Metagenome Family F094811

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094811
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	54 residues
Representative Sequence	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLER
Number of Associated Samples	84
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	65.71 %
% of genes from short scaffolds (< 2000 bps)	49.52 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (21.905 % of family members)
Environment Ontology (ENVO)	Unclassified (29.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (31.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.06% β-sheet: 0.00% Coil/Unstructured: 52.94%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF12840	HTH_20	46.67
PF00561	Abhydrolase_1	9.52
PF13411	MerR_1	8.57
PF08327	AHSA1	4.76
PF12697	Abhydrolase_6	1.90
PF10604	Polyketide_cyc2	1.90
PF08044	DUF1707	0.95
PF13473	Cupredoxin_1	0.95
PF00196	GerE	0.95
PF01814	Hemerythrin	0.95
PF02909	TetR_C_1	0.95
PF12770	CHAT	0.95
PF06353	DUF1062	0.95
PF00266	Aminotran_5	0.95
PF01042	Ribonuc_L-PSP	0.95
PF00950	ABC-3	0.95
PF12681	Glyoxalase_2	0.95
PF05694	SBP56	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.95
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	0.95
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	0.95
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.95
COG4332	Uncharacterized conserved protein, DUF1062 domain	Function unknown [S]	0.95
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.90 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.95 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.95 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Saccharopolyspora phatthalungensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora phatthalungensis	0.95 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102332702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora phatthalungensis	1468	Open in IMG/M
3300003373\|JGI25407J50210_10026025	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300003373\|JGI25407J50210_10104889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300003373\|JGI25407J50210_10187370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300004463\|Ga0063356_102711094	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005937\|Ga0081455_10104706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2263	Open in IMG/M
3300005981\|Ga0081538_10128695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1196	Open in IMG/M
3300005981\|Ga0081538_10282967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300005981\|Ga0081538_10365775	Not Available	521	Open in IMG/M
3300005985\|Ga0081539_10050272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2360	Open in IMG/M
3300009094\|Ga0111539_13065195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300009810\|Ga0105088_1107177	Not Available	522	Open in IMG/M
3300009811\|Ga0105084_1031200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300010042\|Ga0126314_11118322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	587	Open in IMG/M
3300010045\|Ga0126311_10204094	Not Available	1443	Open in IMG/M
3300012355\|Ga0137369_10002500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18896	Open in IMG/M
3300014487\|Ga0182000_10671176	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300014965\|Ga0120193_10032120	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300018052\|Ga0184638_1325648	All Organisms → cellular organisms → Bacteria → Terrabacteria group	517	Open in IMG/M
3300018073\|Ga0184624_10203104	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300018076\|Ga0184609_10024039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2447	Open in IMG/M
3300018432\|Ga0190275_10272273	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300018466\|Ga0190268_10715919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300018466\|Ga0190268_11932492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300021078\|Ga0210381_10124678	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300026686\|Ga0208213_100649	Not Available	1172	Open in IMG/M
3300026790\|Ga0208710_101018	Not Available	1440	Open in IMG/M
3300027163\|Ga0209878_1033772	Not Available	664	Open in IMG/M
3300027384\|Ga0209854_1106072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300027511\|Ga0209843_1000784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7172	Open in IMG/M
3300027577\|Ga0209874_1154933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300027750\|Ga0209461_10145604	Not Available	573	Open in IMG/M
3300027809\|Ga0209574_10027759	Not Available	1332	Open in IMG/M
3300027907\|Ga0207428_10001038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30617	Open in IMG/M
3300028590\|Ga0247823_10130355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1922	Open in IMG/M
3300028592\|Ga0247822_10052586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2847	Open in IMG/M
3300028710\|Ga0307322_10004176	All Organisms → cellular organisms → Bacteria	3045	Open in IMG/M
3300028722\|Ga0307319_10126533	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300028744\|Ga0307318_10009987	All Organisms → cellular organisms → Bacteria	3042	Open in IMG/M
3300028771\|Ga0307320_10245609	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300028778\|Ga0307288_10234418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300028812\|Ga0247825_10035129	All Organisms → cellular organisms → Bacteria	3314	Open in IMG/M
3300028814\|Ga0307302_10126651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1229	Open in IMG/M
3300028875\|Ga0307289_10329935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300028876\|Ga0307286_10002884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5050	Open in IMG/M
3300028880\|Ga0307300_10125694	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300028885\|Ga0307304_10102952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1143	Open in IMG/M
3300028889\|Ga0247827_10017716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2898	Open in IMG/M
3300030510\|Ga0268243_1000142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12002	Open in IMG/M
3300030514\|Ga0268253_10048972	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1104	Open in IMG/M
3300031548\|Ga0307408_100348608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1256	Open in IMG/M
3300031824\|Ga0307413_10148735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1629	Open in IMG/M
3300031852\|Ga0307410_10106326	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300031852\|Ga0307410_11551050	Not Available	584	Open in IMG/M
3300031901\|Ga0307406_10110687	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300031901\|Ga0307406_10208500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1444	Open in IMG/M
3300031903\|Ga0307407_10268043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300031903\|Ga0307407_11292226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300031911\|Ga0307412_10011577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5115	Open in IMG/M
3300031911\|Ga0307412_11767623	All Organisms → cellular organisms → Bacteria → Terrabacteria group	568	Open in IMG/M
3300031995\|Ga0307409_101285400	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300032002\|Ga0307416_100972754	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300032004\|Ga0307414_10225606	Not Available	1541	Open in IMG/M
3300032005\|Ga0307411_10836848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	813	Open in IMG/M
3300032005\|Ga0307411_11007265	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300032126\|Ga0307415_100021866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3939	Open in IMG/M
3300032126\|Ga0307415_100035138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3271	Open in IMG/M
3300032159\|Ga0268251_10154775	Not Available	867	Open in IMG/M
3300034131\|Ga0334911_012667	Not Available	1143	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.90%
Host-Associated	Host-Associated	38.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.19%
Plants	Host-Associated → Plants	38.10%
Aquatic	Environmental → Aquatic	5.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.81%
Roots	Host-Associated → Plants → Roots	5.71%
Sediment	Environmental → Aquatic → Sediment	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.81%
Phylloplane	Host-Associated → Plants → Phylloplane	3.81%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.81%
Sand	Environmental → Terrestrial → Soil → Sand	9.52%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Loam	Environmental → Terrestrial → Soil → Loam	3.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.81%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	9.52%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.71%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.81%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.95%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	21.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	9.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	5.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.81%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.86%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300026652	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1117 (SPAdes)	Environmental	Open in IMG/M
3300026686	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1097 (SPAdes)	Environmental	Open in IMG/M
3300026708	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN628 (SPAdes)	Environmental	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1023327024	3300000956	Soil	MSVDADHQVIDSPEALFRHLYEDHQVEEVRDLDPLAAPLHFWLRRHAELERDERERDER
JGI25407J50210_100260251	3300003373	Tabebuia Heterophylla Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPEMAPLQFWLRRHADLERAQRAARRQAEPPGGPE
JGI25407J50210_101048891	3300003373	Tabebuia Heterophylla Rhizosphere	MFSDADHEVIDSPEALFRHLHEEHGVEEAADLDPETAPVQFWIRRHAELERAERSARRQPAPPP
JGI25407J50210_101873702	3300003373	Tabebuia Heterophylla Rhizosphere	MSADADHEVIDSAEALFRHLYEEHGVEEAQDLDPETAPLQFWLRRHADLERAERAARHQPDPPPEP
Ga0063356_1027110941	3300004463	Arabidopsis Thaliana Rhizosphere	MFADADHEVLDSPEALFRHLYDEHGVEEARDLDPETAPLQFWLRRHADLERAQRGPRRQPEPPTRPEPEPG
Ga0066809_102177031	3300005168	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRH
Ga0058697_100778684	3300005562	Agave	MPDELDHEVIDSPQALFRHLYEAHGVIEALDLDPDTAPL
Ga0081455_101047064	3300005937	Tabebuia Heterophylla Rhizosphere	MFSDADHETIDSPEALFRHLYEEHGVEEAVDLDPETAPIQFWLRRHAELER
Ga0081538_101286953	3300005981	Tabebuia Heterophylla Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVSEARDLDPETAPLQFWLRRHAGLERAQ
Ga0081538_102829671	3300005981	Tabebuia Heterophylla Rhizosphere	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAPLQFWLRRHTDLERAQRSTRREPDPEPR
Ga0081538_103657751	3300005981	Tabebuia Heterophylla Rhizosphere	MSADADHEVIDSPEALFRHLYEEHGVSEARDLDPETAPLQFWLRRHTDLERAGRAARRPPDPA
Ga0081540_10906181	3300005983	Tabebuia Heterophylla Rhizosphere	MSADADHEVIDSPEALFRHLYEEHGVTEALELDPETAPIQFWLRRHAELE
Ga0081539_100502721	3300005985	Tabebuia Heterophylla Rhizosphere	MFADADHEVIASPEALFRHLYEEHGVTEALELDPETAPVQFWLRRPAALERAQ
Ga0111539_130651952	3300009094	Populus Rhizosphere	MSTDADHEVIDSPEALFRHLYEEHGVSEARDLDPETAPLHFWLRRHADLERAQSATHPARQPD
Ga0105088_11071771	3300009810	Groundwater Sand	MSTDADHEVIDSPEALFRHLYEVHHVEEALDLDPASAPVQFWLRRHAELEREARIAPRQTEPGPRTP
Ga0105084_10312002	3300009811	Groundwater Sand	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVHFWLRRHAELEREA
Ga0105066_11738841	3300009822	Groundwater Sand	MSTDADHEVIDSPEALFRHLYEVHHVEEALDLDPASAPVHFWLRRH
Ga0105058_10199634	3300009837	Groundwater Sand	MSVDADHQVIDSPEALFRHLYEDHQVEEVRDLDPLAAPLHFWLRRHAELERDERAAAAAGQPRPPAATGQDQGGRPAPPGQQ
Ga0105074_10067552	3300010029	Groundwater Sand	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVQFWLRRHA
Ga0126315_102463273	3300010038	Serpentine Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAP
Ga0126314_111183221	3300010042	Serpentine Soil	MFADADHEVIDSPEALFRHLYEEHGVTEALELDPETAPVQFWLRRHAELERAQR
Ga0126311_102040943	3300010045	Serpentine Soil	MPADADHEVIDSPEALFRHLYEEHGVEEARDLDLETAPLQFWLRRHADLERAQRSARRQ
Ga0120191_100384563	3300012022	Terrestrial	MSVDADHQVIDSPEALFRHLYEDHQVEEVRDLDPLAAPLHFWLR
Ga0137374_103167721	3300012204	Vadose Zone Soil	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVHFWLRR
Ga0137372_100249137	3300012350	Vadose Zone Soil	MPDDFDHEVIDSPEALFRHLHEAHGVTEVLELDPVAAPLQFWLRKHAELE
Ga0137369_100025001	3300012355	Vadose Zone Soil	MSEDADHEVIDSPQALFRHLYEAHHLQEARDLDPYTAPLQFWIRRHNELERAARLGARGRDGEDEAAGTQ
Ga0137368_104600823	3300012358	Vadose Zone Soil	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVHF
Ga0137375_108155231	3300012360	Vadose Zone Soil	MPDDLDHEVIDSPQALFRHLYEAHGLVEALDLNPAT
Ga0137373_104448701	3300012532	Vadose Zone Soil	MPDDLDHEVIDSPQALFRHLYEAHGPVEALDLNPATAPL
Ga0182000_106711762	3300014487	Soil	MSADADHEVIDSPEALFRHLYEAHQVEEALDLDPASAPVQFWLRRHAELEREAGTARRPAEPGP
Ga0120193_100321201	3300014965	Terrestrial	MSADADHEVIDSPEALFRHLYEEHHVEEALDLDPETAPVQFWLRRHAELER
Ga0184634_100560311	3300018031	Groundwater Sediment	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVHFWLR
Ga0184638_13256481	3300018052	Groundwater Sediment	MFSDADHEVIDSPEALIRHLYEEHGVEEARDLDPETAPVQFWLRRHAELER
Ga0184621_100819261	3300018054	Groundwater Sediment	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADL
Ga0184624_102031042	3300018073	Groundwater Sediment	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRAA
Ga0184609_100240391	3300018076	Groundwater Sediment	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLER
Ga0190272_122956021	3300018429	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDVDPETAPLQF
Ga0190275_102722731	3300018432	Soil	MFSDADHEIIDSPEALFRHLYEEHGVEEAADLDPETAPVQFWIRRHAELERAE
Ga0190268_107159191	3300018466	Soil	MFSDADHEVIDSPEALFRHLYEEHGVEEARELDPDTAPLQFWLRRHTDLER
Ga0190268_119324922	3300018466	Soil	MFSDADHETIDSPEALFRHLYEEHGVEEAADLDPETAPIQFWLRRHAELERAERSA
Ga0210381_101246782	3300021078	Groundwater Sediment	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRAA
Ga0208713_1010971	3300026652	Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDLETAPLQFWLR
Ga0208213_1006491	3300026686	Soil	MPADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAPIQFWLRRHAELERAQRAARRDDPPP
Ga0208712_1015922	3300026708	Soil	MFSDADHEVIDSPEALFRHLYDEHGVEEARDLDPETAPLQFW
Ga0208710_1010183	3300026790	Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDLETAPLQFWLRRHADLERAQRSARRQPEPP
Ga0209878_10337723	3300027163	Groundwater Sand	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVHFWLRRHAELEREARTLPADPPGRRAEVPR
Ga0209854_11060722	3300027384	Groundwater Sand	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVHFWLRRHAELEREARTPPADPPGRRA
Ga0209899_10665502	3300027490	Groundwater Sand	MSVDADHQVIDSPEALFRHLYEDHQVEEVRDLDPLAAPLHFWLRRHAELERDERAAAAAGQPRPPVAT
Ga0209843_10007847	3300027511	Groundwater Sand	MSADADHEVIDSPEALFRHLYEAHHVEEALDLDPASAPVHFWLRRHAELEREARTLP
Ga0209874_11549332	3300027577	Groundwater Sand	MSADADHEVIDSPEALLRHLYEEHHVEEALDVDPETAPVQFWLRRHAELERA
Ga0209461_101456041	3300027750	Agave	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAPIQFWLRRHADLERE
Ga0209574_100277591	3300027809	Agave	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAPLLV
Ga0207428_100010381	3300027907	Populus Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPGTAPLQFWLRRHTDLERAQRTARRQPEPPTQAD
Ga0247823_101303554	3300028590	Soil	MFSDADHEVIDSPEALFRHLYEEHGVEEARELDPDTAPLQFWLRRHTDLD
Ga0247823_104648522	3300028590	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRSGRG
Ga0247822_100525864	3300028592	Soil	MFSDADHEVIDSPEALFRHLYEEHGVEEARELDPDTAPLQFWLRRHTDLERAERAARRPSQPPD
Ga0307322_100041766	3300028710	Soil	MFADADHEVIDSPEALFRHLHEEHGVEEARDLDPE
Ga0307322_101838462	3300028710	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPL
Ga0307319_101265331	3300028722	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRA
Ga0307318_100099871	3300028744	Soil	MSADADHEVIDSPAALFRHLYEEHGVSEARDLDPESAPLQFWLRRHAELERDQRA
Ga0307318_102735732	3300028744	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHAD
Ga0307316_101357072	3300028755	Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLR
Ga0307320_102456092	3300028771	Soil	MSADADHEVIDSPAALFRHLYEEHGVSEARDLDPESAPLQFWLRRHAELERDQRAGRVANRQP
Ga0307288_102344182	3300028778	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRAARRQPDPPPV
Ga0307282_106420381	3300028784	Soil	MFADADHEVIDSPEALFRHLHEEHGVEEARDLDPETAPLQF
Ga0307299_103566451	3300028793	Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADL
Ga0247825_100351295	3300028812	Soil	MFSDADHEVIDSPEALFRHLYEEHGVEEARELDPDTAPLQFWLRRHTDLERAERAARRPS
Ga0307302_101266511	3300028814	Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRAARR
Ga0307289_103299351	3300028875	Soil	MFADADHEVIDSPEALFRHLYEEHGVTEAVDLDPETAPVQFWLRRHAELERAQRSARRQPDPP
Ga0307286_100028841	3300028876	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRAARRQPDPPP
Ga0307278_102452631	3300028878	Soil	MSADADHEVIDSPEALIRHLYEEHGVEEARDLDPETAP
Ga0307300_101256941	3300028880	Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRAARRPGPPPDAP
Ga0307300_101815692	3300028880	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDS
Ga0307304_101029521	3300028885	Soil	MFADADHEVIDSPEALFRHLYEEHGVTEAVDLDPETAPVQFWLRRHAELERAQRSARRQPDP
Ga0247827_100177164	3300028889	Soil	MFSDADHEVIDSPEALFRHLYEEHGVEEARELDPDTAPLQFWLRRHTDLERAE
Ga0268243_100014213	3300030510	Soil	MFADADHEVIDSPEALFRHLYEEHGVAEALELDPETAPVQFWL
Ga0268243_10404531	3300030510	Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAP
Ga0268253_100489723	3300030514	Agave	MPDELDHEVIDSPQALFRHLYEAHGVIEALDLDPDTAPLQFWLRRHSDLERASARAAAEE
Ga0307408_1003486083	3300031548	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVTEALELDPETAPVQFWLRRHAELERAQRGARRP
Ga0307405_100459965	3300031731	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVTEALDLDPETAPVQFWLRRHAE
Ga0307468_1014772012	3300031740	Hardwood Forest Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPD
Ga0307413_101487353	3300031824	Rhizosphere	MFSDADHEIIDSPEALFRHLYEEHGVEEAADLDPETAPIQFWLRRHAELERAER
Ga0307410_101063264	3300031852	Rhizosphere	MFSDADHEIIDSPEALFRHLYEEHGVEEAADLDPETAPIQFWLRRHAELERAERSARRQP
Ga0307410_115510501	3300031852	Rhizosphere	MPADADHEVIDSPEALFRHLYEEHGVDEARDLDPETAPLQFWLRRHAELERAQG
Ga0307410_117628511	3300031852	Rhizosphere	MFADADHEVINSPEALFRHLYEEHGVTEALELDPETAPIQF
Ga0307406_101106874	3300031901	Rhizosphere	MFSDADHEIIDSPEALFRHLYEEHGVEEAADLDPETAPVQFWIRRHAELERAERSARPAPRSQPPPAA
Ga0307406_102085001	3300031901	Rhizosphere	MSADADHEVIASPEALFRHLAEGHGVEEALDLDPETAPLQFWLRRHAELEREARAAPR
Ga0307407_102680433	3300031903	Rhizosphere	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWLRRHADLERAQRAAR
Ga0307407_112922261	3300031903	Rhizosphere	MFSDADHEIIDSPEALFRHLYEEHGVEEAADLDPETAPIQFWLRRHAELERAERSAR
Ga0307407_114631981	3300031903	Rhizosphere	MSDADHEVIDSPEALFRHLYEEHGVEEARDLDPETALLQFW
Ga0307412_100115777	3300031911	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDLETAPLQFWLRRHADLERAQRSARRRPEPPADPEPP
Ga0307412_111328951	3300031911	Rhizosphere	MFSDADHEIIDSPEALFRHLYEEHGVEEAADLDPETAPVQF
Ga0307412_117676231	3300031911	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVTEALELDPETAPVQFWLRRHAELERAQRGARRPEERPAR
Ga0307409_1012854002	3300031995	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVTEALELDPETAPIQFWLRRHAELERAQRASRRSDPPRDPEPEPD
Ga0307416_1009727542	3300032002	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVTEALELDPETAPIQFWLRRHAELERAQRASRRSDPPRDPEPEP
Ga0307414_102256061	3300032004	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDLETAPLQFWLRRHADLERAQRSARR
Ga0307414_111951851	3300032004	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAPLQFWLR
Ga0307411_108368481	3300032005	Rhizosphere	MPADADHEVIDSPEALFRHLYEEHGVDEARDLDPETAPLQFWLRRHAELERAQRAAGRPPDPEPAPRP
Ga0307411_110072651	3300032005	Rhizosphere	MHADADHEVIDSPEALFRHLYEEHGVTEALELDPETAPVQFWLRRHAELERAQRAARRPPEQPP
Ga0307415_1000218666	3300032126	Rhizosphere	MSADADHEVIASPEALFRHLAEGHGVEEALDLDPETAPLQFWLRRHAELEREARAAPRWPEPEGG
Ga0307415_1000351386	3300032126	Rhizosphere	MFADADHEVIDSPEALFRHLYEEHGVTEALDLDPETAPVQFWLRRHAELERAQRAARRPDPPPHPGL
Ga0307415_1002693411	3300032126	Rhizosphere	MSADADHEVIDSPEALFRHLYEEHQVEEALDLDPETAPVHF
Ga0268251_101547752	3300032159	Agave	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAPLQFWLRRHTDLERAQRAARRRPEPP
Ga0247829_100836004	3300033550	Soil	MSADADHEVIDSPEALFRHLYEEHGVEEARDLDPDSAPLQFWL
Ga0334911_012667_971_1141	3300034131	Sub-Biocrust Soil	MFADADHEVIDSPEALFRHLYEEHGVEEARDLDPETAPLQFWLRRHADLERAQRAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094811

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences