Metagenome Family F094736

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094736
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	74 residues
Representative Sequence	MPAKPETYFLTSATRRTASGSEFGYPTVEAALRAADVILGKDAELIWIEDREGNLILPADQVRLRASSSRSALGAR
Number of Associated Samples	61
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.90 %
% of genes near scaffold ends (potentially truncated)	19.05 %
% of genes from short scaffolds (< 2000 bps)	79.05 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.286 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog (29.524 % of family members)
Environment Ontology (ENVO)	Unclassified (69.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (49.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.88% β-sheet: 13.46% Coil/Unstructured: 58.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01339	CheB_methylest	19.05
PF05532	CsbD	13.33
PF01757	Acyl_transf_3	3.81
PF00487	FA_desaturase	2.86
PF05239	PRC	2.86
PF03330	DPBB_1	1.90
PF11752	DUF3309	1.90
PF01638	HxlR	0.95
PF01274	Malate_synthase	0.95
PF01988	VIT1	0.95
PF07886	BA14K	0.95
PF06202	GDE_C	0.95
PF01566	Nramp	0.95
PF03063	Prismane	0.95
PF02525	Flavodoxin_2	0.95
PF12680	SnoaL_2	0.95
PF00849	PseudoU_synth_2	0.95
PF02881	SRP54_N	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	38.10
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	13.33
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.86
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.86
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.95
COG1151	Hydroxylamine reductase (hybrid-cluster protein)	Energy production and conversion [C]	0.95
COG1152	CO dehydrogenase/acetyl-CoA synthase alpha subunit	Energy production and conversion [C]	0.95
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.95
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.95
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.95
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.95
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.95
COG2225	Malate synthase	Energy production and conversion [C]	0.95
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
All Organisms	root	All Organisms	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
cellular organisms	root	All Organisms → cellular organisms	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.90 %
unclassified Rhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae	1.90 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.90 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	1.90 %
unclassified Methylocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.29 %
Rhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	1.90 %
Methylocapsa sp. S129	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	0.95 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.95 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009617\|Ga0116123_1112605	Not Available	718	Open in IMG/M
3300009621\|Ga0116116_1038600	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300009621\|Ga0116116_1080121	Not Available	921	Open in IMG/M
3300009644\|Ga0116121_1280599	Not Available	536	Open in IMG/M
3300009762\|Ga0116130_1074401	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300009762\|Ga0116130_1076124	Not Available	1053	Open in IMG/M
3300014158\|Ga0181521_10392999	Not Available	685	Open in IMG/M
3300014160\|Ga0181517_10007596	All Organisms → cellular organisms → Bacteria	9001	Open in IMG/M
3300014160\|Ga0181517_10016663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5280	Open in IMG/M
3300014160\|Ga0181517_10037594	All Organisms → cellular organisms → Bacteria	3081	Open in IMG/M
3300014160\|Ga0181517_10107551	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300014160\|Ga0181517_10586633	Not Available	559	Open in IMG/M
3300014161\|Ga0181529_10011318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8241	Open in IMG/M
3300014161\|Ga0181529_10018878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5824	Open in IMG/M
3300014161\|Ga0181529_10489925	Not Available	652	Open in IMG/M
3300014161\|Ga0181529_10695022	Not Available	525	Open in IMG/M
3300014169\|Ga0181531_10014713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4485	Open in IMG/M
3300014199\|Ga0181535_10051760	All Organisms → cellular organisms → Bacteria → Proteobacteria	2827	Open in IMG/M
3300014199\|Ga0181535_10101063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1859	Open in IMG/M
3300014199\|Ga0181535_10289059	Not Available	981	Open in IMG/M
3300014200\|Ga0181526_10754382	Not Available	613	Open in IMG/M
3300014490\|Ga0182010_10328838	Not Available	824	Open in IMG/M
3300014490\|Ga0182010_10405817	Not Available	744	Open in IMG/M
3300014490\|Ga0182010_10512853	Not Available	664	Open in IMG/M
3300014491\|Ga0182014_10013404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7698	Open in IMG/M
3300014491\|Ga0182014_10060628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2509	Open in IMG/M
3300014491\|Ga0182014_10087192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1930	Open in IMG/M
3300014491\|Ga0182014_10118270	Not Available	1555	Open in IMG/M
3300014491\|Ga0182014_10125160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	1494	Open in IMG/M
3300014491\|Ga0182014_10239301	Not Available	959	Open in IMG/M
3300014491\|Ga0182014_10309432	Not Available	809	Open in IMG/M
3300014492\|Ga0182013_10224679	Not Available	1107	Open in IMG/M
3300014492\|Ga0182013_10228812	Not Available	1093	Open in IMG/M
3300014493\|Ga0182016_10822069	Not Available	516	Open in IMG/M
3300014494\|Ga0182017_10300854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1005	Open in IMG/M
3300014496\|Ga0182011_10552203	Not Available	737	Open in IMG/M
3300014496\|Ga0182011_10612464	Not Available	692	Open in IMG/M
3300014499\|Ga0182012_10532718	Not Available	760	Open in IMG/M
3300014502\|Ga0182021_11953943	Not Available	706	Open in IMG/M
3300014502\|Ga0182021_12103035	Not Available	680	Open in IMG/M
3300014502\|Ga0182021_12115527	Not Available	678	Open in IMG/M
3300014655\|Ga0181516_10018002	All Organisms → cellular organisms → Bacteria	3725	Open in IMG/M
3300014657\|Ga0181522_10435861	Not Available	786	Open in IMG/M
3300014658\|Ga0181519_10537628	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300014658\|Ga0181519_10591611	Not Available	684	Open in IMG/M
3300014658\|Ga0181519_10914251	Not Available	544	Open in IMG/M
3300014658\|Ga0181519_10943676	Not Available	535	Open in IMG/M
3300014838\|Ga0182030_10256293	All Organisms → cellular organisms → Bacteria → Proteobacteria	1991	Open in IMG/M
3300014839\|Ga0182027_11468843	Not Available	672	Open in IMG/M
3300014839\|Ga0182027_11551054	Not Available	649	Open in IMG/M
3300014839\|Ga0182027_11639069	Not Available	628	Open in IMG/M
3300017931\|Ga0187877_1311962	Not Available	600	Open in IMG/M
3300017941\|Ga0187850_10230121	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300017946\|Ga0187879_10747942	Not Available	545	Open in IMG/M
3300017948\|Ga0187847_10022135	All Organisms → cellular organisms → Bacteria	3907	Open in IMG/M
3300017988\|Ga0181520_10004714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22488	Open in IMG/M
3300017988\|Ga0181520_10015651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9210	Open in IMG/M
3300017988\|Ga0181520_10019913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7733	Open in IMG/M
3300017988\|Ga0181520_10039193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4740	Open in IMG/M
3300017988\|Ga0181520_10073982	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300017988\|Ga0181520_10127760	Not Available	2111	Open in IMG/M
3300017988\|Ga0181520_10256393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1334	Open in IMG/M
3300017988\|Ga0181520_10491128	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300017988\|Ga0181520_10698794	Not Available	693	Open in IMG/M
3300017988\|Ga0181520_10808165	Not Available	632	Open in IMG/M
3300018004\|Ga0187865_1323382	Not Available	506	Open in IMG/M
3300018023\|Ga0187889_10183388	Not Available	972	Open in IMG/M
3300018030\|Ga0187869_10223062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	918	Open in IMG/M
3300018033\|Ga0187867_10533393	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300018034\|Ga0187863_10112459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1523	Open in IMG/M
3300018035\|Ga0187875_10574242	Not Available	595	Open in IMG/M
3300018038\|Ga0187855_10319549	Not Available	907	Open in IMG/M
3300018046\|Ga0187851_10264970	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300018047\|Ga0187859_10361699	Not Available	792	Open in IMG/M
3300018057\|Ga0187858_10602497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → unclassified Rhizobiaceae → Rhizobiaceae bacterium	662	Open in IMG/M
3300023090\|Ga0224558_1059119	Not Available	1510	Open in IMG/M
3300023090\|Ga0224558_1117144	Not Available	902	Open in IMG/M
3300023091\|Ga0224559_1167756	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300025812\|Ga0208457_1034363	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300028268\|Ga0255348_1023917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1210	Open in IMG/M
3300028762\|Ga0302202_10229562	Not Available	930	Open in IMG/M
3300028813\|Ga0302157_10623969	Not Available	554	Open in IMG/M
3300029914\|Ga0311359_10744829	Not Available	695	Open in IMG/M
3300029922\|Ga0311363_10633090	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300029954\|Ga0311331_10906682	Not Available	778	Open in IMG/M
3300030000\|Ga0311337_11769678	Not Available	542	Open in IMG/M
3300030020\|Ga0311344_11161294	Not Available	586	Open in IMG/M
3300031235\|Ga0265330_10030221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2434	Open in IMG/M
3300031235\|Ga0265330_10065344	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300031235\|Ga0265330_10388450	Not Available	590	Open in IMG/M
3300031241\|Ga0265325_10081345	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300031249\|Ga0265339_10023058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3601	Open in IMG/M
3300031249\|Ga0265339_10244650	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031249\|Ga0265339_10361161	Not Available	683	Open in IMG/M
3300031344\|Ga0265316_10231707	Not Available	1360	Open in IMG/M
3300031524\|Ga0302320_11338420	Not Available	719	Open in IMG/M
3300033402\|Ga0326728_10278280	All Organisms → cellular organisms → Bacteria	1555	Open in IMG/M
3300033405\|Ga0326727_10037167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8286	Open in IMG/M
3300033405\|Ga0326727_10546531	Not Available	987	Open in IMG/M
3300033755\|Ga0371489_0046036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2971	Open in IMG/M
3300033755\|Ga0371489_0121148	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300033890\|Ga0334810_109855	Not Available	664	Open in IMG/M
3300033982\|Ga0371487_0508544	Not Available	505	Open in IMG/M
3300034065\|Ga0334827_032894	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300034195\|Ga0370501_0119144	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.38%
Host-Associated	Host-Associated	7.62%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	49.52%
Terrestrial	Environmental → Terrestrial	42.86%
Plants	Host-Associated → Plants	7.62%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	49.52%
Soil	Environmental → Terrestrial → Soil	23.81%
Peat	Environmental → Terrestrial → Peat	19.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.62%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	49.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.62%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	42.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	22.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	29.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.33%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	11.43%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	11.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	7.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.67%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.71%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.71%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116123_11126052	3300009617	Peatland	MSAKPETYFLTSATRRTAAGSEFGYPTVEAALRAADIILEEDAELIWIEDRKGNLILPADQVRLRASSSRSAR*
Ga0116116_10386002	3300009621	Peatland	MSAKPETYFLTSATRRTAAGSEFGYPTVEAALRAADIILEEDAELIWIEDREGNLILPADQVRLRLSSSRSAG*
Ga0116116_10801213	3300009621	Peatland	MSAKPETYFLTSATRRSATGSEFGYPAVEAALRAADVIMAKDAELIWIEDREGNLILPADQV
Ga0116121_12805992	3300009644	Peatland	MEKWGMPGKPETYFLTSATRQRATGSAFGYPTVEAALRAADVILAKDAELIWIEDREGNLVLPADQVRLRASSPRSAPGAR*
Ga0116130_10744013	3300009762	Peatland	MAAKPETYFLTSATRQRATGSEFGYPTVEAALRAADAILAKDEELIWIEDREGNLILPADQVRLRASSPRSAPGAR*
Ga0116130_10761241	3300009762	Peatland	MPTTYFLTSTTRWKASASEFGYPTVEAALGAADVILGNGADSVWILDHEGKLILPADQVRLRAPSSRSAR*
Ga0181521_103929991	3300014158	Bog	MPTTYFLTSATRWKASASEFGYPTVDAALGAADVILGNGADSVWILDHEGKLILPADQVRLRASSSRSAR*
Ga0181517_100075966	3300014160	Bog	MEKWGMPGKPETYFLTPATRQRATGSAFGYPTVEAALRAADVILAKDAELIWIEDRDGNLVLPADQVRLRASSPRSAPGAR*
Ga0181517_100166632	3300014160	Bog	MAAKPETYFLTTATRRNACGSAFGYPTVEAAIHAVDVISAKSAELIWIEDREGNLILPADQVRLRVRSLRSTPDAR*
Ga0181517_100375944	3300014160	Bog	MDLATWGMAAMPTTYFLTSATRWKASSSEFGYPTVEAALRAADVILGNGADSVWILDHAGNLILPADQVKVRLSWSRSAR*
Ga0181517_101075512	3300014160	Bog	MTAKPETYFLTSATRRNACGSEFGYPTVEAALRAADAILAKDAELIWIEDRRGNLILPADQVRLRASSGRLAQ*
Ga0181517_105866331	3300014160	Bog	MPTTYFLTSATRWKASASEFGYPTVDAALGAADVMLGNGADSVWILDHEGKLILPADQVRLRAPSSRSAR*
Ga0181529_100113184	3300014161	Bog	MTAKPETYFLTSETKRNACGSEFGYPTVEAAIRAVDVLLAKTADLIWIEDREGNLILPADQVRLRVRSLRATPDAR*
Ga0181529_1001887810	3300014161	Bog	MAAKPETYFLASESRRNACGGAFGYPTVEAAIRAVDVILAKNAELIWIEDREGNLILPADQVKLRVRSLRAAPDAH*
Ga0181529_104899251	3300014161	Bog	MAAKPETYFLTSAARRNTCGSEFGYPTVEAALRAADAILAKGAELIWIEDRRGNLILPADQVRLRASSGRLAQ*
Ga0181529_106950221	3300014161	Bog	MAAKPETYFLTSATRRNACGSAFGYPTVEAALCAADAILAKDGELIWIEDRRGNLILPADQVRLRASSGRLAQ*
Ga0181531_100147136	3300014169	Bog	MSAKPETYFLTSATKRTETGSEFGYPTVEAALRAADVILAKNAELIWIEDRAGNIILPADQVRFRLSSSRSAR*
Ga0181535_100517602	3300014199	Bog	MAANPDTYFLTSATRRTASGSEFGYPTVEAALRAADAILAKDAELIWIEDRERSLILPADQVRLRASSSRSAPDAR*
Ga0181535_101010632	3300014199	Bog	MTAKPETYFLASPTRRNACGSAFGYPTVEAALRAADVILGNNAESIWIENREGNLILPADQVRLRVTSLRSAPDAR*
Ga0181535_102890592	3300014199	Bog	MEKWGMPGKPETYFLTPATRQRATGSAFGYPTVEAALRAADVILAKDAELIWIEDREGNLVLPADQVRLRASSPRSAPGAR*
Ga0181526_107543822	3300014200	Bog	YFLTSATRWKASSSEFGYPTVEAALRAADVILAKDAELIWIEDRDGNLVLPADQVRLRASSPRSAPGAR*
Ga0182010_103288381	3300014490	Fen	MTAKPETYFLASPTRRNACGSEFGYPTVEAALRAADVILGKNAESIWIENREGNLILPADQVKLRVTSLRSAPDAR*
Ga0182010_104058172	3300014490	Fen	MSAKPETYFLTSATRRTAIGSEFGYPTVEAALRAADAVLAKDAELIWIEDREGNLILPADQVRLRASASRSAPGVR*
Ga0182010_105128531	3300014490	Fen	MPAKPETYFLTSATRRTTSGSEFGYPTVEAALRAADAILAKDSELIWIEDREGNLILPADQVRLRASSSRSAAGAR*
Ga0182014_100134041	3300014491	Bog	FLTSSTRWKASASGFSYPTVEAALRAADAILKKDAELIWIEDREGNLILPADQVRLRAPSSRSASDAR*
Ga0182014_100606282	3300014491	Bog	MSAKPETYFLTSATRRTAIGSEFGYPTVEAALRAADGILAKDAELIWIEDREGNLILPADQVRLRASASRSAPGVR*
Ga0182014_100871921	3300014491	Bog	MPAKPETYFLTSATRQRATGSEFGYPTVEAALRAADAILKKDAELIWIEDREGNLILPADQVRL
Ga0182014_101182702	3300014491	Bog	MPAKPETYFLTSATKQGATGSEFGYPTVEAALRAAGVILGKDAELIWIEDREGNLILPADQVRLRAPSSRSAPGAR*
Ga0182014_101251604	3300014491	Bog	MPAKPGVYFVTSATRRNASGSAFAYPTVESTLRTADAILGSRAESVWIVDREGNLILPADQVRLRAFSPHSALGAR*
Ga0182014_102393012	3300014491	Bog	MPAKPETYFLTSATRRTASGNEFGYPTVEAALCAANVILGKGAELIWIEDREGNLILPADQVRLRASSSRSAPGAR*
Ga0182014_103094321	3300014491	Bog	MSAKPETYFLTSATKRNACGSEFGYPTVEAALRAAGVIAEKNAELIWIEDREGNLILPADQVRLRAASLRSAPGAR*
Ga0182013_102246792	3300014492	Bog	MPAKPETYFLTSATRRTASGSEFGYPTVEAALRAEDVILGKDAELIWIEDRERNLILSADQVRLRAPSLRSKPSAR*
Ga0182013_102288123	3300014492	Bog	MAAKPETYFLTSETRRNACGSEFGYPTVEAALRAVDAVLGKSAELIWIEDREGNLILPADQVRLRVRSLRAAPDAH*
Ga0182016_108220692	3300014493	Bog	MPAKPETYFLTSATRRTASGNECGYPTVEAALRAAGVILGKDAELIWIVDREGNLILPADQVRPPASSSSAPGAR*
Ga0182017_103008541	3300014494	Fen	MPAKPETYFLTSATKQGATGSEFGYPTVEAALRAAGVILGKDAELIWIEDREGNLILPADQVRLRASSSRSAAGAR*
Ga0182011_105522032	3300014496	Fen	MPAKPETYFLTSATRRTASGNEFGYPTVEAALCAADVILGKGAELIWIEDREGNFVLAADQLRLRLSSSRSAR*
Ga0182011_106124643	3300014496	Fen	MPAKPETYFLTSATKQGATGSEFGYPTVEAALRAAGAILAKDAELIWIEDREGNLILPADQVRLRASSSHSAPGAR*
Ga0182012_105327182	3300014499	Bog	MEKWGMPGKPETYFLTSATRQRATGSAFGYPTVEAALRAVDVILAKDAELIWIEDREGNLVLPADQVRLRASSPRSAPGAR*
Ga0182021_119539432	3300014502	Fen	MPAKPETYFLTSATRRTASGNEFGYPTVEAALRAAGVILGKDAELIWIEDREGNLILPADQVSPPASSSTAPGAR*
Ga0182021_121030352	3300014502	Fen	MPAKPETYFLTSATKQGATGSEFGYPTVEAALRAADAILKKDAELIWIEDREGNLILPADQVRLRASSSRCAPDAR*
Ga0182021_121155272	3300014502	Fen	MTAKPETYFLASPTRRNACGSEFGYPTVEAALRAADVVLGKNAESIWIENRAGNLILPADQVKLRVTSLRPAPDAR*
Ga0181516_100180027	3300014655	Bog	MDLATWGMAAMPTTYFLTSATRWKASSSEFGYPTVEAALRAADVILGNGADSVWILDHAGNLILPADQVRVRLSWSRSAR*
Ga0181522_104358612	3300014657	Bog	SATRRNACGSEFGYPTVEAALRAADAILAKDAELIWIEDRRGNLILPADQVRLRASSGRLAQ*
Ga0181519_105376282	3300014658	Bog	MTAKPETYFLTSETKRNACGSEFGYPTVEAAIRAVDVILAKTADLIWIEDREGNLILPADQVRLRVRSLRATPDAR*
Ga0181519_105916111	3300014658	Bog	ATRRTASGSEFSYPTVEAALRAADAILAKDAELIWIEDREGNLILPADQVKLRASSSRSAPDAR*
Ga0181519_109142511	3300014658	Bog	MPAKPETYFLTSATRRTTSGSEFGYPTVEAALRAADAILAKDAELIWIEDREGNLILPADQVKLRASSSRSAPDPR*
Ga0181519_109436762	3300014658	Bog	MPAKPETYFLTSATRQRATGSEFGYPTVEAALRAADAILKKDAELIWIEDREGNLILPADQVRLRASSSRSAAGAR*
Ga0182030_102562933	3300014838	Bog	MPAKPETYFLTSATRRTASANEFGYPTVEAALRAAGVILGKDAELIWIEDREGNLILPADQVRRRASSSRCAPDAR*
Ga0182027_114688433	3300014839	Fen	MPAKPETYFLTSATRRTASGSEFGYPTVEAALRAADVILGKDAELIWIEDREGNLILPADQVRLRASSSRSALGAR*
Ga0182027_115510541	3300014839	Fen	MSAKPETYFLTSATRRTAIGSEFGYPTVEAALRAADGILAKDAELIWIEDREGNLILPADQVRLRA
Ga0182027_116390692	3300014839	Fen	MPAKPETYFLTSATRQRATGSEFGYPTVEAALRAADVILGKDAELIWIEDREGNLILPADQLRLRLSSSRSAR*
Ga0187877_13119622	3300017931	Peatland	MAAKPETYFLTSATRQRATGSEFGYPTVEAALRAADVILAKDAELIWIEDRKGNLILPADQVRLRASSSRSAR
Ga0187850_102301211	3300017941	Peatland	MPGKPETYFLTSATRQRATGSAFGYPTVEAALRAADVILAKDAELIWIEDREGNLVLPADQVRLRASSPRSAPGAR
Ga0187879_107479422	3300017946	Peatland	MTAKPETYFLTSATRRNACGSEFGYPTVEAALRAADAILAKDAELIWIEDRRGNLILPADQVRLRASSGRL
Ga0187847_100221354	3300017948	Peatland	MEKWGMPGKPETYFLTSATRQRATGSAFGYPTVEAALRAADVILAKDAELIWIEDREGNLVLPADQVRLRASSPRSAPGAR
Ga0181520_1000471415	3300017988	Bog	MAAKPETYFLTTATRRNACGSAFGYPTVEAAIHAVDVISAKSAELIWIEDREGNLILPADQVRLRVRSLRSTPDAR
Ga0181520_1001565111	3300017988	Bog	MTAKPETYFLTSETKRNACGSEFGYPTVEAAIRAVDVILAKTADLIWIEDREGNLILPADQVRLRVRSLRATPDAR
Ga0181520_1001991311	3300017988	Bog	MAAKPETYFLASESRRNACGGAFGYPTVEAAIRAVDVILAKNAELIWIEDREGNLILPADQVKLRVRSLRAAPDAH
Ga0181520_100391934	3300017988	Bog	MPGKPETYFLTSATRQRATGSAFGYPTVEAALRAADVILAKDAELIWIEDRDGNLVLPADQVRLRASSPRSAPGAR
Ga0181520_100739822	3300017988	Bog	MDLATWGMAAMPTTYFLTSATRWKASSSEFGYPTVEAALRAADVILGNGADSVWILDHAGNLILPADQVKVRLSWSRSAR
Ga0181520_101277601	3300017988	Bog	MPAKPETYFLTSATRRTTSGSEFGYPTVEAALRAADAILAKDAELIWIEDREGNLILPADQVKLRASSSRSAPNAR
Ga0181520_102563931	3300017988	Bog	MPTTYFLTSATRWKASASEFGYPTVDAALGAADVMLGNGADSVWILDHEGKLILPADQVRLRAPSSRSAR
Ga0181520_104911282	3300017988	Bog	MAANPDTYFLTSATRRTASGSEFGYPTVEAALRAADAILAKDAELIWIEDREGNLILPADQVRLRASSSRSAPDAR
Ga0181520_106987941	3300017988	Bog	MTAKPETYFLTSATRRNACGSEFGYPTVEAALRAADAILAKDAELIWIEDRRGNLILPADQVRLRASSGRLAQ
Ga0181520_108081651	3300017988	Bog	MAAKPETYFLTSAARRNTCGSEFGYPTVEAALRAADAILAKGAELIWIEDRRGNLILPADQVRLRASSGRLAQ
Ga0187865_13233821	3300018004	Peatland	MPAKPETYFLTSATRRRATGSEFGYPTIEAALRTADAILGNRAEPVWIVDREGNLVLPADQVRLRSSPSCSAR
Ga0187889_101833883	3300018023	Peatland	MPTTYFLTSATRWKASASEFGYPTVDAALGAADVMLGNGADSVWILDHEGKLILPADQVRLRASSSRSAR
Ga0187869_102230622	3300018030	Peatland	MPTTYFLTSTTRWKASASEFGYPTVEAALGAADVILGNGADSVWILDHEGKLILPADQVRLRASSSRSAR
Ga0187867_105333932	3300018033	Peatland	MPTTYFLTSTTRWKASASEFGYPTVEAALGAADVILGNGADSVWILDHEGKLILPADQVRLRAPSSRSAR
Ga0187863_101124592	3300018034	Peatland	MPGKPETYFLTSATRQRATGSAFGYPTVEAALRAADVILGNGADSVWILDHAGNLILPADQVRVRLSWSRSAR
Ga0187875_105742421	3300018035	Peatland	TSATRQRATGSEFGYPTVEAALRAADAILAKDEELIWIEDREGNLILPADQVRLRASLSRSAPDAR
Ga0187855_103195491	3300018038	Peatland	MPTTYFLTSATRWKASASEFGYPTVDAALGAADAMLGNGADSVWILDHEGKLILPADQVRLRAPSSRSAR
Ga0187851_102649702	3300018046	Peatland	MAANPDTYFLTSATRRTASGSEFSYPTVEAALRAADAILAKDAELIWIEDREGNLILPADQVRLRASSSRSAPDAR
Ga0187859_103616992	3300018047	Peatland	MPAKPETYFLTSATRRTASGNEFGYPTVEAALRAADVILAKDAELIWIEDREGNLVLPADQVRLRASSSRCAPDAR
Ga0187858_106024971	3300018057	Peatland	MAANPDTYFLTSATRRTASGSEFSYPTVEAALRAADAILAKDEELIWIEDREGNLILPADQVRLRASSSRSAR
Ga0224558_10591193	3300023090	Soil	MPAKPETYFLTSATRQRATGSEFGYPTVEAALRAADAILKKDAELIWIEDREGNLILPADQVRLRAPSSRSASDAR
Ga0224558_11171442	3300023090	Soil	MPAKPGVYFVTSATRRNASGSAFAYPTVESTLRTADAILGSRAESVWIVDREGNLILPADQVRLRAFSPHFALGAR
Ga0224559_11677562	3300023091	Soil	MSAKPETYFLTSATRRTAIGSEFGYPTVEAALRAADGILAKDAELIWIEDREGNLILPADQVRLRASASRSAPGVR
Ga0208457_10343632	3300025812	Peatland	MSAKPETYFLTSATRRTAAGSEFGYPTVEAALRAADIILEEDAELIWIEDREGNLILPADQVRLRLSSSRSAG
Ga0255348_10239171	3300028268	Soil	GMAAKPETYFLTSETRRNACGSEFGYPTVEAALRAVDAVLGKSAELIWIEDREGNLILPADQVRLRVRSLRAAPDAH
Ga0302202_102295622	3300028762	Bog	MPAKPETYFLTSATRRKVTSGEFGYPTIEAALRAADGMLAKDSELIWIEDREGNLILPADQVRLRLSSSRSAR
Ga0302157_106239691	3300028813	Bog	LAGGREMSAKPETYFLTSATKRNACGSEFGYPTVEAALRAAGVIAEKNAELIWIEDREGNLILPADQVRL
Ga0311359_107448291	3300029914	Bog	MTPIKRATRGAAAKPETCFLTSAAGQRASASGFAYPTVESALRAADAILGNRAESVWIVDREGNLILPADQARAPASPSRRAR
Ga0311363_106330903	3300029922	Fen	MPGKPETYFLTSATRQRATGSAFGYPTVEAALRAADVILAKDAELIWIEDREGNLILPADQVRLRASSSRSAPDAR
Ga0311331_109066821	3300029954	Bog	LAGGREMSAKPETYFLTSATKRNACGSEFGYPTVEAALRAAGVIAEKNAELIWIEDREGNLILPADQVRLRAASLRSAPGAR
Ga0311337_117696781	3300030000	Fen	TAKPETYFLASPTRRNACGSEFGYPTVEAALRAADVILGKNAESIWIENREGNLILPADQVKLRVTSLRSAPDAR
Ga0311344_111612941	3300030020	Bog	MPAKPETYFLTSATRRTASGNEFGYPTVEAALRAAGVILGKDAELIWIEDREGNLILPADQVRLRASSSRCAPDAR
Ga0265330_100302213	3300031235	Rhizosphere	MTAKPETYFLTSATRRTAVGSAFGYPTIEAALRAVGAILAKDVELIWIEDREGNLILPADQVRLRAPAAPGAG
Ga0265330_100653442	3300031235	Rhizosphere	MAAKPETYFLTSATRRNACGSEFGYPTVEAALRAADAILAKDGELIWIEDRGGNLILPADQVRLRASSARLAR
Ga0265330_103884501	3300031235	Rhizosphere	ATRSDFGYPTVESALRTADGILGIGAESVWIVDPAGNSILPADQARLRASASRSAPGVR
Ga0265325_100813452	3300031241	Rhizosphere	MPTNLETDFLASATGRGASGSDLGYPTVESTLGAADAILGNPAESVWIVDRAGNSILPADQARLRASASRSAPGVR
Ga0265339_100230584	3300031249	Rhizosphere	MTAKPETYFLTSATRRNACGSEFGYPTVEAALRAADAILAKDSELIWIEDRGGNLILPADQVRLRASSARSAR
Ga0265339_102446503	3300031249	Rhizosphere	MTAKPETYFLTSATRRTAVGSAFGYPTIEAALRAVGAILAKDVELIWIEDREGNLILPADQVRLR
Ga0265339_103611612	3300031249	Rhizosphere	MPAKPETYFLTSATRRTATGSKFGYPDIEAALCAADVILAKNAEAIWIEGREGNLILPAEQVRLRAPGAR
Ga0265316_102317073	3300031344	Rhizosphere	GSDFGYPTAKTALRTADGILGIEAESVWIVDPEGNLILPADQARSHASSSRSAPGVR
Ga0302320_113384203	3300031524	Bog	MPAKPETYFLTSATRRTASGNEFGYPTVEAALRAAGVILGKDAELIWIEDREGNLILPADQVRLRASSS
Ga0326728_102782801	3300033402	Peat Soil	MSAKPETYFLTSATRRTAAGSEFGYPTVEAALRAAEIILEEDAELIWIEDREGHLILPADQVRLRLSSSRSAG
Ga0326727_100371679	3300033405	Peat Soil	MAAKPETYFLTSATRRTATGSEFGYPTVEAALRAADVILGKDAELIWIEDREGNLILPADQVRLRLSSSRSTR
Ga0326727_105465311	3300033405	Peat Soil	ETCFVTSATRRNACGSEFGYPTVEAALRAAEVILGKNAELIWIEDREGNLILPADQVRLRVSSLRSAPGAR
Ga0371489_0046036_263_493	3300033755	Peat Soil	MAARPETCFVTSATRRNACGSEFGYPTVEAALRAAEVILGKNAELIWIEDREGNLILPADQVRLRVSSLRSAPGAR
Ga0371489_0121148_156_377	3300033755	Peat Soil	MAAKPETYFLTSATRRNACGSAFGYPTVEAALCAADAILAKDGELIWIEDRRGNLILPADQVRLRASSGRLAQ
Ga0334810_109855_3_203	3300033890	Soil	TSATRRTAIGSEFGYPTVEAALRAADGILAKDAELIWIEDREGNLILPADQVRLRASASRSAPGVR
Ga0371487_0508544_104_334	3300033982	Peat Soil	MTAKPETYFLASPTRRNACGSAFGYPTVEAALRAADVILGNNAESIWIENREGNLILPADQVRLRVTSLRSAPDAR
Ga0334827_032894_1_258	3300034065	Soil	MTPIKRATRGAAAKPETCFLTSAAGQRASASGFAYPTVESALRAADAILGNRAESVWIVDREGNLILPADQARAPASPSRRAWGAL
Ga0370501_0119144_446_676	3300034195	Untreated Peat Soil	MAAKPETYFLTSATRQSATGSEFGYPTVEAALRAADAILAKDAELIWIEDREGNLILPADQVRLRASSSRSAPGAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094736

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences