NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F094594

Metagenome Family F094594

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094594
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 62 residues
Representative Sequence MCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR
Number of Associated Samples 92
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 45.28 %
% of genes near scaffold ends (potentially truncated) 47.17 %
% of genes from short scaffolds (< 2000 bps) 79.25 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (83.962 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(18.868 % of family members)
Environment Ontology (ENVO) Unclassified
(34.906 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.887 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 65.08%    β-sheet: 0.00%    Coil/Unstructured: 34.92%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF02620YceD 50.00
PF02504FA_synthesis 33.02
PF01467CTP_transf_like 4.72
PF09529Intg_mem_TP0381 1.89
PF00793DAHP_synth_1 1.89
PF08545ACP_syn_III 1.89
PF00582Usp 0.94
PF04909Amidohydro_2 0.94
PF03968LptD_N 0.94
PF03734YkuD 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG139923S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria)Translation, ribosomal structure and biogenesis [J] 50.00
COG0416Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)Lipid transport and metabolism [I] 33.02
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.94
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.96 %
UnclassifiedrootN/A16.04 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886007|SwRhRL2b_contig_1397677All Organisms → cellular organisms → Bacteria834Open in IMG/M
2166559006|FI_contig07909All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1154Open in IMG/M
2170459002|FZY7DQ102HVGTANot Available505Open in IMG/M
2189573002|GZIGXIF02H6H4KNot Available518Open in IMG/M
3300002568|C688J35102_120272623All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus961Open in IMG/M
3300005167|Ga0066672_10063671All Organisms → cellular organisms → Bacteria2158Open in IMG/M
3300005180|Ga0066685_10010179All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5230Open in IMG/M
3300005187|Ga0066675_10981369Not Available635Open in IMG/M
3300005290|Ga0065712_10320584All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300005290|Ga0065712_10530686All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005329|Ga0070683_100010114All Organisms → cellular organisms → Bacteria8093Open in IMG/M
3300005332|Ga0066388_100110267All Organisms → cellular organisms → Bacteria3244Open in IMG/M
3300005332|Ga0066388_103729141All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300005337|Ga0070682_101135135All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia656Open in IMG/M
3300005439|Ga0070711_100067617All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2508Open in IMG/M
3300005451|Ga0066681_10052838All Organisms → cellular organisms → Bacteria2225Open in IMG/M
3300005518|Ga0070699_100888510All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300005547|Ga0070693_101595999All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium512Open in IMG/M
3300005548|Ga0070665_102399506All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium530Open in IMG/M
3300005556|Ga0066707_10391390Not Available905Open in IMG/M
3300005560|Ga0066670_10106545All Organisms → cellular organisms → Bacteria1579Open in IMG/M
3300005578|Ga0068854_100487515All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300005587|Ga0066654_10401326Not Available747Open in IMG/M
3300005618|Ga0068864_100039569All Organisms → cellular organisms → Bacteria4030Open in IMG/M
3300005937|Ga0081455_10184844All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300009092|Ga0105250_10370683All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia630Open in IMG/M
3300009143|Ga0099792_10390827All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300009156|Ga0111538_12065301All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia716Open in IMG/M
3300009176|Ga0105242_11059296All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300010042|Ga0126314_10855097All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300010159|Ga0099796_10055052All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300010358|Ga0126370_12236327All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium540Open in IMG/M
3300010376|Ga0126381_100278672All Organisms → cellular organisms → Bacteria2280Open in IMG/M
3300010376|Ga0126381_101134328All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1130Open in IMG/M
3300011119|Ga0105246_10800855All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300012201|Ga0137365_10016260All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus5820Open in IMG/M
3300012204|Ga0137374_10027168All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus6344Open in IMG/M
3300012204|Ga0137374_10627722Not Available816Open in IMG/M
3300012210|Ga0137378_10073717All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus3101Open in IMG/M
3300012353|Ga0137367_10685081Not Available714Open in IMG/M
3300012358|Ga0137368_10023532All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus5754Open in IMG/M
3300012359|Ga0137385_10230587All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1609Open in IMG/M
3300012683|Ga0137398_10508879All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300012685|Ga0137397_10839111All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium682Open in IMG/M
3300012901|Ga0157288_10015762All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter1361Open in IMG/M
3300012910|Ga0157308_10019403All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1507Open in IMG/M
3300012918|Ga0137396_11061020All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium582Open in IMG/M
3300012924|Ga0137413_10012920All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus4168Open in IMG/M
3300012924|Ga0137413_10765120All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300012927|Ga0137416_10236174All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1486Open in IMG/M
3300012971|Ga0126369_11199922All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300012971|Ga0126369_11934368All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300012987|Ga0164307_10398361All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1013Open in IMG/M
3300012989|Ga0164305_10332825All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1136Open in IMG/M
3300013102|Ga0157371_10286226All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1191Open in IMG/M
3300013105|Ga0157369_12333640All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium542Open in IMG/M
3300013296|Ga0157374_10879937All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus913Open in IMG/M
3300014166|Ga0134079_10508057All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia583Open in IMG/M
3300014325|Ga0163163_10281183All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1715Open in IMG/M
3300014745|Ga0157377_10651496All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium758Open in IMG/M
3300015242|Ga0137412_10018701All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus5635Open in IMG/M
3300015265|Ga0182005_1012940All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2351Open in IMG/M
3300015371|Ga0132258_11381055All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1780Open in IMG/M
3300015371|Ga0132258_13726443All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1039Open in IMG/M
3300015371|Ga0132258_13732245All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus1039Open in IMG/M
3300015372|Ga0132256_102552155Not Available612Open in IMG/M
3300015374|Ga0132255_101870210All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus912Open in IMG/M
3300016387|Ga0182040_10276788Not Available1273Open in IMG/M
3300018053|Ga0184626_10129702Not Available1072Open in IMG/M
3300019883|Ga0193725_1009608All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2753Open in IMG/M
3300019886|Ga0193727_1035572All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1678Open in IMG/M
3300020005|Ga0193697_1153636Not Available508Open in IMG/M
3300020140|Ga0179590_1208229Not Available536Open in IMG/M
3300024186|Ga0247688_1014000All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1143Open in IMG/M
3300025271|Ga0207666_1019177Not Available997Open in IMG/M
3300025916|Ga0207663_10116596All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1821Open in IMG/M
3300025927|Ga0207687_11577780All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium563Open in IMG/M
3300025929|Ga0207664_11845279All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia527Open in IMG/M
3300025930|Ga0207701_10012691All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia8230Open in IMG/M
3300025930|Ga0207701_11188131All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia629Open in IMG/M
3300025934|Ga0207686_10702581All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus804Open in IMG/M
3300025944|Ga0207661_10029178All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus4234Open in IMG/M
3300026312|Ga0209153_1256728Not Available562Open in IMG/M
3300026326|Ga0209801_1021975All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria3117Open in IMG/M
3300026329|Ga0209375_1236826All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium627Open in IMG/M
3300027512|Ga0209179_1119351All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium589Open in IMG/M
3300027874|Ga0209465_10147086Not Available1169Open in IMG/M
3300027903|Ga0209488_10396708All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1021Open in IMG/M
3300028536|Ga0137415_10060269All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria3661Open in IMG/M
3300028755|Ga0307316_10065889All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus1233Open in IMG/M
3300031231|Ga0170824_102880357All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia646Open in IMG/M
3300031231|Ga0170824_111531077All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium553Open in IMG/M
3300031231|Ga0170824_125012549All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium646Open in IMG/M
3300031446|Ga0170820_10939599All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia601Open in IMG/M
3300031446|Ga0170820_13230850All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300031469|Ga0170819_14148663All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium713Open in IMG/M
3300031562|Ga0310886_10458283All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300031716|Ga0310813_11009187All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300031740|Ga0307468_100656880All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300031744|Ga0306918_10121236All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria1895Open in IMG/M
3300031744|Ga0306918_11121507All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium609Open in IMG/M
3300032205|Ga0307472_101472696Not Available663Open in IMG/M
3300032261|Ga0306920_102747921All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300033412|Ga0310810_10074951All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus4081Open in IMG/M
3300033412|Ga0310810_10226348All Organisms → cellular organisms → Bacteria2084Open in IMG/M
3300034354|Ga0364943_0082903Not Available1101Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.43%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil5.66%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.83%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.83%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.94%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.94%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.94%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886007Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
2166559006Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembledEnvironmentalOpen in IMG/M
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
2189573002Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024186Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
SwRhRL2b_0741.000063102162886007Switchgrass RhizosphereMCDGTLLPHCGHLFSGDACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR
FI_007694002166559006Grass SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPIAGAYQSIIRRNYNQRLRDSLNR
E1_072998402170459002Grass SoilMCEGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVLRFGTPIAGAYLSIIRRNYNQRLR
FE1_014446802189573002Grass SoilMCDGTLLPHCGHLLSCDACQRFAAFRVRNRIFDVLRFGTPIAGAYQSIIRRNYNQRLRDS
C688J35102_12027262323300002568SoilMCDGTLLPHCGHLLSCAACHRFAAFRVRNRIFDVFRFGTPMAGAYQSIIRRNYNQRLRDSLNCKWLIGPLQRFSD*
Ga0066672_1006367123300005167SoilVCDATVLPHCGHLLSCDACHRFAALRVRNRIFEVLRFGTPMSACYESMVLRNKQTGEVIR
Ga0066685_1001017933300005180SoilMCEGTLLPHWEHLFRCAACHRFAALRVRNRILDVLRFGTPIAGGYRSIIRRNYNHRLGDSFNR*
Ga0066675_1098136923300005187SoilMCDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNPLHRAASTVQRFND*
Ga0065712_1032058413300005290Miscanthus RhizospherePHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRNYNQRLRDSLSR*
Ga0065712_1053068623300005290Miscanthus RhizospherePHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0070683_10001011473300005329Corn RhizosphereMCDGTLLPHCGHLFSGDARQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR*
Ga0066388_10011026743300005332Tropical Forest SoilMCDGTLLPHCGHLFSCEACQRFAAFRVRNRIFDVFRFGTPMAGAYQSIIQRNYNQRLRDSLNR*
Ga0066388_10372914123300005332Tropical Forest SoilMWDGTLLPHCGHLLSCEACQRFAAFRMRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNC*
Ga0070682_10113513513300005337Corn RhizosphereMCDGTLLPHCGHLFSGDACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR*
Ga0070711_10006761743300005439Corn, Switchgrass And Miscanthus RhizosphereMCDGRLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNC*
Ga0066681_1005283823300005451SoilMCDGMLLPHCGHLLSCAACQRFAAFRVRNRIFDVFRFGTPMAGAYQSIIHRNYNRRLRDSLSR*
Ga0070699_10088851013300005518Corn, Switchgrass And Miscanthus RhizosphereQAICDGTLLPHCGHLLSCTACQRFAAFRVRNRIFDVFRFGTPMTGAYQSIIHRNYNRRLRDSLNR*
Ga0070693_10159599913300005547Corn, Switchgrass And Miscanthus RhizosphereAICDGKLLPHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0070665_10239950613300005548Switchgrass RhizosphereDGQAMCDGTLLPHCGHLFNCEACQRLAALRKRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR*
Ga0066707_1039139023300005556SoilMCEGTLLPHWEHLFRCAACHRFAALRVRNRILDVLRFGTPIAGGYRSIIRRNYNHRLGDSFN
Ga0066670_1010654523300005560SoilMCDGTLLPHCGHLFSCAACHRFAAFRVRNRIFDVFRFGTPMAGAYQSIIRRNYNQRLRDSLNRNG*
Ga0068854_10048751533300005578Corn RhizosphereLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0066654_1040132623300005587SoilMCDGTLLPHCGHLFSCAACHRFAAFRVRNRIFDVFRFGTPMAGAYQSIIRRNYNQRLRDSLNRKWLIGPLQRFSD*
Ga0068864_10003956953300005618Switchgrass RhizosphereMCDGTLLPHCGHLFSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR*
Ga0081455_1018484443300005937Tabebuia Heterophylla RhizosphereMCDGRLLPHWGHLFNCGACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLSR*
Ga0105250_1037068323300009092Switchgrass RhizosphereMCDGTLLPHCGHLFSGDACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR*
Ga0099792_1039082733300009143Vadose Zone SoilHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR*
Ga0111538_1206530123300009156Populus RhizosphereMCDGTLLPHCGHLFSCEACQRFAALRMRNRLFDVLRFGTPMAGAYKSIFRRNYNQRLCDSLTVRALD
Ga0105242_1105929633300009176Miscanthus RhizosphereICDGKLLPHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0126314_1085509723300010042Serpentine SoilGTLLPHCGHLFSWEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLGVLVNC
Ga0099796_1005505223300010159Vadose Zone SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR*
Ga0126370_1223632713300010358Tropical Forest SoilHDGQAMCDGTLLPHCGHLFNCEACQRFAAFRVRNRIFDVFRFGTPMAGAYQSIIQRNYNQRLRDSLNR*
Ga0126381_10027867243300010376Tropical Forest SoilPHDGQAICDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVFRFGTPMTGAYQSIIHRNYNRRLGDSLNR*
Ga0126381_10113432823300010376Tropical Forest SoilMCDGTLLPHCGHLFSREACQRFAAFLVRNRIFDVLRFGTPMAGAYQSIIRRNYNLRVRSLKR*
Ga0105246_1080085513300011119Miscanthus RhizosphereMCDGTLLPHCGHLFSGDACQRFASFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR*
Ga0137365_1001626023300012201Vadose Zone SoilVCDATVLPHCGHLLSCDACHRFAALRVRNRIFEVLRFGTPMSAGYESMVLRNKQIGEVIR
Ga0137374_1002716823300012204Vadose Zone SoilMCDGTLLPHCGHLLRCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRGSLNR*
Ga0137374_1062772213300012204Vadose Zone SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRGSLN
Ga0137378_1007371743300012210Vadose Zone SoilVCDATVLPHCGHLLSCDACHRFAALRVRNRIFEVLRFGTPMSAGYESMVLRNKQTGEVIR
Ga0137367_1068508113300012353Vadose Zone SoilVCDATVLPHCGHLLSCDACHRFAALRVRNRIFEVLRFGTPMSAGYESMVLRNKQIGEV
Ga0137368_1002353293300012358Vadose Zone SoilCGHLLRCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRGSLNR*
Ga0137385_1023058743300012359Vadose Zone SoilICDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVFRFGTPIAGAYQSIIHPNYNRRLGDSLIR*
Ga0137398_1050887923300012683Vadose Zone SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNH*
Ga0137397_1083911113300012685Vadose Zone SoilMCDGTLLPHCGHLLSCDACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR*
Ga0157288_1001576213300012901SoilDGKLLPHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0157308_1001940343300012910SoilPHDGHAICDGKLLPHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRNYNQRLRDSLSR*
Ga0137396_1106102013300012918Vadose Zone SoilLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR*
Ga0137413_1001292073300012924Vadose Zone SoilDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVFRFGTPIAGAYQSIIHPNYNRRLGDSLIR*
Ga0137413_1076512023300012924Vadose Zone SoilMCDGTLLPHCEHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR*
Ga0137416_1023617443300012927Vadose Zone SoilGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR*
Ga0126369_1119992223300012971Tropical Forest SoilGTLLPHCGHLLSCEACQRFDALRVRKRIFDVLRFGTPMADAYQSIIRRNYNQRLRDSLNC
Ga0126369_1193436813300012971Tropical Forest SoilTCDGTLLPHCGHLFSCEACQRFAALRVRNRIFDVLRFGTPIAGAYQSIIRPNYNQ*
Ga0164307_1039836133300012987SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMTGAYQSIIPRNYNRHLIDSLNR*
Ga0164305_1033282533300012989SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPIAGAYQSIIRRNYNQRLRDSLNR*
Ga0157371_1028622613300013102Corn RhizosphereCDGKLLPHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0157369_1233364023300013105Corn RhizosphereCGHLLSSDACQRFAALRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0157374_1087993713300013296Miscanthus RhizosphereHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRNYNQRLRDSLSR*
Ga0134079_1050805713300014166Grasslands SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNPLHRAASTVQRFND*
Ga0163163_1028118343300014325Switchgrass RhizosphereDGTLLPHCGHLFSGDACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR*
Ga0157377_1065149613300014745Miscanthus RhizosphereMCDGTLLPHCGHLFSCEACQRFAVLRMRNRIFDVLRFGTPMAGAYLSIIRRIYNQLLHDSSNR*
Ga0137412_1001870133300015242Vadose Zone SoilMCDGKLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR*
Ga0182005_101294043300015265RhizosphereMCEGRLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR*
Ga0132258_1138105543300015371Arabidopsis RhizosphereCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRNYNQRLRDSLSR*
Ga0132258_1372644333300015371Arabidopsis RhizosphereGTLLPHCGHLLSCEACHRLAAFRVRNRIFDVLRFGTPMAGVYQSIIRRNYNQRLRDSLNH
Ga0132258_1373224513300015371Arabidopsis RhizosphereCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR*
Ga0132256_10255215523300015372Arabidopsis RhizosphereMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFATPMAGAYQSIIRRNYNQRVRDSFNR*
Ga0132255_10187021013300015374Arabidopsis RhizosphereGTLLPHCGHLLSCEACHRLAAFRVRNRIFDVLRFGTPMAGVYQSIIRRNYNQRPRDSLNH
Ga0182040_1027678813300016387SoilMCDGTLLPHCGHLFSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRQNYNQRLYDSLNL
Ga0184626_1012970213300018053Groundwater SedimentMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR
Ga0193725_100960833300019883SoilMCDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVLRFGTPIAGAYQSIIRRNYNQRLRDSLNR
Ga0193727_103557223300019886SoilMCDGTLLPHCGHLLSCDACQRFAAFRVRNRIFDVLRFGTPIAGAYQSIIRRNYNQRLRDSLNR
Ga0193697_115363613300020005SoilMCEGRLLPHWGHLLSCEACQRFAALRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR
Ga0179590_120822923300020140Vadose Zone SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR
Ga0247688_101400023300024186SoilMCDGRLLPHCGHLLSCAACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRVRDSLNR
Ga0207666_101917713300025271Corn, Switchgrass And Miscanthus RhizosphereMCDGTLLPHCGHLFSGDACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR
Ga0207663_1011659623300025916Corn, Switchgrass And Miscanthus RhizosphereMCDGRLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDWLNC
Ga0207687_1157778023300025927Miscanthus RhizosphereQDGQAMCDGTLLPHCGHLFSGDACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR
Ga0207664_1184527913300025929Agricultural SoilMCDGTLLPHCGHLLSCAACQLFAAFRVRNRIFDVLRFGTPMAGAYQSIIHRNYNRRLRDSLNR
Ga0207701_10012691123300025930Corn, Switchgrass And Miscanthus RhizosphereMCDGTLLPHCGHLFNCEACQRLAALRERNRIFDVLRFGTPMAGAYQSIIRWNYNQRLRDSLNRESVKSG
Ga0207701_1118813113300025930Corn, Switchgrass And Miscanthus RhizospherePHDGHAVCDATALPHCGHLFRCGACQRFAALRVRNRIFDVLRFGTPMAGRYGSMVLGEKQPGRLRDLS
Ga0207686_1070258133300025934Miscanthus RhizosphereLLPHCGHLLSSDACQRFAAFRVRNRIFDVFRFGTPMTGAYESIIPRKYNQRLRDSLSR
Ga0207661_1002917863300025944Corn RhizosphereMCDGTLLPHCGHLFSGDARQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR
Ga0209153_125672813300026312SoilMCEGTLLPHWVHSFSCAARHRFAALRMRKRILDVLRFGTPIAGGYRSIIRRNYNHH
Ga0209801_102197533300026326SoilMRRYDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVFRFGTPMAGAYQSIIHPNYNRRLRDSLNR
Ga0209375_123682613300026329SoilDGQAICDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVFRFGTPMAGAYQSIIHPNYNRRLRDSLNR
Ga0209179_111935113300027512Vadose Zone SoilLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR
Ga0209465_1014708623300027874Tropical Forest SoilMCDGTLLPHCGHLFNCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLCDSLNR
Ga0209488_1039670843300027903Vadose Zone SoilHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR
Ga0137415_1006026923300028536Vadose Zone SoilMCDGKLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPISGAYQSIIRRNYNQRLRDSLNR
Ga0307316_1006588913300028755SoilMCDGRLLPHCGHLLSCDACQRFAAFRVRNRIFDVLRFGTPIAGAYQSIIPRNYNQRLRDSLNR
Ga0170824_10288035723300031231Forest SoilMCDGTLLPHCGHLLSCDACQRFAALRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQR
Ga0170824_11153107713300031231Forest SoilMCDGTLLPHWGHLFSSEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNRRLRDSLNC
Ga0170824_12501254923300031231Forest SoilMCDGKLLPHCGHLLSCDACQRFAAFRVRNRIFDVLRFGTPMTGAYQSINRRNYNQRLRNSLNR
Ga0170820_1093959923300031446Forest SoilMCDGTLLPHCGHLLSCKACQRFAAFRVRNRIFDVFRFGTPIAGAYQSIIRRNYN
Ga0170820_1323085013300031446Forest SoilHLLSCEACQRFAAFRVRNRIFDVLRFGTPMTGAYQSINRRNYNRRLRNSSNR
Ga0170819_1414866323300031469Forest SoilMCDGTLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRD
Ga0310886_1045828323300031562SoilHDGQAMCDGTLLPHCGHLLSCDVCQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIHRNYNQRLRDSLNR
Ga0310813_1100918723300031716SoilPHCGHLFSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYKSIIRRNYNWRLRDSLNLWGVE
Ga0307468_10065688023300031740Hardwood Forest SoilMCDGTLLPHCGHLFSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLKR
Ga0306918_1012123623300031744SoilMCDGTLLPHCGHLFNCEACQRFAAFRMRNRIFDVLRFGTPMAGAYQSMIHRNYNQRLRDSLSR
Ga0306918_1112150723300031744SoilMCDGTLLPHCGHLFNCEACQRFAAFLVRNRIFDVLRFGTPMAGAYQSIIRRNYNQPQRDSFNA
Ga0307472_10147269623300032205Hardwood Forest SoilMCDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLFDSLNL
Ga0306920_10274792123300032261SoilHCGHLLSCEACQRFAAFRVRNRILDVLRFGTPMAGAYQSIIRRNYNQRVRDSLNC
Ga0310810_1007495163300033412SoilMCEGRLLPHCGHLLSCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRVRASLNR
Ga0310810_1022634843300033412SoilMCDGTLLPHCGHLFNCEACQRFAAFRVRNRIFDVLRFGTPMAGAYQSIIRRNYNQRLRDSLNR
Ga0364943_0082903_801_9923300034354SedimentMCDGTLLPHCGHLLSCAACQRFAAFRVRNRIFDVLRFGTPMAGGYQSIIHRNYNQRLRDSLNR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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