Metagenome Family F094705

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094705
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	45 residues
Representative Sequence	LRGPFTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Number of Associated Samples	65
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.24 %
% of genes from short scaffolds (< 2000 bps)	98.10 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (58.095 % of family members)
Environment Ontology (ENVO)	Unclassified (86.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (58.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.14% β-sheet: 0.00% Coil/Unstructured: 69.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13460	NAD_binding_10	15.24
PF04430	DUF498	5.71
PF02357	NusG	4.76
PF00296	Bac_luciferase	3.81
PF09351	DUF1993	2.86
PF13378	MR_MLE_C	2.86
PF03401	TctC	1.90
PF00072	Response_reg	1.90
PF03928	HbpS-like	1.90
PF00313	CSD	0.95
PF04392	ABC_sub_bind	0.95
PF04909	Amidohydro_2	0.95
PF00561	Abhydrolase_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	5.71
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	5.71
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	4.76
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.81
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.43 %
Unclassified	root	N/A	48.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.43 %
Unclassified	root	N/A	48.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.43 %
Unclassified	root	N/A	48.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.14 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.48 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	17.14 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	9.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.57 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	9.52 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	4.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.86 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	9.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.86 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	9.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.81 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.90 %
Rhodobacteraceae bacterium HIMB11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	0.95 %
Bradyrhizobium barranii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	13.33 %
bacterium MnTg02	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	9.52 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3.81 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.90 %
Bradyrhizobium barranii subsp. barranii	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	0.95 %
Rhodobacteraceae bacterium HIMB11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_103192971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	837	Open in IMG/M
3300005332\|Ga0066388_107071866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300005467\|Ga0070706_101599203	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005764\|Ga0066903_104300087	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300005764\|Ga0066903_105175366	Not Available	690	Open in IMG/M
3300005764\|Ga0066903_106532660	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_107143343	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300010043\|Ga0126380_10202490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1331	Open in IMG/M
3300010047\|Ga0126382_10684615	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300010048\|Ga0126373_11531841	Not Available	732	Open in IMG/M
3300010358\|Ga0126370_11674745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium barranii → Bradyrhizobium barranii subsp. barranii	611	Open in IMG/M
3300010361\|Ga0126378_10630730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1185	Open in IMG/M
3300010398\|Ga0126383_10252573	Not Available	1731	Open in IMG/M
3300016270\|Ga0182036_10964603	Not Available	701	Open in IMG/M
3300016270\|Ga0182036_11577428	Not Available	552	Open in IMG/M
3300016294\|Ga0182041_10634584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	942	Open in IMG/M
3300016294\|Ga0182041_10934150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	781	Open in IMG/M
3300016294\|Ga0182041_11963389	Not Available	544	Open in IMG/M
3300016294\|Ga0182041_12206892	Not Available	514	Open in IMG/M
3300016341\|Ga0182035_11518662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300016357\|Ga0182032_11608719	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	565	Open in IMG/M
3300016371\|Ga0182034_11186895	Not Available	663	Open in IMG/M
3300016371\|Ga0182034_11728111	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	551	Open in IMG/M
3300016387\|Ga0182040_10923298	Not Available	725	Open in IMG/M
3300016387\|Ga0182040_11416215	Not Available	589	Open in IMG/M
3300016404\|Ga0182037_10462289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1057	Open in IMG/M
3300016404\|Ga0182037_10749904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	839	Open in IMG/M
3300016404\|Ga0182037_11318422	Not Available	637	Open in IMG/M
3300016422\|Ga0182039_11183575	Not Available	690	Open in IMG/M
3300016422\|Ga0182039_11335791	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	650	Open in IMG/M
3300016422\|Ga0182039_11472214	Not Available	620	Open in IMG/M
3300016445\|Ga0182038_10642891	Not Available	919	Open in IMG/M
3300016445\|Ga0182038_11675033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	573	Open in IMG/M
3300021560\|Ga0126371_11744815	Not Available	745	Open in IMG/M
3300031546\|Ga0318538_10247916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	956	Open in IMG/M
3300031549\|Ga0318571_10412694	Not Available	529	Open in IMG/M
3300031564\|Ga0318573_10349928	Not Available	793	Open in IMG/M
3300031572\|Ga0318515_10376136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	761	Open in IMG/M
3300031573\|Ga0310915_10313930	Not Available	1108	Open in IMG/M
3300031573\|Ga0310915_10346641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300031640\|Ga0318555_10117830	Not Available	1409	Open in IMG/M
3300031640\|Ga0318555_10603803	Not Available	594	Open in IMG/M
3300031668\|Ga0318542_10465196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300031681\|Ga0318572_10374362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	846	Open in IMG/M
3300031681\|Ga0318572_10539660	Not Available	695	Open in IMG/M
3300031681\|Ga0318572_10759837	Not Available	577	Open in IMG/M
3300031681\|Ga0318572_10785156	Not Available	566	Open in IMG/M
3300031682\|Ga0318560_10207629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1047	Open in IMG/M
3300031744\|Ga0306918_10774950	Not Available	749	Open in IMG/M
3300031764\|Ga0318535_10459395	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	567	Open in IMG/M
3300031768\|Ga0318509_10096659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1587	Open in IMG/M
3300031768\|Ga0318509_10530194	Not Available	657	Open in IMG/M
3300031771\|Ga0318546_10259535	Not Available	1197	Open in IMG/M
3300031780\|Ga0318508_1188922	Not Available	589	Open in IMG/M
3300031782\|Ga0318552_10607535	Not Available	558	Open in IMG/M
3300031797\|Ga0318550_10190788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300031798\|Ga0318523_10424882	Not Available	660	Open in IMG/M
3300031821\|Ga0318567_10034164	All Organisms → cellular organisms → Bacteria → Proteobacteria	2552	Open in IMG/M
3300031833\|Ga0310917_10310468	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300031833\|Ga0310917_10555437	Not Available	780	Open in IMG/M
3300031835\|Ga0318517_10143389	Not Available	1065	Open in IMG/M
3300031845\|Ga0318511_10613336	Not Available	508	Open in IMG/M
3300031890\|Ga0306925_10972520	Not Available	868	Open in IMG/M
3300031890\|Ga0306925_11111250	Not Available	798	Open in IMG/M
3300031893\|Ga0318536_10672211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300031897\|Ga0318520_10116151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1519	Open in IMG/M
3300031897\|Ga0318520_10643778	Not Available	660	Open in IMG/M
3300031912\|Ga0306921_12241624	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031941\|Ga0310912_10316873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1208	Open in IMG/M
3300031941\|Ga0310912_11084008	Not Available	612	Open in IMG/M
3300031942\|Ga0310916_10255975	All Organisms → cellular organisms → Bacteria → Proteobacteria	1476	Open in IMG/M
3300031942\|Ga0310916_10440506	Not Available	1109	Open in IMG/M
3300031942\|Ga0310916_10443491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300031945\|Ga0310913_11165874	Not Available	537	Open in IMG/M
3300031946\|Ga0310910_11154128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300031946\|Ga0310910_11526561	Not Available	512	Open in IMG/M
3300031947\|Ga0310909_11265423	Not Available	594	Open in IMG/M
3300031981\|Ga0318531_10036064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2051	Open in IMG/M
3300031981\|Ga0318531_10059917	All Organisms → cellular organisms → Bacteria → Proteobacteria	1631	Open in IMG/M
3300032001\|Ga0306922_11918430	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	579	Open in IMG/M
3300032009\|Ga0318563_10728020	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	532	Open in IMG/M
3300032010\|Ga0318569_10610467	Not Available	508	Open in IMG/M
3300032025\|Ga0318507_10524830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	515	Open in IMG/M
3300032035\|Ga0310911_10725198	Not Available	575	Open in IMG/M
3300032035\|Ga0310911_10732145	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	572	Open in IMG/M
3300032039\|Ga0318559_10475422	Not Available	583	Open in IMG/M
3300032041\|Ga0318549_10487668	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	554	Open in IMG/M
3300032042\|Ga0318545_10181779	Not Available	751	Open in IMG/M
3300032042\|Ga0318545_10247454	Not Available	640	Open in IMG/M
3300032054\|Ga0318570_10157721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1017	Open in IMG/M
3300032055\|Ga0318575_10082839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300032059\|Ga0318533_10278618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1210	Open in IMG/M
3300032059\|Ga0318533_10694824	Not Available	746	Open in IMG/M
3300032059\|Ga0318533_11288979	Not Available	534	Open in IMG/M
3300032066\|Ga0318514_10496200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	649	Open in IMG/M
3300032066\|Ga0318514_10559183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	609	Open in IMG/M
3300032090\|Ga0318518_10390298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	714	Open in IMG/M
3300032261\|Ga0306920_101127478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1136	Open in IMG/M
3300032261\|Ga0306920_101516488	Not Available	956	Open in IMG/M
3300032261\|Ga0306920_102680664	Not Available	681	Open in IMG/M
3300032261\|Ga0306920_103169310	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300032261\|Ga0306920_104280268	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	513	Open in IMG/M
3300033290\|Ga0318519_10344653	Not Available	879	Open in IMG/M
3300033290\|Ga0318519_10574623	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300033290\|Ga0318519_10712221	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium MnTg02	614	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.33%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	86.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	58.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1031929711	3300005332	Tropical Forest Soil	MILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR*
Ga0066388_1070718661	3300005332	Tropical Forest Soil	GPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIDVVR*
Ga0070706_1015992031	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRILRGPFTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDLEVVR*
Ga0066903_1043000872	3300005764	Tropical Forest Soil	GHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDVEVVR*
Ga0066903_1051753661	3300005764	Tropical Forest Soil	AIFADMRPRQRVEILLQLLGGEQRVTLAKKDIQVVR*
Ga0066903_1065326601	3300005764	Tropical Forest Soil	HLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR*
Ga0066903_1071433431	3300005764	Tropical Forest Soil	FADMRPRQRVEILLQLLGGEQRVTLAQKDIEVVR*
Ga0126380_102024903	3300010043	Tropical Forest Soil	YLAIFADMKPRERVEILLQLLGGRQRVELAKGDIEAV*
Ga0126382_106846151	3300010047	Tropical Forest Soil	QVRVVGGVFRDHLGVYAGMKPRQRVEILLQLLGGQQKVMLAQQDIEAVR*
Ga0126373_115318412	3300010048	Tropical Forest Soil	PLRRGARVRILRGPFTGHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR*
Ga0126370_116747452	3300010358	Tropical Forest Soil	PFTGHLAIFADMKPRERVEILLQLLGGEQRVTLSKGDVAAV*
Ga0126378_106307303	3300010361	Tropical Forest Soil	LAIFADKPRERVEILLQLLGGEQRVTLPKDAVEVVR*
Ga0126383_102525731	3300010398	Tropical Forest Soil	DHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR*
Ga0182036_109646031	3300016270	Soil	RVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLATKDIEVVR
Ga0182036_115774282	3300016270	Soil	GDQVRILQGPFAGHLALYAGMRPRERVEILLQLLGGEQRVTLAKNVIEVVRP
Ga0182041_106345843	3300016294	Soil	VRILHGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0182041_109341502	3300016294	Soil	IFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0182041_119633891	3300016294	Soil	FTGHLAIFADTRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0182041_122068923	3300016294	Soil	GHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDVEVVR
Ga0182035_115186622	3300016341	Soil	FRKLLSGPFTGHLAIFADMRPRQRVEILLQLLGGVQRVTLAKKDIEVVR
Ga0182032_116087191	3300016357	Soil	TGHLAIFADMKPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0182034_111868952	3300016371	Soil	LRGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0182034_117281112	3300016371	Soil	LAIFADMRPRQRVEILLQLLGGEQRVTLARKDIEVVR
Ga0182040_109232981	3300016387	Soil	AIFADMKPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0182040_114162151	3300016387	Soil	EEFQIGDQVRILQGPFAGHLALYAGMRPRERVEILLQLLGGEQRVTKNDIEVVRP
Ga0182037_104622891	3300016404	Soil	TGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0182037_107499041	3300016404	Soil	DQVRVVGGVFRDHLGVYAGMKPRQRVEILLQLLGGQQKVMLAQQDIEAVR
Ga0182037_113184221	3300016404	Soil	VRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLANKDIEVVR
Ga0182039_111835753	3300016422	Soil	NHLAIFADMKPRERVEVLLQLLGSLQKVELARASIEAARL
Ga0182039_113357912	3300016422	Soil	RGARVRILRGPFTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDIKVVR
Ga0182039_114722141	3300016422	Soil	FTGHLAIFADMRPRQRVEILLQLLGGEQRVTLANKDIEVVR
Ga0182038_106428912	3300016445	Soil	FTGHLAIFADMRPRQRVEILLQLLGGEQRVTLARKDIEVVR
Ga0182038_116750331	3300016445	Soil	AIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0126371_117448151	3300021560	Tropical Forest Soil	VRILYGPFTGHLAIFADMKPRQRVEILLQLLGGEQKVTLARQDIEVVR
Ga0318538_102479161	3300031546	Soil	LAVFADMKPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318571_104126942	3300031549	Soil	RGPFTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318573_103499282	3300031564	Soil	ILRGPFTDHLAIFADMRPRERVEILLQLLGGQQKVMLAQQDIEAVR
Ga0318515_103761361	3300031572	Soil	GVRVRILRGPFSGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0310915_103139303	3300031573	Soil	RGARVRILHGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVDLPKADIEAVRS
Ga0310915_103466412	3300031573	Soil	IFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0318555_101178302	3300031640	Soil	PFTGHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318555_106038031	3300031640	Soil	ILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLANKDIEVVR
Ga0318542_104651961	3300031668	Soil	AIFADMKPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318572_103743621	3300031681	Soil	VRILYGPFTGHLAIFADMKPRQRVEVLLQLLGGVQRVTLAKKDIEVVR
Ga0318572_105396602	3300031681	Soil	LAGPFAGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318572_107598371	3300031681	Soil	VRILQGPFAGHLAIFADMKPHQRVEILLQLLGGEQSVELARTDIEVISA
Ga0318572_107851561	3300031681	Soil	LRGPFTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318560_102076291	3300031682	Soil	RVRILRGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0306918_107749501	3300031744	Soil	ILSGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318535_104593952	3300031764	Soil	VRILRGPFTDHLAIFADMRPRERVEILLQLLGGEQRVTLAKKEIEVVR
Ga0318509_100966591	3300031768	Soil	PFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0318509_105301941	3300031768	Soil	GARVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGVQRVTLAKKDIEVVR
Ga0318546_102595353	3300031771	Soil	VIFADMKPRERIEVLLQLLGSLQRVELARDTVEIVRS
Ga0318508_11889221	3300031780	Soil	AGPLRRGARVRILRGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0318552_106075351	3300031782	Soil	LRGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAMRP
Ga0318550_101907883	3300031797	Soil	GARVRILRGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0318523_104248821	3300031798	Soil	LRGPFSGHLAIFADMKPRERVEILLQLLGGVQRVTLAKKDIEVVR
Ga0318567_100341644	3300031821	Soil	ARVRILRGPFTGHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0310917_103104681	3300031833	Soil	GGVFRDHFGVYAGMKPRQRVEILLQLLGGQQKVMLAQQDIEAVR
Ga0310917_105554372	3300031833	Soil	LAVYADMKPRQRVEILLQLLGAEQRVELAKGDIEAV
Ga0318517_101433892	3300031835	Soil	VMILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318511_106133361	3300031845	Soil	HLAVYADMKPRERVEILLQLLGGEQKVTLAKKHIEVVR
Ga0306925_109725201	3300031890	Soil	TGHLAIFADMRPRQRVEILLQLLGGEQRVTLATKDIEVVR
Ga0306925_111112502	3300031890	Soil	IFADMRPRQRVEILLQLLGGEQRVTLAKNDIEVVRP
Ga0318536_106722111	3300031893	Soil	HLAIFADMRPRQRVEILLQLLGGEQRVTLATKDLEVVR
Ga0318520_101161512	3300031897	Soil	RGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0318520_106437781	3300031897	Soil	ILYGPFTGHLAIFADMKPRQRVEVLLQLLGGVQRVTLAKKDIEVVR
Ga0306921_122416241	3300031912	Soil	GARVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0310912_103168732	3300031941	Soil	PLRRGARVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0310912_110840081	3300031941	Soil	GARVRILRGPFTGHLAIFADMRPRERAEILLQLLGGEQRVTLAKKDIEVVR
Ga0310916_102559751	3300031942	Soil	NGHVGLFAGMRPRQRVEILLQLLGSVQRVTLAESDLEALHS
Ga0310916_104405062	3300031942	Soil	LRRGARVRILRGPFTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0310916_104434911	3300031942	Soil	PLRRGARVRILRGPFTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKNDIEVVRP
Ga0310913_111658743	3300031945	Soil	VLRGPFSGHLAIFADMRPRERVEIPLHLLGGEQKVELAKNDVEVIH
Ga0310910_111541283	3300031946	Soil	APSLQLRRGARVRILRGPFTGHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0310910_115265611	3300031946	Soil	GPFTGHLAIFADMKPRERVEILLQLLGAEQRVELAKGDVEAV
Ga0310909_112654231	3300031947	Soil	LRRGARVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLANKDIEVVR
Ga0318531_100360644	3300031981	Soil	HLAIFADMRPRERAEILLQLLGGEQRVTLAKKDIEVVR
Ga0318531_100599171	3300031981	Soil	ARVRILRGPFTDHLAIFADMRPRERVEILLQLLGGQQKVMLAQQDIEAVR
Ga0306922_119184301	3300032001	Soil	RVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318563_107280201	3300032009	Soil	RILRGPFTGHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318569_106104671	3300032010	Soil	HLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDVEVVR
Ga0318507_105248301	3300032025	Soil	PFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0310911_107251981	3300032035	Soil	LAIFADMKPRQRVEVLLQLLGGVQRVTLAKKDIEVVR
Ga0310911_107321451	3300032035	Soil	RRGARVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLATKDIEVVR
Ga0318559_104754222	3300032039	Soil	RGPFSGHLAIYADTRPRQRVEILLQLLGGEQRVELPKADIEAVRS
Ga0318549_104876681	3300032041	Soil	ALRRGARVRILHGPFTGHLAIFADMRPRQRVEILLRLLGGEQRVTLAKKDIEVVR
Ga0318545_101817791	3300032042	Soil	TGHLAIFADMKPRERVEILLQLLGAEQRVELAKGDVEAV
Ga0318545_102474541	3300032042	Soil	IFADMKPRERVEVLLQILGGEQRLELARTDIEVISS
Ga0318570_101577212	3300032054	Soil	ILRGPFSGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0318575_100828391	3300032055	Soil	PFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVAH
Ga0318533_102786182	3300032059	Soil	RILRGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0318533_106948241	3300032059	Soil	GHLAIFADMRPRERAEILLQLLGGEQRVTLAKKDIEVVR
Ga0318533_112889791	3300032059	Soil	HLAIFADMRPRERVEIPLHLLGGEQKVELAKNDVEVIH
Ga0318514_104962002	3300032066	Soil	QVRVVGGVFRDHLGVYAGMKPRQRVEILLQLLGGQQKVMLAQQDIEAVR
Ga0318514_105591831	3300032066	Soil	FSGHLAIFADMRPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318518_103902982	3300032090	Soil	VRILRGPFTGHLAIFADMKPRERVEILLQLLGGEQRVTLAKNDIEAVRP
Ga0306920_1011274783	3300032261	Soil	GDRVRILYGPFTGQLAIFADMKSRERVEILLQLLGAEQRVTLAQKDIEVVR
Ga0306920_1015164882	3300032261	Soil	FTGHLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0306920_1026806641	3300032261	Soil	VRILRGPFNGQLAIFADMKPRQRVEILLQLLGGEQRVTLAKKDIEVVR
Ga0306920_1031693101	3300032261	Soil	VRVRILRGPFSGHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0306920_1042802681	3300032261	Soil	LRGPFTGHLAIFADMRPRQRVEILLQLLGGEPRVTLAKKDIEVVR
Ga0318519_103446532	3300033290	Soil	HGARVRILRGPFTGHLAIFADMRPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318519_105746232	3300033290	Soil	RGDHVRVLRGPFTGHLAIFADMWPRERVEILLQLLGGEQRVTLAKKDIEVVR
Ga0318519_107122211	3300033290	Soil	RVRILRGPFTGHLAIFADMRPRQRVEILLQLLGGEQRVTLARKDIEVVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094705

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences