Metagenome / Metatranscriptome Family F094721

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094721
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	65 residues
Representative Sequence	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE
Number of Associated Samples	49
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	23.81 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.952 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (36.191 % of family members)
Environment Ontology (ENVO)	Unclassified (75.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (84.762 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.91% β-sheet: 0.00% Coil/Unstructured: 44.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04392	ABC_sub_bind	1.90
PF00589	Phage_integrase	1.90
PF03401	TctC	0.95
PF05119	Terminase_4	0.95
PF07007	LprI	0.95
PF01068	DNA_ligase_A_M	0.95
PF08239	SH3_3	0.95
PF02839	CBM_5_12	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.90
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.95
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.95
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.95
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.95
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
All Organisms	root	All Organisms	39.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
cellular organisms	root	All Organisms → cellular organisms	39.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.38 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.71 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.86 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.52 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.86 %
Bradyrhizobium sp. 186	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 186	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10020995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1790	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1022510	All Organisms → cellular organisms → Bacteria → Proteobacteria	1183	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10046622	Not Available	976	Open in IMG/M
3300004629\|Ga0008092_11324207	Not Available	775	Open in IMG/M
3300004633\|Ga0066395_10255237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	942	Open in IMG/M
3300004633\|Ga0066395_10400195	Not Available	773	Open in IMG/M
3300005332\|Ga0066388_100896859	All Organisms → cellular organisms → Bacteria → Proteobacteria	1465	Open in IMG/M
3300005332\|Ga0066388_100911883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1455	Open in IMG/M
3300005332\|Ga0066388_101283607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1260	Open in IMG/M
3300005332\|Ga0066388_101959275	Not Available	1048	Open in IMG/M
3300005332\|Ga0066388_102347070	Not Available	966	Open in IMG/M
3300005332\|Ga0066388_102572541	Not Available	926	Open in IMG/M
3300005332\|Ga0066388_105138459	Not Available	664	Open in IMG/M
3300005332\|Ga0066388_106998466	Not Available	567	Open in IMG/M
3300005363\|Ga0008090_10147637	Not Available	944	Open in IMG/M
3300005363\|Ga0008090_10160722	Not Available	869	Open in IMG/M
3300005363\|Ga0008090_10252409	Not Available	619	Open in IMG/M
3300005713\|Ga0066905_100011303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4267	Open in IMG/M
3300005713\|Ga0066905_100253823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1353	Open in IMG/M
3300005713\|Ga0066905_100451888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1056	Open in IMG/M
3300005713\|Ga0066905_102152734	Not Available	519	Open in IMG/M
3300005713\|Ga0066905_102314584	Not Available	502	Open in IMG/M
3300005764\|Ga0066903_100821570	Not Available	1666	Open in IMG/M
3300005764\|Ga0066903_101352380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1334	Open in IMG/M
3300005764\|Ga0066903_101405141	All Organisms → cellular organisms → Bacteria → Proteobacteria	1311	Open in IMG/M
3300005764\|Ga0066903_101924847	Not Available	1133	Open in IMG/M
3300005764\|Ga0066903_102276387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1046	Open in IMG/M
3300005764\|Ga0066903_102378847	Not Available	1024	Open in IMG/M
3300005764\|Ga0066903_102722683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300005764\|Ga0066903_102860129	Not Available	936	Open in IMG/M
3300005764\|Ga0066903_103158905	Not Available	891	Open in IMG/M
3300005764\|Ga0066903_103800383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300005764\|Ga0066903_104257895	Not Available	765	Open in IMG/M
3300005764\|Ga0066903_104490748	Not Available	744	Open in IMG/M
3300005764\|Ga0066903_105203907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	688	Open in IMG/M
3300005764\|Ga0066903_105273901	Not Available	683	Open in IMG/M
3300005764\|Ga0066903_107230447	Not Available	574	Open in IMG/M
3300005764\|Ga0066903_107297042	Not Available	571	Open in IMG/M
3300005764\|Ga0066903_107626612	Not Available	557	Open in IMG/M
3300009792\|Ga0126374_10303412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 186	1072	Open in IMG/M
3300009792\|Ga0126374_10474771	Not Available	895	Open in IMG/M
3300009792\|Ga0126374_10779671	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300010046\|Ga0126384_10484216	Not Available	1063	Open in IMG/M
3300010046\|Ga0126384_11710559	Not Available	595	Open in IMG/M
3300010047\|Ga0126382_10741883	Not Available	829	Open in IMG/M
3300010047\|Ga0126382_11018971	Not Available	727	Open in IMG/M
3300010047\|Ga0126382_11907357	Not Available	562	Open in IMG/M
3300010047\|Ga0126382_12045897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300010048\|Ga0126373_10650996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1109	Open in IMG/M
3300010048\|Ga0126373_10781986	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300010358\|Ga0126370_10292226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1288	Open in IMG/M
3300010359\|Ga0126376_10902064	Not Available	874	Open in IMG/M
3300010359\|Ga0126376_11548630	Not Available	693	Open in IMG/M
3300010360\|Ga0126372_10231990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1567	Open in IMG/M
3300010360\|Ga0126372_10287341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1436	Open in IMG/M
3300010361\|Ga0126378_10270524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1797	Open in IMG/M
3300010362\|Ga0126377_13399950	Not Available	515	Open in IMG/M
3300010366\|Ga0126379_13314609	Not Available	539	Open in IMG/M
3300010376\|Ga0126381_100299112	Not Available	2203	Open in IMG/M
3300010376\|Ga0126381_100983806	Not Available	1217	Open in IMG/M
3300010376\|Ga0126381_101677709	Not Available	918	Open in IMG/M
3300010376\|Ga0126381_102430376	Not Available	751	Open in IMG/M
3300010376\|Ga0126381_103549692	Not Available	612	Open in IMG/M
3300010398\|Ga0126383_10320194	Not Available	1558	Open in IMG/M
3300010398\|Ga0126383_11469197	Not Available	771	Open in IMG/M
3300010398\|Ga0126383_11539967	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
3300010398\|Ga0126383_11808559	Not Available	699	Open in IMG/M
3300010398\|Ga0126383_11838782	Not Available	694	Open in IMG/M
3300010863\|Ga0124850_1018459	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300012948\|Ga0126375_10114088	Not Available	1632	Open in IMG/M
3300012948\|Ga0126375_11128664	Not Available	648	Open in IMG/M
3300012948\|Ga0126375_11501338	Not Available	576	Open in IMG/M
3300012971\|Ga0126369_10784128	Not Available	1034	Open in IMG/M
3300012971\|Ga0126369_11301032	Not Available	817	Open in IMG/M
3300012971\|Ga0126369_12036540	Not Available	662	Open in IMG/M
3300016319\|Ga0182033_10539710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1007	Open in IMG/M
3300016341\|Ga0182035_10615896	Not Available	939	Open in IMG/M
3300016341\|Ga0182035_12199039	Not Available	500	Open in IMG/M
3300016371\|Ga0182034_11532106	Not Available	584	Open in IMG/M
3300016404\|Ga0182037_11718726	Not Available	559	Open in IMG/M
3300016445\|Ga0182038_10613042	Not Available	941	Open in IMG/M
3300021560\|Ga0126371_10216128	All Organisms → cellular organisms → Bacteria → Proteobacteria	2019	Open in IMG/M
3300021560\|Ga0126371_12290058	Not Available	652	Open in IMG/M
3300021560\|Ga0126371_13510461	Not Available	529	Open in IMG/M
3300027654\|Ga0209799_1019600	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300031543\|Ga0318516_10659593	Not Available	595	Open in IMG/M
3300031545\|Ga0318541_10040085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2366	Open in IMG/M
3300031545\|Ga0318541_10694372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300031549\|Ga0318571_10207043	Not Available	704	Open in IMG/M
3300031681\|Ga0318572_10397865	Not Available	819	Open in IMG/M
3300031713\|Ga0318496_10487884	Not Available	681	Open in IMG/M
3300031719\|Ga0306917_10222215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1438	Open in IMG/M
3300031719\|Ga0306917_10886398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300031747\|Ga0318502_10782610	Not Available	578	Open in IMG/M
3300031781\|Ga0318547_10679917	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300031796\|Ga0318576_10502154	Not Available	572	Open in IMG/M
3300031832\|Ga0318499_10325685	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
3300031912\|Ga0306921_10546747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1343	Open in IMG/M
3300031941\|Ga0310912_11257755	Not Available	562	Open in IMG/M
3300031947\|Ga0310909_10366400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1209	Open in IMG/M
3300032043\|Ga0318556_10559009	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300032059\|Ga0318533_10131684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1757	Open in IMG/M
3300032066\|Ga0318514_10169339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1138	Open in IMG/M
3300032261\|Ga0306920_101933595	Not Available	828	Open in IMG/M
3300033290\|Ga0318519_10439412	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.62%
Loam	Environmental → Terrestrial → Soil → Loam	32.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	32.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	3.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	36.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	32.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.52%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100209952	3300000597	Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKKAFEEVAKNWFTLAHQVQWLEHYGRPQTVVPRQKNLNKAAS*
AF_2010_repII_A100DRAFT_10225101	3300000655	Forest Soil	MRSRAEDYYRRGLEAEQCAAQVAELRLKKAFEEVAKNWFTLAHQVQWLEHYGRPQYGRPAPKEPE*
AF_2010_repII_A001DRAFT_100466223	3300000793	Forest Soil	EDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGRPQYGRPTPKEPEAS*
Ga0008092_113242071	3300004629	Tropical Rainforest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPEAS*
Ga0066395_102552374	3300004633	Tropical Forest Soil	YYRRGLEAQQHAAQAAAEPRIKQAFEQVADNWFTLAEQVQWLEQVGRPQYGRPTPKEPEAS*
Ga0066395_104001952	3300004633	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAQQAQWLEHYSRPQYGRSTPKEPE*
Ga0066388_1008968592	3300005332	Tropical Forest Soil	MHSRAADYYRRGLEPQQHAAQAAAEPRIKQAFEQVADNWFTLAEQVQWLEQGRPQYGRPTPKEPEAS*
Ga0066388_1009118832	3300005332	Tropical Forest Soil	MRSRAEDYYRRGLEAQQHAAQVAELRLKKAFQQAADNWFTLAEQAQWLEQYSRPQYGRPTPKEPE*
Ga0066388_1012836072	3300005332	Tropical Forest Soil	MRSRAEDYYRLGLEAQQRAAQVAELRLKKAFELVADDWFALAEQVRWLEQHRPQNGRPTPKEPE*
Ga0066388_1019592753	3300005332	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVGELRLKRAFEQVADNWFTLAEQLQRLEQFGRSQYGRPTPKEPEAL*
Ga0066388_1023470701	3300005332	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE*
Ga0066388_1025725412	3300005332	Tropical Forest Soil	MRSRVEDYYRRGLEAQQHAAQEPEQRLKKAFEQAADNWFTLAEQALWLEQYGRPRYGRPTPKEPE*
Ga0066388_1051384592	3300005332	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEHYARPQYGSPTPKEPEAS*
Ga0066388_1069984662	3300005332	Tropical Forest Soil	MHSRAADYYRRGLEAQQHAAQAAAEPRIKKAFEQVADNWFTLAEQLQWLEQYNRPQYGRPTPKEPE*
Ga0008090_101476372	3300005363	Tropical Rainforest Soil	MRSRAEEYHRRGLEAQQHAAQVAELRLKKAFEQAADNWFTLAEQAKWLEQYSRPQYGRPTPKEPE*
Ga0008090_101607222	3300005363	Tropical Rainforest Soil	MRSRAEDYYRRGLEAQQCAAQVGELRLKRAFEQVADNWFTLAEQLQWLEHYARPQYGSPTPKEPEAS*
Ga0008090_102524091	3300005363	Tropical Rainforest Soil	WRQMQRNILPLARVPRIRMRSRAEDYYRRGLEAQQHAAQEAELRFKKAFEQVADNWFTLAEQAQWLEHYSRPQYGRPTLKEPAS*
Ga0066905_1000113034	3300005713	Tropical Forest Soil	MHSRAEEYYRRGLEAQQHATQEPEQRLKKAFEQAADNWFTLAEQAIWLEQYSRPRYGRPTPKEPE*
Ga0066905_1002538233	3300005713	Tropical Forest Soil	MHSRAEDYYRRGLEARQHAAQVAELRLKRAFEQVADNWFTLAQQAQWLEHYNRPQYGRSTPKEPE*
Ga0066905_1004518882	3300005713	Tropical Forest Soil	MRSRAEDYYRRGLEAQQHAAQEAELRFKKAFEQVADNWFTLAEQAQWLEHYSRPQYGRRKEPAS*
Ga0066905_1021527341	3300005713	Tropical Forest Soil	MRSRAEDYYRRGLEAQQHAAQEPEQRLKKAFEQAADNWFTLAEQAIWLEQYSRPRYGRPTPKEPE*
Ga0066905_1023145841	3300005713	Tropical Forest Soil	WRQMTGGQRNILPLARVPRIRMRSRAEEYHRRGLEAQQHAAQVAELRLKKAFEQAADNWFTLAEQAKWLEQYSRPQYGRPTRKEPE*
Ga0066903_1008215702	3300005764	Tropical Forest Soil	MRSRAEDYYRLGLEAQQRAAQVAELRLKKAFELVAGDWFALAEQVRWLEQHRPQNGRPTPKEPE*
Ga0066903_1013523802	3300005764	Tropical Forest Soil	MRSRAEEYYRRGLEAQQHAAQVAELRLKKAFEEAADDWFALAEQVQWLEQYGRPQYGRPTPKEPE*
Ga0066903_1014051413	3300005764	Tropical Forest Soil	RAEDYYRRGLEAQQHAAQEAELRFKKAFEQVADNWFTLADQAQWLEHYSRPQYGRPTPKEPE*
Ga0066903_1019248474	3300005764	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVGELGLKRAFEQVAENWFTLAEQLQWLEQFGRSQYGRPTPKEPE*
Ga0066903_1022763872	3300005764	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVDELRLKRAFEQVADNWFTLAEQLQWQEQFGRSQYGRPTPKEPE*
Ga0066903_1023788472	3300005764	Tropical Forest Soil	MHSRAEDYYRRGLAAQQHAAQVAELHLKKAFEQVADNWFTLAKQVQWLEQGGSQYGRPTPKEPE*
Ga0066903_1027226833	3300005764	Tropical Forest Soil	YRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPE*
Ga0066903_1028601292	3300005764	Tropical Forest Soil	MHSRAADYYRRGLEAQQCAAQAAAEPRIRKAFEQVADNWFTLAEQLQWLEQVGRPQYGRPTPKEPE*
Ga0066903_1031589052	3300005764	Tropical Forest Soil	AEDYYRRGLEAQQHAAQEAELRFKKAFEQVADNWFTLAEQALWLEQYSRPRYGRPTPKET
Ga0066903_1038003831	3300005764	Tropical Forest Soil	MRSRAEGYYRRGLEAQQCAAQVDELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPE*
Ga0066903_1042578951	3300005764	Tropical Forest Soil	IRMRSRAEDYYRRGLEAQQCAAQVAELRLKKAFEQVADNWFTLAEQLQWLEQYNRPQYGRPTPKEPEAS*
Ga0066903_1044907481	3300005764	Tropical Forest Soil	DYYRRGLEAQQCAAQVGELRLKRAFEQVADNWFTLAEQLQRLEQFGRSQYGRPTPKEPEAL*
Ga0066903_1052039071	3300005764	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVAKNWFTLAEQAQWLEHYSRPQYGRPKEPAS*
Ga0066903_1052739012	3300005764	Tropical Forest Soil	MRSRAEGYYRRGLEARQCAAQVAELRLKKAFEQVADNWFTLAEQAQWLEHYSHPQYGRPTPKEPE*
Ga0066903_1072304471	3300005764	Tropical Forest Soil	RGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKQPE*
Ga0066903_1072970421	3300005764	Tropical Forest Soil	ARVPRIRMHSRAADYYRRGLEAQQHAAQAAAEPRIKKAFEQVADNWFTLAEQLQWLEQLGRPQYGRPTPKEPAA*
Ga0066903_1076266122	3300005764	Tropical Forest Soil	MRSRAEEYYRRGLEAQQHAAQAAAEPRIKKAFEQVADNWFTLAEQVQWLEHGRSQCGRPTPKEPE*
Ga0126374_103034123	3300009792	Tropical Forest Soil	RSRAEDYYRRGLEAQQHAAQEPEQRLKKAFEQAADNWFTLAEQLQWLEHYSRPQCGRPTPKEPE*
Ga0126374_104747712	3300009792	Tropical Forest Soil	MRSRAEDYYRLGLEAQQRAAQVAELRLKKAFELVADDWFALAEQVRWLEQHRPQNGRPTPKEP*
Ga0126374_107796712	3300009792	Tropical Forest Soil	YRRGLEAQQHAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGRPQYGRPTPKEPEAS*
Ga0126384_104842161	3300010046	Tropical Forest Soil	MRSRAEEYHRRGLEAQQHAAQVPELRLKKAFEQAADNWFTLAEQAKWLEQYSRPQYGRPTRKEPE*
Ga0126384_117105591	3300010046	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGRPQYGRPTPKEPEAS*
Ga0126382_107418832	3300010047	Tropical Forest Soil	MRSRAEGYYRRGLEAQQHAAQEAELRFKKAFEQVADNWFTLAEQAQWLEHYSRPQYGRPTPKRT*
Ga0126382_110189711	3300010047	Tropical Forest Soil	MHSRAEDYYRRGLEAQQHAAQAAAEPRIKKAFEQVADNWFTLAEQAKWLEQYSRPQYGRPTRKEPE*
Ga0126382_119073572	3300010047	Tropical Forest Soil	MRSRAEDYYRRGLEAQQHAAQVAELRLKKALEEAADDWFALAEQVQWLEQYGRPQYGRPTPKEPE*
Ga0126382_120458972	3300010047	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRPQYGRPTPKEPEAS*
Ga0126373_106509963	3300010048	Tropical Forest Soil	MRSRAADYYRRGLEAQQYAAQAGAEPRLKKAFEQVADNWFTLAEQVQWLEQHGRLQYGRPTPKEPEPS*
Ga0126373_107819862	3300010048	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKQPE*
Ga0126370_102922263	3300010358	Tropical Forest Soil	MCSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKQPE*
Ga0126376_109020641	3300010359	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQAAAEPRIKKAFEQVADNWFTLAEQVRWLEKYSRQQYGRPTPKEPKAS*
Ga0126376_115486301	3300010359	Tropical Forest Soil	MHSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPEAS*
Ga0126372_102319902	3300010360	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKKAFEQVADNWFTLAEQVQWLEQVGRPQYGRPTPKEPEAS*
Ga0126372_102873412	3300010360	Tropical Forest Soil	MHSRAEDYYRRGLEARQHAAQAAAEPHIKKAFEQVADNWFTLAQQAQWLEHYSRPQYGRPTPKEPEAS*
Ga0126378_102705243	3300010361	Tropical Forest Soil	MRSRAEDYYRRGLEAQQHAAQAAAEPRIKQAFEQVADNWFTLAEQLRWLEQFERPQYGRPTPKEPE*
Ga0126377_133999502	3300010362	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEHYARPQYGSPTLKEPEAS*
Ga0126379_133146091	3300010366	Tropical Forest Soil	MRSRAEEYYRRGLEAQQHAAQAAAEPRIKQAFEQVADNWFTLAEQVQWLEQVGRPQYGRPTPKEPEAS*
Ga0126381_1002991121	3300010376	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVVELRLKRAFEQVADNWFTLAEQLQWLEHYGRSQYGRPTPKEPDAS*
Ga0126381_1009838064	3300010376	Tropical Forest Soil	VRSRAEEYYRRGLEAQQHAAQAAAEPRIKQAFEQVADNWFTLAEQVQWLEQVGRPQYGRPTPKEPEAS*
Ga0126381_1016777091	3300010376	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAKAAAEPRIKKAFEQVADNWFTLAEQVRWLEKYSRQQYGRPTPKEPKAS*
Ga0126381_1024303761	3300010376	Tropical Forest Soil	YYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEHYARPQYGSPTPKEPEAS
Ga0126381_1035496921	3300010376	Tropical Forest Soil	MRSRAEDYYRRGLEAQQHAAQVAELRLKKAFEQAADNWFTLAKQVQWLEQYSRPQCGRPTPKEPEQAAS*
Ga0126383_103201941	3300010398	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVDELRLKRAFEQVADNWFTLAEQLQWQEQFGRSQYGRPTPKEPEAS*
Ga0126383_114691971	3300010398	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQAAAEPRIKKAFEQVADNWFTLAEQVRWLEKYSRQQYGRPTPKEPEAS*
Ga0126383_115399671	3300010398	Tropical Forest Soil	MHSRAEDYYRRGLEARQHAAQVAELRLKRAYEQVADNWFTLAQQAQWLEHYNRPQYGRSTPKEPE*
Ga0126383_118085593	3300010398	Tropical Forest Soil	MHSRAADYYRRGLEAQQHAAQAAAEPRIKQAFEQVADNWFTLAEQVQWLEQVGRPQYGRATPKEPEPS*
Ga0126383_118387822	3300010398	Tropical Forest Soil	MHSRAEDYYCRGLEAQQHAAQEAELRFKKAFEQVADNWFTLAEQAQWLEHYSRPQYGRRKEPAS*
Ga0124850_10184594	3300010863	Tropical Forest Soil	MHSRAEDYYRRGLEARQHAAQAAAEPHIKKAFEQVADNWFTLAEQAQWLEHYSRPQYGRPTPKEPEAS*
Ga0126375_101140882	3300012948	Tropical Forest Soil	MRSRAEDYYRRGLEAQQYAAQAAAEPRIKKAFEQVADNWFTMQWLEQFGRPQYGRPTPKET*
Ga0126375_111286641	3300012948	Tropical Forest Soil	MRSRAEDYYRRGLEAQQHAAQEAELRFKKAFEQVADNWFTLAEQAQWLEHYSRPQYGRPTPKEPEAS*
Ga0126375_115013381	3300012948	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVGELGLKRAFEQVAENWFTLAEQLQWLEHYAGPQYGSPTLKEPEAS*
Ga0126369_107841282	3300012971	Tropical Forest Soil	MSSRAEDYFRRGLEAQQHAAQVAELHLKKAFEQVADNWFTLAKQVQWLEQYSRPQCGRPTPKEPEQAAS*
Ga0126369_113010323	3300012971	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQAAAEPRIKKAFEQVADNWFTLAEQLQWVEQFGRPQYGRPTPKEPEAS*
Ga0126369_120365401	3300012971	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQAAAEPRIKKAFEQVADNWFTLAEQVRWLEKYSRPQYGRPTPKEPEAS*
Ga0182033_105397101	3300016319	Soil	AEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGRSQYGRPTPKEPEAS
Ga0182035_106158961	3300016341	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPEAS
Ga0182035_121990391	3300016341	Soil	EDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE
Ga0182034_115321062	3300016371	Soil	RGARRGNILPLARVPRIRMHSRAEDYYRRGLEAQQHAAQAAAEPRIKKAFEQVADNWFTLAEQMQWLEQYGRLQYGRPTPKEPAS
Ga0182037_117187261	3300016404	Soil	YRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEHYARPQYGSPTPKEPEAS
Ga0182038_106130423	3300016445	Soil	AEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEP
Ga0126371_102161286	3300021560	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQAAAEPRIKKAFEQVADNWFTLAEQLQWVEQFGRPQYGRPTPKEPEAS
Ga0126371_122900581	3300021560	Tropical Forest Soil	MRSRAEEYHRRGLEAQQHAAQVPELRLKKAFEQAADNWFTLAEQAKWLEQYSRPQYGRPTRKEPE
Ga0126371_135104612	3300021560	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKQPE
Ga0209799_10196003	3300027654	Tropical Forest Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAQQAQWLEHYSRPQYGRSTPKEPE
Ga0318516_106595932	3300031543	Soil	LEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGHSQYGRPTPKEPEAS
Ga0318541_100400851	3300031545	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE
Ga0318541_106943722	3300031545	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGRSQYGRPTPKEPEAS
Ga0318571_102070431	3300031549	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEHYARPQYGSPTLKEPEAS
Ga0318572_103978652	3300031681	Soil	MHSRAEDYYRRGLEAQQHAAQAAAEPRIKKAFEQVADNWFTLAEQVQWLEHGRSQCGRPTPKEPE
Ga0318496_104878841	3300031713	Soil	YYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE
Ga0306917_102222154	3300031719	Soil	LEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE
Ga0306917_108863982	3300031719	Soil	MRSRAEDYYRRGLEAQQCAAQEAELRLKEAFEQVADNWFTLAEQLQWLEHYSRPRYGRPTPKEPE
Ga0318502_107826101	3300031747	Soil	AEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPEAS
Ga0318547_106799172	3300031781	Soil	MRSRAEDYYRRGLEAQQCAAQAAAEPRIKKAFEQVANNWFTLAEQLQLLEQFGRPQYGRPTPKEPE
Ga0318576_105021541	3300031796	Soil	RRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE
Ga0318499_103256851	3300031832	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEHYARPQYG
Ga0306921_105467472	3300031912	Soil	MRSRAEDYYRRGLEAQHCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPE
Ga0310912_112577552	3300031941	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGHSQYGRPTPKEPEAS
Ga0310909_103664003	3300031947	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQLLEQFGRPQYGRPTPKEPE
Ga0318556_105590091	3300032043	Soil	MRSRAEDYYRRGLEAQQCAAQAAAEPRIKKAFEQVANNWFTLAEQLQLLEQFGRPQ
Ga0318533_101316841	3300032059	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRFKRAFEQVADNWFTLAEQLQWLEQYGRSQYGRPTPKEPE
Ga0318514_101693392	3300032066	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWLEQFGRSQYGRPTPKEPE
Ga0306920_1019335951	3300032261	Soil	MRSRAEDYYRRGLEAQQCAAQVVELRLKKAFEQVADNWFTLAEQLQWLEQYNRPQYGRPTPKEPE
Ga0318519_104394121	3300033290	Soil	MRSRAEDYYRRGLEAQQCAAQVAELRLKRAFEQVADNWFTLAEQLQWQEQFGRSQYGRPT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094721

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences