Metagenome Family F094745

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094745
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	71 residues
Representative Sequence	TAGRRPGGAVALTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Number of Associated Samples	85
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.05 %
% of genes near scaffold ends (potentially truncated)	89.52 %
% of genes from short scaffolds (< 2000 bps)	81.90 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.905 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (54.286 % of family members)
Environment Ontology (ENVO)	Unclassified (66.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 45.19% β-sheet: 0.00% Coil/Unstructured: 54.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01594	AI-2E_transport	48.57
PF13602	ADH_zinc_N_2	2.86
PF07885	Ion_trans_2	1.90
PF08448	PAS_4	0.95
PF00196	GerE	0.95
PF13432	TPR_16	0.95
PF03237	Terminase_6N	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	48.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	80.95 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	77.14 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	45.71 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	45.71 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Sediminicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus	44.76 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Sediminicoccus rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	44.76 %
Unclassified	root	N/A	18.10 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004153\|Ga0063455_100183949	Not Available	1011	Open in IMG/M
3300004153\|Ga0063455_100548912	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300004635\|Ga0062388_101340023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	716	Open in IMG/M
3300005332\|Ga0066388_104090463	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300005332\|Ga0066388_104195149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	735	Open in IMG/M
3300005340\|Ga0070689_102148374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	511	Open in IMG/M
3300005365\|Ga0070688_101562984	Not Available	538	Open in IMG/M
3300005507\|Ga0074259_10928382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	504	Open in IMG/M
3300005618\|Ga0068864_100854487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	897	Open in IMG/M
3300005618\|Ga0068864_102600141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	512	Open in IMG/M
3300005718\|Ga0068866_11026329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	587	Open in IMG/M
3300005841\|Ga0068863_102532249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	522	Open in IMG/M
3300009553\|Ga0105249_11306687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	797	Open in IMG/M
3300009789\|Ga0126307_10175498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1718	Open in IMG/M
3300009792\|Ga0126374_11529245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300010042\|Ga0126314_10484037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	897	Open in IMG/M
3300010042\|Ga0126314_11472747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	512	Open in IMG/M
3300010048\|Ga0126373_10471601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293	Open in IMG/M
3300010359\|Ga0126376_10590335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	1048	Open in IMG/M
3300010359\|Ga0126376_10746232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300010366\|Ga0126379_12180632	Not Available	655	Open in IMG/M
3300010398\|Ga0126383_13627425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	504	Open in IMG/M
3300010399\|Ga0134127_13074680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	544	Open in IMG/M
3300012212\|Ga0150985_118070779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	524	Open in IMG/M
3300012971\|Ga0126369_12163950	Not Available	644	Open in IMG/M
3300012987\|Ga0164307_11081009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	658	Open in IMG/M
3300013308\|Ga0157375_10292437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1792	Open in IMG/M
3300015371\|Ga0132258_10196388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4891	Open in IMG/M
3300015371\|Ga0132258_13447404	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300016270\|Ga0182036_10409657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1058	Open in IMG/M
3300016270\|Ga0182036_10869694	Not Available	738	Open in IMG/M
3300016270\|Ga0182036_11734170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	528	Open in IMG/M
3300016341\|Ga0182035_11754380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	561	Open in IMG/M
3300016404\|Ga0182037_10407767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1121	Open in IMG/M
3300016404\|Ga0182037_10416497	Not Available	1110	Open in IMG/M
3300016422\|Ga0182039_11469653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	620	Open in IMG/M
3300019361\|Ga0173482_10732979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	515	Open in IMG/M
3300021476\|Ga0187846_10166784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	929	Open in IMG/M
3300025936\|Ga0207670_11748203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	529	Open in IMG/M
3300026088\|Ga0207641_10976317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	843	Open in IMG/M
3300026869\|Ga0207821_1022107	Not Available	627	Open in IMG/M
3300028146\|Ga0247682_1070725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	638	Open in IMG/M
3300031543\|Ga0318516_10750968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	552	Open in IMG/M
3300031544\|Ga0318534_10605324	Not Available	623	Open in IMG/M
3300031561\|Ga0318528_10580191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	602	Open in IMG/M
3300031572\|Ga0318515_10013213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3756	Open in IMG/M
3300031572\|Ga0318515_10511941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	640	Open in IMG/M
3300031573\|Ga0310915_10692893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	719	Open in IMG/M
3300031640\|Ga0318555_10590949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	601	Open in IMG/M
3300031679\|Ga0318561_10632312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	589	Open in IMG/M
3300031681\|Ga0318572_10072543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1898	Open in IMG/M
3300031713\|Ga0318496_10803072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	518	Open in IMG/M
3300031719\|Ga0306917_10101664	All Organisms → cellular organisms → Bacteria → Proteobacteria	2063	Open in IMG/M
3300031723\|Ga0318493_10319576	Not Available	840	Open in IMG/M
3300031724\|Ga0318500_10676064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	525	Open in IMG/M
3300031736\|Ga0318501_10091383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1505	Open in IMG/M
3300031744\|Ga0306918_10343389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1157	Open in IMG/M
3300031747\|Ga0318502_10219018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	1105	Open in IMG/M
3300031748\|Ga0318492_10684154	Not Available	549	Open in IMG/M
3300031751\|Ga0318494_10057115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2076	Open in IMG/M
3300031763\|Ga0318537_10394913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	510	Open in IMG/M
3300031768\|Ga0318509_10337969	Not Available	843	Open in IMG/M
3300031769\|Ga0318526_10017298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2463	Open in IMG/M
3300031769\|Ga0318526_10413140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	551	Open in IMG/M
3300031770\|Ga0318521_10473483	Not Available	751	Open in IMG/M
3300031779\|Ga0318566_10158179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300031779\|Ga0318566_10303541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300031780\|Ga0318508_1016399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1752	Open in IMG/M
3300031781\|Ga0318547_10065355	All Organisms → cellular organisms → Bacteria → Proteobacteria	2001	Open in IMG/M
3300031782\|Ga0318552_10202161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300031782\|Ga0318552_10636022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	544	Open in IMG/M
3300031792\|Ga0318529_10009982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3509	Open in IMG/M
3300031792\|Ga0318529_10345896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300031821\|Ga0318567_10080836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1731	Open in IMG/M
3300031832\|Ga0318499_10298403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	623	Open in IMG/M
3300031833\|Ga0310917_10910654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	591	Open in IMG/M
3300031845\|Ga0318511_10018120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2532	Open in IMG/M
3300031880\|Ga0318544_10024277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	2062	Open in IMG/M
3300031890\|Ga0306925_10099845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3088	Open in IMG/M
3300031893\|Ga0318536_10162122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1137	Open in IMG/M
3300031941\|Ga0310912_11358269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	537	Open in IMG/M
3300031946\|Ga0310910_10170540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1675	Open in IMG/M
3300031946\|Ga0310910_10386864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1107	Open in IMG/M
3300031959\|Ga0318530_10191212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	838	Open in IMG/M
3300032001\|Ga0306922_10136614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2615	Open in IMG/M
3300032009\|Ga0318563_10146089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1267	Open in IMG/M
3300032025\|Ga0318507_10203336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	855	Open in IMG/M
3300032025\|Ga0318507_10376707	Not Available	618	Open in IMG/M
3300032042\|Ga0318545_10007357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3217	Open in IMG/M
3300032043\|Ga0318556_10041441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	2192	Open in IMG/M
3300032043\|Ga0318556_10670396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	540	Open in IMG/M
3300032059\|Ga0318533_10431483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	963	Open in IMG/M
3300032060\|Ga0318505_10147671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1088	Open in IMG/M
3300032063\|Ga0318504_10495075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	585	Open in IMG/M
3300032063\|Ga0318504_10626358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	517	Open in IMG/M
3300032065\|Ga0318513_10198472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300032091\|Ga0318577_10198393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300032091\|Ga0318577_10597586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Sediminicoccus → Sediminicoccus rosea	524	Open in IMG/M
3300032261\|Ga0306920_100634783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.52%
Host-Associated	Host-Associated	10.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.57%
Plants	Host-Associated → Plants	10.48%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.90%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Cave	Environmental → Terrestrial → Cave	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	54.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063455_1001839491	3300004153	Soil	VALTGLVTFLMLFGLAASPTSFDVPVLDRVADIGVLSLYTLGAATLLLPQPEPRWPTTMAGRSAENSLPRPASAA*
Ga0063455_1005489122	3300004153	Soil	GGAVALTGLVTFLMLFGLAASPVPFEVPVLDRVADIGVLSLYTVGAAALLLPVPAPQEPNVLAARPAGG*
Ga0062388_1013400231	3300004635	Bog Forest Soil	ALTGLVTFLMLFGFAASPTQFDVPVLDRIADIFVLSLYTVGATALLLPPPEPRWPTATAGRSADS*
Ga0066388_1040904632	3300005332	Tropical Forest Soil	VALTGLVTFLMLFGLAASPLPFDVPVFDRVADIGVLSLYTVGATTVLLPPPKPRSPAATAGQ*
Ga0066388_1041951491	3300005332	Tropical Forest Soil	SAERRPGGAVALTGLVTFLMLFGLSASPTSFDVPVLDRVADIGVLSLYTVGAATLLLPQHEPTWASATAAPSAESSWSRPADAA*
Ga0070689_1021483742	3300005340	Switchgrass Rhizosphere	GRRPGGAVALTGLVTFLMLFGLAASSVPFDVPVLDRVSDIGLLSLYTIGATTLLLPARPPQWQAAMSGRPADH*
Ga0070688_1015629841	3300005365	Switchgrass Rhizosphere	AVALTGLVTFLMLFGLAASSVPFDVPVLDRVSDIGLLSLYTIGATTLLLPARPPQWQPAMSGRPADH*
Ga0074259_109283821	3300005507	Arabidopsis Rhizosphere	GAVALTGLVTFLMLFGLAASSRAFEVPVLDRVADIGLLSLYTVGATALLLPQPRSPTVATRPADVVA*
Ga0068864_1008544872	3300005618	Switchgrass Rhizosphere	GWLMTAGRRPGGAVALTGLVTFLMLFGLAAAPVPFDVPVLDRVADIGVLSLYTVGATALLLPPPKPRWPAAMVGRSAGS*
Ga0068864_1026001412	3300005618	Switchgrass Rhizosphere	WIMNAGRRPGGAVALTGLVTFLMLFGLAAAPVPFDVPVLDRVADIGVLSLYTVGAAALLLPVPAPQEPNVLAARPAGG*
Ga0068866_110263291	3300005718	Miscanthus Rhizosphere	AVALTGLITFLMLFGLSTPPTSFEVPVLDRIADILILSIYTIAATELLLPPPKPQWPAALQGQWSARA*
Ga0068863_1025322491	3300005841	Switchgrass Rhizosphere	GGAVALTGLVTFLMLFGLAAAPVPFDVPVLDRVADIGVLSLYTVGATALLLPPPKPRWPAAMVGRSAGS*
Ga0105249_113066871	3300009553	Switchgrass Rhizosphere	RWMSTVGRRPGGAVALTGLVTFLMLFGLAASSVPFDVPVLDRVSDIGLLSLYTIGATTLLLPARPPQWQAAMSGRSSDH*
Ga0126307_101754982	3300009789	Serpentine Soil	AGRRPGGAVALTSLVTFLMLFGLSASPVPFEVPVLDRVTDIFVLSLYTIAATTLLLPTAAPRSQPPWRAAHTGS*
Ga0126374_115292451	3300009792	Tropical Forest Soil	GGAVALTGLVTFLMLFGLAASPTQFEVPVLDRIADIFVLSLYTIGTTALLLPPPPEPRWPTATAARSAHIS*
Ga0126314_104840371	3300010042	Serpentine Soil	MTTAGRRPGGAVALTGLVTFLMLFGLAASPVPFEVPVLDRVADIGVLSLYTVGAAALLLPVPAPQEPIVPAARPADG*
Ga0126314_114727471	3300010042	Serpentine Soil	AGRRPGGAVALTGLVTFLMLFGLAAAPVPFDVPVLDRVADIGVLSLYTVGATALLLPPPALRGPAAMAGRSAGS*
Ga0126373_104716012	3300010048	Tropical Forest Soil	VALTGLVTFLMLFGLTASPTPFEVPVLDRIADIFVLSLYTIGTTALLLPPPDPRWPAAQHPVLGRA*
Ga0126376_105903352	3300010359	Tropical Forest Soil	GAVALTGLVTFLMLFGLTASPTPFEVPVLDRIADIFVLSLYTIGTTALLLPPPRPRWPAVMAGRSAHSS*
Ga0126376_107462322	3300010359	Tropical Forest Soil	GRRSGGAVALTGLVTFLMLFGLAASPTQFEVPVLDRIADIFVLSLYTIGTTALLLPPPPEPRWPTATAGRSAHIS*
Ga0126379_121806321	3300010366	Tropical Forest Soil	VALTGLVTFLMLFGLAASPTQFDVPVLDRIADIFVVSLYTIGATALILPPPEPRWPATMTGRPMHIS*
Ga0126383_136274251	3300010398	Tropical Forest Soil	RRAGGGVALTGLVTFLMLFGLSASPTPFEVPVLDRIVDIFVLSLYTVAAATLILPAAGSRWPDATAGSSLPTS*
Ga0134127_130746801	3300010399	Terrestrial Soil	WLMTAGRRPGGAVALTGLVTFLMLFGLAAAPVPFDVPVLDRVADIGVLSLYTVGATALLLPPPKPRWPAAMVGRSAGS*
Ga0150985_1180707791	3300012212	Avena Fatua Rhizosphere	GAVALTGLVTFLMLFGLAASPSSFDVPVLDRVADIGVLSLYTVGAATLLLPQPEPRWPTVMAGRSTENSVPRPASAA*
Ga0126369_121639502	3300012971	Tropical Forest Soil	VTFLMLFGLAAAPIPFDEPVLDRIADIFVLSLYTVGAAMLLLPPPEPRVPAAMAGRSAHIS*
Ga0164307_110810091	3300012987	Soil	LTGLVTFLMLFGLAASPVPFEVPVLDRVADIGVLSLYTVGAAALLLPVPAPQEPTVLAARPADG*
Ga0157375_102924372	3300013308	Miscanthus Rhizosphere	SRINTAGQRQGGAVALTGLITFLMLFGLSASPTSFEVPVLDRIADILILSIYTIAATELLLPPPKPRWPAALQGQWYARA*
Ga0132258_101963887	3300015371	Arabidopsis Rhizosphere	LGRRPGGAAALTGLVTFLMLFGLAASHARFDVPVLDRVTDIGILSLYTVGATALLLPSKEPSWLGAMTDRRINRFRARRG*
Ga0132258_134474042	3300015371	Arabidopsis Rhizosphere	GGRPGGAVALTGLVTFLMLFGLSASPASFEVPVLDRIMDIGVLSLYTIAAAELLLPQLHWPVATAGDSADRSRSRPTSGT*
Ga0182036_104096571	3300016270	Soil	TAGRRPGGAVALTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Ga0182036_108696942	3300016270	Soil	VALTGLVTFLMLFGLASSPVPFDVPVLDRIADIALLSLYTVGATTLLLTPREPRWPTATVGRSADG
Ga0182036_117341702	3300016270	Soil	LTGLVTFLMLFGLSASPAPFDVPVLDRIADIGVLSLYTIGATALLLPPPEPRSLAGMADRSAHIS
Ga0182041_107328902	3300016294	Soil	FGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0182035_117543802	3300016341	Soil	AGRRPGGAVALTGLATFLMLFGLAASPTQFEVPVLDRIADIFLLSLYTVAAAALLLPPDPRWSANTAGSPAHVS
Ga0182037_104077672	3300016404	Soil	PGRPGRAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0182037_104164972	3300016404	Soil	LTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Ga0182037_117037711	3300016404	Soil	MLFGLAAAPTPFEVPVLDRVADIFVLSLYTIATTALLLPPTHPQWSTAAAGSLAHFS
Ga0182039_114696532	3300016422	Soil	MLFGLAASPTQFEVPVLDRIADIFLLSLYTVAAAALLLPPDPRWSANTAGSPAHIS
Ga0173482_107329791	3300019361	Soil	INTAGQRQGGAVALTGLITFLMLFGLSASPTSFEVPVLDRIADILILSIYTIAATELLLPPPKPRWPAALQGQWSARA
Ga0187846_101667841	3300021476	Biofilm	RRRPGGAVALTGLVTFLMLFGLSASPAPFEVPVLDRIADIGLLSLYTVAAATLLLPSRGPRRPAAMAGRSARSSLPRPAA
Ga0207670_117482032	3300025936	Switchgrass Rhizosphere	WMSTVGRRPGGAVALTGLVTFLMLFGLAASSVPFDVPVLDRVSDIGLLSLYTIGATTLLLPARPPQWQAAMSGRPADH
Ga0207641_109763172	3300026088	Switchgrass Rhizosphere	AVVLTGLITFLMLFGLSASPTSFEVPVLDRIADILILSIYTIAATELLLPPPKPRWPAALQGQWSARA
Ga0207821_10221072	3300026869	Tropical Forest Soil	TGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQWPAMAGSPGHIS
Ga0247682_10707252	3300028146	Soil	QGGAVALTGLITFLMLFGLSASPTSFEVPVLDRIADILILSIYTIAATELLLPPPKPRWPAALQGQWSARA
Ga0318516_107509682	3300031543	Soil	MTAGRRPGGAVALTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Ga0318534_106053241	3300031544	Soil	VALTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Ga0318528_105801912	3300031561	Soil	ITKGRRQGGAVALTGLVTFVMLFGFAASPVPFDVPVLDRIVDIFVLSLYTVGATTLLLPPPDPRRPAAVAPHSAHIS
Ga0318515_100132132	3300031572	Soil	MSSGRRPGHAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0318515_105119412	3300031572	Soil	RRPGGAVALTGLVTFLMLFGLAAAPTPFEVPVLDRVADIFVLSLYTIATTALLLPPTHPQWSTAAAGSLAHFS
Ga0310915_106928932	3300031573	Soil	RPGGAVALTGVVTFLMLFGLAASPVPFEVPVLDRIVDIFVLSLYTVGATTLLLPPPDTRWPDAIGASSAENS
Ga0318555_105909492	3300031640	Soil	AWIMTAGRRAGGAVALTGLVTFLMLFGLASSPVPFDVPVLDRIADIGLLSLYTVGATTLLLPPTDPRWPAAMTGSSAHIS
Ga0318561_106323122	3300031679	Soil	TGLVTFLMLFGLTTSPTQFEVPVLDRIADIFVLSLYTIGSTALLLPPPGPRVPAAIVSGSAQIS
Ga0318574_107611851	3300031680	Soil	PGGAVALTGLVTFLMLFGLAAAPTPFEVPVLDRVADIFVLSLYTIATTALLLPPTHPQWSTAAAGSSAHLS
Ga0318572_100725433	3300031681	Soil	IMTAGRRPGGAVALTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Ga0318560_103240932	3300031682	Soil	LVTFLMLFGLAAAPTPFEVPVLDRVADIFVLSLYTIATTALLLPPTHPQWSTAAAGSSAHLS
Ga0318496_108030722	3300031713	Soil	VALTGLVTFLMLFGFAAAPIPFDVPVLDRIADIGLLSLYTVGATTLLLPPSDPRSPAATAGIPAHISPSRSVE
Ga0306917_101016643	3300031719	Soil	RRPGGAVALTGLVTFLMLFGLAAAPTPFEVPVLDRVADIFVLSLYTIATTALLLPPTHPQWSTAAAGSSAHLS
Ga0318493_103195762	3300031723	Soil	GGTVALTGLVTFLMLFGLAASRLSLDVPVLDRVADIFVLSLYTIGATALLLPLPPEPRGPTATTGSPARIA
Ga0318500_106760641	3300031724	Soil	IMRPGRPGRAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQWPAMAGSPGHIS
Ga0318501_100913832	3300031736	Soil	MIRGRRPGGAVALTGLVTFLMLFGLSASPTAFEVPVLDRIADIFVLSLYTIGTTALLLPPPAPRVPAAMAGGSAHIS
Ga0306918_103433891	3300031744	Soil	TRGRRAGGAVALTGLVTFLMLFGLAAAPVPFEVPVLDRIADIFVLSLYTIGTTALFLPAPGPRHPAAMATRSAHIS
Ga0318502_102190182	3300031747	Soil	MIRGRRPGGTVALTGLVTFLMLFGLAASRLSLDVPVLDRVADIFVLSLYTIGATALLLPLPPEPRGPTATTGSPARIA
Ga0318492_106841541	3300031748	Soil	VALSGLVTFLMLFGLAASPTQFDVPVLDRIADIFVLSLYTIGAAALLLTPREPRWPTATVGRSADG
Ga0318494_100571153	3300031751	Soil	GWIMRPGRPGRAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQWPAMAGSPGHIS
Ga0318537_103949132	3300031763	Soil	RGRRPGGAVALTGLVTFLMLFGLSASPTSFEVPVLDRIADIFVLSLYTIGTTALLLPAPAPRVPAAMAVRSAHIS
Ga0318509_103379691	3300031768	Soil	SGLVTFLMLFGLAASPTQFDVPVLDRIADIFVLSLYTIGAAALLLTPREPRWPTATVGRSADG
Ga0318526_100172981	3300031769	Soil	TGWIMRPGRPGRAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQWPAMAGSPGHIS
Ga0318526_104131401	3300031769	Soil	WIMIRGRRPGGAVALTGLVTFLMLFGLSASPTAFEVPVLDRIADIFVLSLYTIGTTALLLPPPAPRVPAAMAGGSAHIS
Ga0318521_104734831	3300031770	Soil	LVTFLILFGLAASPTQFDVPVLDRVADIFVLSLYTIGAAALLLTPREPRWPTATVGRSAD
Ga0318566_101581791	3300031779	Soil	TGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0318566_103035411	3300031779	Soil	ISAGRRPGGAVALTGLVTFLMLFGLAASPTPFEVPVLDRIADIFLLSLYTVAAAALLLPPDPRWSANTAGSPAHIS
Ga0318508_10163991	3300031780	Soil	SSGRRPGHAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGVLSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0318547_100653551	3300031781	Soil	TFLMLFGLAASPTPFEVPVLDRIADIFLLSLYTVAAAALLLPPDPRWSANTAGSPAHIS
Ga0318552_102021611	3300031782	Soil	MSRGRRPGGAVALTGLVTFLMLFGLSASPTSFEVPVLDRIADIFVLSLYTIGTTALLLPAPAPRVPAAMAVRSAHIS
Ga0318552_106360221	3300031782	Soil	MTGGRRAGGAVALTGLVTFLMLFGLAAAPIPFDIPVLDRIADIGLVSLYTVGATTLLLPPRDPRRPATMAAGSAHVS
Ga0318529_100099821	3300031792	Soil	RPGRPGRAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0318529_103458962	3300031792	Soil	LTGLVTFLMLFGLAASPTPFEVPVLDRIVDIFMLSLYTVAAAALLLPPDPRWSANTAGSPAHIS
Ga0318576_102465481	3300031796	Soil	PGGAVALTGLVTFLMLFGLAAAPTPFEVPVLDRVADIFVLSLYTIATTALLLPPTHPQWSTAAAGSLAHFS
Ga0318568_102476142	3300031819	Soil	LFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0318567_100808363	3300031821	Soil	LVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0318499_102984032	3300031832	Soil	TSAGRRPGGAVALTGLATFLMLFGLAASPTPFEVPVLDRIVDIFMLSLYTVAAAALLLPPDPRWSANTAGSPAHIS
Ga0310917_109106541	3300031833	Soil	GAVALTGLVTFLMLFGLTASPTQFEVPVLDRIADIGVLSLYTIGATELLLPPPKPRWPAATAGRSAHIS
Ga0318511_100181204	3300031845	Soil	AGWIMSSGRRPGHAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGVLSLYTVGATALLLSPDSQGPAMAGSPGHIS
Ga0318544_100242774	3300031880	Soil	RWIMTAGRRPGGAVALTGLVTFLMLFGLAAAPTPFEVPVLDRVADIFVLSLYTIATTALLLPPTHPQWSTAAAGSSAHLS
Ga0306925_100998451	3300031890	Soil	RGQRPGGAVALTGLVTFLMLFGLTASPTQFEVPVLDRIADIFVLSLYTIGTTALLLPPPDPRWSAAMAHPSAQIS
Ga0318536_101621222	3300031893	Soil	IITKGRRQGGAVALTGLVTFVMLFGFAASPVPFDVPVLDRIVDIFVLSLYTVGATTLLLPPPDPRRPAAVAPHSAHIS
Ga0310912_113582691	3300031941	Soil	SQGPRPGGAVALTGLVTFLMLFGLAASRLSTDVPVLDRVADIFVLSLYTIGATALLLPPSGPRGPTPTTGSPAHIA
Ga0310910_101705403	3300031946	Soil	VALTGLVTFLMLFGLSASPTSFEVPVLDRIADIFVLSLYTIGTTALLLPAPAPRVPAAMAVRSAHIS
Ga0310910_103868642	3300031946	Soil	WIMTAGRPAGGAVALTGLVTFLMLFGLASSPVPFDVPVLDRIADIGLLSLYTVGATTLLLPPTDPQWPAAMTGSSAHIS
Ga0318530_101912122	3300031959	Soil	LMLFGLAASPTPFEVPVLDRIVDIFMLSLYTVAAAALLLPPDPRWSANTAGSPAHIS
Ga0306922_101366144	3300032001	Soil	RAGGAVALTGLVTFLMLFGLAAAPIPFDIPVLDRIADIGLVSLYTVGATTLLLPPRDPRRPATMAAGSAHVS
Ga0318563_101460891	3300032009	Soil	GRRPGHAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQWPAMAGSPGHIS
Ga0318507_102033361	3300032025	Soil	TGARRPGGAVALTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Ga0318507_103767071	3300032025	Soil	ALSGLVTFLILFGLAASPTQFDVPVLDRVADIFVLSLYTIGAAALLLTPREPRWPTATVGRSADG
Ga0318545_100073571	3300032042	Soil	MSSGWRPGRAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGVLSLYTVGATALLLPPDSQWPAMAGSPGHIS
Ga0318556_100414411	3300032043	Soil	GGTVALTGLVTFLMLFGLAASPTAFEVPVLDRIADIFVLSLYTIGTTALLLPAPEPRVPAAMAGRSAHIS
Ga0318556_106703962	3300032043	Soil	RAGGAVALTGLVTFLMLFGLAAAPVPFEVPVLDRIVDIFVLSLYTVGATTLLLPLPDPRRPATMAARSAHGS
Ga0318533_104314831	3300032059	Soil	GWIMTAGRRPGGAVALTGLVTFLMLFGLVASPVPFDVPVLDRITDIGVLSLYTVGATALLLPPPDPRWPAAMAGRSAHIS
Ga0318505_101476711	3300032060	Soil	RAVALTGLVTFLMLFGIAASPVPFDVPVLDRIADIGVLSLYTVGATALLLPPDSQGPAMAGSPGHIS
Ga0318504_104950752	3300032063	Soil	AGRPAGGAVALTGLVTFLMLFGLASSPVPFDVPVLDRIADIGLLSLYTVGATTLLLPPTDPRWPAAMTGSSAHIS
Ga0318504_106263581	3300032063	Soil	GAVALTGLVTFLMLFGLTASPTSFEVPVLDRIADIFVLSLYTIGTTALLLPPPEPRAPAVMAGGSAQIS
Ga0318513_101984721	3300032065	Soil	RPGGAVALTGLVTFLMLFGLSASPTAFEVPVLDRIADIFVLSLYTIGTTALLLPPPAPRVPAAMAGGSAHIS
Ga0318577_101983931	3300032091	Soil	SSQGPRPGGAVALTGLVTFLMLFGLAASRLSTDVPVLDRVADIFVLSLYTIGATALLLPPSGPRGPTPTTGSPAHIA
Ga0318577_105975862	3300032091	Soil	IMSRGRRPGGAVALTGLVTFLMLFGLSASPTSFEVPVLDRIADIFVLSLYTIGTTALLLPAPAPRVPAAMAVRSAHIS
Ga0306920_1006347832	3300032261	Soil	MALLGSLGFAGWIMSSGRRPGHAVALTGLVTFLMLFGLAASPVPFDVPVLDRIADIGALSLYTVGATALLLPPDSQGPAMAGSPGHIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094745

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences