Metagenome / Metatranscriptome Family F094731

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094731
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	43 residues
Representative Sequence	MVPPKKTTSRPKRRIVAPAEKRTQVRLTVDSKFTKTHFSQLFA
Number of Associated Samples	75
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.23 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	84.76 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.286 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (46.667 % of family members)
Environment Ontology (ENVO)	Unclassified (41.905 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (39.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.80% β-sheet: 0.00% Coil/Unstructured: 66.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF12161	HsdM_N	7.62
PF00436	SSB	1.90
PF01939	NucS	1.90
PF08808	RES	0.95
PF08238	Sel1	0.95
PF12831	FAD_oxidored	0.95
PF13091	PLDc_2	0.95
PF17132	Glyco_hydro_106	0.95
PF01436	NHL	0.95
PF03432	Relaxase	0.95
PF00005	ABC_tran	0.95
PF08448	PAS_4	0.95
PF00239	Resolvase	0.95
PF01381	HTH_3	0.95
PF13560	HTH_31	0.95
PF09709	Cas_Csd1	0.95
PF07510	DUF1524	0.95
PF13751	DDE_Tnp_1_6	0.95
PF12760	Zn_Tnp_IS1595	0.95
PF00512	HisKA	0.95
PF09363	XFP_C	0.95
PF13290	CHB_HEX_C_1	0.95
PF06250	YhcG_C	0.95
PF01527	HTH_Tnp_1	0.95
PF01039	Carboxyl_trans	0.95
PF07394	DUF1501	0.95
PF13495	Phage_int_SAM_4	0.95
PF06114	Peptidase_M78	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.90
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	1.90
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.90
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.95
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.95
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.95
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.95
COG3843	Type IV secretory pathway, VirD2 component (relaxase)	Intracellular trafficking, secretion, and vesicular transport [U]	0.95
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.95
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.95
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
All Organisms	root	All Organisms	25.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
cellular organisms	root	All Organisms → cellular organisms	25.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	1.90 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.95 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1.90 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.95 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.95 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1.90 %
Methylocystis sp. SB2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SB2	0.95 %
Granulicella mallensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	0.95 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009635\|Ga0116117_1015111	Not Available	1967	Open in IMG/M
3300009638\|Ga0116113_1159215	Not Available	569	Open in IMG/M
3300009641\|Ga0116120_1115015	Not Available	881	Open in IMG/M
3300014160\|Ga0181517_10285031	Not Available	873	Open in IMG/M
3300014161\|Ga0181529_10610925	Not Available	568	Open in IMG/M
3300014167\|Ga0181528_10264001	Not Available	930	Open in IMG/M
3300014168\|Ga0181534_10202153	Not Available	1038	Open in IMG/M
3300014168\|Ga0181534_10249342	Not Available	942	Open in IMG/M
3300014199\|Ga0181535_10295259	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300014199\|Ga0181535_10741204	Not Available	558	Open in IMG/M
3300014491\|Ga0182014_10115385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SB2	1583	Open in IMG/M
3300014491\|Ga0182014_10472924	Not Available	616	Open in IMG/M
3300014492\|Ga0182013_10025826	All Organisms → cellular organisms → Bacteria → Proteobacteria	5096	Open in IMG/M
3300014492\|Ga0182013_10496535	Not Available	636	Open in IMG/M
3300014492\|Ga0182013_10712937	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300014658\|Ga0181519_10431592	Not Available	813	Open in IMG/M
3300014838\|Ga0182030_10685998	Not Available	964	Open in IMG/M
3300014838\|Ga0182030_11334516	Not Available	602	Open in IMG/M
3300014839\|Ga0182027_10442509	Not Available	1433	Open in IMG/M
3300014839\|Ga0182027_12117310	Not Available	536	Open in IMG/M
3300017940\|Ga0187853_10359641	Not Available	649	Open in IMG/M
3300017946\|Ga0187879_10055611	Not Available	2323	Open in IMG/M
3300017948\|Ga0187847_10469039	Not Available	696	Open in IMG/M
3300017988\|Ga0181520_10622934	Not Available	746	Open in IMG/M
3300017988\|Ga0181520_11072512	Not Available	530	Open in IMG/M
3300017988\|Ga0181520_11091123	Not Available	525	Open in IMG/M
3300018009\|Ga0187884_10374144	Not Available	573	Open in IMG/M
3300018025\|Ga0187885_10358773	Not Available	655	Open in IMG/M
3300018033\|Ga0187867_10666531	Not Available	567	Open in IMG/M
3300018037\|Ga0187883_10355059	Not Available	750	Open in IMG/M
3300018057\|Ga0187858_10758764	Not Available	576	Open in IMG/M
3300019787\|Ga0182031_1120035	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300022524\|Ga0224534_1080670	Not Available	593	Open in IMG/M
3300022849\|Ga0224531_1018681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1520	Open in IMG/M
3300023101\|Ga0224557_1241972	Not Available	602	Open in IMG/M
3300023247\|Ga0224529_1007562	Not Available	3154	Open in IMG/M
3300023247\|Ga0224529_1063348	Not Available	600	Open in IMG/M
3300025612\|Ga0208691_1061820	Not Available	846	Open in IMG/M
3300026502\|Ga0255350_1055760	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300028070\|Ga0255353_1040861	Not Available	1014	Open in IMG/M
3300028082\|Ga0255352_1059104	Not Available	527	Open in IMG/M
3300028087\|Ga0255354_1002547	All Organisms → cellular organisms → Bacteria	9163	Open in IMG/M
3300028090\|Ga0255349_1028266	Not Available	1271	Open in IMG/M
3300028268\|Ga0255348_1088712	Not Available	519	Open in IMG/M
3300028560\|Ga0302144_10252592	Not Available	571	Open in IMG/M
3300028566\|Ga0302147_10079186	Not Available	1136	Open in IMG/M
3300028566\|Ga0302147_10190510	Not Available	690	Open in IMG/M
3300028745\|Ga0302267_10159594	Not Available	1035	Open in IMG/M
3300028748\|Ga0302156_10084747	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1633	Open in IMG/M
3300028779\|Ga0302266_10067250	Not Available	1541	Open in IMG/M
3300028785\|Ga0302201_10192193	Not Available	853	Open in IMG/M
3300028873\|Ga0302197_10544803	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300028874\|Ga0302155_10390962	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300029889\|Ga0246001_1076103	Not Available	642	Open in IMG/M
3300029907\|Ga0311329_10715095	Not Available	648	Open in IMG/M
3300029908\|Ga0311341_10562189	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300029911\|Ga0311361_10004777	All Organisms → cellular organisms → Bacteria	28370	Open in IMG/M
3300029911\|Ga0311361_10691109	Not Available	938	Open in IMG/M
3300029911\|Ga0311361_10782166	Not Available	851	Open in IMG/M
3300029911\|Ga0311361_10982316	Not Available	710	Open in IMG/M
3300029913\|Ga0311362_10060980	All Organisms → cellular organisms → Bacteria	5509	Open in IMG/M
3300029913\|Ga0311362_11204900	Not Available	563	Open in IMG/M
3300029914\|Ga0311359_11148878	Not Available	512	Open in IMG/M
3300029915\|Ga0311358_10734898	Not Available	719	Open in IMG/M
3300029916\|Ga0302148_1208855	Not Available	551	Open in IMG/M
3300029922\|Ga0311363_11217539	Not Available	633	Open in IMG/M
3300029945\|Ga0311330_10935453	Not Available	645	Open in IMG/M
3300029952\|Ga0311346_10260035	Not Available	1841	Open in IMG/M
3300029952\|Ga0311346_10727527	Not Available	854	Open in IMG/M
3300029955\|Ga0311342_10059323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella mallensis	4331	Open in IMG/M
3300029955\|Ga0311342_10108661	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300029982\|Ga0302277_1216421	Not Available	739	Open in IMG/M
3300029985\|Ga0302280_1043793	Not Available	1929	Open in IMG/M
3300029985\|Ga0302280_1246624	Not Available	608	Open in IMG/M
3300029988\|Ga0302190_10334609	Not Available	586	Open in IMG/M
3300030011\|Ga0302270_10096035	Not Available	1882	Open in IMG/M
3300030011\|Ga0302270_10438129	Not Available	691	Open in IMG/M
3300030020\|Ga0311344_10116726	All Organisms → cellular organisms → Bacteria	2975	Open in IMG/M
3300030020\|Ga0311344_10304243	Not Available	1532	Open in IMG/M
3300030041\|Ga0302274_10077505	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300030041\|Ga0302274_10496807	Not Available	526	Open in IMG/M
3300030049\|Ga0302191_10275459	Not Available	621	Open in IMG/M
3300030049\|Ga0302191_10325889	Not Available	562	Open in IMG/M
3300030049\|Ga0302191_10353457	Not Available	536	Open in IMG/M
3300030051\|Ga0302195_10395841	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300030519\|Ga0302193_10195920	Not Available	1133	Open in IMG/M
3300030519\|Ga0302193_10263111	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300030760\|Ga0265762_1125507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	591	Open in IMG/M
3300031239\|Ga0265328_10326719	Not Available	595	Open in IMG/M
3300031259\|Ga0302187_10451076	Not Available	598	Open in IMG/M
3300031261\|Ga0302140_10521741	Not Available	915	Open in IMG/M
3300031524\|Ga0302320_10000391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	103198	Open in IMG/M
3300031524\|Ga0302320_10023351	All Organisms → cellular organisms → Bacteria	12140	Open in IMG/M
3300031524\|Ga0302320_10117297	All Organisms → cellular organisms → Bacteria	4180	Open in IMG/M
3300031524\|Ga0302320_10179042	All Organisms → cellular organisms → Bacteria → Proteobacteria	3102	Open in IMG/M
3300031524\|Ga0302320_10791708	Not Available	1052	Open in IMG/M
3300031524\|Ga0302320_11701548	Not Available	607	Open in IMG/M
3300031788\|Ga0302319_10004551	All Organisms → cellular organisms → Bacteria	28361	Open in IMG/M
3300031788\|Ga0302319_10260376	Not Available	2088	Open in IMG/M
3300032668\|Ga0316230_1314114	Not Available	512	Open in IMG/M
3300033402\|Ga0326728_10586751	Not Available	873	Open in IMG/M
3300033818\|Ga0334804_046628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	1280	Open in IMG/M
3300033822\|Ga0334828_106266	Not Available	686	Open in IMG/M
3300033887\|Ga0334790_173784	Not Available	633	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.24%
Aquatic	Environmental → Aquatic	23.81%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	64.76%
Freshwater	Environmental → Aquatic → Freshwater	23.81%
Soil	Environmental → Terrestrial → Soil	10.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	64.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	64.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.05%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.81%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	46.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	13.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.62%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	7.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.86%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022849	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T100	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023247	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026502	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r1	Environmental	Open in IMG/M
3300028070	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25	Environmental	Open in IMG/M
3300028082	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T0	Environmental	Open in IMG/M
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116117_10151114	3300009635	Peatland	MLYNTSQKGGGMTPPKKTEIRIKRRIVAPAEKRTQIRLTVDSKFTKTHFTQLFAVL
Ga0116113_11592151	3300009638	Peatland	MKKVTARTKRRIVAPAEKRTQVRLTVDSKFTKTHFSQLF
Ga0116120_11150151	3300009641	Peatland	MASPNKIIVRTKRRIVAPAEKRTQIRLTVDSKFTKGYFNQLFAVLKIRNKNA
Ga0181539_11055271	3300014151	Bog	MTPTKKTGARTKPRIVAPLEKRTQLRLTVDSKFTKTR
Ga0181517_102850312	3300014160	Bog	MISATKSTARTKRRIIAPAEKRTQVRLTVDSKFTKGHFTQLFAVLKIR
Ga0181529_106109251	3300014161	Bog	MPALNKTTVRTKRRVVAPAEKRTQARLTVDSKFTKSHFNQLFAVLKIR
Ga0181528_102640012	3300014167	Bog	MTTPKKAAIQTKRRVVAPAEKRTQIRLTVDSKFTKTHFTQLFAVLKIRNK
Ga0181534_102021531	3300014168	Bog	MKKVTARTKRRIVAPAEKRTQVRLTVDSKFTKTHFSQLFA
Ga0181534_102493422	3300014168	Bog	MTPPEKTTPRPKRRVVAPAEKRTQVRLTVDSKFTKSHFSQLFAVL
Ga0181535_102952592	3300014199	Bog	MAAPKKMAAHTKRRVVAPAEKRTQVRLTVDSKFTKSHFNQLFAVLKIQHKHT*
Ga0181535_107412041	3300014199	Bog	MVPMKKVTARTKRRIVAPAEKRTQVRLTVDSKFTKT
Ga0182014_101153853	3300014491	Bog	MTPPKTTAPRTKRRIVAPANKRTQVRLTVDSKFTKSHFN
Ga0182014_104729241	3300014491	Bog	MTATKRTGTRAKRRIVAPLEQRTQLRLTVDSKFTKTHFNLLFA
Ga0182013_100258267	3300014492	Bog	MVSPKKTTARPKRRIVAPAEKRTQIRLTVDSKFTKTYFGQLFAVLK
Ga0182013_104965352	3300014492	Bog	MAAPKKMAAHTKRRIVAPVEKRTQIRLTVDSKLTK
Ga0182013_107129371	3300014492	Bog	MPVAKKATTRPKRRIVAPAEKRTQIRLTVDSKYTK
Ga0181519_104315921	3300014658	Bog	MAPQTKTAPRAKRRVVSPAEKRIQVRLTVDSKFTKTHFSQ
Ga0182030_106859982	3300014838	Bog	MPSAKMATVRPKRRIVAPAEKRTQVRLTVDSKFTKCHFNQLFAVLKI
Ga0182030_113345161	3300014838	Bog	MPPQTKTATRAKRRVVSPAEKRTQVRLTVDSKFTKTHFSQ
Ga0182027_104425093	3300014839	Fen	MTPPKKAAIQTKRRIVAPLEKRTQLRLTIDSRFTKAH
Ga0182027_121173101	3300014839	Fen	MTPPEKTTPRPKRRVVAPAEKRTQVRLTVDSKFTKSHFSQLFA
Ga0187853_103596412	3300017940	Peatland	MAPEKKTTTRAKRRFVAPAEKRTQVRLTVDSKFTKTHFNQLFA
Ga0187879_100556114	3300017946	Peatland	MAPHTKTAPRAKRRVVSPAEKRIQVRLTVDSKFTKTHFSQLFAVLKIR
Ga0187847_104690391	3300017948	Peatland	MTATTRTGTRTKRRIVAPLEKRIQLRLTVDSKFTKTHFNQL
Ga0181520_106229341	3300017988	Bog	MTTPKKAAIQTKRRVVAPAEKRTQIRLTVDSKFTKT
Ga0181520_110725122	3300017988	Bog	MTPPKKTEIRIKRRIVAPAEKRTQIRLTVDSKFTKTHFTQLFAVLKIRNK
Ga0181520_110911232	3300017988	Bog	MTPQAKTATRAKRRVVSPAEERTQLRLTVDSKFTKSHFSQLFAVLKI
Ga0187884_103741441	3300018009	Peatland	MATAKKAVTRTKRRIVAPAEERTQIRLTVDSKFTKTHFTQLFAVL
Ga0187885_103587731	3300018025	Peatland	MTATTRTGTRTKRRIVAPLEKRIQLRLTVDSKFTKTHFNQLFAVLGIRK
Ga0187867_106665311	3300018033	Peatland	MVPPKKATTRTNRRIVAPAEKRTQIRLTVDSKFTKGYFNQLFA
Ga0187883_103550591	3300018037	Peatland	MAPQTKTAPRAKRRVVSPAEKRIQVRLTVDSKFTKTHFSQLFAVLKIRKQ
Ga0187858_107587641	3300018057	Peatland	MAPHTKTAPRAKRRVVSPAEKRIQVRLTVDSKFTKTHFSQLFAVLKIRRQNALAEHI
Ga0182031_11200353	3300019787	Bog	MAPPKRTTTRPKRRIVAPAEKRTQIRLTVDSKFTKTYFGQLFAVL
Ga0224534_10806702	3300022524	Soil	MTTPKKAAIQTKRRVVAPAEKRTQIRLTVDSKFTKTH
Ga0224531_10186812	3300022849	Soil	MAPPKKTAARTKRRIVTPAEKRTQVRLTVDSKFTKTHFNQL
Ga0224557_12419722	3300023101	Soil	MVSPKKTTARPKRRIVAPAEKRTQIRLTVDSKFTKTYFGQ
Ga0224529_10075622	3300023247	Soil	MAPQTKATSRTKRRVVAPAEKRTQVRLTVDSKFTKTHFNQL
Ga0224529_10633482	3300023247	Soil	MAPPKKAAALTKRRIVAPAEKRTQVRLTVDSKFTKTYFSQ
Ga0208691_10618202	3300025612	Peatland	MAPQTKTAPRAKRRVVSPAEKRIQVRLTVDSKFTKTHFSQLFAV
Ga0255350_10557602	3300026502	Soil	MAPPKRTTTRPKRRIVAPAEKRTQIRLTVDSKFTKTYFSQL
Ga0255353_10408611	3300028070	Soil	MSPQTKNATRAKRRVVAPAEKRTQVRLTVDSKFTKTHFNQLFAVLKIRNKNA
Ga0255352_10591041	3300028082	Soil	MPTAKKATARPKRRIVAPAEKRTQIRLTVDSKFTKTHFSQLF
Ga0255354_10025477	3300028087	Soil	MTTPKKAAIQTKRRVVAPAEKRTQIRLTVDSKFTKTHFTQLFA
Ga0255349_10282662	3300028090	Soil	MTPPKKPVPRPKRRVVAPAEKRTQVRLTVDSKFTKTHFNQLFAVLK
Ga0255348_10887121	3300028268	Soil	MAPPKKAAALTKRRIVAPAEKRTQVRLTVDSKFTKTYF
Ga0302144_102525921	3300028560	Bog	MLVAKKAMPRPKRRIVAPAEKRTQIRLTVDSKFTKTHFSQLF
Ga0302147_100791861	3300028566	Bog	MAPPKKAAALTKRRIVAPAEKRTQVRLTVDSKFTKTYFSQLF
Ga0302147_101905101	3300028566	Bog	MTTPKKTAIRTKRRIVAPAEKRTQIRLTVDSKFTKAHFTQLF
Ga0302267_101595941	3300028745	Bog	MTTEKNAPVRTKRRVVSPVEKRTQIRLTVDSKFTKAHFTQLFA
Ga0302156_100847472	3300028748	Bog	MTPPEKTTPRPKRRVVAPAEKRTQVRLTVDSKFTKSHLSQL
Ga0302266_100672501	3300028779	Bog	MAAPKKATTRPKRRIVAPAEKRTQVRLTVDSKFTKTHFSQLFAVLKIR
Ga0302201_101921933	3300028785	Bog	MTPPKKTATRTKRRIVAPVEKRTQIRLTVDSKFTK
Ga0302197_105448031	3300028873	Bog	MVPPKKTTSRPKRRIVAPAEKRTQVRLTVDSKFTKTHFSQLFA
Ga0302155_103909621	3300028874	Bog	MVPPKKTTSRPKRRIVAPAEKRTQVRLTVDSKFTK
Ga0246001_10761031	3300029889	Peat	MTPQMKTTIRAKRRVVAPAEKRTQVRLTVDSKFTKTHFN
Ga0311329_107150952	3300029907	Bog	MSPQTKNATRAKRRVVAPAEKRTQVRLTVDSKFTKSHFNQLFAVLKI
Ga0311341_105621892	3300029908	Bog	MAPPKRTTTRPKRRIVAPAEKRTQIRLTVDSKFTKTYFG
Ga0311361_1000477727	3300029911	Bog	MYTTSREEKEMTPPKKTATRTKRRIVAPVEKRTQIRLTVDSKFTKAYFSQLFAV
Ga0311361_106911091	3300029911	Bog	MTTPKKAAIQTKRRVVAPAEKRTQIRLTVDSKFTKTHFTQLFAVLKIRNKN
Ga0311361_107821661	3300029911	Bog	MATAKKAVTRTKRRIVAPAEERTQIRLTVDSKFTKTHFTQLFAVLKIRNK
Ga0311361_109823161	3300029911	Bog	MAPPKKRAARTKRRIVAPAEKRTQIRLTVDSKYTKSHFSQLFAVLKIRRK
Ga0311362_100609801	3300029913	Bog	MTPPKKTATRTKRRIVAPVEKRTQIRLTVDSKFTKAYFSQLFAVL
Ga0311362_112049002	3300029913	Bog	MTTPKKVAIQTKRRVVAPAEKRTQIRLTVDSKFTK
Ga0311359_111488781	3300029914	Bog	MTPPKKTTARSKRRIVAPAEKRTQVRLTVDSKFTKSHFSQL
Ga0311358_107348981	3300029915	Bog	MPTAKKATARPKRRIVAPVETRTQLRLTVDSKFTKTHFN
Ga0302148_12088551	3300029916	Bog	MAPPKKRAARTKRRIVAPAEKRTQIRLTVDSKYTKSHFSQLFAVLKIRRKN
Ga0311363_112175391	3300029922	Fen	MAPQTKTAPRAKRRVVSPAEKRIQVRLTVDSKFTKTHFSQLFAVLKI
Ga0311330_109354531	3300029945	Bog	MAPQTKTAPRAKRRVVSPAEKRIQVRLTVDSKFTKTHFSQLFAVLKIRRQNA
Ga0311346_102600351	3300029952	Bog	MPTAKKATTRPKRRIVAPAETRAQLRLTVDSKFTKTH
Ga0311346_107275271	3300029952	Bog	MAPPKKRAARTKRRIVAPAEKRTQIRLTVDSKYTKSH
Ga0311342_100593231	3300029955	Bog	MVPAKRLAAPAHRRIVAPAEKRTQIRLTVDSQFTKNYFTQLFAVLKIR
Ga0311342_101086611	3300029955	Bog	MTPPKRTAPRTKRRVVAPAEKRTQLRLTVDSRFTFWH
Ga0302277_12164212	3300029982	Bog	MTPTKKPTPRPKRRIVAPAEKRTQVRLTVDSKFTKSHFNQLFAVVKIRNKN
Ga0302280_10437934	3300029985	Fen	MTTPKKAAIRTKRRIVAPLEKRTQLRLTIDTKFTKTHF
Ga0302280_12466241	3300029985	Fen	MTPPKKAAIRTKRRIVAPLEKRTQLRLTIDSRFTKAHF
Ga0302190_103346092	3300029988	Bog	MTPPKKTATRTKRRIVAPVEKRTQIRLTVDSKFTKAY
Ga0302270_100960351	3300030011	Bog	MTPPKKTATRTKRRIVAPVEKRTQIRLTVDSKFTKA
Ga0302270_104381292	3300030011	Bog	MTTPKKAAIRTKRRIVAPLEKRTQLRLTVDTKFTKTHFNQLFSVLGIRKK
Ga0311344_101167263	3300030020	Bog	MTPPKKTATRTKRRIVAPVEKRTQIRLTVDSKFTKAYFS
Ga0311344_103042432	3300030020	Bog	MTPPKKPTPRPKRRVVAPAEKRTQVRLTVDSKFTKTHFSQLFAVLKIRRRNA
Ga0302274_100775051	3300030041	Bog	MIPPKRTAPRTKRRVVAPAEKRTQLRLTVDSRFTLSHFN
Ga0302274_104968071	3300030041	Bog	MAPPKKRAARTKRRIVAPAEKRTQIRLTVDSKYTKSHF
Ga0302191_102754592	3300030049	Bog	MKEETNMAPTKKAAARPKRRIVAPVETRTQIRLTVDSKFTKTHFSQLFAVL
Ga0302191_103258891	3300030049	Bog	MAAPKKATTRPKRRIVAPAEKRTQVRLTVDSKFTKTHFSQLFA
Ga0302191_103534571	3300030049	Bog	MSPQTKNATRAKRRVVAPAEKRTQVRLTVDSKFTKSHFNQLFSVLKIRKKNALAEHII
Ga0302195_103958411	3300030051	Bog	MVPPKKTTSRPKRRIVAPAEKRTQVRLTVDSKFTKTHFSQL
Ga0302193_101959202	3300030519	Bog	MTTPKKTAIRTKRRIVAPAEKRTQIRLTVDSKFTKAHFNQLFAV
Ga0302193_102631111	3300030519	Bog	MAPPKRTTTRPKRRIVAPAEKRTQIRLTVDSKFTKTYF
Ga0265762_11255072	3300030760	Soil	MDPQKMATARPKRRVVAPAEKRTQVRLTVDSKFTKTHF
Ga0265328_103267191	3300031239	Rhizosphere	MNPPKKTANRTKRRVVAPADKRTQIRLTVDSKFTKTHFNQLFAVLKI
Ga0302187_104510761	3300031259	Bog	MTTPKKAAIQTKRRIVAPAEKRTQIRLTIDSKFTKAHFTQLFAVLKIRNK
Ga0302140_105217412	3300031261	Bog	MISATKSTARTKRRIVAPAEKRTQVRLTVDSKFTKGHFTQLFAVLKIRN
Ga0302320_100003911	3300031524	Bog	MAPPKKRAARTKRRIVAPAEKRTQIRLTVDSKYTKSHFSQLFAVLKIRRKNA
Ga0302320_100233517	3300031524	Bog	MAPPKKTTARPKRRVVAPAEKRTQVRLTVDSKITKTHFNQLFCRTEDPQ
Ga0302320_101172976	3300031524	Bog	MPVAKKATTRPKRRIVAPAEKRTQIRLTVDSKYTKSHFSQLFAVLKIRRKNA
Ga0302320_101790424	3300031524	Bog	MTTPKKTAIRTKRRIVAPAEKRTQIRLTVDSKFTKAHF
Ga0302320_107917082	3300031524	Bog	MATAKKAVTRTKRRIVAPAEERTQIRLTVDSKFTKTHF
Ga0302320_117015481	3300031524	Bog	MTTPKKVAIQTKRRVVAPAEKRTQIRLTVDSKFTKTHFTQLFAVL
Ga0302319_100045511	3300031788	Bog	MYTTSREEKEMTPPKKTATRTKRRIVAPVEKRTQIRLTVDSKFTKAYFSQ
Ga0302319_102603761	3300031788	Bog	MISATKSTARTKRRIVAPAEKRTQVRLTVDSKFTKGHFTQLFAVL
Ga0316230_13141141	3300032668	Freshwater	MMTLPKKPTPRPKRRVVAPAEKRTQIRLTVDSKFTKTHFNQ
Ga0326728_105867511	3300033402	Peat Soil	MTTPKKTAMRTKRRIVAPAEKRTQIRLTVDSKFTKT
Ga0334804_046628_3_143	3300033818	Soil	MTPPEKTTPRPKRRVVAPAEKRTQVRLTVDSKFTKSHFSQLFAVLKI
Ga0334828_106266_1_120	3300033822	Soil	MSPQTKNATRAKRRVVAPAEKRTQVRLTVDSKFTKSHFNQ
Ga0334790_173784_3_107	3300033887	Soil	MTTPKKAAIQTKRRVVAPAEKRTQIRLTVDSKFTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094731

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences