Metagenome Family F094680

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094680
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	96 residues
Representative Sequence	MDPAPPSSVPPKILESVGRHFGVPDGVLDVLVSEVVLQGPRVVAIIGQLEPAGMAKHVRVDREWHLGGLPEALDEAMEADGADRPTALGHEYVG
Number of Associated Samples	61
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.92 %
% of genes near scaffold ends (potentially truncated)	72.38 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (54.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.238 % of family members)
Environment Ontology (ENVO)	Unclassified (81.905 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.238 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.20% Coil/Unstructured: 91.80%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01758	SBF	5.71
PF12787	EcsC	3.81
PF04392	ABC_sub_bind	2.86
PF10030	DUF2272	0.95
PF05050	Methyltransf_21	0.95
PF09250	Prim-Pol	0.95
PF01527	HTH_Tnp_1	0.95
PF00589	Phage_integrase	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.62 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	13.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.86 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.95 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	12.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.95 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.95 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	12.38 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.90 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.95 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.95 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	12.38 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.95 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.95 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.95 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	12.38 %
Nonlabens	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Nonlabens	0.95 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.95 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.95 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	12.38 %
Nonlabens spongiae	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Nonlabens → Nonlabens spongiae	0.95 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.95 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.95 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_101096648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1347	Open in IMG/M
3300005332\|Ga0066388_103045543	Not Available	856	Open in IMG/M
3300005332\|Ga0066388_103538649	Not Available	797	Open in IMG/M
3300005332\|Ga0066388_104831398	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300005332\|Ga0066388_105034625	Not Available	671	Open in IMG/M
3300005332\|Ga0066388_106283239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	599	Open in IMG/M
3300005713\|Ga0066905_100353409	Not Available	1175	Open in IMG/M
3300005713\|Ga0066905_100680690	Not Available	880	Open in IMG/M
3300005713\|Ga0066905_101496417	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300005764\|Ga0066903_105477228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	669	Open in IMG/M
3300005764\|Ga0066903_105642809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300005764\|Ga0066903_108805498	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300012948\|Ga0126375_10645232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	816	Open in IMG/M
3300012985\|Ga0164308_11748751	Not Available	578	Open in IMG/M
3300012989\|Ga0164305_11057345	Not Available	694	Open in IMG/M
3300012989\|Ga0164305_12070143	Not Available	521	Open in IMG/M
3300016270\|Ga0182036_10121111	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300016294\|Ga0182041_10743318	Not Available	873	Open in IMG/M
3300016294\|Ga0182041_11230650	Not Available	683	Open in IMG/M
3300016341\|Ga0182035_10439282	Not Available	1104	Open in IMG/M
3300016422\|Ga0182039_10723154	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300016422\|Ga0182039_12254605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300018482\|Ga0066669_11931435	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031544\|Ga0318534_10365360	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300031544\|Ga0318534_10860418	Not Available	508	Open in IMG/M
3300031545\|Ga0318541_10306410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	885	Open in IMG/M
3300031545\|Ga0318541_10839288	Not Available	513	Open in IMG/M
3300031561\|Ga0318528_10085176	All Organisms → cellular organisms → Bacteria → Proteobacteria	1644	Open in IMG/M
3300031564\|Ga0318573_10145152	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300031573\|Ga0310915_10106853	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300031573\|Ga0310915_10141854	Not Available	1656	Open in IMG/M
3300031573\|Ga0310915_10153246	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300031679\|Ga0318561_10230090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1009	Open in IMG/M
3300031680\|Ga0318574_10346850	Not Available	865	Open in IMG/M
3300031681\|Ga0318572_10179563	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300031681\|Ga0318572_10405661	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300031713\|Ga0318496_10519516	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300031747\|Ga0318502_10193847	Not Available	1173	Open in IMG/M
3300031747\|Ga0318502_10544227	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031747\|Ga0318502_10768433	Not Available	583	Open in IMG/M
3300031751\|Ga0318494_10131371	Not Available	1401	Open in IMG/M
3300031751\|Ga0318494_10377307	Not Available	822	Open in IMG/M
3300031765\|Ga0318554_10357889	Not Available	829	Open in IMG/M
3300031768\|Ga0318509_10099948	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300031780\|Ga0318508_1089292	Not Available	849	Open in IMG/M
3300031781\|Ga0318547_10127822	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300031781\|Ga0318547_10477062	Not Available	769	Open in IMG/M
3300031792\|Ga0318529_10142555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300031793\|Ga0318548_10076706	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300031793\|Ga0318548_10354351	Not Available	720	Open in IMG/M
3300031794\|Ga0318503_10111256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	873	Open in IMG/M
3300031805\|Ga0318497_10289062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	912	Open in IMG/M
3300031832\|Ga0318499_10226547	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300031846\|Ga0318512_10229462	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300031879\|Ga0306919_10493778	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031879\|Ga0306919_10599125	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300031890\|Ga0306925_10079748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3458	Open in IMG/M
3300031890\|Ga0306925_10474668	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300031890\|Ga0306925_10843255	Not Available	947	Open in IMG/M
3300031890\|Ga0306925_11031102	Not Available	836	Open in IMG/M
3300031890\|Ga0306925_11892540	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031910\|Ga0306923_10874127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	987	Open in IMG/M
3300031912\|Ga0306921_10709367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1155	Open in IMG/M
3300031912\|Ga0306921_10724341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1141	Open in IMG/M
3300031912\|Ga0306921_11425595	Not Available	760	Open in IMG/M
3300031941\|Ga0310912_10941207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300031946\|Ga0310910_10315500	Not Available	1231	Open in IMG/M
3300031946\|Ga0310910_11539416	Not Available	509	Open in IMG/M
3300031947\|Ga0310909_10109904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2226	Open in IMG/M
3300031947\|Ga0310909_10399369	Not Available	1154	Open in IMG/M
3300031954\|Ga0306926_10674839	Not Available	1255	Open in IMG/M
3300031954\|Ga0306926_11750243	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300031954\|Ga0306926_11991236	Not Available	653	Open in IMG/M
3300031954\|Ga0306926_12535028	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031959\|Ga0318530_10056503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1489	Open in IMG/M
3300031981\|Ga0318531_10057960	Not Available	1656	Open in IMG/M
3300032001\|Ga0306922_10083136	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Nonlabens → Nonlabens spongiae	3364	Open in IMG/M
3300032001\|Ga0306922_10431500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1409	Open in IMG/M
3300032025\|Ga0318507_10017831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2473	Open in IMG/M
3300032025\|Ga0318507_10191564	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300032039\|Ga0318559_10142962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1083	Open in IMG/M
3300032041\|Ga0318549_10407531	Not Available	612	Open in IMG/M
3300032042\|Ga0318545_10061482	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300032043\|Ga0318556_10495071	Not Available	639	Open in IMG/M
3300032051\|Ga0318532_10037197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1643	Open in IMG/M
3300032059\|Ga0318533_10425109	Not Available	971	Open in IMG/M
3300032060\|Ga0318505_10437084	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300032065\|Ga0318513_10340008	Not Available	730	Open in IMG/M
3300032066\|Ga0318514_10612762	Not Available	579	Open in IMG/M
3300032076\|Ga0306924_10332830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1742	Open in IMG/M
3300032076\|Ga0306924_11046664	Not Available	893	Open in IMG/M
3300032076\|Ga0306924_11501489	Not Available	714	Open in IMG/M
3300032090\|Ga0318518_10642660	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032091\|Ga0318577_10153968	Not Available	1094	Open in IMG/M
3300032091\|Ga0318577_10409800	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300033289\|Ga0310914_10666094	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300033290\|Ga0318519_10210686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M
3300033290\|Ga0318519_11015312	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.67%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	81.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1010966482	3300005332	Tropical Forest Soil	MDPAPPSSVPPKVLESVGRYFGISDRVLDVLVPEVVLQGPGVMAIVREFEPTGMAKHVRVDGEWHLGGLPDTLDEAMEADGADRPTAFGNEHLGVSGVIAA*
Ga0066388_1030455432	3300005332	Tropical Forest Soil	VFKRVRRESPAAYVPPKVLEPVGRYVGVPDRVLDVLVPEVVLQRTCVVAVVGELEPTGMAQHVWVDRERHLGSLADALDETVEADWAENEDVGVFGIVAA*
Ga0066388_1035386492	3300005332	Tropical Forest Soil	MRCASRPEIRSAPPKVLEPVGRHFGVPDRVLNVLVAEVVLQGPRVVAIIGQFEPASMAKHVGVDREWHLGGLADALDEAVEPNGADRPAAFGNEHVSLSRVIAA*
Ga0066388_1048313981	3300005332	Tropical Forest Soil	MDPAPPSSVPPKILESVRRHFAVPDRVLNVLVPEVVLQGPGVMAIVREFEPTGMAQHVGVDREWHLGGLADALNEAVETDGADRSAALGNE
Ga0066388_1050346252	3300005332	Tropical Forest Soil	VLVPESSAPPSLVPPKVLEAVGRHFGVSDGVLDVLVSEVVLQGPRVVAIVGELEPARMAKHVRVDREWHLSGFPEALNEPVETDGTDWPAALGNEYVGVFGVIAA*
Ga0066388_1062832391	3300005332	Tropical Forest Soil	GLRSASPKVLEPVGRHLGVSDRVLNVLVPEVVLQGPRVVAVVGQLESTGMAKHVRVDREWHLGGLPDALDEAVETDGADWPAALGNEYVGVSRVIAS*
Ga0066905_1003534092	3300005713	Tropical Forest Soil	VDVARDLGAIRDFPLSVPPKLFEAVGRHVGVPDRVLNVLVAEVVLQGPRVVAVVGQLEPAGMAKHVRVDREWHLGGLPEALDEAVETDGTDWSAALGNEYVGVCRVIAA*
Ga0066905_1006806902	3300005713	Tropical Forest Soil	SVPPKVLEPVGRHIGVSDRVLDVLVPEVVLQGPRVVPIVGKLEATGMAKHVWVDWEWHLGGFPEALDEPVEAHWTDWPAALGNEHVRISGVIAA*
Ga0066905_1014964172	3300005713	Tropical Forest Soil	MRCASRPEVRSAPPKVLEPVGRHFGVAHRVLNVLVPEIVLQGPGVVAIIGELKTTGMAKHVRVDRERHLGGLTDALDEPVEADGTDWPTALGNEHVGIFRVITAQLAE
Ga0066903_1054772282	3300005764	Tropical Forest Soil	MDPAPPSSVPPKILESVGRHFGVPDRVLDVLVSKVVLQGARIVAVVRQLEPTGMAKHVRVDREWHVSGFPEALDKPMETDGTDWPAA
Ga0066903_1056428092	3300005764	Tropical Forest Soil	GARKRRHQDAQGLKSASPKVLEPVGRKLGVADRVLDVLVPEIVLQSPCVVAVVGKLEPTGMAQHVWVDREGHLGSLADALDEAVETDRAHWPPAFGNEDVSVPGVIAA*
Ga0066903_1088054981	3300005764	Tropical Forest Soil	MRCASRPEVRSAPPKVLEPIGRHFGVSDRMLDVLVPEVVLQGPCVVAIVGELESTGMAKHVWVDREWHVGGFPDALDEAVETNRAHWPAAL
Ga0066903_1089704071	3300005764	Tropical Forest Soil	RKRRHQDAQGLRSASPKVLEPVGRHVGVPDRVLDVLVPEVVLQGPRIVAVVGELEPTGMAQHVWVDRNWHLGGLPDALDEAVETDGTDWPTALGNEHVFGAGGMSRRKWL*
Ga0124844_11775691	3300010868	Tropical Forest Soil	MAKLVRLLGASTTLIPPKVLEPVGRHFGVPDRVLNVLVPEVVLQGARVVTIVGQLEPAGVAKHVRVDREWHLGDLAEALDEAMEADGADRPT
Ga0126375_106452322	3300012948	Tropical Forest Soil	VRDLVDVARDLGAIRDFPLSVPPKLFEAVGSHFRVPDCVLDVLVPEVVLQGPRVVAIVGELEPASMAKHVWVDREWHLGGLPDTLDEAMEADGADRPAAL
Ga0164308_117487512	3300012985	Soil	MSIPPKVLEPVGRHLGVPDGMLDVLVPEVVLQGPRVVAIVGEFEPASVTKHVGVDWEWHLGGLAEALDEAMETDGTPALGNEYVSFCGVIAP*
Ga0164305_110573451	3300012989	Soil	LSVPPKVFESVGRHFGVPDGVLNVLVAKVVLQGPRVVAIIGQLKPAGMAKHVRMDREWHLGGLADALDEPVETDGADWSAALGNDTWASVG*
Ga0164305_120701431	3300012989	Soil	VISVPPKILEAVGRHFCVADGVLDVFMTEIMLQGSCVVAVVCELEPTGMAKHVRVDWEWHLGGLAEALDEAMETDGAHWPAALRNEYVSIFRV
Ga0182036_101211115	3300016270	Soil	VQASVAPPKVLEPVGRHFGVPHGVLDVLVAEVVLQCPCIVAIGGELEPTGMAKHVRVDREWHLGGLPDTLDEAMEADGADWP
Ga0182041_107433181	3300016294	Soil	MGQAARTCRPPSSSSPPKVLEPVGRHFGVPDGVLNVLMAYIVLQGARVVAIVGQLEPAGVAKHLRVDVEWHLGGLPETLDEPVETDGTD
Ga0182041_112306501	3300016294	Soil	MDPAPPSSVPPKVLEAVGRHFGVSDGVLDVLVPEVVLQGARVVAIVSELEPAGMAEHVRVDREWHLGSLTEALDKPVETDGADWPAALGNEYVGV
Ga0182035_104392821	3300016341	Soil	LAPVDVLVRESSAPPWSVPPKVLEPVGRHFGVPDRVLNVLVPEVVLKGPRVVAIIGQLEPTGMAKHVRVDREWHVSGFPEALDEPVEADGADRSVALGNEYVGVWGNRVVVYAEPASRHRGSDVRWQSRS
Ga0182039_107231541	3300016422	Soil	PKVLEPVGRHFGVSDGVLNVLVPEVVLQNARVMAIIGQLEPTRMAKHVRVDREWHVSGFPEALDEAMEADGADWPAALGNEYVGVFGVIAA
Ga0182039_122546052	3300016422	Soil	RWASDWSSSSPKVLEPVGRHFRVPDGVLNVLVPEVVLEGARVVAIVGELEPTGMPKHVRMDWEWHLGGLPEPLDEPMESNGADWSAALGNEYVGVFGVIAS
Ga0066669_119314351	3300018482	Grasslands Soil	PEPSQSIAPQVLGPVGRQLGGPDRVLNVLVPEVALQGPRVVAIIRQLKPAGMAKHVRVDREWHLGGLPEALDEPVETDGADWSAALGNEYVGVCRVIAA
Ga0318534_103653601	3300031544	Soil	LAPVDVLVRESSAPPWSVPPKVLEPVGRHFGVPDRVLNVLVPEVVLQGPRVVAIIGQLEPAGMAEHVRVNRERHVSGLPEALDEPVETDGTDWPAALGNEHVGVLRVIAS
Ga0318534_108604181	3300031544	Soil	MDPAPPSSVPPKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWHLGGLPEALDKPVETDGADWPAAL
Ga0318541_103064101	3300031545	Soil	MDPAPPSSVPPKILESVGRHFGVPDGVLDVLVSEVVLQGPRVVAIIGQLEPAGMAKHVRVDREWHLGGLPEALDEAMEADGADRPTA
Ga0318541_108392881	3300031545	Soil	SQEWAARSRRELVPPKVLEAVGRHFGVPDRVLNVLVPELVLQGPRVVAIVGELEPTGMAKHVWVDREWHLGRIAEALDEAVEPNGADRPTALGNKYVGLVRVLAT
Ga0318528_100851762	3300031561	Soil	MDPAPPSSVPPKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWQLGGLPEALDKPVETDGADWPAALGNEYLSVSRVIVA
Ga0318573_101451521	3300031564	Soil	LAPVDVLVRESSAPPWSVPPKVLEPVGRHFGVPDRVLNVLVPEVVLKGPRVVAIIGQLEPTGMAKHVRVDREWHVSGFPEALDEPVEADGTDWPAALGNEHVGVLRVIAS
Ga0310915_101068534	3300031573	Soil	MDPAPPSSVPPKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWQLGGLPEALDKPVETDGADWPAALGNEYLSVS
Ga0310915_101418541	3300031573	Soil	VQASVAPPKVLEPVGRHFGVPHGVLDVLVAEVVLQCPCIVAIGGELEPTGMAKHVRVDREWHLGGLPDTLDEAMEADGADWPAALGNEYVGVSR
Ga0310915_101532463	3300031573	Soil	MDPAPPSSVPPKILESVGRHFGVPDGVLDVLVSEVVLQGPRVVAIIGQLEPAGMAKHVRVDREWHLGGLPEALDEAMEADGADRPTAFGNKHVSLS
Ga0318561_102300901	3300031679	Soil	MWAARSRRELVPPKVLEAVGRHFGVPDRVLNVLVPEVVLQGPRVVAIVGELPTGMAKHVWVDREWHLGRIAEALDEAVEPNGADRPTALGNKY
Ga0318574_103468503	3300031680	Soil	VQASVAPPKVLEAVGCHFGVPDRVVDVLVAEVVLQGPRVVAIVSELEPTGMAKHVRVDWEWHLGGFPEALDKPVEADRADRSAALGNEYVGIFGVLAS
Ga0318572_101795631	3300031681	Soil	MDPAPPSSVPPKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWQLGGLPEALDKPVETDGADWPAALGNEYLSVSR
Ga0318572_104056612	3300031681	Soil	CGAMDPAPPSSVPPKVLESVGRHFGVPDRVLDVLVPEVVLQGPGVVAIVREFEPTGMAKHVRADGEWHLGSLTEALDKPVETDWPAALGNEYVSVSRVIAA
Ga0318496_105195161	3300031713	Soil	SPAPSSSVPPKVLETVGRHVGVPDGVLDVLVPKVALQGPRVVAIIGQLEPAGMAKHVRVDREWHLGDLPEALDESVETDGTDWSAALGNEYVGVSRVIAA
Ga0318502_101938474	3300031747	Soil	VQASVAPPKVLEPVGRHFGVPHGVLDVLVAEVVLQCPCIVAIGGEFEPTGMAKHVRMDGEWHLGGLPEALDEPVETDGTDWPTALGNEYVGVC
Ga0318502_105442271	3300031747	Soil	WPLSIPPKVLEPVGRHFGVSDGVLNVLVPEVVLQNARVMAIIGQLEPTRMAKHVRVDREWHVSGFPEALDEAMEADGADWPAALGNEYVGVFGVIAA
Ga0318502_107684332	3300031747	Soil	MQITPISRTVGQDRVRVPPSSVPLKVFEPVGRHFGVPDGVLNVLVPEVLLQGPRVVAIICELEPAGMAKHVRVDGEWHLGGLPDTLDEAMEADGADWPAALGNEYVGVSR
Ga0318494_101313713	3300031751	Soil	MAAKQTSVASPEILESVGRDFGVPDRVLNVLVPEVVLQRPRVVAIVGELEPAGMAKHVRVDGEWHFGRLAEALDEAVEPDGADWPTALGNEYVGVFG
Ga0318494_103773073	3300031751	Soil	LRWTSDWSSSSPKVLEPIGRHFGVSDRVLDVLVPEVVLQGPGVMAIVRELEPAGMAKHVRVDREWHLGGLPQSLDKPVETDGADWSAAL
Ga0318494_107874732	3300031751	Soil	IWRVVFFEREDLPCGAMDPAPSSSVPPKVLEAVGRHFGIPDRVLNVLVPKVVLQGPRVVAIVGQLEPAGMAKHVRVDREWHLGGLPEALDEPVETDGTD
Ga0318554_103578893	3300031765	Soil	LRWTSDWSSSSPKVLEPIGRHFGVSDRVLDVLVPEVVLQGPGVMAIVRELEPAGMAKHVRVDREWHVSGFPEALDEPVETDGTDWPAALGNEY
Ga0318509_100999483	3300031768	Soil	MWAARSRRELVPPKVLEAVGRHFGVPDRVLNVLVPELVLQGPRVVAIVGELEPTGMAKHVWVDREWHLGRIAEALDEAVEPNGADRPTALGNKYVGLVRVLAT
Ga0318498_102404493	3300031778	Soil	MGADQRVVFEREDLPCGVMNPAPLSSVPPKILESVGRHFGVPDGVLDVLVPEVMLQGPRVVAVVGQLEPTGMAQHVRVDREWHLGGLPEALDEPVEA
Ga0318508_10892923	3300031780	Soil	LRWTSDWSSSSPKVLEPIGRHFGVSDRVLDVLVPEVVLQGARVVAIVGELEPTGMAKHVWVDREWHLGGLPEALDEPMESNGADWPAALGNEYVGVSRV
Ga0318547_101278221	3300031781	Soil	VQASVAPPKVLEPVGRHFGVPHGVLDVLVAEVVLQCPCIVAIGGEFEPTGMAKHVRMDGEWHLGGLPEALDEPVETDGTDWP
Ga0318547_104770622	3300031781	Soil	DSTPPKVLEPVGRHFGVPDGVLDVLVPEVVLQGPRVVSIVRELESTGMAKHVWVDREWHVGGFPDALDEAVETDGAHWPAALGNEYVGVLRVLAS
Ga0318552_100468552	3300031782	Soil	MDPAPPSSVPPKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWHLGGLPEALDKPVETDGADWPAALGNEYLSVSRVIVA
Ga0318529_101425553	3300031792	Soil	MDPAPPSSVPPKILESVGRHFGVPDGVLDVLVSEVVLQGPRVVAIIGQLEPAGMAKHVRVDREWHLGGLPEALDEAMEADGADRPTAFGNKHVSLSR
Ga0318548_100767063	3300031793	Soil	IFLCGAMDPAPPSSVPPKILESVGRHFGVSDGVLNVLVPEVMLQGPRVVAVVGQLEPAGMAKHVRVDREWHLGGLPEALDETVEADGTDWPAALGNEYVDVSRVIAA
Ga0318548_103543511	3300031793	Soil	VQASVAPPKVLEAVGCHFGVPDRVVDVLVAEVVLQGPRVVAIVSELEPTGMAKHVRVDWEWHLGGFPEALDKPVEVDRSAALGNEYVG
Ga0318503_101112562	3300031794	Soil	VRRDGSCPPSSVPPKILESVGRQFGVPDRVLDVLVSEVVLQGPRVVAIIGQLEPTGMAKHVWVDREWHLGGLAEALDEPVETDGADVLRV
Ga0318497_102890621	3300031805	Soil	MDPAPPSSVPPKILESVGRHFGVPDGVLDVLVSEVVLQGPRVVAIIGQLEPAGMAKHVRVDREWHLGGLPEALDEAMEADGADRPTALGHEYVG
Ga0318499_102265472	3300031832	Soil	LRPTSRWASDWSSSSPKVLEPVGRHFGVSDGVLDVLVPEVVLQGPRVVAIIGQLEPTGMPKHVRVDGEWHLGGLPDSLDEAMEADGADRPTALGNEYVGVSGVIAA
Ga0318512_102294621	3300031846	Soil	PKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWQLGGLPEALDKPVETDGADWPAALGNEYLSVSRVIVA
Ga0306919_104937781	3300031879	Soil	VPPKVLEPVGRHFGVSDGVLNVLVPEVMLQGPRVVAIVRELEPTGVAKHVRVDGEWHLGDLADALDESVEADGTDWPAALGNEHISLSRVIAP
Ga0306919_105991251	3300031879	Soil	MWAARSRRELVPPKVVEPVGRHFGVPDRVLNVLVTEVVLQGPRVVAIVGELEPAVMANHVRVDREWHLGGLPEALDEAMETDGTDWPAALGNEYVGVRRVIAA
Ga0306925_100797485	3300031890	Soil	MDPAPPSSVPPKVLESVGRHFGVPDRVLDVLVAKVVLQGPRVVAIVGELEPTGMAQHVRVDREWHLGGLPDTLDEAMEADGADWPAALG
Ga0306925_104746683	3300031890	Soil	GASVPPKVFESVGRQFGVPDGVLNVFVAQVVLEGPRVVAIVGELEPTGMAEHVRVDREWHLGGLPEALDEAVEPNGADRPTALGNEHMGVSRVIAA
Ga0306925_108432552	3300031890	Soil	MWAARSRRELVPPKVLEAVGRHFGVPDRVLNVLVPEVVLQGPRVVAIVGELPTGMAKHVWVDREWHLGRIAEALDEAVEPNGADRPTALGNKYVGLVRVLAT
Ga0306925_110311023	3300031890	Soil	LRWTSDWSSSSPKVLEPIGRHFGVSDRVLDVLVPEVVLQGPGVMAIVRELEPAGMAKHVRVDREWHLGGLPQSLDKPVETDGADWSAALGNEYV
Ga0306925_118925401	3300031890	Soil	VARWILPRHRQPLQKILESVGRHFGVPDGVLNVLVAEVVLQGPRVAAIVRELEPTGVAKHVRVDGEWHLGGLPDTLDEAMEADGADRPTAFGNEHVSLSRVIAA
Ga0306923_108741273	3300031910	Soil	MDPAPPSSVPPKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWQLGGLPEALDKPERM
Ga0306921_107093671	3300031912	Soil	VGRHFGVSDGVLNVLVPEVMLQGPRVVAIVRELEPTGVAKHVRVDGEWHLGDLADALDESVEADGTDWPAALGNEHISLSRVIAP
Ga0306921_107243411	3300031912	Soil	MDPALPSSVPPKVLEPIGCHVGVPDRVLNVLVAEVVLKGPRVVAIVGQLEPARMAKHVRVDGEWQLGGLPETLDKPVETDGADWPAALGNEYVGVCRVIAA
Ga0306921_114255952	3300031912	Soil	PSSAPPKVLEPVGRHVGVPDRVLNVLVPEVVLQGPRVVAIVGQLEPTGMAKHVRVDREWHLGGLAESLDEAVEPDGADWSAAFGNEYVGVLRVLAS
Ga0310912_109412072	3300031941	Soil	KVLEPVRRHLGVSDRVLDVLMPEVVLQGARVVAIVGELEATGVAKHVRVDREWHLGGLPDTLNEAMEADGADRPTALRNET
Ga0310910_103155001	3300031946	Soil	MWMARSRRELVPPKVLEAVGRHFGVPDRVLNVLVPEVVLQGPRVMAIVSELEPTSMAKHVRVNREWHLGGLPEALDEAVETDGADWSAALGNEYVGVFRVIAT
Ga0310910_115394161	3300031946	Soil	RESGHSGSIPPKVLEPVRRHLGVSDRVLDVLMPEVVLQGARVVAIVGELEATGVAKHVRVDREWHLGGLPDTLNEAMEADGADRPTALRNET
Ga0310909_101099041	3300031947	Soil	MWAARSRRELVPPKVLEPVGRHFGVPDRVLDVLVPEVVLQGPRVVAISGQLEPTGMAKHVRVNREWHLGGFADALNEAVETDRTDGPAALGNEYVGVFRV
Ga0310909_103993691	3300031947	Soil	MWAARSRRELVPPKVVEPVGRHFGVPDRVLNVLVTEVVLQGPRVVAIVGELEPAVMANHVRVDREWHLGGLPEALDEAMETDGLIG
Ga0306926_106748394	3300031954	Soil	VQASVAPPKVLEPVGRHFGVPHGVLDVLVAEVVLQCPCIVAIGGELEPTGMAKHVRVDREWHLGGLPDTLDEAMEADGADWPAALGNEYVGVSRVIA
Ga0306926_117502431	3300031954	Soil	PPKVLETVGRHVGVPDGVLDVLVPKVALQGPRVVAIIGQLEPAGMAKHVRVDREWHLGDLPEALDESVETDGTDWSAALGNEYVGVSRVIAA
Ga0306926_119912361	3300031954	Soil	RRQLAPKILEAIRCHFGVAHRVLDVLVPEVVLQRPRVVAIIGELEPTGMAKHVRVDREWHLGGLADALDEAMEADGAHRAASLGNEYVGIFEVVAGVAYA
Ga0306926_125350281	3300031954	Soil	VGRHFGVPDGVLDVLVAEVVLQGPGVMAIVGELEPAGVAKHVRVDRKWHLGSLTEALDKPVETDGADRPTAFGNEHVSLSRVIAA
Ga0318530_100565031	3300031959	Soil	MRCASRLEIRSAPPKVLEPVGRHFGVSDRVLDVLVPEVVLQGPGVMAIVREFEPTGMAQHVGVDREWHLGGLADALNEAVETDGADRSAALGNEY
Ga0318531_100579605	3300031981	Soil	VQASVAPPKVLEPVGRHFGVPHGVLDVLVAEVVLQCPCIVAIGGEFEPTGMAKHVRMDGEWHLGGLPEALDEPVETDGTDWPTALGNEYVGVCR
Ga0306922_100831367	3300032001	Soil	SRRELVPPKVLEAVGRHFGIPDRVLNVLVPKVVLQGPRVVAIVGQLEPAGMAKHVRVDREWHLGGLPEALDEPVETDGTDWPPALENEHVGVCGVIAA
Ga0306922_104315001	3300032001	Soil	VWREDPAPPSSVPPKVLESVRRHFGVSDRVLNVLVPEVVLQGPRVVAVVGQLEPTGMAKHVRVDREWHLGGLPDTLDEAMEADGADWPAALG
Ga0306922_112078631	3300032001	Soil	KHPESSVPPKVFEAVGRQFGIPDRVLDVLVAKVVLQGPRVVAIICELEPTGMAQHVGVDREWHLGGLPEALDESMETDGTDGPAALGNEYVGVSRVIAP
Ga0318507_100178311	3300032025	Soil	MRCASRLEIRSAPPKVLEPVGRHFGVSDRVLDVLVPEVVLQGPGVMAIVREFEPTGMAQHVGVDREWHLGGLPEALDETVEADG
Ga0318507_101915641	3300032025	Soil	LAPVDVLVRESSAPPWSVPPKVLEPVGRHFGVPDRVLNVLVPEVVLKGPRVVAIIGQLEPTGMAKHVRVDREWHVSGFPEALDEPVEADGTDWPAALGNERVGVLRVIAS
Ga0318559_101429622	3300032039	Soil	MWAARSRRELVPPKVLEAVGRHFGVPDRVVNVLVPEVVLQGPRVMAIVSELEPTSMAKHVRVNREWHLGGLPEALDEAVETDGADWSAALGNEYVGVFRVIAT
Ga0318549_104075312	3300032041	Soil	MRCASRLEIRSAPPKVLEPVGRHFGVSDRVLDVLVPEVVLQGPGVMAIVREFEPTGMAQHVGVDREWHLGGLPEALDEPVEADGADWSAALGDEYVGVLRVLA
Ga0318545_100614821	3300032042	Soil	MDPAPPSSVPPKVLESVGCHFGVPDRVLDVLVAKVVLQGSRIVTIIGQLEPARMAKHVRVDGEWQLGGLPEALDEAMEADGAD
Ga0318556_104950712	3300032043	Soil	VWREDPAPPSSVPPKVLESVRRHFGVSDRVLNVLVPEVVLQGPRVVAVVGQLEPTGMAKHVRVDREWHLGGLAEALDKPVETDGADWPAALRNEY
Ga0318532_100371973	3300032051	Soil	VGRHFGVPDRVLDVLVPEVMLQGPRVVAIVRELEPTGMAKHVRVDGEWQLGGLPEALDKPVETDGADWPAALGNEYLSVSRVIVA
Ga0318533_104251092	3300032059	Soil	MADMRLATLSPSKSLEPVGRHFGVPDRVLNVLVPEVALQGPRVVAIVGELEPAGVAKHVRVDRKWHVSGFPEPLNEPVETNGTDWPAALGNEHVGVSRVIAA
Ga0318505_104370841	3300032060	Soil	LAPVDVLVRESSAPPWSVPPKVLEPVGRHFGVPDRVLNVLVPEVVLKGPRVVAIIGQLEPTGMAKHVRVDREWHVSGFPEALDEPVEADGADRSVALGNEYVGVSGVIAS
Ga0318513_103400081	3300032065	Soil	VQASVAPPKVLEAVGCHFGVPDRVVDVLVAEVVLQGPRVVAIVSELEPTGMAKHVRVDWEWHLGGFPEALDKPVEADRADRSAALGNEYVGIFG
Ga0318514_106127622	3300032066	Soil	MRCASRLEIRSAPPKVLEPVGRHFGVSDRVLDVLVPEVVLQGPGVMAIVREFEPTGMAQHVGVDREWHLGGLPEALDETVEADGTDW
Ga0306924_103328305	3300032076	Soil	MRCASRLEIRSAPPKVLEPVGRHFGVSDRVLDVLVPEVVLQGPGVMAIVREFEPTGMAQHVGVDREWHLGGLPEALDEPVEADGADWSAALGDEYVG
Ga0306924_110466641	3300032076	Soil	MLRSASPKVLEPVGRHFAVPDRVLDVLVPEVMLQGPRVVAIVGELESAGMAKHVWVDREWHLGSLADALDEAVETDRAHWPPAFGNEDVSVPGVIA
Ga0306924_115014892	3300032076	Soil	MDPAPPSSVPPKVLEAVGRHFGVSDGVLDVLVPEVVLQGARVVAIVSELEPAGMAEHVRVDREWHLGSLTEALDKPVETDGADWPAALGNEYVGVSR
Ga0306924_115896573	3300032076	Soil	RHQDAQGLRSASPKVLEPVRRHFGVPDRVLDVPVPEVVLQGPRVVAIIGELKTTGMAQHVWVDRERHLGGFAEALNEMMEAGWAYWSATLGNKYVGIFEVVAA
Ga0318518_106426601	3300032090	Soil	LEAVGRHFGVPDCVLDVLVPEVVLQGSRVVAIIGELEPAGMAKHVWVDREWHLGGLPDTLDEAVETDGADWSAALGNEYVGVSRVIAA
Ga0318577_101539683	3300032091	Soil	LRWTSDWSSSSPKVLEPIGRHFGVSDRVLDVLVPEVVLQGPGVMAIVRELEPAGMAKHVRVDREWHVSGFPEALDEPVETDGTDWPAALGNEYVG
Ga0318577_104098002	3300032091	Soil	GWPLSIPPKVLEPVGRHFGVSDGVLNVLVPEVVLQNARVMAIIGQLEPTRMAKHVRVDREWHVSGFPEALDEAMEADGADWPAALGNEYVGVFGVIAA
Ga0310914_106660942	3300033289	Soil	LEPVGRHFGVSDGVLNVLVPEVMLQGPRVVAIVRELEPTGVAKHVRVDGEWHLGDLADALDESVEADGTDWPAALGNEHISLSRVIAP
Ga0318519_102106862	3300033290	Soil	MAAKQTSVASPEILESVGRDFGVPDRVLNVLVPEVVLQRPRVVAIVGELEPAGMAKHVRVDGEWHLGRLAEALDEAVEPDGADWPTALGNEYVGVFG
Ga0318519_110153122	3300033290	Soil	MDPALPSSVPPKVLEPIGCHVGVPDRVLNVLVAEVVLKGPRVVAIVGQLEPARMAKHVRVDGEWQLGGLPETLDKPVETDGADWPAALGNEYVGVCR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094680

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences