NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F094583

Metagenome / Metatranscriptome Family F094583

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094583
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 69 residues
Representative Sequence STLKRWVNVKRVALKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS
Number of Associated Samples 93
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.97 %
% of genes near scaffold ends (potentially truncated) 95.28 %
% of genes from short scaffolds (< 2000 bps) 86.79 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (82.075 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost
(11.321 % of family members)
Environment Ontology (ENVO) Unclassified
(18.868 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.264 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 7.61%    β-sheet: 21.74%    Coil/Unstructured: 70.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF04185Phosphoesterase 8.49
PF00171Aldedh 5.66
PF00571CBS 2.83
PF13549ATP-grasp_5 1.89
PF12728HTH_17 1.89
PF01894UPF0047 1.89
PF09678Caa3_CtaG 0.94
PF08666SAF 0.94
PF09852DUF2079 0.94
PF05977MFS_3 0.94
PF00027cNMP_binding 0.94
PF06831H2TH 0.94
PF13302Acetyltransf_3 0.94
PF04140ICMT 0.94
PF13400Tad 0.94
PF13671AAA_33 0.94
PF04828GFA 0.94
PF00694Aconitase_C 0.94
PF07690MFS_1 0.94
PF01987AIM24 0.94
PF09285Elong-fact-P_C 0.94
PF10041DUF2277 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 8.49
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 5.66
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 5.66
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 5.66
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 1.89
COG0266Formamidopyrimidine-DNA glycosylaseReplication, recombination and repair [L] 0.94
COG2013AIM24 protein, required for mitochondrial respirationEnergy production and conversion [C] 0.94
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 0.94
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.08 %
UnclassifiedrootN/A17.92 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001361|A30PFW6_1009920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1466Open in IMG/M
3300001535|A3PFW1_10460932Not Available511Open in IMG/M
3300001535|A3PFW1_10779869All Organisms → cellular organisms → Bacteria → Terrabacteria group503Open in IMG/M
3300002547|JGI24973J35851_1015176All Organisms → cellular organisms → Bacteria → Terrabacteria group1111Open in IMG/M
3300002547|JGI24973J35851_1050633All Organisms → cellular organisms → Bacteria → Terrabacteria group539Open in IMG/M
3300004081|Ga0063454_101698476All Organisms → cellular organisms → Bacteria → Terrabacteria group549Open in IMG/M
3300004153|Ga0063455_101287735All Organisms → cellular organisms → Bacteria → Terrabacteria group556Open in IMG/M
3300005175|Ga0066673_10486384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria727Open in IMG/M
3300005176|Ga0066679_10884957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium564Open in IMG/M
3300005184|Ga0066671_11059227All Organisms → cellular organisms → Bacteria → Terrabacteria group508Open in IMG/M
3300005332|Ga0066388_106393643Not Available594Open in IMG/M
3300005339|Ga0070660_101752456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria529Open in IMG/M
3300005340|Ga0070689_100953925All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300005436|Ga0070713_100356842All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300005445|Ga0070708_101088028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria749Open in IMG/M
3300005535|Ga0070684_101189967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria717Open in IMG/M
3300005548|Ga0070665_101592791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium661Open in IMG/M
3300005558|Ga0066698_10792807All Organisms → cellular organisms → Bacteria → Terrabacteria group614Open in IMG/M
3300005560|Ga0066670_10671905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria628Open in IMG/M
3300005764|Ga0066903_100431966Not Available2188Open in IMG/M
3300005764|Ga0066903_102702705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium963Open in IMG/M
3300005764|Ga0066903_104865117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium714Open in IMG/M
3300005842|Ga0068858_100962078All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300006028|Ga0070717_12076344Not Available511Open in IMG/M
3300006032|Ga0066696_10410021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria885Open in IMG/M
3300006791|Ga0066653_10593043Not Available562Open in IMG/M
3300006797|Ga0066659_10854875All Organisms → cellular organisms → Bacteria → Proteobacteria757Open in IMG/M
3300006804|Ga0079221_10562903All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium758Open in IMG/M
3300006806|Ga0079220_10091675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1553Open in IMG/M
3300009148|Ga0105243_13124575All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300009177|Ga0105248_11846127All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300009551|Ga0105238_11805746All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300010335|Ga0134063_10192884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium957Open in IMG/M
3300010361|Ga0126378_12855029Not Available551Open in IMG/M
3300010364|Ga0134066_10189925Not Available674Open in IMG/M
3300010366|Ga0126379_12268510Not Available643Open in IMG/M
3300010375|Ga0105239_12246605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300010376|Ga0126381_101340131Not Available1034Open in IMG/M
3300010376|Ga0126381_101505371Not Available972Open in IMG/M
3300011997|Ga0120162_1106586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium585Open in IMG/M
3300012010|Ga0120118_1054619All Organisms → cellular organisms → Bacteria → Terrabacteria group1001Open in IMG/M
3300012014|Ga0120159_1214828All Organisms → cellular organisms → Bacteria → Terrabacteria group508Open in IMG/M
3300012019|Ga0120139_1162574All Organisms → cellular organisms → Bacteria → Terrabacteria group585Open in IMG/M
3300012045|Ga0136623_10052766All Organisms → cellular organisms → Bacteria → Terrabacteria group1774Open in IMG/M
3300012185|Ga0136619_10389065All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012186|Ga0136620_10171867All Organisms → cellular organisms → Bacteria → Terrabacteria group972Open in IMG/M
3300012186|Ga0136620_10264499All Organisms → cellular organisms → Bacteria → Terrabacteria group750Open in IMG/M
3300012186|Ga0136620_10318982All Organisms → cellular organisms → Bacteria → Terrabacteria group671Open in IMG/M
3300012210|Ga0137378_10379834All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300012211|Ga0137377_11240275All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium675Open in IMG/M
3300012212|Ga0150985_104658854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300012212|Ga0150985_104925114Not Available622Open in IMG/M
3300012353|Ga0137367_10095867All Organisms → cellular organisms → Bacteria2189Open in IMG/M
3300012360|Ga0137375_10298554All Organisms → cellular organisms → Bacteria1458Open in IMG/M
3300012469|Ga0150984_100327381All Organisms → cellular organisms → Bacteria → Terrabacteria group532Open in IMG/M
3300012527|Ga0136633_1108147All Organisms → cellular organisms → Bacteria → Terrabacteria group1112Open in IMG/M
3300012530|Ga0136635_10012260Not Available2566Open in IMG/M
3300012669|Ga0136626_105725All Organisms → cellular organisms → Bacteria → Terrabacteria group645Open in IMG/M
3300012680|Ga0136612_10018294All Organisms → cellular organisms → Bacteria → Terrabacteria group3485Open in IMG/M
3300012684|Ga0136614_11084132All Organisms → cellular organisms → Bacteria → Terrabacteria group549Open in IMG/M
3300012902|Ga0157291_10241159All Organisms → cellular organisms → Bacteria → Terrabacteria group596Open in IMG/M
3300012911|Ga0157301_10388401All Organisms → cellular organisms → Bacteria → Terrabacteria group537Open in IMG/M
3300012957|Ga0164303_11091312All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300012958|Ga0164299_11697865All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012989|Ga0164305_11082824All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300012989|Ga0164305_11728970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium562Open in IMG/M
3300013105|Ga0157369_10427280All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300013307|Ga0157372_10303453All Organisms → cellular organisms → Bacteria1857Open in IMG/M
3300013758|Ga0120147_1050371All Organisms → cellular organisms → Bacteria → Terrabacteria group730Open in IMG/M
3300013764|Ga0120111_1146181All Organisms → cellular organisms → Bacteria → Terrabacteria group542Open in IMG/M
3300013768|Ga0120155_1019927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2219Open in IMG/M
3300013772|Ga0120158_10075097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2158Open in IMG/M
3300013772|Ga0120158_10234057All Organisms → cellular organisms → Bacteria → Terrabacteria group931Open in IMG/M
3300014157|Ga0134078_10269834Not Available721Open in IMG/M
3300014497|Ga0182008_10710353All Organisms → cellular organisms → Bacteria → Terrabacteria group575Open in IMG/M
3300015077|Ga0173483_10172418All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria974Open in IMG/M
3300015189|Ga0167667_1011115All Organisms → cellular organisms → Bacteria2691Open in IMG/M
3300015374|Ga0132255_102320635All Organisms → cellular organisms → Bacteria → Terrabacteria group819Open in IMG/M
3300017695|Ga0180121_10007660All Organisms → cellular organisms → Bacteria4058Open in IMG/M
3300017695|Ga0180121_10131388All Organisms → cellular organisms → Bacteria → Terrabacteria group910Open in IMG/M
3300017936|Ga0187821_10112926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium1008Open in IMG/M
3300018431|Ga0066655_11263492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300018468|Ga0066662_10348193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1273Open in IMG/M
3300021344|Ga0193719_10104566All Organisms → cellular organisms → Bacteria1231Open in IMG/M
3300021560|Ga0126371_13007212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium571Open in IMG/M
3300024331|Ga0247668_1010885All Organisms → cellular organisms → Bacteria1896Open in IMG/M
3300025581|Ga0208355_1061090All Organisms → cellular organisms → Bacteria → Terrabacteria group887Open in IMG/M
3300025898|Ga0207692_10053838All Organisms → cellular organisms → Bacteria2051Open in IMG/M
3300025898|Ga0207692_10858663Not Available596Open in IMG/M
3300025919|Ga0207657_11193480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria579Open in IMG/M
3300025924|Ga0207694_11405460All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300025927|Ga0207687_11694918All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300025929|Ga0207664_10715978All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300025939|Ga0207665_10987929All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300025949|Ga0207667_11840370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria569Open in IMG/M
3300028755|Ga0307316_10168554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium784Open in IMG/M
3300028828|Ga0307312_10797379Not Available626Open in IMG/M
3300030785|Ga0102757_11430590All Organisms → cellular organisms → Bacteria → Terrabacteria group628Open in IMG/M
3300031231|Ga0170824_105071436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria615Open in IMG/M
3300031939|Ga0308174_11590436Not Available561Open in IMG/M
3300031996|Ga0308176_10122398All Organisms → cellular organisms → Bacteria2332Open in IMG/M
3300032017|Ga0310899_10553025All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300032261|Ga0306920_100113217All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium4024Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand11.32%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost11.32%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.66%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.72%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.83%
Polar DesertEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert1.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.94%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.94%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001361Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002547Polar desert microbial communities from Antarctic Dry Valleys - UQ889EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011997Permafrost microbial communities from Nunavut, Canada - A15_80cm_18MEnvironmentalOpen in IMG/M
3300012010Permafrost microbial communities from Nunavut, Canada - A7_35cm_12MEnvironmentalOpen in IMG/M
3300012014Permafrost microbial communities from Nunavut, Canada - A10_80cm_6MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012045Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)EnvironmentalOpen in IMG/M
3300012185Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)EnvironmentalOpen in IMG/M
3300012186Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)EnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012527Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)EnvironmentalOpen in IMG/M
3300012530Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)EnvironmentalOpen in IMG/M
3300012669Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ487 (21.06)EnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013758Permafrost microbial communities from Nunavut, Canada - A24_65cm_12MEnvironmentalOpen in IMG/M
3300013764Permafrost microbial communities from Nunavut, Canada - A28_35cm_6MEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015189Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025581Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030785Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A30PFW6_100992013300001361PermafrostFQRYSAALGRWVLVRRVVLRANASGVAPTVISSVRFRSSIRAHLRVRAVLGRTQVGSCYLAGRSNLIHS*
A3PFW1_1046093223300001535PermafrostQRYNGTRWVAVKSVLLRANTTGVAPTVLSTATFRSAIKARLRVRVVLGTAQVGTCYLPGTSNTILS*
A3PFW1_1077986923300001535PermafrostTRWVAVKSVLLRANTTGVAPTVVSTGTFRSAVKAGVRVRVVLGQAQVGTCYLPGTSNTILS*
JGI24973J35851_101517633300002547Polar DesertTLGRWVTVKRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
JGI24973J35851_105063313300002547Polar DesertGRWVTVKRVLVRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGLSNVIRS*
Ga0063454_10169847623300004081SoilSAAQSFAGKLATFQRYRSTTKLWVKVKRVLLKANTTGVAPTVVTSAKFGARIKAKLRVRVTFGSKQVGPCYAAGRSNTIRS*
Ga0063455_10128773513300004153SoilQRYNGTRWIAVKSVLLGANATGQAPTVISSSTFRSAAKAGLRMRVVIGQAQVGTCYLPGISNTILS*
Ga0066673_1048638423300005175SoilAKKRWVKVKRVLLQADTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGACYLAGRSNTIRS*
Ga0066679_1088495713300005176SoilSATFQRYRPATKRWGSVKPVVLKANASGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0066671_1105922713300005184SoilVLPLLHLGKAGRHRYTVRVSAAQSFAGKSATFQRRAGKRWVLVKRVTLRASTTGVAPTVISSATFRSGIKARLRVRVVLGQKQVGACYLAGRSNTIRS*
Ga0066388_10639364323300005332Tropical Forest SoilGKLATFQRYRSATRRWVKVKRVLLKANTTGVAPTVITSATFRSRAKGKVRVSLGSKQVGLCYAAGHSNTIRS*
Ga0070660_10175245613300005339Corn RhizosphereKVATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS*
Ga0070689_10095392523300005340Switchgrass RhizosphereSTLKRWVNVKRVALKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0070713_10035684223300005436Corn, Switchgrass And Miscanthus RhizosphereHRYALRVSAAQSFAGKSATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0070708_10108802813300005445Corn, Switchgrass And Miscanthus RhizosphereVGHWRAVRRVLLQANSTGVAPTVVTSAKFRSGLKAGIRVRVVLGQKQVGACYLVGRSNTIRSR*
Ga0070684_10118996713300005535Corn RhizosphereVGRHRFALHVSAAESFAGKVATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS*
Ga0070665_10159279113300005548Switchgrass RhizosphereGTLQRYNGVLARWVNVKRVVLRASSTGVFPTVISTSSFRSTVQARRKIRVVMPQLQVGSCYLPGRSNTILS*
Ga0066698_1079280723300005558SoilTFQRYNGTLGRWIKVKRVLLRANATGVAPTVISSVSFRSAIRPRFKVRAVLPQLQVGSCYRPGRSNVIRS*
Ga0066670_1067190513300005560SoilAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGACYLAGRSNTIRS*
Ga0066903_10043196613300005764Tropical Forest SoilSVNVSAAESFAGKLATFQRYRSATKRWVKVKRVLLKANTTGVAPTVISSATFGALVRAGVKVRVTLGSKQVGLCYAAGHSNAIRS*
Ga0066903_10270270513300005764Tropical Forest SoilTKRWRTVKRVLLKADATGVAPTVISSAKFRSSISARVKVRVVLGQTQVGACYLAGRSNSIRS*
Ga0066903_10486511723300005764Tropical Forest SoilYATFQRYRSSTKRWVKVKRVLLQANATGIAPTVITSAAFRSGIRSGVRVRVTLGKAQVGSCYVAGTSNTIRS*
Ga0068858_10096207823300005842Switchgrass RhizosphereVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0070717_1207634423300006028Corn, Switchgrass And Miscanthus RhizosphereKQWVKVKRVPLTASAAGTAPTVITSAKFRSTIKARTRVRVTLGTKQVGACYLAGRSNTIRS*
Ga0066696_1041002113300006032SoilSKAKKRWVKVKRVLLQADTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGACYLAGRSNTIRS*
Ga0066653_1059304323300006791SoilALRRWITVKRVLLRANSTGVAPTVITTARFRSRIRAGLKVRVVLPGTQVGTCYLAGRSNTIRS*
Ga0066659_1085487513300006797SoilTTKRWVKVKLVLLKANTTGVAPTVVTAATFRSGIKANVRVRVTLGARQVGSCYLAGRSNTIRS*
Ga0079221_1056290313300006804Agricultural SoilSSTKRWVNVKRVLLRADTTGVAPTVITSAAFRSAIRSGVKVRATLGAKQVGSCYLAGRSNTIRS*
Ga0079220_1009167513300006806Agricultural SoilKRWRGVKRVLLQANSTGVAPTVFTTATFRSSLKRGIRVRVVLTQKQAGICYLAGTSNTLRTR*
Ga0105243_1312457523300009148Miscanthus RhizosphereSFAGKSATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0105248_1181334913300009177Switchgrass RhizosphereRYNGTLGRWVVVRRVVLKANTTGVAPTVITSRSFRSSVRGGLRVRTTLGQAQVGACHAPGLSNTVRS*
Ga0105248_1184612723300009177Switchgrass RhizosphereATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0105238_1180574613300009551Corn RhizosphereQTFAGKFATFQRYRSATKRWVTVERVLLKANTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS*
Ga0134063_1019288413300010335Grasslands SoilQSFAGKSATFERYRPALKRWRAVQRVLLHANSSGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0126378_1285502923300010361Tropical Forest SoilFAADTFAGKLATFQRYRSTTKRWVKVKRVLLKANTTGAAPTVITAAKFRASIKSKVRVRVTLGATQVGLCYAAGHSNTIRS*
Ga0134066_1018992523300010364Grasslands SoilRPALRRWVTVKHVLLRANSTGVAPTVITTARFRSRIRAGLNVRVVLPGTQVGTCYLAGRSNTIRS*
Ga0126379_1226851013300010366Tropical Forest SoilATFQRYRSATKRWVKVKRVLLKANTTGVAPTVISSATFGALVRAGVKVRVTLGSKQVGLCYAAGHSNTIRS*
Ga0105239_1224660523300010375Corn RhizosphereATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS*
Ga0126381_10134013123300010376Tropical Forest SoilWVKVKRVLLKSNTTGVAPTVITSAKFSSRVRAKHVRVTLGLKQVGLCYAAGRSNSIHS*
Ga0126381_10150537123300010376Tropical Forest SoilWVKVKRVLLKSNTTGVAPTVITSAKFSSRVRAKHVRVTLGPKQVGGCYAAGRSNTIHS*
Ga0120162_110658623300011997PermafrostAVKSVLLRANTTGVGPTVISSATFRSAIKARLRVRVVLGTAQVGTCYLPGTSNTILS*
Ga0120118_105461913300012010PermafrostFQRYSATLRRWLVVRRVVLRANTSGVAPTVISSVRFRSSIRARLRVRAVLGQTQVGSCYLTGRSNIIHS*
Ga0120159_121482813300012014PermafrostSAALRRWLVVRRVVLRANTSGVAPTVISSVTFRSSVRARLRVRAVLGQTQVGSCYIAGRSNIIYS*
Ga0120139_116257413300012019PermafrostRYSAALRRWVVVRRVVLRANTSGVAPTVISSVTFRSSVRARLRVRAVLGQTQVGSCYITGRSNIIYS*
Ga0136623_1005276613300012045Polar Desert SandYGTFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVAFRLTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0136619_1038906513300012185Polar Desert SandVKRVLLRANSTGVAPTVITAVSFRSTIPSRLKVRVVLPQLQAGSCYLPGLSNTILS*
Ga0136620_1017186713300012186Polar Desert SandTLGRWVKVKRVLLRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0136620_1026449913300012186Polar Desert SandRWVTVKRVLLRANSTGVAPTVISSVTFRSTIRPRLKVRVVLPQLQVGSCYRPGRSNVIRS
Ga0136620_1031898213300012186Polar Desert SandSFAGKYGTFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0137378_1037983413300012210Vadose Zone SoilKSATFERYRPALKRWRAVQRVLLHANSSGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0137377_1124027523300012211Vadose Zone SoilRPALKRWRAVQRVLLHANSSGVAPTVITSAKFRSSLKARQRVRVVLGQKQVGSCYLAGTSNTVRS*
Ga0150985_10465885423300012212Avena Fatua RhizosphereKSVLLGANATGQTPTVISSSTFRSAVKAGLRVRVVIGQAQVGTCYLPGISNTILS*
Ga0150985_10492511423300012212Avena Fatua RhizosphereVRVSAAQSFGGKLATFQRYRSTTKLWVKVKRVLLKANTTGVAPTVVTSAKFGARIKAKLRVRVTFGSKQVGPCYAAGRSNTIRS*
Ga0137367_1009586753300012353Vadose Zone SoilAVKIVLLRPNTTGLAPTVISTATFRSSIKARLRVRAVLGPAQVGTCYLPGISNTVLS*
Ga0137375_1029855413300012360Vadose Zone SoilVKVKRVLLRANRTGVAPTVITSAKFRSRIKAGLRVRVVLGQTQVGSCYLAGRSNTIRS*
Ga0150984_10032738123300012469Avena Fatua RhizosphereLLGANATGQAPTVISSSTFRSAVKAGLRVRVVIGQAQVGTCYLPGISNTILS*
Ga0136633_110814713300012527Polar Desert SandKRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0136635_1001226013300012530Polar Desert SandKRVVLKANASGVAPTVVSSVTFRSTVARRLKVRVVLPQAQVGTCYLAGTSNTILT*
Ga0136626_10572513300012669Polar Desert SandSFAGKYGAFQRFNGTLGRWVTVKRVLVRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGLSNVIRS*
Ga0136612_1001829413300012680Polar Desert SandYGTFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVSFRSTIRPLLKVRVVLSQVQVGSCYRPGRSNVIRS*
Ga0136614_1108413213300012684Polar Desert SandYGTFQRFNGTLGRWVKVKRVLLRANSTGVAPTVISSVTFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS*
Ga0157291_1024115913300012902SoilGKYGIFQRFNGTLGRWVTVKRVLLRANSTGVAPTVISSVTFRSAIRPFLKVRAVLPQLQVGSCYRPGRSNVIRS*
Ga0157301_1038840113300012911SoilVKRVLLRGNSTGVSPTVISSVTFGSTVPSRLKVRVILAQLQVGSCHAPGRSNTILA*
Ga0164303_1109131223300012957SoilRVVLKANTTGVAPTVISSATFRSGLRVKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0164299_1169786513300012958SoilLKANTTGVAPTLISSATFRSGLRAKLRVRVVLAQAQVGTCYLAGRSNTIRS*
Ga0164305_1108282423300012989SoilYALRVTAAQSFAGTSATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0164305_1172897033300012989SoilSSTGVAPAVASTASFRSAVKVGLKVRVLINQAQVGTCYLAGVSNTVRS*
Ga0157369_1042728023300013105Corn RhizosphereGRHRYALRVSAAQSFAGKSATFQRYRSTLKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS*
Ga0157372_1030345323300013307Corn RhizosphereLSVSAAQTFAGKFATFQRYRIATKRWVKVKRVLLKADTTGVAPTVVTSATFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS*
Ga0120147_105037123300013758PermafrostFQRYSAALRRWVVVRRVVLRANTSGVAPTVISSVTFRSSVRARLRVRAVLGQTQVGSCYLAGRSNIIYS*
Ga0120111_114618113300013764PermafrostRWVVIRRVVLRANASGIAPTLISSVTFRSGVRARLRVRAVLGQTQVGSCYLAGRSNIIYS
Ga0120155_101992753300013768PermafrostVKVKRVLLRANSTGIAPTVISSVSFRSTIKPRLKVRVILPQLQVGSCYLSGRSNVILS*
Ga0120158_1007509743300013772PermafrostQSFAGKSASFQRYSAALGRWVLVRRVVLRANTSGVAPTVISSVRFRSSIRARLRVRAVLGQTQVGSCYLTGRSNIIHS*
Ga0120158_1023405723300013772PermafrostASFQRYSAALRRWVLVRRVALRANASGVAPTMISSVTFRSSIRARLRVRAVLGQTQVGSCYIAGRSNIIYS*
Ga0134078_1026983413300014157Grasslands SoilSVPLKASTAGVAPTVLSTVSFRSTVKARLRVRVALGQAQVGGCYAPGLSNTIYS*
Ga0182008_1071035313300014497RhizosphereLHADSSGKAPTVVSSVKFRSSVKARVRVVLVQKQVGSCYAAGTSNTIRAR*
Ga0173483_1017241813300015077SoilLQRYIGTRHRWVNVKRVLLRANMTGVAPTVISSVTFRSSIRALLKIRVVLPKLQVGTCYVAGRSNVILS*
Ga0167667_101111543300015189Glacier Forefield SoilNTTLARWVNVKRVLLRPNSTGVAPTVISTASFRSTVPSRLKIRVVLPQLQVGSCYTAGRSNTILS*
Ga0132255_10232063533300015374Arabidopsis RhizosphereSATFQRYNSALKRWVKVKRVLLKANTTGVAPTVISSTNFRSGLRAKLRVRAVLGQAQVGTCYLAGRSNTIRS*
Ga0180121_1000766063300017695Polar Desert SandKRVVLKANASGVAPTVVSSVTFRSTVARRLKVRVVLPQAQVGTCYLAGTSNTILT
Ga0180121_1013138813300017695Polar Desert SandTVKRVLLRANSTGVAPTVISSVAFRSTIRPLLKVRVVLPQLQVGSCYRPGRSNVIRS
Ga0187821_1011292613300017936Freshwater SedimentKTKKRWVKVKRVVLHADTTGVAPTVVTSATFRSGIKARQRVRVTLGAKQVGSCYLAGRSNTIRS
Ga0066655_1126349213300018431Grasslands SoilRYRPTTKRWVKVKLVLLKANTTGVAPTVVTAATFRSSITAGVRVRVTLGARQVGSCYLAGRSNTIRS
Ga0066667_1146562323300018433Grasslands SoilTKAAKHQYSLKVFAAQTFAGTFATFQRYRKATRRWVKVKRVLLKANTTGTAPTVITSAKFRSSIRARLRVRAILGSKQVGPCYAAGRSNTIRS
Ga0066662_1034819343300018468Grasslands SoilLRVPAAQSFTRKYKTLQRYRATTKRRVNVKLVLPKANTTGVAPTGVNAATYRSGIKANVRVRVTLGARQVGSCYLAGRSNTIRS
Ga0193719_1010456633300021344SoilVRRWLKVRSVLMRPNATGVAPTVISSATFRSKVKLRLRVRVVLGQAQVGSCYLAGRSNVIRS
Ga0126371_1300721213300021560Tropical Forest SoilSFAGKYATFQRYRAATKRWSTVKRVLLKADTSGKAPTVVTSAKFRANLKARTRVRVLLGQKQVGSCYLAGRSNTIRS
Ga0247668_101088533300024331SoilTVKRVLLKANTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0208355_106109023300025581Arctic Peat SoilVKSVLLRANTTGVAPTVLSTATFRSAIKARLRVRVVLGTAQVGTCYLPGTSNTILS
Ga0207692_1005383813300025898Corn, Switchgrass And Miscanthus RhizosphereAAQTFAGKFATFQRYRSATKRWVKVKRVLLKADTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0207692_1085866313300025898Corn, Switchgrass And Miscanthus RhizosphereFAGKLATFQRYGSTTKRWVKVKRVLLKPNTSGAAPTVITSARFRSSIRAKLRVRVTLGSKQVGPCYAAGHSNTIRS
Ga0207657_1119348013300025919Corn RhizosphereMAGTLREWIAKTGKRGKVATFQRYSTAKKRWVKVKRVLLQANTTGVAPTVITSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS
Ga0207694_1140546013300025924Corn RhizosphereQRYRSATKRWVKVKRVLLKADTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0207687_1169491813300025927Miscanthus RhizosphereATFQRYRSTIKRWVNVKRVVLKANTTGVAPTVISSATFRSGLRAKLRVRVVLGQAQVGTCYLAGRSNTIRS
Ga0207664_1071597813300025929Agricultural SoilKTAKRHYALSVSAAQTFAGKFATFQRYRSATKRWVKVKRVLLKADTTGVAPTVVTSAKFRARIKAKLRVRVILGSKQVGSCYAAGRSNTIRS
Ga0207665_1098792913300025939Corn, Switchgrass And Miscanthus RhizosphereKGVKRVLLKANTTGTAPTVLTTAKFRSSLKAKLRVRVVLKQTQVGACYAAGTSNTIRS
Ga0207667_1184037023300025949Corn RhizosphereSAAQSYVGKYVLFQRYRPALSRWVTVKRVVLRRAVPATAPTVVSSATFRSGIKAKQRVRVTLGAKQVGSCYLAGRSNTIRS
Ga0307316_1016855423300028755SoilWVTVKRVLLRANSTGVAPTVISSVTFRSSIRARLKIRVVMPQLQVGACYVAGRSNVILS
Ga0307312_1079737913300028828SoilKRVLLKANSTGVAPTVVTSRRFRSSVRRGLRVRVTLGQTQVGSCYAPGLSNTILS
Ga0102757_1143059023300030785SoilSFQRYRLALRRWVTVKRVLLRANATGVAPTVITSAKFRSRINAGLRVRVVLGQTQVGSCYLAGRSNTIRS
Ga0170824_10507143613300031231Forest SoilLKRWVSVKRVLLLANNTGVVPTVITSAKFRSALRANLRVRVVLGQKQVGSCYLAGRSNTIRS
Ga0306923_1245933423300031910SoilPKLQLKKVSRHHYSLQVLAAESFAGKLATFQRLTATKKWVKVKRVLLKANTTGVAPTVITAAKFGARVNAKHVRVSLGSKQVGLCYAAGHSNSIHS
Ga0308174_1159043623300031939SoilRQATRRWVKVKRVTLKANATGVAPTVITSAKFRSRIKAKLRVRVSLGSKQVGLCYVAGRSNTIRS
Ga0308176_1012239843300031996SoilVSAAQSFAGKQATFQRYKKATKRWVKVKRVKLKANTTGVAPTVVTSAKFRSKIKSRLKVRIVLGPKQVGACYAAGRSNTIRS
Ga0310899_1055302513300032017SoilYNGTLRRWIRVKRILLRANGTGVAPTVISSVAFRSAIKPRLKVRVILPQLQVGSCYRPGRSNVILS
Ga0306920_10011321753300032261SoilSRHHYSLQVLAAESFAGKLATFQRLTATKKWVKVKRVLLKANTTGVAPTVITAAKFGARVNAKHVRVSLGSKQVGLCYAAGHSNSIHS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.