDAVIELIGTIPAKSLADWGLTDGEVRLVLPGEPIS
Ga0310914_117959031	3300033289	Soil	KTDGRVVRLLSKRRAAEEPGIEQWFLVAIGDDAKAKEAISSAAQGTDEVVEVVGIIPATRLAGLGLTEGEVRLVLPGEPINTDETNRA
Ga0310810_103761692	3300033412	Soil	MQQKTEGRVVRLLSKHLAAEDPAVEQWFLVAIDDDEKAKETISKTAKDGNEIVEVIGNIPASRLASWGLRDGDVRLVLPGEPVTESQ
Ga0310810_107102631	3300033412	Soil	MQQKTEGRVVRLLSKHLAAEDRAVEQWFLVAIDDDEKAKETISKTAKGVNEVVEVIGNIPASRLADWGLTDGEVRLVLPGEPLTESQ

Hidden Markov Model


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