NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F094763

Metagenome / Metatranscriptome Family F094763

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094763
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 53 residues
Representative Sequence EGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLHHTKAGI
Number of Associated Samples 87
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.00 %
% of genes near scaffold ends (potentially truncated) 83.81 %
% of genes from short scaffolds (< 2000 bps) 83.81 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (68.571 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog
(22.857 % of family members)
Environment Ontology (ENVO) Unclassified
(56.190 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.952 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 8.54%    β-sheet: 25.61%    Coil/Unstructured: 65.85%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF03976PPK2 16.19
PF00690Cation_ATPase_N 12.38
PF09364XFP_N 3.81
PF05239PRC 1.90
PF11897DUF3417 1.90
PF00654Voltage_CLC 1.90
PF00999Na_H_Exchanger 1.90
PF03699UPF0182 1.90
PF02482Ribosomal_S30AE 1.90
PF00924MS_channel 1.90
PF14520HHH_5 0.95
PF04041Glyco_hydro_130 0.95
PF10415FumaraseC_C 0.95
PF00274Glycolytic 0.95
PF03332PMM 0.95
PF01609DDE_Tnp_1 0.95
PF00266Aminotran_5 0.95
PF03446NAD_binding_2 0.95
PF03965Penicillinase_R 0.95
PF02518HATPase_c 0.95
PF09851SHOCT 0.95
PF13007LZ_Tnp_IS66 0.95
PF02874ATP-synt_ab_N 0.95
PF00702Hydrolase 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 16.19
COG0474Magnesium-transporting ATPase (P-type)Inorganic ion transport and metabolism [P] 12.38
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 1.90
COG0038H+/Cl- antiporter ClcAInorganic ion transport and metabolism [P] 1.90
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 1.90
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 1.90
COG1544Ribosome-associated translation inhibitor RaiATranslation, ribosomal structure and biogenesis [J] 1.90
COG1615Uncharacterized membrane protein, UPF0182 familyFunction unknown [S] 1.90
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 1.90
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 1.90
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 1.90
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 1.90
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 0.95
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.95
COG2152Predicted glycosyl hydrolase, GH43/DUF377 familyCarbohydrate transport and metabolism [G] 0.95
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.95
COG3293TransposaseMobilome: prophages, transposons [X] 0.95
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.95
COG3588Fructose-bisphosphate aldolase class 1Carbohydrate transport and metabolism [G] 0.95
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 0.95
COG5421TransposaseMobilome: prophages, transposons [X] 0.95
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.95
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A68.57 %
All OrganismsrootAll Organisms31.43 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300009519|Ga0116108_1165439All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300009618|Ga0116127_1117820Not Available685Open in IMG/M
3300009623|Ga0116133_1001035All Organisms → cellular organisms → Bacteria8327Open in IMG/M
3300009628|Ga0116125_1071166Not Available904Open in IMG/M
3300009629|Ga0116119_1052999Not Available1048Open in IMG/M
3300009641|Ga0116120_1037927All Organisms → cellular organisms → Bacteria → Acidobacteria1691Open in IMG/M
3300009641|Ga0116120_1051055Not Available1422Open in IMG/M
3300009762|Ga0116130_1270437All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae542Open in IMG/M
3300009764|Ga0116134_1207188Not Available681Open in IMG/M
3300010379|Ga0136449_104035097All Organisms → cellular organisms → Bacteria → Proteobacteria548Open in IMG/M
3300010379|Ga0136449_104071461Not Available545Open in IMG/M
3300010379|Ga0136449_104218250Not Available533Open in IMG/M
3300014152|Ga0181533_1013944All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium5742Open in IMG/M
3300014152|Ga0181533_1228396Not Available704Open in IMG/M
3300014158|Ga0181521_10185816Not Available1153Open in IMG/M
3300014159|Ga0181530_10355891All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300014165|Ga0181523_10263220All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300014490|Ga0182010_10626213Not Available602Open in IMG/M
3300014490|Ga0182010_10869080Not Available513Open in IMG/M
3300014491|Ga0182014_10015340All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6973Open in IMG/M
3300014491|Ga0182014_10020516All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium5619Open in IMG/M
3300014491|Ga0182014_10325671Not Available782Open in IMG/M
3300014491|Ga0182014_10520299Not Available581Open in IMG/M
3300014491|Ga0182014_10564866Not Available553Open in IMG/M
3300014492|Ga0182013_10521851Not Available615Open in IMG/M
3300014498|Ga0182019_10074113Not Available2026Open in IMG/M
3300014498|Ga0182019_11206514All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300014654|Ga0181525_10432115Not Available725Open in IMG/M
3300014839|Ga0182027_10449165Not Available1420Open in IMG/M
3300014839|Ga0182027_10543262All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300016705|Ga0181507_1289328Not Available506Open in IMG/M
3300016750|Ga0181505_10774467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia bannensis521Open in IMG/M
3300017935|Ga0187848_10430736Not Available542Open in IMG/M
3300017938|Ga0187854_10131973All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1146Open in IMG/M
3300017940|Ga0187853_10480120Not Available544Open in IMG/M
3300017948|Ga0187847_10432382Not Available725Open in IMG/M
3300017988|Ga0181520_10269791Not Available1290Open in IMG/M
3300017988|Ga0181520_10382376Not Available1026Open in IMG/M
3300018009|Ga0187884_10157615Not Available954Open in IMG/M
3300018014|Ga0187860_1346619Not Available566Open in IMG/M
3300018016|Ga0187880_1187694Not Available945Open in IMG/M
3300018033|Ga0187867_10806236Not Available509Open in IMG/M
3300018038|Ga0187855_10128817Not Available1517Open in IMG/M
3300018038|Ga0187855_10267206Not Available1003Open in IMG/M
3300018043|Ga0187887_10188218Not Available1229Open in IMG/M
3300018043|Ga0187887_10757755Not Available574Open in IMG/M
3300018043|Ga0187887_10938101Not Available512Open in IMG/M
3300018044|Ga0187890_10374596Not Available798Open in IMG/M
3300018057|Ga0187858_10491858Not Available751Open in IMG/M
3300019082|Ga0187852_1352131All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300019787|Ga0182031_1203532Not Available895Open in IMG/M
3300022524|Ga0224534_1002023All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9970Open in IMG/M
3300022830|Ga0224515_1050117Not Available575Open in IMG/M
3300023088|Ga0224555_1087458All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans1006Open in IMG/M
3300023090|Ga0224558_1157213All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae723Open in IMG/M
3300023090|Ga0224558_1171139Not Available678Open in IMG/M
3300025857|Ga0209014_10024974All Organisms → cellular organisms → Bacteria2823Open in IMG/M
3300025878|Ga0209584_10160719Not Available849Open in IMG/M
3300026451|Ga0247845_1064795All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300028070|Ga0255353_1003306All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum7333Open in IMG/M
3300028090|Ga0255349_1100034Not Available523Open in IMG/M
3300028566|Ga0302147_10254688Not Available585Open in IMG/M
3300028572|Ga0302152_10203136Not Available641Open in IMG/M
3300028574|Ga0302153_10058666Not Available1293Open in IMG/M
3300028745|Ga0302267_10043113All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium → Chromobacterium sphagni2648Open in IMG/M
3300028766|Ga0302269_1056653Not Available1205Open in IMG/M
3300028779|Ga0302266_10114579Not Available1085Open in IMG/M
3300028781|Ga0302223_10319166All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300028783|Ga0302279_10259911Not Available782Open in IMG/M
3300028860|Ga0302199_1004256All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum6571Open in IMG/M
3300028867|Ga0302146_10330230Not Available587Open in IMG/M
3300028873|Ga0302197_10034921All Organisms → cellular organisms → Bacteria3024Open in IMG/M
3300029883|Ga0311327_10102437All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum2108Open in IMG/M
3300029883|Ga0311327_10214326Not Available1306Open in IMG/M
3300029911|Ga0311361_11206716Not Available604Open in IMG/M
3300029914|Ga0311359_11142424Not Available514Open in IMG/M
3300029915|Ga0311358_10399905Not Available1111Open in IMG/M
3300029918|Ga0302143_1040290Not Available1072Open in IMG/M
3300029982|Ga0302277_1161292All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → Uliginosibacterium gangwonense909Open in IMG/M
3300029988|Ga0302190_10263045Not Available686Open in IMG/M
3300030004|Ga0302186_10331540Not Available505Open in IMG/M
3300030011|Ga0302270_10334589Not Available823Open in IMG/M
3300030044|Ga0302281_10349881Not Available579Open in IMG/M
3300030503|Ga0311370_10407252All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300031241|Ga0265325_10427360All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404578Open in IMG/M
3300031261|Ga0302140_10477805All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → Uliginosibacterium gangwonense975Open in IMG/M
3300031788|Ga0302319_10755208Not Available973Open in IMG/M
3300031788|Ga0302319_11121125Not Available736Open in IMG/M
3300032676|Ga0316229_1168358Not Available877Open in IMG/M
3300033004|Ga0335084_11272453Not Available733Open in IMG/M
3300033402|Ga0326728_10347885All Organisms → cellular organisms → Bacteria → Acidobacteria1308Open in IMG/M
3300033405|Ga0326727_11135102Not Available552Open in IMG/M
3300033818|Ga0334804_141336Not Available601Open in IMG/M
3300033822|Ga0334828_051248All Organisms → cellular organisms → Bacteria → Proteobacteria1134Open in IMG/M
3300033887|Ga0334790_210665Not Available553Open in IMG/M
3300033888|Ga0334792_129482Not Available663Open in IMG/M
3300033891|Ga0334811_189079Not Available500Open in IMG/M
3300034065|Ga0334827_145570Not Available741Open in IMG/M
3300034163|Ga0370515_0142965All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1026Open in IMG/M
3300034282|Ga0370492_0312348Not Available638Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog22.86%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland17.14%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil14.29%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog8.57%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland8.57%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog6.67%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen5.71%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.86%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.90%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.90%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.90%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.90%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.90%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.90%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater0.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300009519Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150EnvironmentalOpen in IMG/M
3300009618Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009629Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100EnvironmentalOpen in IMG/M
3300009641Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150EnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016705Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018014Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300022524Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24EnvironmentalOpen in IMG/M
3300022830Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25EnvironmentalOpen in IMG/M
3300023088Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34EnvironmentalOpen in IMG/M
3300023090Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24EnvironmentalOpen in IMG/M
3300023258Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34EnvironmentalOpen in IMG/M
3300025857Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)EnvironmentalOpen in IMG/M
3300025878Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)EnvironmentalOpen in IMG/M
3300026451Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25EnvironmentalOpen in IMG/M
3300028070Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25EnvironmentalOpen in IMG/M
3300028090Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15EnvironmentalOpen in IMG/M
3300028566Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2EnvironmentalOpen in IMG/M
3300028572Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1EnvironmentalOpen in IMG/M
3300028574Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2EnvironmentalOpen in IMG/M
3300028745Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3EnvironmentalOpen in IMG/M
3300028766Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2EnvironmentalOpen in IMG/M
3300028779Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2EnvironmentalOpen in IMG/M
3300028781Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028860Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3EnvironmentalOpen in IMG/M
3300028867Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3EnvironmentalOpen in IMG/M
3300028873Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1EnvironmentalOpen in IMG/M
3300029883I_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029914III_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300029915III_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029918Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1EnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029982Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1EnvironmentalOpen in IMG/M
3300029988Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3EnvironmentalOpen in IMG/M
3300029994Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4EnvironmentalOpen in IMG/M
3300030004Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1EnvironmentalOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030044Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031261Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1EnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300032676Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033818Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-MEnvironmentalOpen in IMG/M
3300033822Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9EnvironmentalOpen in IMG/M
3300033887Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1EnvironmentalOpen in IMG/M
3300033888Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1EnvironmentalOpen in IMG/M
3300033891Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-DEnvironmentalOpen in IMG/M
3300034065Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0116108_116543913300009519PeatlandMVGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRVNLHQTKAGI*
Ga0116127_111782013300009618PeatlandMLGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLYHTKTGI*
Ga0116133_100103513300009623PeatlandLEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTGWVQSVSWPDFRVYLDHMKAGI*
Ga0116125_107116613300009628PeatlandIMDEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGL*
Ga0116119_105299923300009629PeatlandFVMDEASWHLGYLDVKSGDWLHNRSVLVPTGWVQSVSWPDFRVYLDHMKAGI*
Ga0116120_103792733300009641PeatlandAVWHIGYLDVKTGDWLQSRSALVPTSWVKSISWADHRVILQHARERI*
Ga0116120_105105533300009641PeatlandRLEGFIMDEASWHLGYLEVKTGDWLNGRSVLVPTRWVKSVFWDDHRVSLHHTRAGV*
Ga0116130_127043713300009762PeatlandASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGI*
Ga0116134_120718823300009764PeatlandEGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLHHTKTGI*
Ga0136449_10403509723300010379Peatlands SoilSWHLGYLDVKAGDWLHSRSVLVPTRWVNSVSWADHRVNLHHAQERI*
Ga0136449_10407146113300010379Peatlands SoilVAWHLGYLDVKAGDWLYNRSVLVPTRWVHSVSWADRRVNLDHAQT*
Ga0136449_10421825013300010379Peatlands SoilMLGYHVWASDGEFGVLEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTSWVQSVSWADFRVHLHHTKAGM*
Ga0181533_101394413300014152BogGFVMDEASWHLGYLDVKSGDWLKNRSVLVPTRWVQSVSWTEFRIHLHHTKTGI*
Ga0181533_122839613300014152BogMDDASWHLGYLDVKAGDWLYSRSVLVPTRWVKSISWADRRVNLHHTQGAL*
Ga0181521_1018581613300014158BogLEGLIMDEASWHLGYLDVKAGDWLRNRSVLIPTLWVNSVSWADCRINLHHSRDGI*
Ga0181530_1035589113300014159BogHIGYLDVKAGDWLHSRSVLVPTRWVESISWADDRVHLHHTPEKA*
Ga0181523_1026322013300014165BogEASWHLGYLDVKSGDWLQNRSVLVPTDWVQSVSWPDFRVYLDHTKAGI*
Ga0181528_1004181213300014167BogKAGDWLHSRSVLVPTRWVKSISWADNRISLNHSLKEG*
Ga0182010_1062621313300014490FenFGILDDFVMDELSWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA*
Ga0182010_1086908023300014490FenVVDDAVWHIGYLDVKTGEGLESRSVLVPTSWVKSISWADHRVNLQGSRERI*
Ga0182014_1001534013300014491BogLEGFIMNDASWHLAYLDVTAGDWLHNRPVLVPTSSVTFVSWANHRVNLQQARERI*
Ga0182014_1002051663300014491BogMDEASWHLGYVDVKAGDWLLSRSVLIPTHWVKSISWANLRINLHHSRDGI*
Ga0182014_1032567133300014491BogEASWHLGYLDVKTGDWLHGRSVLIPTRWVKSISWADLKINLHHSRDGI*
Ga0182014_1052029923300014491BogASWHLGYLDVKAGDWLLNRSVLIPTRWVKSVSWADLRINLHHSREGI*
Ga0182014_1056486613300014491BogWHLGYLDVKAGDWLLGRSVLIPTRWVKSISWANLRINLHHTKDGI*
Ga0182013_1052185123300014492BogGYLDVKTGDWLHGRSVLIPTRWVKSISWADLKINLHHSRDGI*
Ga0182019_1007411333300014498FenMDEASWRLGYLDVKAGDWLLNRSVLVPTLWVKSVSWADCRINLHHSRDVI*
Ga0182019_1120651423300014498FenWDLAGYEVWDTNGEFGRLEGFIMDEASWHLGYLDVKAGDWLNSRSVLVPTRWVNSVSWADHRVNLQQARERI*
Ga0181525_1043211513300014654BogMLGYQVWATDGDFGILEGFVMDEASWHLGYLDVKSGVWLQNRSVLVPTRWVQSVSWADFRVNLHHTNPGI*
Ga0182027_1044916523300014839FenMDDASWHLGYLDVKAGDWLYSRSVLVPTRWVKSISWADRRVNVHHAQGAL*
Ga0182027_1054326213300014839FenGFIVDDASWHLGYLDVKTGDWLHSRSVLVPTRSVESISWAHRRVDLKKETRERI*
Ga0181507_128932813300016705PeatlandGEFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVQSVSWAEFRIHLHHTKAGT
Ga0181505_1077446723300016750PeatlandEIGRVEGFIMDDASWHLGYLDVKAGDWFHNRSVLVPTRWVNSVSWADHRVNLHHAQA
Ga0187848_1043073613300017935PeatlandATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWAEFRIHLHHTKAGT
Ga0187854_1013197333300017938PeatlandASWHLGYLEVKTGEWLHSRSLLVPTRWVKSVSWANRRVNLHHTREGV
Ga0187853_1048012023300017940PeatlandVWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRVNLHQTKAGI
Ga0187847_1043238223300017948PeatlandGILEGFVMDEASWHLGYLDVRSGDWLHNRSVLIPTRSVESVSWAEFRIQLHHTKVGTEVERELDPAAISREGIERNLQNGY
Ga0181520_1026979123300017988BogDGDFGILEGFVLDEASWHLGYLDVKSGYWLQNRSVLVPTRWVESVSWAEFRIHLHDTKAG
Ga0181520_1038237633300017988BogMGRLEGFIMDEASWHLGYLEVKTGDWLNDRSVLVPTRWVKSVFWDDHRVSLHHTRAGV
Ga0187884_1015761523300018009PeatlandGFIMDDASWHLGYLDVKAGEWIFSRSVLVPTRWVKSISWADRRVNLHHTQGAL
Ga0187860_134661913300018014PeatlandGFIMNDASWHLAYLDVTAGDWLHNRPVLVPTSSVTFVSWADHRVNLQRARERI
Ga0187880_118769413300018016PeatlandHVWATDGDFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVQSVSWAEFRIHLHHTKAGT
Ga0187867_1080623613300018033PeatlandFIMDDASWHLGYLNVKAGDWLYSRSVLVPTRWVKSISWADRRVNLHHTQVAFKAP
Ga0187855_1012881733300018038PeatlandSWHLGYLEVKTGDWLNGRSVLVPTRWVKSVFWDDHRVSLHHTRAGV
Ga0187855_1026720623300018038PeatlandEGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLHHTKAGI
Ga0187887_1018821823300018043PeatlandSHMLGYQVWATDGDFGTLEGFVMDEASWHLGYLDVRSGDWLHNRSVLVPTRWVQSVSWAEFRIHLHHTKAGT
Ga0187887_1075775523300018043PeatlandYHVWATDGDFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVESVSWAEFRIQLHRTKAGTEVERELHPIEHL
Ga0187887_1093810123300018043PeatlandGRVEGFIMDDASWHLGYLDVKAGDWLHNRSVLVPTRWVNSVSWANHRVNLHHAQA
Ga0187890_1037459633300018044PeatlandGRVEGFIMDDASWHLGYLDVKAGDWLHSRSVLVPTRWVNSVSWADHRVNLHHAQA
Ga0187858_1049185813300018057PeatlandSWHLGYLDVKAGDWLHNRSVLIPTRWVNSVSWADHRVNLHHAQA
Ga0187852_135213123300019082PeatlandEFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVQSVSWAEFRIHLHHTKAGT
Ga0182031_120353213300019787BogGLIMDEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0224534_100202343300022524SoilMDEASWHLGYVDVKAGDWLLSRSVLIPTHWVKSISWANLRINLHHSRDGI
Ga0224515_105011713300022830SoilLEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWIQSVSWADFRVNLHQTKAGI
Ga0224555_108745813300023088SoilRLEGFVLDEAPWHLAYLDVKAGDWLLCRSVLIPTRWAQSISWANHRVNLHHTRKGV
Ga0224558_115721313300023090SoilHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGI
Ga0224558_117113913300023090SoilYLDVKAGEWIFSRSVLVPTRWVKSISWADRRVNLHHTQGAL
Ga0224535_109455713300023258SoilLDVKAGDWLLNRSVLIPTRWVKSVSWADLRINLHHSREGI
Ga0209014_1002497443300025857Arctic Peat SoilMDDASWHLGYLDVKAGDWLNSRSVLVPTRWVNSISWAEHRVNLHHAQERI
Ga0209584_1016071923300025878Arctic Peat SoilHLLGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQSRSVLVPTRWVQSVSWTEFRIHLHHTKGGT
Ga0247845_106479523300026451SoilVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWIQSVSWADFRVNLHQTKAGI
Ga0255353_100330613300028070SoilDEASWHLGYLDVKCGDWLQNRSVLVPTGWVQSVSWADFVIQLHHPMV
Ga0255349_110003423300028090SoilEDFVMDEASWHLGYLDVKSGSSLQNRSVLVPTRWVESVSWTEFRIHLHHTRTA
Ga0302147_1025468813300028566BogWHLGYLDVKSGDWLHNRSVLVPTGWVESVSWADFVIQLHHLMA
Ga0302152_1020313623300028572BogLEGFVMDEASWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA
Ga0302153_1005866633300028574BogLGYLDVKAGDWLLTRSVLIPTRWVKSVSWADCRVNLHHGKDGI
Ga0302267_1004311313300028745BogIMDEASWHLGYLDVKAGDWLHSRSMLIPTRSVKSISWADHRVNLHHSRDGI
Ga0302269_105665343300028766BogSLILDEATWHLGYLDVKAGDWLLCRSVLIPTRWIESVSWADCRINLHHCRDGI
Ga0302266_1011457913300028779BogLEGFVMDEDSWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA
Ga0302223_1031916623300028781PalsaRLQGFIMDESSWNLGYLEVKAGDWLHCRSVLIPTSWVESVSQANHRVNLHRTCTEV
Ga0302279_1025991113300028783BogLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0302199_100425613300028860BogSHMLGYHVWATDGDFGMLEGFVMDEADWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRINLHHTRAGI
Ga0302146_1033023023300028867BogIMDEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0302197_1003492113300028873BogDGEVGRVEGFIMDDASWHLGYLDVKAGDWLHNRSVLVPTRWVNSVSWANHRVNLHHAQA
Ga0311327_1010243713300029883BogGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRVNLHHTKTGI
Ga0311327_1021432623300029883BogDEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0311361_1120671613300029911BogATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTGWVQSVSWADFVIQLHHPM
Ga0311359_1114242423300029914BogASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGI
Ga0311358_1039990523300029915BogDFVVDEASWHLGYLDVKSGDWLQNRSVLVPTSLVQSVSWADFRIHLHHTRAGI
Ga0302143_104029013300029918BogFVMDEASWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA
Ga0311346_1142238523300029952BogAGDWLLGRSVLIPTRWVKSISWANLRINLHHSKDGI
Ga0302277_116129223300029982BogDEASWHLGYLDVKGGDWLQNRSVLVPTGWVQSVSWPDFRVYLDHTKTGI
Ga0302190_1026304513300029988BogGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0302283_134141013300029994FenGDWLRDRSVLIPTRWVESVSWADRRVNVQHSRSGL
Ga0302186_1033154023300030004BogILEGFVMDETSWHLGYLDVKSGDWLRSRSVLVPTRWVQSVSWTEFRIHLHHTKAGT
Ga0302270_1033458923300030011BogGLIMDEASWHLGYLDVKAGDWLHSRSMLIPTRSVKSISWADHRVNLHHSRDGI
Ga0302281_1034988123300030044FenSTSHMLGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTGWVQSVSWADFVIQLHHPMA
Ga0311370_1040725233300030503PalsaVMDEATWHLAYLDVKSGDWLQNRSVLAPTGWVRSVSWPDFRVYLDHTKAGIWASGFP
Ga0265325_1042736013300031241RhizosphereRSVWHLTGYDVWAPEIEIGRLEGFVMDDASWHLSYLDVKAGDWLHSRSVLVPTRWVKYISWAEHRVHLERGRGHI
Ga0302140_1047780513300031261BogLEGFVMDEASWHLGYLDVKGGDWLQNRSVLVPTGWVQSVSWPDFRVYLDHTKTGI
Ga0265316_1040163823300031344RhizosphereAGDWLHGRSVLIPTRWVKSISWADLKINLNHSRDGI
Ga0302319_1075520823300031788BogFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFVIQLHHPMA
Ga0302319_1112112513300031788BogFVLDEASWHLGYLEVKAGEWLLCHSVLVPTRWVKSVSWADHRVNLHHTRKGV
Ga0316229_116835813300032676FreshwaterWHLGYLEVKAGEWLHSHSLLVPTRWVKSISWANRRVNLHHTREGV
Ga0335084_1127245313300033004SoilFIVDETSWHLGYLDVKAGDWLYSRSVLIPTQWVKSISWADHRVNLRRTSKA
Ga0326728_1034788523300033402Peat SoilFVVDDAVWHIGYLDVKTGEGLQSRSVLVPTSWVKSISWADHHVNLQGSRERI
Ga0326727_1113510213300033405Peat SoilLEGLIMDEASWHLGYLDVKAGDWLHSRSMLIPTRWVKSISWADLRINLHHSREEI
Ga0334804_141336_436_5883300033818SoilMDEASWHLGYLDVKAGDWLHGRSVLIPTRWVKSISWADLRINLHHSRDGI
Ga0334828_051248_986_11323300033822SoilMDDASWHLGYLDVKAGDWLHNRSVLVPTRWVNSVSWANHRVNLHHAQA
Ga0334790_210665_361_5523300033887SoilGRVDGFIMDDASWHLGYLDVKAGDWLHSRSILVPTRWVNSVSWADHRVNLHHTQAWTGTLKAS
Ga0334792_129482_8_1783300033888SoilMDDASWHLGYLDVKSGDWLHSRSVLVPTCWVNSVSWADHRVNLHRAQAWTGTLKAS
Ga0334811_189079_355_4983300033891SoilASWHLGYLDVKAGDWLLGRSVLIPTRWVKSISWANLRINLHHSKDGI
Ga0334827_145570_510_7223300034065SoilMLGYHVWATDGDFGMLEGFVMDEADWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRINLHHTRAGI
Ga0370515_0142965_1_1593300034163Untreated Peat SoilFVMDEASWHLGYLDVKSGAWLQNRSVLVPTRWVQSVSWADFRVNLHHTKTGI
Ga0370492_0312348_411_5633300034282Untreated Peat SoilMDEASWHLGYLDVKAGDWLQSRSVLIPTRWVKSISWADLRINLHHSRDGI


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