NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F094887

Metagenome Family F094887

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094887
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 42 residues
Representative Sequence MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK
Number of Associated Samples 72
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.95 %
% of genes near scaffold ends (potentially truncated) 32.38 %
% of genes from short scaffolds (< 2000 bps) 83.81 %
Associated GOLD sequencing projects 62
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (60.952 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(51.429 % of family members)
Environment Ontology (ENVO) Unclassified
(85.714 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(85.714 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 93.02%    β-sheet: 0.00%    Coil/Unstructured: 6.98%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13578Methyltransf_24 3.81
PF07275ArdA 1.90
PF00145DNA_methylase 0.95
PF04545Sigma70_r4 0.95
PF08281Sigma70_r4_2 0.95
PF12705PDDEXK_1 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG4734Antirestriction protein ArdADefense mechanisms [V] 1.90
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A60.95 %
All OrganismsrootAll Organisms39.05 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003277|JGI25908J49247_10063846Not Available933Open in IMG/M
3300003393|JGI25909J50240_1004497All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3547Open in IMG/M
3300003393|JGI25909J50240_1098040Not Available582Open in IMG/M
3300003394|JGI25907J50239_1090066Not Available600Open in IMG/M
3300003490|JGI25926J51410_1009849All Organisms → Viruses → Predicted Viral1982Open in IMG/M
3300003491|JGI25924J51412_1031972All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage872Open in IMG/M
3300004054|Ga0063232_10278913Not Available508Open in IMG/M
3300004096|Ga0066177_10377339Not Available613Open in IMG/M
3300005517|Ga0070374_10142581Not Available1244Open in IMG/M
3300005517|Ga0070374_10493243All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage611Open in IMG/M
3300005581|Ga0049081_10267754Not Available595Open in IMG/M
3300005582|Ga0049080_10086263Not Available1072Open in IMG/M
3300005585|Ga0049084_10161875Not Available777Open in IMG/M
3300005739|Ga0076948_1003887All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4656Open in IMG/M
3300005805|Ga0079957_1052823All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4402475Open in IMG/M
3300008117|Ga0114351_1400572Not Available583Open in IMG/M
3300008259|Ga0114841_1073384Not Available1576Open in IMG/M
3300008266|Ga0114363_1030727All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3827Open in IMG/M
3300009068|Ga0114973_10029418All Organisms → Viruses → Predicted Viral3334Open in IMG/M
3300009151|Ga0114962_10016486All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5297Open in IMG/M
3300009151|Ga0114962_10591991Not Available576Open in IMG/M
3300009152|Ga0114980_10502002Not Available691Open in IMG/M
3300009155|Ga0114968_10023582All Organisms → Viruses → Predicted Viral4206Open in IMG/M
3300009159|Ga0114978_10252409All Organisms → Viruses → Predicted Viral1095Open in IMG/M
3300009161|Ga0114966_10783403Not Available515Open in IMG/M
3300009183|Ga0114974_10214797All Organisms → Viruses → Predicted Viral1167Open in IMG/M
3300010158|Ga0114960_10170963All Organisms → Viruses → Predicted Viral1153Open in IMG/M
3300010354|Ga0129333_10167074All Organisms → Viruses → Predicted Viral2014Open in IMG/M
3300010885|Ga0133913_10263825All Organisms → Viruses → Predicted Viral4570Open in IMG/M
3300010885|Ga0133913_12452682All Organisms → Viruses → Predicted Viral1273Open in IMG/M
3300011339|Ga0153700_10221Not Available30188Open in IMG/M
3300013372|Ga0177922_10252335Not Available650Open in IMG/M
3300013372|Ga0177922_10841127Not Available667Open in IMG/M
3300017701|Ga0181364_1028308Not Available910Open in IMG/M
3300017701|Ga0181364_1063526Not Available569Open in IMG/M
3300017716|Ga0181350_1101117All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon709Open in IMG/M
3300017716|Ga0181350_1131215Not Available596Open in IMG/M
3300017722|Ga0181347_1188887Not Available546Open in IMG/M
3300017723|Ga0181362_1091582All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440608Open in IMG/M
3300017736|Ga0181365_1173296Not Available505Open in IMG/M
3300017761|Ga0181356_1105457Not Available914Open in IMG/M
3300017761|Ga0181356_1121115Not Available835Open in IMG/M
3300017766|Ga0181343_1048079All Organisms → Viruses → Predicted Viral1259Open in IMG/M
3300017774|Ga0181358_1132894Not Available865Open in IMG/M
3300017774|Ga0181358_1196594Not Available662Open in IMG/M
3300017774|Ga0181358_1224477All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440602Open in IMG/M
3300017777|Ga0181357_1125252Not Available961Open in IMG/M
3300017777|Ga0181357_1232610Not Available646Open in IMG/M
3300017777|Ga0181357_1245274Not Available624Open in IMG/M
3300017777|Ga0181357_1340386Not Available500Open in IMG/M
3300017780|Ga0181346_1205730Not Available707Open in IMG/M
3300017780|Ga0181346_1237171Not Available643Open in IMG/M
3300017780|Ga0181346_1271998Not Available584Open in IMG/M
3300017784|Ga0181348_1269632All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440581Open in IMG/M
3300017785|Ga0181355_1111476Not Available1125Open in IMG/M
3300019784|Ga0181359_1058232All Organisms → Viruses → Predicted Viral1482Open in IMG/M
3300019784|Ga0181359_1071842Not Available1310Open in IMG/M
3300019784|Ga0181359_1083685All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1192Open in IMG/M
3300019784|Ga0181359_1114555Not Available972Open in IMG/M
3300019784|Ga0181359_1122449Not Available928Open in IMG/M
3300019784|Ga0181359_1127266All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage903Open in IMG/M
3300019784|Ga0181359_1202857Not Available637Open in IMG/M
3300019784|Ga0181359_1223356Not Available590Open in IMG/M
3300019784|Ga0181359_1237870Not Available561Open in IMG/M
3300019784|Ga0181359_1272605Not Available501Open in IMG/M
3300019784|Ga0181359_1272669Not Available501Open in IMG/M
3300020530|Ga0208235_1001274Not Available4551Open in IMG/M
3300021962|Ga0222713_10622968All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440626Open in IMG/M
3300022190|Ga0181354_1059762All Organisms → Viruses → Predicted Viral1268Open in IMG/M
3300022190|Ga0181354_1116283Not Available862Open in IMG/M
3300022190|Ga0181354_1222840Not Available550Open in IMG/M
3300022407|Ga0181351_1247833Not Available557Open in IMG/M
3300023174|Ga0214921_10064925All Organisms → Viruses → Predicted Viral3042Open in IMG/M
3300023174|Ga0214921_10160790Not Available1496Open in IMG/M
3300027493|Ga0255103_1068138Not Available602Open in IMG/M
3300027586|Ga0208966_1067804Not Available1001Open in IMG/M
3300027608|Ga0208974_1005570All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4324Open in IMG/M
3300027608|Ga0208974_1006983All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes3804Open in IMG/M
3300027608|Ga0208974_1098604Not Available782Open in IMG/M
3300027649|Ga0208960_1148020Not Available588Open in IMG/M
3300027656|Ga0209357_1083012Not Available935Open in IMG/M
3300027712|Ga0209499_1191445Not Available728Open in IMG/M
(restricted) 3300027728|Ga0247836_1134139All Organisms → Viruses → Predicted Viral1106Open in IMG/M
3300027744|Ga0209355_1357816Not Available533Open in IMG/M
3300027759|Ga0209296_1025713All Organisms → Viruses → Predicted Viral3297Open in IMG/M
3300027772|Ga0209768_10341590Not Available615Open in IMG/M
3300027782|Ga0209500_10176699All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440982Open in IMG/M
3300027798|Ga0209353_10299859Not Available681Open in IMG/M
3300027808|Ga0209354_10040332All Organisms → Viruses → Predicted Viral1875Open in IMG/M
3300027808|Ga0209354_10201046All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage808Open in IMG/M
3300027892|Ga0209550_10652411Not Available612Open in IMG/M
3300028025|Ga0247723_1044760All Organisms → Viruses → Predicted Viral1296Open in IMG/M
3300028025|Ga0247723_1164639Not Available510Open in IMG/M
(restricted) 3300028569|Ga0247843_1240319All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon661Open in IMG/M
3300031707|Ga0315291_10232119All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C4401857Open in IMG/M
3300031758|Ga0315907_10012459Not Available8291Open in IMG/M
3300032046|Ga0315289_10627778All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon994Open in IMG/M
3300032046|Ga0315289_10654981Not Available964Open in IMG/M
3300033233|Ga0334722_11116201Not Available553Open in IMG/M
3300034062|Ga0334995_0049866All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3429Open in IMG/M
3300034103|Ga0335030_0381323Not Available920Open in IMG/M
3300034106|Ga0335036_0518554All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon739Open in IMG/M
3300034111|Ga0335063_0259615Not Available942Open in IMG/M
3300034116|Ga0335068_0150650All Organisms → Viruses → Predicted Viral1257Open in IMG/M
3300034200|Ga0335065_0541346Not Available689Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake51.43%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake13.33%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.52%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic7.62%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.81%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton2.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.90%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.90%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater0.95%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water0.95%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.95%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.95%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300003394Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003491Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004054Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2)EnvironmentalOpen in IMG/M
3300004096Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005585Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRFEnvironmentalOpen in IMG/M
3300005739Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008259Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009155Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009161Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300010158Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaGEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011339Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - HannamEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017722Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017736Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.NEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017784Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020530Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300027493Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_0hEnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027649Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027656Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027728 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14mEnvironmentalOpen in IMG/M
3300027744Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034111Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186EnvironmentalOpen in IMG/M
3300034116Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOREnvironmentalOpen in IMG/M
3300034200Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI25908J49247_1006384633300003277Freshwater LakeMNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIERELAR*
JGI25909J50240_100449733300003393Freshwater LakeMNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIEIEVGK*
JGI25909J50240_109804033300003393Freshwater LakeMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK*
JGI25907J50239_109006633300003394Freshwater LakeVMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK*
JGI25926J51410_100984943300003490Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAK*
JGI25924J51412_103197233300003491Freshwater LakeMEKELKEIXEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK*
Ga0063232_1027891323300004054Freshwater LakeMEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVERE
Ga0066177_1037733933300004096Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERKGMK*
Ga0070374_1014258153300005517Freshwater LakeMEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVEREGMK*
Ga0070374_1049324333300005517Freshwater LakeMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK*
Ga0049081_1026775423300005581Freshwater LenticMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELTK*
Ga0049080_1008626353300005582Freshwater LenticMKKELKEIDEAITNLWWSAEISDTAKLWWNDHYQEIVERELAK*
Ga0049084_1016187523300005585Freshwater LenticMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEKELAK*
Ga0076948_1003887113300005739Lake WaterMNKEMKEIDEVLTNLWWSAEISDSAKLWWNDHYREIVEKELAK*
Ga0079957_105282383300005805LakeMSKELKEIDEALTSLWWSAEISDNAKLWWNDHYQQLMERELAR*
Ga0114351_140057233300008117Freshwater, PlanktonMMASKELKEINEALTNLWWSAEISDNAKLWWNDHYQQLMERELAK*
Ga0114841_107338483300008259Freshwater, PlanktonMNKELKEINEALTSLWWSAEISDNAKLWWNDHYQQLMERELAK*
Ga0114363_103072743300008266Freshwater, PlanktonMKKELKEIDEAIANLWWGAEISDKAKLWWNDHYQEIVERELAK*
Ga0114973_10029418113300009068Freshwater LakeMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK*
Ga0114962_10016486113300009151Freshwater LakeMEKELKEIDEAITNLWWAAEISDKAKLWWNDHYRLLMERELAK*
Ga0114962_1059199123300009151Freshwater LakeMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIIERELAK*
Ga0114980_1050200213300009152Freshwater LakeDEAITNLWWGAEISDTAKLWWNDHYQEIIERELAK*
Ga0114968_10023582103300009155Freshwater LakeMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVERELAK*
Ga0114978_1025240963300009159Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIIERELAK*
Ga0114966_1078340313300009161Freshwater LakeLKELDEAITYLWWAAEISDATKLWWNDHYKLLIERELAK*
Ga0114974_1021479743300009183Freshwater LakeMEKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAK*
Ga0114960_1017096323300010158Freshwater LakeMEKELKEIYEALTNLWWGAEISDKAKLWWNDHYQEIIERELAK*
Ga0129333_1016707433300010354Freshwater To Marine Saline GradientMSKELKEINEALTNLWWSAEISDNAKLWWNDHYQRLMERELAK*
Ga0133913_1026382583300010885Freshwater LakeMEKELKEIDEALTNLWWSAEISDKAKLWWNDHYQEITERELAK*
Ga0133913_1245268253300010885Freshwater LakeMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQE
Ga0153700_10221363300011339FreshwaterMNKDMKEIDEVLTNLWWSAEISDSAKLWWNDHYREILEKELAK*
Ga0177922_1025233513300013372FreshwaterEAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK*
Ga0177922_1084112733300013372FreshwaterMKKELKEIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK*
Ga0181364_102830843300017701Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAR
Ga0181364_106352633300017701Freshwater LakeMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVEKELAK
Ga0181350_110111733300017716Freshwater LakeKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0181350_113121533300017716Freshwater LakeMNKEMKEIDEALANLWWSAEISDRAKLWWNDHYQEIIERELAR
Ga0181347_118888713300017722Freshwater LakeMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQE
Ga0181362_109158233300017723Freshwater LakeMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELTK
Ga0181365_117329613300017736Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVENLLL
Ga0181356_110545713300017761Freshwater LakeMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVER
Ga0181356_112111543300017761Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMR
Ga0181343_104807953300017766Freshwater LakeMKKELKEIDEAITNLWWSAEISDTAKLWWNDHYQEIVEKELVK
Ga0181358_113289423300017774Freshwater LakeMKKELKEIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK
Ga0181358_119659433300017774Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREEMK
Ga0181358_122447713300017774Freshwater LakeKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELTK
Ga0181357_112525213300017777Freshwater LakeDEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMK
Ga0181357_123261013300017777Freshwater LakeDEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMR
Ga0181357_124527413300017777Freshwater LakeEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0181357_134038623300017777Freshwater LakeMEKEMKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0181346_120573033300017780Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMK
Ga0181346_123717113300017780Freshwater LakeMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERE
Ga0181346_127199833300017780Freshwater LakeMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVERELA
Ga0181348_126963213300017784Freshwater LakeKELDEAITYLWWAAEISDATKLWWNDHYRLLIERELAK
Ga0181355_111147613300017785Freshwater LakeKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0181359_105823223300019784Freshwater LakeMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0181359_107184213300019784Freshwater LakeMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIIERELFFS
Ga0181359_108368543300019784Freshwater LakeMEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVEREGMK
Ga0181359_111455523300019784Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIIERELAK
Ga0181359_112244943300019784Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAK
Ga0181359_112726623300019784Freshwater LakeMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0181359_120285723300019784Freshwater LakeMNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIERELAR
Ga0181359_122335633300019784Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQE
Ga0181359_123787033300019784Freshwater LakeEIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK
Ga0181359_127260523300019784Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERKGMK
Ga0181359_127266913300019784Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVEKELAK
Ga0208235_100127473300020530FreshwaterVSKELKEINEALTSLWWSAEISDNAKLWWNDHYQQLMERELAK
Ga0222713_1062296833300021962Estuarine WaterMSKELKEIDEALTNLWWSAEISDNAKLWWNDHYQQLMERELAK
Ga0181354_105976243300022190Freshwater LakeMEKELKEIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK
Ga0181354_111628333300022190Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREREXDE
Ga0181354_122284033300022190Freshwater LakeMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK
Ga0181351_124783333300022407Freshwater LakeMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0214921_1006492593300023174FreshwaterMEKELKEIDEALTNLWWSAEISDNAKLWWNDHYKEIME
Ga0214921_1016079083300023174FreshwaterGRVMEKELKEIDEALTNLWWSAEISDNAKLWWNDHYKEIMERELAK
Ga0255103_106813833300027493FreshwaterMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEREEMK
Ga0208966_106780413300027586Freshwater LenticMKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVE
Ga0208974_100557083300027608Freshwater LenticMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELTK
Ga0208974_100698353300027608Freshwater LenticMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0208974_109860443300027608Freshwater LenticMKKELKEIDEAITNLWWSAEISDTAKLWWNDHYQEIVERELAK
Ga0208960_114802023300027649Freshwater LenticMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEKELAK
Ga0209357_108301243300027656Freshwater LakeMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVE
Ga0209499_119144533300027712Freshwater LakeMEKELKEIDEAITNLWWAAEISDKAKLWWNDHYRLLMERELAK
(restricted) Ga0247836_113413963300027728FreshwaterMNKEMKEIDEVLTNLWWSAEISDTTKLWWNDHYQEIVERELAK
Ga0209355_135781623300027744Freshwater LakeMNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIERELAK
Ga0209296_102571333300027759Freshwater LakeMEKELKEIDEALTNLWWSAEISDKAKLWWNDHYQEITERELAK
Ga0209768_1034159013300027772Freshwater LakeMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELA
Ga0209500_1017669953300027782Freshwater LakeMKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIIERELAK
Ga0209353_1029985943300027798Freshwater LakeMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVER
Ga0209354_1004033283300027808Freshwater LakeMEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVGREGMK
Ga0209354_1020104653300027808Freshwater LakeVMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0209550_1065241113300027892Freshwater LakeMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERE
Ga0247723_104476063300028025Deep Subsurface SedimentMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVDRELAK
Ga0247723_116463933300028025Deep Subsurface SedimentMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVN
(restricted) Ga0247843_124031923300028569FreshwaterMEKELKEIDEAITNLWWSAEISDKTKLWWNDHYREIVERELAK
Ga0315291_1023211943300031707SedimentMEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVERELAK
Ga0315907_1001245983300031758FreshwaterMASKELKEINEALTNLWWSAEISDNAKLWWNDHYQQLMERELAK
Ga0315289_1062777843300032046SedimentMEKELKEKDEAITSLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0315289_1065498153300032046SedimentMEKELKEIDEAITSLWWGAEISDKAKLWWNDHDQEIVERELAK
Ga0334722_1111620133300033233SedimentMEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVEREL
Ga0334995_0049866_3031_31623300034062FreshwaterMSKELKEINEALTSLWWSAEISDNAKLWWNDHYQQLMERELAK
Ga0335030_0381323_388_5193300034103FreshwaterMNKEIREINEALTNLWWSAEISDNAKLWWNDHYQELMQRELAK
Ga0335036_0518554_2_1303300034106FreshwaterEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK
Ga0335063_0259615_504_6353300034111FreshwaterMSKELKEINEALTNLWWSAEISDNAKLWWNDHYQRLMERELAK
Ga0335068_0150650_1_1263300034116FreshwaterKELKEINEALTNLWWSAEISDNAKLWWNDHYQRLMERELAK
Ga0335065_0541346_387_5393300034200FreshwaterMRERGRVMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK


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