Metagenome / Metatranscriptome Family F094454

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094454
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	176 residues
Representative Sequence	MTHLYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR
Number of Associated Samples	94
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.83 %
% of genes near scaffold ends (potentially truncated)	48.11 %
% of genes from short scaffolds (< 2000 bps)	83.96 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.264 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.811 % of family members)
Environment Ontology (ENVO)	Unclassified (45.283 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.415 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.25% β-sheet: 20.44% Coil/Unstructured: 45.30%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF06026	Rib_5-P_isom_A	15.09
PF00440	TetR_N	9.43
PF02142	MGS	4.72
PF16925	TetR_C_13	1.89
PF00005	ABC_tran	0.94
PF02653	BPD_transp_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	15.09

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
All Organisms	root	All Organisms	37.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
cellular organisms	root	All Organisms → cellular organisms	37.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.32 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.72 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	12.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.55 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.77 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	12.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.66 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	12.26 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	2.83 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.89 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.94 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	12.26 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	2.83 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	1.89 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.94 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	12.26 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	2.83 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1.89 %
Microcoleaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae	0.94 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	12.26 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	2.83 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1.89 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	0.94 %
Microcoleus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	12.26 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	2.83 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1.89 %
unclassified Microcoleus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus	0.94 %
Clostridium sp. C105KSO13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. C105KSO13	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.26 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	12.26 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.77 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	2.83 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1.89 %
Microcoleus sp. SIO2G3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus → Microcoleus sp. SIO2G3	0.94 %
Clostridium sp. C105KSO13	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. C105KSO13	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E02IEM5C	Not Available	530	Open in IMG/M
3300001661\|JGI12053J15887_10263966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	851	Open in IMG/M
3300002245\|JGIcombinedJ26739_100024798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5224	Open in IMG/M
3300002245\|JGIcombinedJ26739_100903089	Not Available	766	Open in IMG/M
3300003219\|JGI26341J46601_10003570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	5143	Open in IMG/M
3300003219\|JGI26341J46601_10010691	All Organisms → cellular organisms → Bacteria	3007	Open in IMG/M
3300003368\|JGI26340J50214_10013284	All Organisms → cellular organisms → Bacteria	2589	Open in IMG/M
3300003505\|JGIcombinedJ51221_10117862	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1063	Open in IMG/M
3300004467\|Ga0068978_1225446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	1218	Open in IMG/M
3300004471\|Ga0068965_1308919	Not Available	829	Open in IMG/M
3300004474\|Ga0068968_1404913	Not Available	874	Open in IMG/M
3300004475\|Ga0068969_1044886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300004593\|Ga0068946_1227716	Not Available	768	Open in IMG/M
3300004594\|Ga0068976_1002874	Not Available	850	Open in IMG/M
3300004611\|Ga0068925_1363539	Not Available	739	Open in IMG/M
3300004977\|Ga0072329_1376999	Not Available	623	Open in IMG/M
3300005332\|Ga0066388_101761266	Not Available	1099	Open in IMG/M
3300005434\|Ga0070709_10751071	Not Available	762	Open in IMG/M
3300005602\|Ga0070762_10888109	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_100509910	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	2043	Open in IMG/M
3300006028\|Ga0070717_11339958	Not Available	650	Open in IMG/M
3300006059\|Ga0075017_100540475	Not Available	887	Open in IMG/M
3300006086\|Ga0075019_11025069	Not Available	533	Open in IMG/M
3300006163\|Ga0070715_10417913	Not Available	749	Open in IMG/M
3300006176\|Ga0070765_100049342	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	3424	Open in IMG/M
3300006893\|Ga0073928_10058542	All Organisms → cellular organisms → Bacteria → Proteobacteria	3421	Open in IMG/M
3300006893\|Ga0073928_10083479	All Organisms → cellular organisms → Bacteria → Proteobacteria	2730	Open in IMG/M
3300009089\|Ga0099828_11323774	Not Available	637	Open in IMG/M
3300009525\|Ga0116220_10304394	Not Available	702	Open in IMG/M
3300010339\|Ga0074046_10025627	All Organisms → cellular organisms → Bacteria → Proteobacteria	4068	Open in IMG/M
3300010341\|Ga0074045_10240550	Not Available	1200	Open in IMG/M
3300010343\|Ga0074044_10113129	Not Available	1823	Open in IMG/M
3300010376\|Ga0126381_100247216	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	2414	Open in IMG/M
3300010379\|Ga0136449_100231646	All Organisms → cellular organisms → Bacteria → Proteobacteria	3458	Open in IMG/M
3300010854\|Ga0126360_1101471	Not Available	1048	Open in IMG/M
3300010856\|Ga0126358_1050490	Not Available	607	Open in IMG/M
3300010856\|Ga0126358_1082343	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1875	Open in IMG/M
3300010858\|Ga0126345_1297196	Not Available	876	Open in IMG/M
3300010860\|Ga0126351_1016229	Not Available	1111	Open in IMG/M
3300010861\|Ga0126349_1115048	Not Available	763	Open in IMG/M
3300010861\|Ga0126349_1136461	Not Available	835	Open in IMG/M
3300011043\|Ga0138528_135016	Not Available	844	Open in IMG/M
3300011047\|Ga0138553_145268	Not Available	788	Open in IMG/M
3300011060\|Ga0138583_1020986	Not Available	780	Open in IMG/M
3300011067\|Ga0138594_1039901	Not Available	562	Open in IMG/M
3300011068\|Ga0138599_1125134	Not Available	533	Open in IMG/M
3300011075\|Ga0138555_1099557	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1619	Open in IMG/M
3300011079\|Ga0138569_1188492	Not Available	679	Open in IMG/M
3300011081\|Ga0138575_1147327	Not Available	874	Open in IMG/M
3300011088\|Ga0138576_1189299	Not Available	583	Open in IMG/M
3300011305\|Ga0138532_1091996	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1650	Open in IMG/M
3300012203\|Ga0137399_10158883	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1812	Open in IMG/M
3300012205\|Ga0137362_11223361	Not Available	636	Open in IMG/M
3300012362\|Ga0137361_10073427	All Organisms → cellular organisms → Bacteria	2905	Open in IMG/M
3300012988\|Ga0164306_11882218	Not Available	520	Open in IMG/M
3300016357\|Ga0182032_11161997	Not Available	663	Open in IMG/M
3300020579\|Ga0210407_10105553	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	2144	Open in IMG/M
3300020580\|Ga0210403_10279001	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1370	Open in IMG/M
3300020583\|Ga0210401_10014046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7766	Open in IMG/M
3300021046\|Ga0215015_11054213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. C105KSO13	879	Open in IMG/M
3300021361\|Ga0213872_10246587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300021405\|Ga0210387_11032198	Not Available	719	Open in IMG/M
3300021406\|Ga0210386_11211708	Not Available	638	Open in IMG/M
3300021420\|Ga0210394_10270468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	1488	Open in IMG/M
3300021444\|Ga0213878_10126336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	1051	Open in IMG/M
3300021474\|Ga0210390_11081339	Not Available	652	Open in IMG/M
3300021479\|Ga0210410_10518823	Not Available	1063	Open in IMG/M
3300021560\|Ga0126371_10244215	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1907	Open in IMG/M
3300022533\|Ga0242662_10012922	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1748	Open in IMG/M
3300022533\|Ga0242662_10050767	Not Available	1071	Open in IMG/M
3300022557\|Ga0212123_10128577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1998	Open in IMG/M
3300022557\|Ga0212123_10150344	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1797	Open in IMG/M
3300022712\|Ga0242653_1002188	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300022712\|Ga0242653_1011907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	1097	Open in IMG/M
3300022712\|Ga0242653_1027181	Not Available	837	Open in IMG/M
3300022712\|Ga0242653_1109505	Not Available	513	Open in IMG/M
3300026551\|Ga0209648_10479315	Not Available	742	Open in IMG/M
3300026824\|Ga0207723_114123	Not Available	618	Open in IMG/M
3300026898\|Ga0207788_1022146	Not Available	561	Open in IMG/M
3300026920\|Ga0208575_1020843	Not Available	591	Open in IMG/M
3300027330\|Ga0207777_1084097	Not Available	552	Open in IMG/M
3300027616\|Ga0209106_1088303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	695	Open in IMG/M
3300027633\|Ga0208988_1079847	Not Available	821	Open in IMG/M
3300027680\|Ga0207826_1000502	All Organisms → cellular organisms → Bacteria	11044	Open in IMG/M
3300027698\|Ga0209446_1005179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3212	Open in IMG/M
3300027738\|Ga0208989_10206144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → unclassified Microcoleus → Microcoleus sp. SIO2G3	649	Open in IMG/M
3300027783\|Ga0209448_10238983	Not Available	600	Open in IMG/M
3300027812\|Ga0209656_10082929	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300027812\|Ga0209656_10223073	Not Available	903	Open in IMG/M
3300027825\|Ga0209039_10010651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	5354	Open in IMG/M
3300027889\|Ga0209380_10319663	Not Available	911	Open in IMG/M
3300027898\|Ga0209067_10911194	Not Available	517	Open in IMG/M
3300027911\|Ga0209698_11058878	Not Available	603	Open in IMG/M
3300028047\|Ga0209526_10307787	Not Available	1071	Open in IMG/M
3300028906\|Ga0308309_11156951	Not Available	668	Open in IMG/M
3300029636\|Ga0222749_10260003	Not Available	886	Open in IMG/M
3300030849\|Ga0075393_10252073	Not Available	553	Open in IMG/M
3300030923\|Ga0138296_1124053	Not Available	839	Open in IMG/M
3300030939\|Ga0138303_1285400	Not Available	750	Open in IMG/M
3300030998\|Ga0073996_10251193	Not Available	792	Open in IMG/M
3300031022\|Ga0138301_1177654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	871	Open in IMG/M
3300031590\|Ga0307483_1006003	Not Available	967	Open in IMG/M
3300031590\|Ga0307483_1033596	Not Available	547	Open in IMG/M
3300031954\|Ga0306926_12038882	Not Available	644	Open in IMG/M
3300032160\|Ga0311301_12525069	Not Available	574	Open in IMG/M
3300033289\|Ga0310914_11788540	Not Available	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.96%
Aquatic	Environmental → Aquatic	15.09%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.96%
Freshwater	Environmental → Aquatic → Freshwater	7.55%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.77%
Sediment	Environmental → Aquatic → Sediment	3.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.38%
Loam	Environmental → Terrestrial → Soil → Loam	20.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.55%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.55%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	19.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.55%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	6.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004467	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 75 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004471	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004474	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004593	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004594	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004611	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004977	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 67 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010854	Boreal forest soil eukaryotic communities from Alaska, USA - W4-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011043	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 6 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011047	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011067	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011068	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 67 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011075	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011079	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011081	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011088	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011305	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026824	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030849	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030939	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_05302100	2189573000	Grass Soil	TMIPMHSKIGLAFAVVLLALPGVSTAKETDTRYRGLQSTADTDWEFKQLLNGYLRAWSPGCRKFDLESAAQFYETTDRFAGHHFLAPIEGPVGWERYGSEMAKIMSDFAEYTILPSEEDFRFKRDGLHVSTAISYRVVGRNREGKTLDTRARVFLVWERVNNRWLISREDVTALLN
JGI12053J15887_102639662	3300001661	Forest Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLVNQYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGMQVSTAISFRVVGRNRDGKMLDFRARASLVWDRVGDRWLIRRENVSAVL
JGIcombinedJ26739_1000247986	3300002245	Forest Soil	MYSVLRVASAIFFLALAGASPAAQTDNQYRGLQITADTAWEFKQLLNEYLRAWSPGCRKFDMESVAQFYETTDRFSGYHFLAPIEGPVGWPRYGSEMAKIMSDFAQYTILPNEDDFLFQRDGLHVSTAISYRVVGRNHEGKMLDTRARAILVWERVNNRWLISREDVTALLNASNVAR*
JGIcombinedJ26739_1009030892	3300002245	Forest Soil	MYSRLKVALATILVALVGISCASEIDHQTTSLQQIADSDWEFKQLVNEYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGKRVSTAISFRVVGRNRDGKMLDSRARA
JGI26341J46601_100035701	3300003219	Bog Forest Soil	FLPSSWLPRFRDMSSNLENRFRNMAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETSDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLXVSTAISYRIVGRSREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
JGI26341J46601_100106913	3300003219	Bog Forest Soil	MTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR*
JGI26340J50214_100132844	3300003368	Bog Forest Soil	MAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR*
JGIcombinedJ51221_101178622	3300003505	Forest Soil	MRRYQQIVPLLSWFLPSSWLPRFRDMSSNLENRFRNMRHLYSTLRVASALFFVGLAGASSATEVDNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKR
Ga0068978_12254462	3300004467	Peatlands Soil	MTHIYSTLRVASAFFFLGLAGVSPATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0068965_13089191	3300004471	Peatlands Soil	MTHLYSTLRVAAALFFLGLAGASSATEADNQYRGLQTTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0068968_14049131	3300004474	Peatlands Soil	MTHLYSTLRVAAALFFLGLAGASSATEADNQYRGLQVTADTDWEFKQLLNDYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDMRARVILVWERVNDHWLINREDVTALLNASNVAR*
Ga0068969_10448862	3300004475	Peatlands Soil	MRRNGQIIPLLSWFLPSSWLPRFPDMSSNPENRFRNMTHIYSTLRVASAFFFLGLAGVSPATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0068946_12277161	3300004593	Peatlands Soil	MSSNLENRLRNMTYLYSTLRVASALFFLGLAGASSATEADNQYRGLQVTADTDWEFKQLLNDYLRAWSPGCRKFDMEGAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQFTILPNEDDFLFKRDGSHVSTAISYRVVGRNRERKILDTRARVILVWERINDRWLISREDVTALLNASNVAR*
Ga0068976_10028741	3300004594	Peatlands Soil	MTHIYSTLRVASAFFFLGLAGVSPATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0068925_13635391	3300004611	Peatlands Soil	ALFFLGLAGASSATEADNQYRGLQVTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNRERKILDTRARVILVWERINDRWLISREDVTALLNASNVAR*
Ga0072329_13769991	3300004977	Peatlands Soil	LLSWFLPSSWLPRFRDMSSNPENRFRNMTHLYLTLRVASALFFLGLAGASSATEADNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVA
Ga0066388_1017612662	3300005332	Tropical Forest Soil	VHSNLKVASAVFFLALSGVVSAAEAANQELRLQTAADTDWEFRQLVNNYLRAWSPGCRKFDIELATQFYEKTDRFSGYHFLAPLEGPVGWERYGSEMAKVMSDFDQFTILPNEDDFRFSRDGTHVSTAISYRVVGRNRDGKTLDTRARVLLVWERVKDRWLISREEVTSPLSGSTAAR*
Ga0070709_107510712	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKPIRSILKLVSAISLLALADTGLTKETDYQYRGLQITAETDWEFKQLVNEYLRAWSPGCRKFNMENAAQFYETTDRFSGSHFLAPVENPAGWQTYGAEMARIMFNFNEYTILPNEDDFLFKRDGSHVSTAISYRAVGKSREGKTLDARARV
Ga0070762_108881091	3300005602	Soil	NMRHLYSTLRVASALFFVGLAGASSATEVDNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNAANVAR*
Ga0066903_1005099102	3300005764	Tropical Forest Soil	VHSNLKVASAVFFLALSGVVSAAEAANQELRLQTAADTDWEFRQLVNNYLRAWSPGCRKFDIELATQFYEKTDRFSGYHFLAPLEGPVGWERYGSEMAKVMSDFDQFTILPNEDDFRFSRDGTRVSTAISYRVVGRNRDGKTLDTRARVLLVWERVKDRWLISREEVTSPLSGSTAAR*
Ga0070717_113399581	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRRYQQIVPLLSWFLPSSWLPRFRDMSSNLENRFRNMRHLYLALRVASALFFVGLAGASSATEVDNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVW
Ga0075017_1005404752	3300006059	Watersheds	MTHLYSTLRVASTLFFLGLAGASSATEADNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWE
Ga0075019_110250691	3300006086	Watersheds	GQNRQIIPLLSRFLPSSWLPRFRDMSSNLENRFRNMAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETSDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRIVGRSRE
Ga0070715_104179132	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKPIRSILKLVSAISLLALADTGLTKETDYQYRGLQITAETDWEFKQLVNEYLRAWSPGCRKFNMENAAQFYETTDRFSGSHFLAPVENPAGWQTYGAEMARIMSNFNEYTILPNEDDFLFKRDGSHVSTAISYRAVGKSREGKTLDARARVLLVWERVNDRWLISREDVTALLNASNVS
Ga0070765_1000493422	3300006176	Soil	MRHLYSTLRVASALFFVGLAGASSATEVDNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNAANVAR*
Ga0073928_100585423	3300006893	Iron-Sulfur Acid Spring	MTHLYSTLRVASALFFLGLTGASSATGVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERIHDRWLISREDVTALLNASNVAR*
Ga0073928_100834792	3300006893	Iron-Sulfur Acid Spring	MTSMYSVLRVASAIFFLALAGASPATQTDNQYQGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESVAQFYETTDRFSGYHFLAPIEGPVCWPRYGSEMAKIMSDFAQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNHEGKMLDTRARAILVWERVNDRWLISREDVTALLNASNVAR*
Ga0099828_113237741	3300009089	Vadose Zone Soil	ADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLAPIEGPVGWRRYGPEMAKIMSDFDQYTILPNEDDFLFKRDGLRVSTAISYRVVGRNREGKTLDARARVILVWERVNDRWLISREDVTALLNASNVAR*
Ga0116220_103043941	3300009525	Peatlands Soil	MTHLYSTLRVAAALFFLGLAGASSATEADNQYRGLQVTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSNVSTAISYRVVGRNRQGKMLDTRARVILVWERINDRWLISRED
Ga0074046_100256274	3300010339	Bog Forest Soil	MGQNRQIISLLSWFLPSSWLPRFRDMSSNLENRFRNMAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETSDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRIVGRSREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0074045_102405502	3300010341	Bog Forest Soil	MAHIYSTLRVASALFFLGLAGASSATEADNQYRGLQITADTDWEFKQLFNEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRIVGRSREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0074044_101131291	3300010343	Bog Forest Soil	VASAFFFLGLASASSATEVDNQYRGLQTTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0126381_1002472163	3300010376	Tropical Forest Soil	MHSILKIAFAVFFIAVAGVCSAAEIGNQELRLQVAADNDWEFRQLVNEYLRAWSPGCRKFDMALATQFYETTDRFSGYHFLAPIDGPVGWGRYGSEMAKVMSDFDQYTILPNEDDFRLTRDGTHVSTGISYRVVGRNRDRKTLDTRARVLLVWERVNDRWLICREEVTSLMSRSTAAR*
Ga0136449_1002316464	3300010379	Peatlands Soil	VASAFFFLGLAGVSPATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0126360_11014711	3300010854	Boreal Forest Soil	MYSLLRVASVIFLLGLGVPGLAGDTDYRYPGLQRTAETDWDFKQLVNEYLRAWSPGCRRFDMEGAAVFYETTERFSGNHFLAPSEGPVGWTAYGSEMRKIMSDFSEYTILPNEDDFLFRRDGLHVSTLISYRAVGRNREGKSLDTRARVLLVWERVNDR
Ga0126358_10504901	3300010856	Boreal Forest Soil	MTHLYSTLRVASALLFLGLAGASSATEADNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTAAEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVTLVWERVHDRWLISREDVTALLNSSNVAR*
Ga0126358_10823433	3300010856	Boreal Forest Soil	MYSLLRVASVIFLLGLGVPGLAGDTDYRYPGLQRTAETDWDFKQLVNEYLRAWSPGCRRFDMEGAAVFYETTERFSGNHFLAPSEGPVGWTAYGSEMRKIMSDFSEYTILPNEDDFLFRRDGLHVSTLISYRAVGRNREGKSLDTRARVLLVWERVNDRWVISREDVTALLNASNVSR*
Ga0126345_12971962	3300010858	Boreal Forest Soil	MTHLYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLNSRENVTALLKATNVAKKENIKEESAGKTTGVKTEKRKKYK*
Ga0126351_10162292	3300010860	Boreal Forest Soil	MTHLYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR*
Ga0126349_11150482	3300010861	Boreal Forest Soil	VVSVILFFGLAGARSATKADDQHRGLQVTAETDWEFKQLVNEYLRAWSPGCRKFDMESAAQFYETTDQFSGYHFLAPMEAPAGWQRYGAVMAKIMSDFNEFTILPDEDDFLFKRNGSQVSTAISYRAVGKNREGKALDTRARVLLVWERVNDRWLISHEDVAALPGASSVARN*
Ga0126349_11364612	3300010861	Boreal Forest Soil	MTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR*
Ga0138528_1350161	3300011043	Peatlands Soil	VASAFFFLGLAGVSPATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR*
Ga0138553_1452682	3300011047	Peatlands Soil	MTYLYSTLRVASALFFLGLAGASSATEADNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQFTILSNEDDFLFKRDGLHVSTAISYRVVGRNRERKILDTRARVILVWERINDRWLISREDVTALLNASNV
Ga0138583_10209861	3300011060	Peatlands Soil	VASAFFFLGLAGVSPATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNSSNVAR*
Ga0138594_10399011	3300011067	Peatlands Soil	VASAFFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNA
Ga0138599_11251341	3300011068	Peatlands Soil	ATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNRQGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR*
Ga0138555_10995573	3300011075	Peatlands Soil	MTHLYSTLRVAAALFFLGLAGASSATEADNQYRGLQVTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMANVMSQFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0138569_11884921	3300011079	Peatlands Soil	MTHLYSTLRVASALFFLGLAGASSATEADYQYRGLQVTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR*
Ga0138575_11473271	3300011081	Peatlands Soil	MTHLYSTLRVAAALFFLGLAGASSATEADNQYRGLQVTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDMRARVILVWERVNDHWLINREDVTALLNASNVAR*
Ga0138576_11892991	3300011088	Peatlands Soil	NQYRGLQFTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNVSNVGR*
Ga0138532_10919961	3300011305	Peatlands Soil	MTYLYSTLRVASALFFLGLAGASSATEADNQYRGLQVTADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNRERKILDTRARVILVWERVNDRWLINREDVTALLNASNVAR*
Ga0137399_101588833	3300012203	Vadose Zone Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLVNEYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGMQVSTAISFRVVGRNRDGKMLDFRARASLVWDRVGDRWLIRRENVSAVLNGTAAAR*
Ga0137362_112233612	3300012205	Vadose Zone Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLINEYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGKRVSTAISFRVVGRNRDGKMLDSRARASLTWDRI
Ga0137361_100734273	3300012362	Vadose Zone Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLVNQYLRAWSPGSRKFDMDSAAKFYETTDGFSGHHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGMQVSTAISFRVVGRNRDGKMLDFRARASLVWDRVGDRWLIRRENVSAVLNGTAVAR*
Ga0164306_118822181	3300012988	Soil	MKPIRSILKLVSAISLLALADTGLTKETDYQYRGLQITAETDWEFKQLVNEYLRAWSPGCRKFNMENAAQFYETTDRFSGSHFLAPVENPAGWQTYGAEMARIMSNFNEYTILPNEDDFLFKRDGSHVSTAISYRAVGKSREGKTLDARARVLLVWERV
Ga0182032_111619972	3300016357	Soil	AGSATEVDNLYRGLQMTANTDWEFKRLLNEYLRAWSPGCRKFNISGAAQFYETTDRFSGCHFLAPIAGPVGWRRYGSEMEKIMSDFDQYSILPNEDDFGFKRDGSHVSTAISYRAVGRSREGKMLDTRARVLLVWERVNDRWLISREDVTALNASSVAR
Ga0210407_101055532	3300020579	Soil	MTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFLGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVA
Ga0210403_102790013	3300020580	Soil	MTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVA
Ga0210401_100140469	3300020583	Soil	MSSNPENRFRNMTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVAR
Ga0215015_110542132	3300021046	Soil	MTSMYPILRVVSTVFFLALAGAGSATQADNQYRGLQITAETDWEFKQLVNEYLRAWSPGCRKFDMESAAQFYETTDRFSGRHFLAPVEGPVGWQRYGPEMAKIMSDFDQYTILPNEDDFLFKRDGLHVSTAISYRAVGRNREGKMLDARARVILVWERVNDRWLISREDVTALLNASNVA
Ga0213872_102465872	3300021361	Rhizosphere	LQTAADTDWEFRHLVNDYLRAWSPGCRKFDIELATQFYEKTGRFSGYHFLAPLESPVGWERYGSEMAKVISDFDQYTILPNEDDFRFSRDGTHVSTAISYRVVGRNRDGKTLDTRARVLLVWERVNDRWLISHEEVRSILSGSTAAR
Ga0210387_110321981	3300021405	Soil	EADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVAR
Ga0210386_112117081	3300021406	Soil	SWFLPSSWLPRFRAMSSNPENRFRNMTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVAR
Ga0210394_102704683	3300021420	Soil	MRRYQQIVPLLSWFLPSSWLPRFRAMSSNPENRFRNMTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVAR
Ga0213878_101263362	3300021444	Bulk Soil	VHSILKVASAVLFLALSGTVSAAEVANQELRLQTAADTDLEFRHLVNDYLRAWSPGCRKFDIELATQFYEKTGRFSGYHFLAPLESPVGWERYGSEMAKVISDFDQYTILPNEDDFRFSRDGTHVSTAISYRVVGRNRDGKTLDTRARVLLVWERVNDRWLISHEEVRSILSGSTAAR
Ga0210390_110813391	3300021474	Soil	SALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVAR
Ga0210410_105188231	3300021479	Soil	MTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRW
Ga0126371_102442152	3300021560	Tropical Forest Soil	LQVAADNDWEFRQLVNEYLRAWSPGCRKFDMALATQFYETTDRFSGYHFLAPIDGPVGWGRYGSEMAKVMSDFDQYTILPNEDDFRLTRDGTHVSTGISYRVVGRNRDRKTLDTRARILLVWERVNDRWLICREKVTSLMSRSTAAR
Ga0242662_100129223	3300022533	Soil	MKPIRSILKLVSAISLLALADTGLTKETDYQYRGLQITAETDWEFKQLVNEYLRAWSPGCRKFNMENAAQFYETTDRFSGSHFLAPVENPAGWQTYGAEMARIMSNFNEYTILPNEDDFLFKRDGSHVSTAISYRAVGKSREGKTLDARARVLLVWERVNDRWLISREDVIALLNASNVS
Ga0242662_100507673	3300022533	Soil	MTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFLGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVA
Ga0212123_101285771	3300022557	Iron-Sulfur Acid Spring	MTSMYSVLRVASAIFFLALAGASPATQTDNQYQGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESVAQFYETTDRFSGYHFLAPIEGPVCWPRYGSEMAKIMSDFAQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNHEGKMLDTRARAILVWERVNDRWLISREDVTALLNASNVA
Ga0212123_101503442	3300022557	Iron-Sulfur Acid Spring	MTHLYSTLRVASALFFLGLTGASSATGVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERIHDRWLISREDVTALLNASNVA
Ga0242653_10021882	3300022712	Soil	MTSMYSVLRVASAIFFLALAGASPATQTDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESVAQFYETTDRFSGYHFLAPIEGPVGWPRYGSEMAKIMSDFAQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNHEGKMLDTRARAILVWERVNDRWLISREDVTALLNASSVA
Ga0242653_10119073	3300022712	Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLVNEYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGFVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFRRDGMQVSTAISFRVVGRNRDGKMLDFRARASLVWDRVGDRWLIRRENVSAVLDGTAAAR
Ga0242653_10271812	3300022712	Soil	MKPIRSILKLVSAISLLAFADTGLTKETDYQYRGLQITAETDWEFKQLVNEYLRAWSPGCRKFNMENAAQFYETTDRFSGSHFLAPVENPAGWQTYGAEMARIMSNFNEYTILPNEDDFLFKRDGSHVSTAISYRAVGKSREGKTLDARARVLLVWERVNDRWLISREDVTALLNASNVS
Ga0242653_11095051	3300022712	Soil	QYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTPLLNAANVAR
Ga0209648_104793151	3300026551	Grasslands Soil	MTSMYSVLRVASAIFFLALAGASPATQTDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLAPIEGPVGWRRYGPEMAKIMSDFDQYTILPNEDDFLFKRDGLRVSTAISYRVVGRNREGKTLDARARVILVWERVNDRWLISREDVTALLNASNVA
Ga0207723_1141231	3300026824	Tropical Forest Soil	PRFRDMSSNLENQPTMTSMYSALRVASVISFLALAGASAATQTDSRYRGLQITAATDWEFKQLLSEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAPIEGPVGWQRYGSEMAKIMSDFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLISREDVTALLNASNVAR
Ga0207788_10221461	3300026898	Tropical Forest Soil	SQYRGLQITAATDWEFKQLLSEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAPIEGPVGWQRYGSEMAKIMSDFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLISREDVTALLNASNVAR
Ga0208575_10208431	3300026920	Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLVNEYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGMQVSTAISFRVVGRNRDGKMLDFRARASL
Ga0207777_10840971	3300027330	Tropical Forest Soil	YPKNAICGIPDNKRRNGQIIPLLSWFLRSSWLPRFRDMSSNLENQPTMTSMYSALRVASVISFLALAGASAATQTDSQYRGLQITAATDWEFKQLLSEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAPIEGPVGWQRYGSEMAKIMSDFDQYTILPNEDDFLFKRDGSHVSTAISYRVV
Ga0209106_10883031	3300027616	Forest Soil	MYSRLKVALATILVALAGISCASEIDHQPTSLQQIADSDWEFKQLVNQYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGMQVSTAISFRVVGRNRDGKMLDFRARASLVWDRVGDRWLIRRENVSAVLDGTAAAR
Ga0208988_10798471	3300027633	Forest Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLVNQYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGMQVSTAISFRVVGRNRDGKMLDFRARASLVWDRVGDRW
Ga0207826_10005026	3300027680	Tropical Forest Soil	MTSMYSALRVASVISFLALAGASAATQTDSQYRGLQITAATDWEFKQLLSEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAPIEGPVGWQRYGSEMAKIMSDFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERVNDRWLISREDVTALLNASNVA
Ga0209446_10051794	3300027698	Bog Forest Soil	MGQNRQIIPLLSWFLPSSWLPRFRDMSSNLENRFRNMAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRIVGRSR
Ga0208989_102061442	3300027738	Forest Soil	MYSRLKVALATILVALAGISCASEIDHQTTSLQQIADSDWEFKQLVNEYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWGRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGMQVSTAISFRVVGRNRDGKMLDFRARASLVWDRVGDRWLISRENVSAV
Ga0209448_102389831	3300027783	Bog Forest Soil	RLLSYPKSAICGIPESMRRNGQITPLLSRFQPSSWLPRFRDMSSDPENRFRNMTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLNVSTAISYRVVGRNREGKMLD
Ga0209656_100829292	3300027812	Bog Forest Soil	MAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETSDRFSGHHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRIVGRSREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVA
Ga0209656_102230732	3300027812	Bog Forest Soil	MTHLYSTLRVASALFFLGLAGASSATEADNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGPEMAKVMSQFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVA
Ga0209039_100106516	3300027825	Bog Forest Soil	MAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAAREGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRIVGRSREGKMLDTRARVILVWERVNDRWLINREDVTALLNASNVA
Ga0209380_103196631	3300027889	Soil	RYQQIVPLLSWFLPSSWLPRFRDMSSNLENGFRNMRHLYSTLRVASALFFVGLAGASSATEVDNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNAANVAR
Ga0209067_109111941	3300027898	Watersheds	GQNRQIIPLLSRFLPSSWLPRFRDMSSNLENRFRNMAHIYSTLRVASALFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAASEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRIV
Ga0209698_110588781	3300027911	Watersheds	IYSTLRVASVLFFLGLAGASSATEVDNQYRGLQITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETSDRFSGYHFLAASEGPVGWQRYGSEMAKIMSDFDQYTILPNEDDFLFKRDGSHVSTAISYRVVGRNREGKMLDARARVILVWERINDRWLISREDVTALLNASNVAR
Ga0209526_103077871	3300028047	Forest Soil	MTSMYSVLRVASAIFFLALAGASPAAQTDNQYRGLQITADTAWEFKQLLNEYLRAWSPGCRKFDMESVAQFYETTDRFSGYHFLAPIEGPVGWPRYGSEMAKIMSDFAQYTILPNEDDFLFQRDGLHVSTAISYRVVGRNHEGKMLDTRARAILVWERVNNRWLISREDVTALLNASNVA
Ga0308309_111569512	3300028906	Soil	MRHLYSTLRVASALFFVGLAGASSATEVDNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGSHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLD
Ga0222749_102600031	3300029636	Soil	MTSMYSVLRVASAIFFLALAGASPATQTDNQYRGLQITADTDWQFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVA
Ga0075393_102520731	3300030849	Soil	APDWNSRPVHSILKIAFAVFFIAIAGVCSGAEIGNQEPRLQVAADSDWEFRHLVNEYLQAWSPGCRKFDMALATQFYETTDRFSGYHFLAPIDGPVGWGRYGSEMAKVMSDFDQYTILPNEDDFRLTRDGTHVSTGISYRVVGRNRDRKPLDTRARVLLVWERVNDRWLICREEVTSLMSRSTA
Ga0138296_11240532	3300030923	Soil	VILFFGLAGARSATNVDDQHRGLQVTAETDWEFKQLVNEYLRAWSPGCRKFDMESAAQFYETTDQFSGYHFLAPTEAPTGWQRYGAAMQKIMSGFNEFTILPDEDDFLFKRNGSQVSTAISYRAIGKNHEGKMLDTRARVLLVWERVNDRWLISREDVAALPGVSN
Ga0138303_12854001	3300030939	Soil	VILFFGLAGARSATNVDDQHRGLQVTAETDWEFKQLVNEYLRAWSPGCRKFDMESAAQFYETTDQFSGYHFLAPMEEPAGWQRYGSAMAKIMSDFNEFTILPDEDDFLFKRNGSQVSTAISYRAVGKNREGKALDTRARVLLIWKRVNDRWLISREDVTALLGVSNVARN
Ga0073996_102511931	3300030998	Soil	MYSRLKVALATILVSLVGISCASEIDHQTTSLQQIADSDWEFKQLVNEYLRAWSPGSRKFDMDSAAKFYETTDGFSGYHYLAPIEGSVGWVRYRSEMEKIMSDFNQFTILPNEDDFRFKRDGKRVSTAISFRVVGRNRDGKMLDSRARALLIWDRVGDRWLISRENVSAILNGTAAAR
Ga0138301_11776542	3300031022	Soil	AFAVFFIAVAGVCSGAEIGNQEPRLQVAADNDWEFRHLVNEYLQAWSPGCRKFDMALATQFYETTDRFSGYHFLASIDGPVGWGRYGSEMAKVMSDFDQYTILPNEDDFRLTRDGTHVSTGISYRVVGRNRDRKPLDTRARVLLVWERVNDRWLICREEVTSLMSRSTAAR
Ga0307483_10060032	3300031590	Hardwood Forest Soil	MHSILKIAFAVFFIAVAGVCSAAEIGNQELRLQVAADNDWEFRQLVNEYLRAWSPGCRKFDMALATQFYETTDRFSGYHFLAPIDGPVGWGRYGSEMAKVMSDFDQYTILPNEDDFRLTRDGTHVSTGISYRVVGRNRDRKPLDTRARVLLVWERVNDRWLICREEVTSLMSRSTAAR
Ga0307483_10335961	3300031590	Hardwood Forest Soil	STLRVASALFFVGLAGASSATEVDNQYRGLQITANTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGSVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRVVGRNREGKMLDTRARVILVWERINDRWLISREDVSALLNASNVAR
Ga0306926_120388821	3300031954	Soil	GLQMTANTDWEFKQLLNEYLRAWSPGCRKFNISGAAQFYETTDRFSGCHFLAPIAGPVGWRRYGSEMEKIMSDFDQYSILPNEDNFGFKRDGSHVSTAISYRAVGRSREGKMLDTRARVLLVWERVNDRWLISREDVTALNASSVAR
Ga0311301_125250691	3300032160	Peatlands Soil	QITADTDWEFKQLLNEYLRAWSPGCRKFDMESAAQFYETTDRFSGYHFLTATEGPVGWQRYGSEMAKIMSEFDQYTILPNEDDFLFKRDGLHVSTAISYRLVGRNREGKMLDTRARVILVWERINDRWLISREDVTALLNASNVAR
Ga0310914_117885401	3300033289	Soil	ACALFFLGLAGAGSATEVDNLYRGLQMTANTDWEFKRLLNEYLRAWSPGCRKFNISGAAQFYETTDRFSGCHFLAPIAGPVGWRRYGSEMEKIMSDFDQYSILPNEDDFGFKRDGSHVSTAISYRAVGRSREGKMLDTRARVLLVWERVNDRWLISREDVTALNASSVAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094454

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences