Metagenome / Metatranscriptome Family F094820

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094820
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	49 residues
Representative Sequence	MVEHNPPPSADSARPPVIPLPVALYVSDELIFELYDGGQPCRRFSIRW
Number of Associated Samples	79
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.96 %
% of genes near scaffold ends (potentially truncated)	83.81 %
% of genes from short scaffolds (< 2000 bps)	78.10 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.619 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (30.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.63% Coil/Unstructured: 72.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00440	TetR_N	5.71
PF13784	Fic_N	1.90
PF00248	Aldo_ket_red	1.90
PF04098	Rad52_Rad22	1.90
PF02899	Phage_int_SAM_1	1.90
PF01545	Cation_efflux	1.90
PF00583	Acetyltransf_1	0.95
PF04343	DUF488	0.95
PF13620	CarboxypepD_reg	0.95
PF13701	DDE_Tnp_1_4	0.95
PF06414	Zeta_toxin	0.95
PF04986	Y2_Tnp	0.95
PF02954	HTH_8	0.95
PF13659	Obsolete Pfam Family	0.95
PF00589	Phage_integrase	0.95
PF02683	DsbD	0.95
PF00436	SSB	0.95
PF00296	Bac_luciferase	0.95
PF12697	Abhydrolase_6	0.95
PF00441	Acyl-CoA_dh_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.90
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.90
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.90
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	1.90
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	1.90
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.95
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.95
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.95
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.95
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.62 %
Unclassified	root	N/A	32.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.62 %
Unclassified	root	N/A	32.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.62 %
Unclassified	root	N/A	32.38 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	55.24 %
Unclassified	root	N/A	32.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.38 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.95 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.95 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.81 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.95 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.95 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10024107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	4235	Open in IMG/M
3300002245\|JGIcombinedJ26739_100042989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4078	Open in IMG/M
3300002245\|JGIcombinedJ26739_100664714	All Organisms → cellular organisms → Bacteria → Acidobacteria	919	Open in IMG/M
3300002914\|JGI25617J43924_10296617	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300004082\|Ga0062384_100267024	Not Available	1046	Open in IMG/M
3300004635\|Ga0062388_101883180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300005437\|Ga0070710_10728440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	702	Open in IMG/M
3300005445\|Ga0070708_100464501	Not Available	1194	Open in IMG/M
3300006050\|Ga0075028_100002202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7137	Open in IMG/M
3300006050\|Ga0075028_100054400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1936	Open in IMG/M
3300006059\|Ga0075017_100149621	Not Available	1661	Open in IMG/M
3300006162\|Ga0075030_101048808	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300006162\|Ga0075030_101127292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300009088\|Ga0099830_10037193	All Organisms → cellular organisms → Bacteria	3342	Open in IMG/M
3300009090\|Ga0099827_10008157	All Organisms → cellular organisms → Bacteria → Acidobacteria	6554	Open in IMG/M
3300009520\|Ga0116214_1087107	Not Available	1145	Open in IMG/M
3300009552\|Ga0116138_1237264	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300009639\|Ga0116122_1066953	All Organisms → cellular organisms → Bacteria → Acidobacteria	1194	Open in IMG/M
3300009759\|Ga0116101_1186659	Not Available	523	Open in IMG/M
3300009824\|Ga0116219_10015276	All Organisms → cellular organisms → Bacteria	4848	Open in IMG/M
3300010339\|Ga0074046_10021122	All Organisms → cellular organisms → Bacteria	4564	Open in IMG/M
3300010339\|Ga0074046_10732679	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300010343\|Ga0074044_10637689	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300010379\|Ga0136449_100857325	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300010379\|Ga0136449_103108341	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300010379\|Ga0136449_103919120	Not Available	557	Open in IMG/M
3300010379\|Ga0136449_104629555	Not Available	504	Open in IMG/M
3300012096\|Ga0137389_11799366	Not Available	508	Open in IMG/M
3300012361\|Ga0137360_10741551	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300012363\|Ga0137390_10042262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4399	Open in IMG/M
3300012917\|Ga0137395_10105215	All Organisms → cellular organisms → Bacteria	1880	Open in IMG/M
3300012930\|Ga0137407_11288305	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300015195\|Ga0167658_1057995	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M
3300015241\|Ga0137418_10791421	Not Available	712	Open in IMG/M
3300017925\|Ga0187856_1227356	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300017925\|Ga0187856_1299600	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300017933\|Ga0187801_10169812	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300017934\|Ga0187803_10007117	All Organisms → cellular organisms → Bacteria	4435	Open in IMG/M
3300017943\|Ga0187819_10829599	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300017943\|Ga0187819_10870418	Not Available	505	Open in IMG/M
3300017946\|Ga0187879_10175810	Not Available	1205	Open in IMG/M
3300017948\|Ga0187847_10580532	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300017955\|Ga0187817_10658995	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300017955\|Ga0187817_10843262	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300017995\|Ga0187816_10560902	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300018002\|Ga0187868_1125958	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300018003\|Ga0187876_1043978	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300018003\|Ga0187876_1163007	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300018006\|Ga0187804_10104554	All Organisms → cellular organisms → Bacteria → Acidobacteria	1166	Open in IMG/M
3300018007\|Ga0187805_10270573	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300018007\|Ga0187805_10540047	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300018019\|Ga0187874_10019923	All Organisms → cellular organisms → Bacteria	3533	Open in IMG/M
3300018024\|Ga0187881_10444428	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300018025\|Ga0187885_10316602	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300018025\|Ga0187885_10457095	Not Available	570	Open in IMG/M
3300018030\|Ga0187869_10517867	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300018035\|Ga0187875_10510619	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300018040\|Ga0187862_10272133	Not Available	1080	Open in IMG/M
3300019789\|Ga0137408_1439379	All Organisms → cellular organisms → Bacteria → Acidobacteria	4413	Open in IMG/M
3300020581\|Ga0210399_11604411	Not Available	501	Open in IMG/M
3300021088\|Ga0210404_10781821	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300021406\|Ga0210386_10524175	Not Available	1024	Open in IMG/M
3300022727\|Ga0224567_100570	Not Available	932	Open in IMG/M
3300023090\|Ga0224558_1223580	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300025496\|Ga0208191_1034276	All Organisms → cellular organisms → Bacteria → Acidobacteria	1151	Open in IMG/M
3300025576\|Ga0208820_1155841	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300025916\|Ga0207663_10961131	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300026490\|Ga0257153_1028373	Not Available	1153	Open in IMG/M
3300027439\|Ga0209332_1096216	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300027619\|Ga0209330_1000925	All Organisms → cellular organisms → Bacteria	9993	Open in IMG/M
3300027625\|Ga0208044_1022112	All Organisms → cellular organisms → Bacteria → Acidobacteria	2253	Open in IMG/M
3300027648\|Ga0209420_1010513	All Organisms → cellular organisms → Bacteria	3319	Open in IMG/M
3300027737\|Ga0209038_10132946	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300027783\|Ga0209448_10136194	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300027846\|Ga0209180_10377724	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300027854\|Ga0209517_10160086	Not Available	1431	Open in IMG/M
3300027895\|Ga0209624_10047825	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300027905\|Ga0209415_10794033	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300027905\|Ga0209415_10803805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300027905\|Ga0209415_10908773	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300027908\|Ga0209006_10309833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1345	Open in IMG/M
3300031018\|Ga0265773_1025616	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300031234\|Ga0302325_13322570	Not Available	510	Open in IMG/M
3300031754\|Ga0307475_10074236	All Organisms → cellular organisms → Bacteria	2606	Open in IMG/M
3300031754\|Ga0307475_10452848	Not Available	1031	Open in IMG/M
3300031754\|Ga0307475_11549388	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300031962\|Ga0307479_11653381	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300031962\|Ga0307479_11918384	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300032160\|Ga0311301_10738511	Not Available	1371	Open in IMG/M
3300032160\|Ga0311301_11440659	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300032770\|Ga0335085_10879807	Not Available	978	Open in IMG/M
3300032783\|Ga0335079_10978649	Not Available	864	Open in IMG/M
3300032783\|Ga0335079_12043983	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300032892\|Ga0335081_11965645	Not Available	625	Open in IMG/M
3300032896\|Ga0335075_10783337	Not Available	898	Open in IMG/M
3300033134\|Ga0335073_10834567	Not Available	982	Open in IMG/M
3300033134\|Ga0335073_12119511	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300033402\|Ga0326728_10377559	Not Available	1228	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Aquatic	Environmental → Aquatic	42.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.33%
Freshwater	Environmental → Aquatic → Freshwater	37.14%
Sediment	Environmental → Aquatic → Sediment	5.71%
Peat	Environmental → Terrestrial → Peat	2.86%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	37.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	18.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	12.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	14.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	12.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.67%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.67%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.95%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300022727	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100241071	3300001356	Peatlands Soil	MVEHKPPPSADSARPPVIPLPSALYVSDELIFELYDGGQPCRRFSIRWERLVPAKE
JGIcombinedJ26739_1000429892	3300002245	Forest Soil	MVEHDSPQTAVSARPPAIPLPVALYVSDELIFERYDEGQPHRRFSIRWGRLVPAKESKP*
JGIcombinedJ26739_1006647141	3300002245	Forest Soil	MVENNPPAPSDSTRPRVIPLPIALYVSGELIYELYDGGQPCRRFSIRWERLVPTK
JGI25617J43924_102966171	3300002914	Grasslands Soil	MVEHNPPPHADRVPLIPLPIALYVSDGLVFELYDGGQPHRRFSIRWERLVPTKQAAPE
Ga0062384_1002670241	3300004082	Bog Forest Soil	MVEQNPPSPAVSAHRLVIPQPIALYVSGELIFELYDGGQPRRRFSIRWERFVPAK
Ga0062388_1018831801	3300004635	Bog Forest Soil	MVEHNPPPSADSARASVIPLPIALYVSDELIFELYDGGQPC
Ga0070710_107284402	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MIEHNPPLPSDSTRVSVIPLPIALYVSDGLALELYEGGQPCCSFSIRWERPVPAGETEQGEPL
Ga0070708_1004645012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVEHNPPSPAESARLPVNPLPIALYVSDGLIFELYDGGQPCR
Ga0075028_1000022027	3300006050	Watersheds	MVEHNPLSPAESARLPVDPFPIALYVSDGLIFELYDGGQPCRSLAIHWERLIPTRKDQLETVSPNPQAVSPTRRD*
Ga0075028_1000544003	3300006050	Watersheds	MVKHNPPPSADSARALLTPLPIALYVSDELIFELYDG*
Ga0075017_1001496213	3300006059	Watersheds	MVEHNPPSSADSARAPVIPLPVALYVSDGLIFELYD
Ga0075017_1004904691	3300006059	Watersheds	MVEHNPPSPAESARLPVNPLPIALYVSEELIFELYYGGQPCRRFSIRWERLIPTRKDQPETVSPHPQAVWRTHRD*
Ga0075030_1010488082	3300006162	Watersheds	MVEHNPPPHADRVPLIPLPIALYISDGLVFELYDGGQPHRRFS
Ga0075030_1011272921	3300006162	Watersheds	PPSPAESARLAVNHIPIALYVSEELIFELYDGGQPCRRFSIRWERLIPTRKDQPETVSPHPQAVWRTHRD*
Ga0099830_100371934	3300009088	Vadose Zone Soil	MVEHSPPAAADSVRPRVIPLPIALYVSGELIFELYDGGQPC
Ga0099827_100081571	3300009090	Vadose Zone Soil	MVEHNPPALADSARAPVIPLPIALYVSGELIFELYDGGQPCRRFS
Ga0116214_10871071	3300009520	Peatlands Soil	MIEHNPPLPADSARLQVIPLPIALYVSDGLIFELYDGGQPCCSFSIRWERLVPAKE
Ga0116136_10436013	3300009547	Peatland	MVEHNPPSPAESARLPVNPLPIALYVSDGLIFELYDGGQPRRSFLIRWERLIPTRKDQPETVSPNPQAVSPTHRD*
Ga0116138_12372641	3300009552	Peatland	MVENNPPVPADSARPPVIPLPVALYVSNELIFELYDGGHPCR
Ga0116122_10669533	3300009639	Peatland	MVENNPPVPADSARPPVIPLPVALYVSNELIFELYDGGQPCRRFSIRWERFIPSKENEP
Ga0116132_11707622	3300009646	Peatland	MVEHNPPSPAESARLPVNPLPIALYVSDGLIFELYDGGQPRRSFLIRWERLIPTRKDQPETVS
Ga0116101_11866591	3300009759	Peatland	MAEHNPPVPGDNAGPPVIPLPVALYVSDELIFELYDGGQPSRRFSILW
Ga0116219_100152761	3300009824	Peatlands Soil	MVEHNPPVPADSARPPVIPLPIALYVSDELIFELYDGGQPCRRFSIRWERL
Ga0074046_100211222	3300010339	Bog Forest Soil	MVEHNPPSPAESARFRVIPLPIALYVSDGLIFELYDGRQPCRSFAIRWERLIPTRKDQPETVSPNPHAVSPTHRD*
Ga0074046_107326792	3300010339	Bog Forest Soil	MVEHNPPVPADSARPPVIPLPVALYVSDELIFELYDGGQPCRRFSI
Ga0074044_106376892	3300010343	Bog Forest Soil	MVEHNPPLSTDSTRPPVISLPIALYVSDELIFELYDGG
Ga0136449_1008573253	3300010379	Peatlands Soil	MVEHNPPSPADSARTPVIPLPVALYVSDALIFELYNG
Ga0136449_1031083411	3300010379	Peatlands Soil	MVDHNPPSSVDSAQPPVIPLPVALYVSDELIFELYDG
Ga0136449_1039191201	3300010379	Peatlands Soil	MVEHNPPPSADSARPPVIPLPIALYVSGELIFELYDGGQPCRRFSIRWE
Ga0136449_1046295552	3300010379	Peatlands Soil	MVEHNPPPSANSIRPPVIPLPIALYVSGELIFELYDGGQPCRKFSIRWD
Ga0137389_117993662	3300012096	Vadose Zone Soil	MVEHNPPPHAARVPLIPLPIALYISDGLVFELYDGGQPCRRFSIRWERLVPAKQAAP
Ga0137360_107415511	3300012361	Vadose Zone Soil	MNEHNPPSSADSAQPPVIPLPVALYVSGELVFELYDGGQPR
Ga0137390_100422627	3300012363	Vadose Zone Soil	MVEHNPPALADSARAPVIPLPIALYVSGELIFELYDGGQPCRRFSIRW
Ga0137395_101052151	3300012917	Vadose Zone Soil	MVEHNPPPPADSACVPVIPLPIALYVSEGLIFELYDGGQPSRSFSIRWERLIPAKEN*
Ga0137407_112883051	3300012930	Vadose Zone Soil	MVEHNPPAPAESEHLPVIPLPTALYVSDGLIFELY
Ga0167658_10579951	3300015195	Glacier Forefield Soil	MVEHNPPSSADSAQPPVIPLPVALYVSNELILELYDGGQP
Ga0137418_107914212	3300015241	Vadose Zone Soil	MVEHNPPPSAYSIRPPIIPLPIALYVSGELIFELYDGGQPCRRFSIRWE
Ga0187856_10042646	3300017925	Peatland	MVEHNPPSPAESARLPVNPLPIALYVSDGLIFELYDGGQPRRSFLIRWERLIPTRKDQPETVSPNPQAVSPTHRD
Ga0187856_12273561	3300017925	Peatland	MVEHNPPPSADSAHPPVIPLPVALYVSDELIFELCDGGQPCRRFSIRWE
Ga0187856_12996002	3300017925	Peatland	MVAHDPPVPADRPHPSVIPLPVALYVSGELIFELYDGGQPCRRFSIRW
Ga0187801_101698121	3300017933	Freshwater Sediment	MVEHNPPPSADSPRPSVIPLPIALYVSGELIFELYDGGRPCRRFS
Ga0187803_100071173	3300017934	Freshwater Sediment	MVKDNPPSPAESACLPVNPLPIALYVSDGLIFELHDGGQPCRSFSIRWERLVPTRKDQPETVPPNPQAASRTCRD
Ga0187803_100087161	3300017934	Freshwater Sediment	MVEHNPPSPAGSAGLPVNPLPIALYVSDGLIFELCDGGQPCRRFRIRWERLIPTRKDQPETVSPNPQAVSPTHRD
Ga0187803_100261893	3300017934	Freshwater Sediment	MVEHNPPCPAERARLPVNPFPIALYVSDGLIFELYDGGQPCRSFRIRWERLIPTRKDQPETVSPNPQAVSPTHRD
Ga0187819_108295991	3300017943	Freshwater Sediment	MVEHNPPPSSDSTCPPVIPLPIALYVSGELIFELYDGGQPSRK
Ga0187819_108704181	3300017943	Freshwater Sediment	MVEHNPPPSADSARPPVIPLPVALYVCGELIFELYDGGQPCRRFSIRW
Ga0187879_101758101	3300017946	Peatland	MVEHNPPAPPDLARPPVIALPIALYVSGELIFELYDGGQPCRRFSIRWERFIPTKENEP
Ga0187847_105805321	3300017948	Peatland	MVEHNPPASDDSARAPVIPLPVALYVSDELIFELYDGGQPCRS
Ga0187817_106589952	3300017955	Freshwater Sediment	MVENNPPAPLDLARPPVIPLPTALYVSGELIFELYDGGQPRRRFAIRWERLVPT
Ga0187817_108432622	3300017955	Freshwater Sediment	MVEHNPPPSADSARPPVIPLPVALYVSDELIFELYDGGQPCRRFSIRW
Ga0187816_105609022	3300017995	Freshwater Sediment	MVEHNPPAPADRLHAPVIPLPIALYVSGELIFELYDGGRPC
Ga0187868_11259581	3300018002	Peatland	MVEHNPPVPADSARAPVIPLPVALYVSDELIFELCDGGQP
Ga0187876_10439781	3300018003	Peatland	MVENNPPVPADSARPPVIPLPVALYVSNELIFELYDGGQPCRRFSIRW
Ga0187876_11630072	3300018003	Peatland	MVDHNPPPSADRAHPPLIPLPVALYVSDELIFELYDGG
Ga0187804_100129235	3300018006	Freshwater Sediment	MVEHNPPSPAGRAGLPVNPLPIALYVSDGLIFELCDGGQPCRRFRIRWERLIPTRKDQPETVSPNPQAVSPTHRD
Ga0187804_101045542	3300018006	Freshwater Sediment	MVKDNPPSPAESACLPVNPLRIALYVSEGLIFELHDGGQPCLSVSIR
Ga0187805_102705732	3300018007	Freshwater Sediment	MVEHNPPPSADSARPPVIPLPVALYVSDELIFELYNGGQPCRRFSIRWERFIPAAK
Ga0187805_105400472	3300018007	Freshwater Sediment	MVEHNPPPSADSARSPMIPLPVALYVSDELIFELYDG
Ga0187874_100199231	3300018019	Peatland	MVENNPPVPADSARPPVIPLPVALYVSNELIFELYDGGQPCRRFSIRWER
Ga0187881_104444282	3300018024	Peatland	MVEHNPPVPADSARPPVIPLPVALYVSDELIFELY
Ga0187885_103166021	3300018025	Peatland	MVENNPPAPADPARPQVMPLPVALYVSGELIFELYDGGQ
Ga0187885_104570951	3300018025	Peatland	MVEHNAPPADARVVPVIPLPVALYVSDELIFELYDGGQPCRRFSIRW
Ga0187869_105178672	3300018030	Peatland	MVEHNPPVPADSARPPVIPLPVALYVSDELIFELYD
Ga0187875_105106192	3300018035	Peatland	MVEHNPPPSADRARAPVIPLPVALYVSDELIFELYDGGQP
Ga0187862_102721331	3300018040	Peatland	MVEHNPPAPPDLARPPVIALPIALYVSGELIFELYDGGQPCRRFSIRW
Ga0137408_14393793	3300019789	Vadose Zone Soil	MVEHNPPPHADRVPLIPLPIALYVSDGLVFELYDGGQPHRRFSIRWERLVSNEAGRAGGS
Ga0210399_116044112	3300020581	Soil	MVEHNPPPHADRVPLLPLPTALYVSDGLVFELYDGGQPHRRFSIRWERLVP
Ga0210404_107818211	3300021088	Soil	MVEHNPPVPANSAHRSVIPLPVALYVSGELIFELYDGGQPCRRFSIR
Ga0210386_105241751	3300021406	Soil	MVEHNPPASADRLRAPVIPLPIALYVSGDLIFELYDGGQPCRRFSI
Ga0224567_1005701	3300022727	Plant Litter	MVENNPPAPPDLARPLVIPLPIALYVSGELIFELY
Ga0224558_12235802	3300023090	Soil	MVEHNPPPSADSIRPPVIPLPIALYVCGELIFELYDGGQPSRRFSIRWDRLV
Ga0208191_10342763	3300025496	Peatland	MVENNPPVPADSARPPVIPLPVALYVSNELIFELYDGGQPCRRFSIRWERLVPAK
Ga0208820_11558411	3300025576	Peatland	MVDHNPPPSADRAHPPLIPLPVALYVSDELIFELYDG
Ga0207663_109611311	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MVEHNSPPSDDSVRPPVIPLPIALYVSGDLIFELYDGGQPCRRFSIR
Ga0257153_10283732	3300026490	Soil	MIEHNPPSSADSAQPPVISLPVALYVSGELIFELYDGGQPCRRFSIRWERFVPT
Ga0209332_10962162	3300027439	Forest Soil	MVEHNPPPSADSPRPPVISLPIALYVSGELIFELYDGGQPPRRFSIRWERLVPS
Ga0209330_100092510	3300027619	Forest Soil	MVEHDSPQTAVSARPPAIPLPVALYVSDELIFERYDEGQPHRRFSIRWGRLVPAKESKP
Ga0208044_10221121	3300027625	Peatlands Soil	MAEHNPPPSADSARPPVVPLPVALYVSDELIFELYDGGRPRRRFS
Ga0209420_10105135	3300027648	Forest Soil	MVEHNPPPADARGVPVIPRPVALYVSDELCFELYDGGQPCRRFLIRWE
Ga0209038_101329461	3300027737	Bog Forest Soil	MVEHNPPPSADRARAPVIPLPVALYVSDELIFELYDGGQPCRSF
Ga0209448_101361942	3300027783	Bog Forest Soil	MVEHNPPASADSARASVIPLPIALYVSDELIFELYDGGQ
Ga0209180_103777241	3300027846	Vadose Zone Soil	MVEHNVPPPGDSARLPVIPLPTALYVSDGLIFELYDGGQPRRSFSIRWERLVPAKE
Ga0209517_101600861	3300027854	Peatlands Soil	MVEHHPPPSADSIRPPVIPLPIALYVSGELIFELYDGGQPSRKFSIRWDRL
Ga0209624_100478255	3300027895	Forest Soil	MVEHNPPVPAESARAPAIPLPVALYVSGELNFWAL
Ga0209415_107940332	3300027905	Peatlands Soil	MAEHNPPPSADSARTPVIPLPVALYVSDELIFELYDGGQP
Ga0209415_108038051	3300027905	Peatlands Soil	MIEHNPPPSADSALPPVIPLPVALYVSDELIFELYDGGQP
Ga0209415_109087731	3300027905	Peatlands Soil	MVEHNPPSPADSARTPVIPLPVALYVSDALIFELYKGGQPCRRFSIRWERLVPAKENE
Ga0209006_103098334	3300027908	Forest Soil	APSDSALAPVIPLPVALYVSGELIFELYDGGQPGRRFSIRWERFVPAKESEPEAVQS
Ga0265773_10256162	3300031018	Soil	MIEHDDPPSFADSAQPPVIPLPVALYVSGELIFELYDGGQPCRRFSIRWE
Ga0302325_133225702	3300031234	Palsa	MVEHNPSHSADSARPPVIPLPVALYVSDELIFELYEGGQPCR
Ga0307475_100742365	3300031754	Hardwood Forest Soil	MVEHNPPASADRLRTPVIPLPIALYVSGDLIFELYDGGQP
Ga0307475_104528481	3300031754	Hardwood Forest Soil	MVEHNPPASADRSRAPVIPLPIALYVSSDRIFELYD
Ga0307475_115493881	3300031754	Hardwood Forest Soil	MPEQDPPSPADSTRRPTVPQPIALYVSGDLIFELYDGGQPWR
Ga0307479_116533812	3300031962	Hardwood Forest Soil	MIEHSPPTSDDSECPPVIPLPIALYVSGELIFELYD
Ga0307479_119183841	3300031962	Hardwood Forest Soil	MVEHNPPASADRSRAPVIPLPIALYVSSDRIFELYDGGQPRRRFSIRWER
Ga0311301_107385111	3300032160	Peatlands Soil	MVEHNPPPSADSIRPPVIPLPIALYVSHELIFELY
Ga0311301_114406592	3300032160	Peatlands Soil	MVEHNPPSPADSARTPVIPLPVALYVSDALIFELYNGGQPCRRFSIRWER
Ga0335085_108798072	3300032770	Soil	MIENSPPGSPDLARPLVIPSPVALYVSGELIFELYDGGQPCRRFSILWERFV
Ga0335079_109786491	3300032783	Soil	MIENSPPGSPDLARPLVIPSPVALYVSGELIFELYDGGQPCRRFSILWKRFVP
Ga0335079_120439831	3300032783	Soil	MVEHNPPVPADSARPPVIPLPVALYVSDELIFELYDGGQPCRRFSIRWERLVPAKEN
Ga0335081_119656452	3300032892	Soil	MIENSPPGSPDLARPLVTPSPVALYVSGELIFELYDGGQPCRRFSILWERFVPGKDNEP
Ga0335075_107833371	3300032896	Soil	MIENSPPGSPDLARPLVIPSPVALYVSGELIFELYDGGQPC
Ga0335073_108345671	3300033134	Soil	MVENNPPAPLDLARPPVIPLPTALYVSGELIFELYDGGQPR
Ga0335073_121195111	3300033134	Soil	MVENNPPAPLDLARPPVIPLPTALYVSGELIFELYDGGQPRRRFSIRWDRFVPT
Ga0326728_103775592	3300033402	Peat Soil	MVEHNPPDLADSAHPSVIPLPVALYVSGELIFELYDGGQPSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094820

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences