Basic Information | |
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Family ID | F094887 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 42 residues |
Representative Sequence | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Number of Associated Samples | 72 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 80.95 % |
% of genes near scaffold ends (potentially truncated) | 32.38 % |
% of genes from short scaffolds (< 2000 bps) | 83.81 % |
Associated GOLD sequencing projects | 62 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (60.952 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (51.429 % of family members) |
Environment Ontology (ENVO) | Unclassified (85.714 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (85.714 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 93.02% β-sheet: 0.00% Coil/Unstructured: 6.98% | Feature Viewer |
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Pfam ID | Name | % Frequency in 105 Family Scaffolds |
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PF13578 | Methyltransf_24 | 3.81 |
PF07275 | ArdA | 1.90 |
PF00145 | DNA_methylase | 0.95 |
PF04545 | Sigma70_r4 | 0.95 |
PF08281 | Sigma70_r4_2 | 0.95 |
PF12705 | PDDEXK_1 | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
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COG4734 | Antirestriction protein ArdA | Defense mechanisms [V] | 1.90 |
COG0270 | DNA-cytosine methylase | Replication, recombination and repair [L] | 0.95 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 60.95 % |
All Organisms | root | All Organisms | 39.05 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300003277|JGI25908J49247_10063846 | Not Available | 933 | Open in IMG/M |
3300003393|JGI25909J50240_1004497 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 3547 | Open in IMG/M |
3300003393|JGI25909J50240_1098040 | Not Available | 582 | Open in IMG/M |
3300003394|JGI25907J50239_1090066 | Not Available | 600 | Open in IMG/M |
3300003490|JGI25926J51410_1009849 | All Organisms → Viruses → Predicted Viral | 1982 | Open in IMG/M |
3300003491|JGI25924J51412_1031972 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 872 | Open in IMG/M |
3300004054|Ga0063232_10278913 | Not Available | 508 | Open in IMG/M |
3300004096|Ga0066177_10377339 | Not Available | 613 | Open in IMG/M |
3300005517|Ga0070374_10142581 | Not Available | 1244 | Open in IMG/M |
3300005517|Ga0070374_10493243 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 611 | Open in IMG/M |
3300005581|Ga0049081_10267754 | Not Available | 595 | Open in IMG/M |
3300005582|Ga0049080_10086263 | Not Available | 1072 | Open in IMG/M |
3300005585|Ga0049084_10161875 | Not Available | 777 | Open in IMG/M |
3300005739|Ga0076948_1003887 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 4656 | Open in IMG/M |
3300005805|Ga0079957_1052823 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440 | 2475 | Open in IMG/M |
3300008117|Ga0114351_1400572 | Not Available | 583 | Open in IMG/M |
3300008259|Ga0114841_1073384 | Not Available | 1576 | Open in IMG/M |
3300008266|Ga0114363_1030727 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 3827 | Open in IMG/M |
3300009068|Ga0114973_10029418 | All Organisms → Viruses → Predicted Viral | 3334 | Open in IMG/M |
3300009151|Ga0114962_10016486 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 5297 | Open in IMG/M |
3300009151|Ga0114962_10591991 | Not Available | 576 | Open in IMG/M |
3300009152|Ga0114980_10502002 | Not Available | 691 | Open in IMG/M |
3300009155|Ga0114968_10023582 | All Organisms → Viruses → Predicted Viral | 4206 | Open in IMG/M |
3300009159|Ga0114978_10252409 | All Organisms → Viruses → Predicted Viral | 1095 | Open in IMG/M |
3300009161|Ga0114966_10783403 | Not Available | 515 | Open in IMG/M |
3300009183|Ga0114974_10214797 | All Organisms → Viruses → Predicted Viral | 1167 | Open in IMG/M |
3300010158|Ga0114960_10170963 | All Organisms → Viruses → Predicted Viral | 1153 | Open in IMG/M |
3300010354|Ga0129333_10167074 | All Organisms → Viruses → Predicted Viral | 2014 | Open in IMG/M |
3300010885|Ga0133913_10263825 | All Organisms → Viruses → Predicted Viral | 4570 | Open in IMG/M |
3300010885|Ga0133913_12452682 | All Organisms → Viruses → Predicted Viral | 1273 | Open in IMG/M |
3300011339|Ga0153700_10221 | Not Available | 30188 | Open in IMG/M |
3300013372|Ga0177922_10252335 | Not Available | 650 | Open in IMG/M |
3300013372|Ga0177922_10841127 | Not Available | 667 | Open in IMG/M |
3300017701|Ga0181364_1028308 | Not Available | 910 | Open in IMG/M |
3300017701|Ga0181364_1063526 | Not Available | 569 | Open in IMG/M |
3300017716|Ga0181350_1101117 | All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon | 709 | Open in IMG/M |
3300017716|Ga0181350_1131215 | Not Available | 596 | Open in IMG/M |
3300017722|Ga0181347_1188887 | Not Available | 546 | Open in IMG/M |
3300017723|Ga0181362_1091582 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440 | 608 | Open in IMG/M |
3300017736|Ga0181365_1173296 | Not Available | 505 | Open in IMG/M |
3300017761|Ga0181356_1105457 | Not Available | 914 | Open in IMG/M |
3300017761|Ga0181356_1121115 | Not Available | 835 | Open in IMG/M |
3300017766|Ga0181343_1048079 | All Organisms → Viruses → Predicted Viral | 1259 | Open in IMG/M |
3300017774|Ga0181358_1132894 | Not Available | 865 | Open in IMG/M |
3300017774|Ga0181358_1196594 | Not Available | 662 | Open in IMG/M |
3300017774|Ga0181358_1224477 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440 | 602 | Open in IMG/M |
3300017777|Ga0181357_1125252 | Not Available | 961 | Open in IMG/M |
3300017777|Ga0181357_1232610 | Not Available | 646 | Open in IMG/M |
3300017777|Ga0181357_1245274 | Not Available | 624 | Open in IMG/M |
3300017777|Ga0181357_1340386 | Not Available | 500 | Open in IMG/M |
3300017780|Ga0181346_1205730 | Not Available | 707 | Open in IMG/M |
3300017780|Ga0181346_1237171 | Not Available | 643 | Open in IMG/M |
3300017780|Ga0181346_1271998 | Not Available | 584 | Open in IMG/M |
3300017784|Ga0181348_1269632 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440 | 581 | Open in IMG/M |
3300017785|Ga0181355_1111476 | Not Available | 1125 | Open in IMG/M |
3300019784|Ga0181359_1058232 | All Organisms → Viruses → Predicted Viral | 1482 | Open in IMG/M |
3300019784|Ga0181359_1071842 | Not Available | 1310 | Open in IMG/M |
3300019784|Ga0181359_1083685 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1192 | Open in IMG/M |
3300019784|Ga0181359_1114555 | Not Available | 972 | Open in IMG/M |
3300019784|Ga0181359_1122449 | Not Available | 928 | Open in IMG/M |
3300019784|Ga0181359_1127266 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 903 | Open in IMG/M |
3300019784|Ga0181359_1202857 | Not Available | 637 | Open in IMG/M |
3300019784|Ga0181359_1223356 | Not Available | 590 | Open in IMG/M |
3300019784|Ga0181359_1237870 | Not Available | 561 | Open in IMG/M |
3300019784|Ga0181359_1272605 | Not Available | 501 | Open in IMG/M |
3300019784|Ga0181359_1272669 | Not Available | 501 | Open in IMG/M |
3300020530|Ga0208235_1001274 | Not Available | 4551 | Open in IMG/M |
3300021962|Ga0222713_10622968 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440 | 626 | Open in IMG/M |
3300022190|Ga0181354_1059762 | All Organisms → Viruses → Predicted Viral | 1268 | Open in IMG/M |
3300022190|Ga0181354_1116283 | Not Available | 862 | Open in IMG/M |
3300022190|Ga0181354_1222840 | Not Available | 550 | Open in IMG/M |
3300022407|Ga0181351_1247833 | Not Available | 557 | Open in IMG/M |
3300023174|Ga0214921_10064925 | All Organisms → Viruses → Predicted Viral | 3042 | Open in IMG/M |
3300023174|Ga0214921_10160790 | Not Available | 1496 | Open in IMG/M |
3300027493|Ga0255103_1068138 | Not Available | 602 | Open in IMG/M |
3300027586|Ga0208966_1067804 | Not Available | 1001 | Open in IMG/M |
3300027608|Ga0208974_1005570 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 4324 | Open in IMG/M |
3300027608|Ga0208974_1006983 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 3804 | Open in IMG/M |
3300027608|Ga0208974_1098604 | Not Available | 782 | Open in IMG/M |
3300027649|Ga0208960_1148020 | Not Available | 588 | Open in IMG/M |
3300027656|Ga0209357_1083012 | Not Available | 935 | Open in IMG/M |
3300027712|Ga0209499_1191445 | Not Available | 728 | Open in IMG/M |
(restricted) 3300027728|Ga0247836_1134139 | All Organisms → Viruses → Predicted Viral | 1106 | Open in IMG/M |
3300027744|Ga0209355_1357816 | Not Available | 533 | Open in IMG/M |
3300027759|Ga0209296_1025713 | All Organisms → Viruses → Predicted Viral | 3297 | Open in IMG/M |
3300027772|Ga0209768_10341590 | Not Available | 615 | Open in IMG/M |
3300027782|Ga0209500_10176699 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440 | 982 | Open in IMG/M |
3300027798|Ga0209353_10299859 | Not Available | 681 | Open in IMG/M |
3300027808|Ga0209354_10040332 | All Organisms → Viruses → Predicted Viral | 1875 | Open in IMG/M |
3300027808|Ga0209354_10201046 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 808 | Open in IMG/M |
3300027892|Ga0209550_10652411 | Not Available | 612 | Open in IMG/M |
3300028025|Ga0247723_1044760 | All Organisms → Viruses → Predicted Viral | 1296 | Open in IMG/M |
3300028025|Ga0247723_1164639 | Not Available | 510 | Open in IMG/M |
(restricted) 3300028569|Ga0247843_1240319 | All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon | 661 | Open in IMG/M |
3300031707|Ga0315291_10232119 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440 | 1857 | Open in IMG/M |
3300031758|Ga0315907_10012459 | Not Available | 8291 | Open in IMG/M |
3300032046|Ga0315289_10627778 | All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon | 994 | Open in IMG/M |
3300032046|Ga0315289_10654981 | Not Available | 964 | Open in IMG/M |
3300033233|Ga0334722_11116201 | Not Available | 553 | Open in IMG/M |
3300034062|Ga0334995_0049866 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 3429 | Open in IMG/M |
3300034103|Ga0335030_0381323 | Not Available | 920 | Open in IMG/M |
3300034106|Ga0335036_0518554 | All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon | 739 | Open in IMG/M |
3300034111|Ga0335063_0259615 | Not Available | 942 | Open in IMG/M |
3300034116|Ga0335068_0150650 | All Organisms → Viruses → Predicted Viral | 1257 | Open in IMG/M |
3300034200|Ga0335065_0541346 | Not Available | 689 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 51.43% |
Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 13.33% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 9.52% |
Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 7.62% |
Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 3.81% |
Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 2.86% |
Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 1.90% |
Deep Subsurface Sediment | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment | 1.90% |
Freshwater | Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater | 0.95% |
Lake Water | Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water | 0.95% |
Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake | 0.95% |
Freshwater | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater | 0.95% |
Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 0.95% |
Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.95% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.95% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 0.95% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300003277 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD | Environmental | Open in IMG/M |
3300003393 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD | Environmental | Open in IMG/M |
3300003394 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN | Environmental | Open in IMG/M |
3300003490 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN | Environmental | Open in IMG/M |
3300003491 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD | Environmental | Open in IMG/M |
3300004054 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (v2) | Environmental | Open in IMG/M |
3300004096 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2) | Environmental | Open in IMG/M |
3300005517 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4) | Environmental | Open in IMG/M |
3300005581 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF | Environmental | Open in IMG/M |
3300005582 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF | Environmental | Open in IMG/M |
3300005585 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF | Environmental | Open in IMG/M |
3300005739 | Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore | Environmental | Open in IMG/M |
3300005805 | Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA | Environmental | Open in IMG/M |
3300008117 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA | Environmental | Open in IMG/M |
3300008259 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA | Environmental | Open in IMG/M |
3300008266 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA | Environmental | Open in IMG/M |
3300009068 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG | Environmental | Open in IMG/M |
3300009151 | Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG | Environmental | Open in IMG/M |
3300009152 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG | Environmental | Open in IMG/M |
3300009155 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG | Environmental | Open in IMG/M |
3300009159 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG | Environmental | Open in IMG/M |
3300009161 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG | Environmental | Open in IMG/M |
3300009183 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG | Environmental | Open in IMG/M |
3300010158 | Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG | Environmental | Open in IMG/M |
3300010354 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA | Environmental | Open in IMG/M |
3300010885 | northern Canada Lakes Co-assembly | Environmental | Open in IMG/M |
3300011339 | Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Hannam | Environmental | Open in IMG/M |
3300013372 | Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs | Environmental | Open in IMG/M |
3300017701 | Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N | Environmental | Open in IMG/M |
3300017716 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D | Environmental | Open in IMG/M |
3300017722 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N | Environmental | Open in IMG/M |
3300017723 | Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N | Environmental | Open in IMG/M |
3300017736 | Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N | Environmental | Open in IMG/M |
3300017761 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N | Environmental | Open in IMG/M |
3300017766 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D | Environmental | Open in IMG/M |
3300017774 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D | Environmental | Open in IMG/M |
3300017777 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N | Environmental | Open in IMG/M |
3300017780 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N | Environmental | Open in IMG/M |
3300017784 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N | Environmental | Open in IMG/M |
3300017785 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N | Environmental | Open in IMG/M |
3300019784 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D | Environmental | Open in IMG/M |
3300020530 | Freshwater microbial communities from Lake Mendota, WI - 22OCT2012 deep hole epilimnion (SPAdes) | Environmental | Open in IMG/M |
3300021962 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D | Environmental | Open in IMG/M |
3300022190 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N | Environmental | Open in IMG/M |
3300022407 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D | Environmental | Open in IMG/M |
3300023174 | Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505 | Environmental | Open in IMG/M |
3300027493 | Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Cont_RepB_0h | Environmental | Open in IMG/M |
3300027586 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes) | Environmental | Open in IMG/M |
3300027608 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes) | Environmental | Open in IMG/M |
3300027649 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF (SPAdes) | Environmental | Open in IMG/M |
3300027656 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes) | Environmental | Open in IMG/M |
3300027712 | Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027728 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14m | Environmental | Open in IMG/M |
3300027744 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes) | Environmental | Open in IMG/M |
3300027759 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027772 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes) | Environmental | Open in IMG/M |
3300027782 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes) | Environmental | Open in IMG/M |
3300027798 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes) | Environmental | Open in IMG/M |
3300027808 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes) | Environmental | Open in IMG/M |
3300027892 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes) | Environmental | Open in IMG/M |
3300028025 | Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC | Environmental | Open in IMG/M |
3300028569 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8m | Environmental | Open in IMG/M |
3300031707 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20 | Environmental | Open in IMG/M |
3300031758 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123 | Environmental | Open in IMG/M |
3300032046 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40 | Environmental | Open in IMG/M |
3300033233 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom | Environmental | Open in IMG/M |
3300034062 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045 | Environmental | Open in IMG/M |
3300034103 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119 | Environmental | Open in IMG/M |
3300034106 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131 | Environmental | Open in IMG/M |
3300034111 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186 | Environmental | Open in IMG/M |
3300034116 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR | Environmental | Open in IMG/M |
3300034200 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25908J49247_100638463 | 3300003277 | Freshwater Lake | MNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIERELAR* |
JGI25909J50240_10044973 | 3300003393 | Freshwater Lake | MNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIEIEVGK* |
JGI25909J50240_10980403 | 3300003393 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK* |
JGI25907J50239_10900663 | 3300003394 | Freshwater Lake | VMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK* |
JGI25926J51410_10098494 | 3300003490 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAK* |
JGI25924J51412_10319723 | 3300003491 | Freshwater Lake | MEKELKEIXEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK* |
Ga0063232_102789132 | 3300004054 | Freshwater Lake | MEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVERE |
Ga0066177_103773393 | 3300004096 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERKGMK* |
Ga0070374_101425815 | 3300005517 | Freshwater Lake | MEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVEREGMK* |
Ga0070374_104932433 | 3300005517 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK* |
Ga0049081_102677542 | 3300005581 | Freshwater Lentic | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELTK* |
Ga0049080_100862635 | 3300005582 | Freshwater Lentic | MKKELKEIDEAITNLWWSAEISDTAKLWWNDHYQEIVERELAK* |
Ga0049084_101618752 | 3300005585 | Freshwater Lentic | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEKELAK* |
Ga0076948_100388711 | 3300005739 | Lake Water | MNKEMKEIDEVLTNLWWSAEISDSAKLWWNDHYREIVEKELAK* |
Ga0079957_10528238 | 3300005805 | Lake | MSKELKEIDEALTSLWWSAEISDNAKLWWNDHYQQLMERELAR* |
Ga0114351_14005723 | 3300008117 | Freshwater, Plankton | MMASKELKEINEALTNLWWSAEISDNAKLWWNDHYQQLMERELAK* |
Ga0114841_10733848 | 3300008259 | Freshwater, Plankton | MNKELKEINEALTSLWWSAEISDNAKLWWNDHYQQLMERELAK* |
Ga0114363_10307274 | 3300008266 | Freshwater, Plankton | MKKELKEIDEAIANLWWGAEISDKAKLWWNDHYQEIVERELAK* |
Ga0114973_1002941811 | 3300009068 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK* |
Ga0114962_1001648611 | 3300009151 | Freshwater Lake | MEKELKEIDEAITNLWWAAEISDKAKLWWNDHYRLLMERELAK* |
Ga0114962_105919912 | 3300009151 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIIERELAK* |
Ga0114980_105020021 | 3300009152 | Freshwater Lake | DEAITNLWWGAEISDTAKLWWNDHYQEIIERELAK* |
Ga0114968_1002358210 | 3300009155 | Freshwater Lake | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVERELAK* |
Ga0114978_102524096 | 3300009159 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIIERELAK* |
Ga0114966_107834031 | 3300009161 | Freshwater Lake | LKELDEAITYLWWAAEISDATKLWWNDHYKLLIERELAK* |
Ga0114974_102147974 | 3300009183 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAK* |
Ga0114960_101709632 | 3300010158 | Freshwater Lake | MEKELKEIYEALTNLWWGAEISDKAKLWWNDHYQEIIERELAK* |
Ga0129333_101670743 | 3300010354 | Freshwater To Marine Saline Gradient | MSKELKEINEALTNLWWSAEISDNAKLWWNDHYQRLMERELAK* |
Ga0133913_102638258 | 3300010885 | Freshwater Lake | MEKELKEIDEALTNLWWSAEISDKAKLWWNDHYQEITERELAK* |
Ga0133913_124526825 | 3300010885 | Freshwater Lake | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQE |
Ga0153700_1022136 | 3300011339 | Freshwater | MNKDMKEIDEVLTNLWWSAEISDSAKLWWNDHYREILEKELAK* |
Ga0177922_102523351 | 3300013372 | Freshwater | EAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK* |
Ga0177922_108411273 | 3300013372 | Freshwater | MKKELKEIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK* |
Ga0181364_10283084 | 3300017701 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAR |
Ga0181364_10635263 | 3300017701 | Freshwater Lake | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVEKELAK |
Ga0181350_11011173 | 3300017716 | Freshwater Lake | KEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0181350_11312153 | 3300017716 | Freshwater Lake | MNKEMKEIDEALANLWWSAEISDRAKLWWNDHYQEIIERELAR |
Ga0181347_11888871 | 3300017722 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQE |
Ga0181362_10915823 | 3300017723 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELTK |
Ga0181365_11732961 | 3300017736 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVENLLL |
Ga0181356_11054571 | 3300017761 | Freshwater Lake | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVER |
Ga0181356_11211154 | 3300017761 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMR |
Ga0181343_10480795 | 3300017766 | Freshwater Lake | MKKELKEIDEAITNLWWSAEISDTAKLWWNDHYQEIVEKELVK |
Ga0181358_11328942 | 3300017774 | Freshwater Lake | MKKELKEIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK |
Ga0181358_11965943 | 3300017774 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREEMK |
Ga0181358_12244771 | 3300017774 | Freshwater Lake | KKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELTK |
Ga0181357_11252521 | 3300017777 | Freshwater Lake | DEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMK |
Ga0181357_12326101 | 3300017777 | Freshwater Lake | DEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMR |
Ga0181357_12452741 | 3300017777 | Freshwater Lake | EIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0181357_13403862 | 3300017777 | Freshwater Lake | MEKEMKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0181346_12057303 | 3300017780 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREGMK |
Ga0181346_12371711 | 3300017780 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERE |
Ga0181346_12719983 | 3300017780 | Freshwater Lake | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVERELA |
Ga0181348_12696321 | 3300017784 | Freshwater Lake | KELDEAITYLWWAAEISDATKLWWNDHYRLLIERELAK |
Ga0181355_11114761 | 3300017785 | Freshwater Lake | KEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0181359_10582322 | 3300019784 | Freshwater Lake | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0181359_10718421 | 3300019784 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIIERELFFS |
Ga0181359_10836854 | 3300019784 | Freshwater Lake | MEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVEREGMK |
Ga0181359_11145552 | 3300019784 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIIERELAK |
Ga0181359_11224494 | 3300019784 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELAK |
Ga0181359_11272662 | 3300019784 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0181359_12028572 | 3300019784 | Freshwater Lake | MNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIERELAR |
Ga0181359_12233563 | 3300019784 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQE |
Ga0181359_12378703 | 3300019784 | Freshwater Lake | EIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK |
Ga0181359_12726052 | 3300019784 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERKGMK |
Ga0181359_12726691 | 3300019784 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVEKELAK |
Ga0208235_10012747 | 3300020530 | Freshwater | VSKELKEINEALTSLWWSAEISDNAKLWWNDHYQQLMERELAK |
Ga0222713_106229683 | 3300021962 | Estuarine Water | MSKELKEIDEALTNLWWSAEISDNAKLWWNDHYQQLMERELAK |
Ga0181354_10597624 | 3300022190 | Freshwater Lake | MEKELKEIDEAITNLWWSAEISDKAKLWWNDHYQEITERELAK |
Ga0181354_11162833 | 3300022190 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEREREXDE |
Ga0181354_12228403 | 3300022190 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEKELAK |
Ga0181351_12478333 | 3300022407 | Freshwater Lake | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0214921_100649259 | 3300023174 | Freshwater | MEKELKEIDEALTNLWWSAEISDNAKLWWNDHYKEIME |
Ga0214921_101607908 | 3300023174 | Freshwater | GRVMEKELKEIDEALTNLWWSAEISDNAKLWWNDHYKEIMERELAK |
Ga0255103_10681383 | 3300027493 | Freshwater | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVEREEMK |
Ga0208966_10678041 | 3300027586 | Freshwater Lentic | MKKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVE |
Ga0208974_10055708 | 3300027608 | Freshwater Lentic | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIVERELTK |
Ga0208974_10069835 | 3300027608 | Freshwater Lentic | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0208974_10986044 | 3300027608 | Freshwater Lentic | MKKELKEIDEAITNLWWSAEISDTAKLWWNDHYQEIVERELAK |
Ga0208960_11480202 | 3300027649 | Freshwater Lentic | MEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVEKELAK |
Ga0209357_10830124 | 3300027656 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVE |
Ga0209499_11914453 | 3300027712 | Freshwater Lake | MEKELKEIDEAITNLWWAAEISDKAKLWWNDHYRLLMERELAK |
(restricted) Ga0247836_11341396 | 3300027728 | Freshwater | MNKEMKEIDEVLTNLWWSAEISDTTKLWWNDHYQEIVERELAK |
Ga0209355_13578162 | 3300027744 | Freshwater Lake | MNKEMKEIDEALANLWWSAEISDKAKLWWNDHYREIIERELAK |
Ga0209296_10257133 | 3300027759 | Freshwater Lake | MEKELKEIDEALTNLWWSAEISDKAKLWWNDHYQEITERELAK |
Ga0209768_103415901 | 3300027772 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELA |
Ga0209500_101766995 | 3300027782 | Freshwater Lake | MKKELKEIDEAITNLWWGAEISDTAKLWWNDHYQEIIERELAK |
Ga0209353_102998594 | 3300027798 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVER |
Ga0209354_100403328 | 3300027808 | Freshwater Lake | MEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVGREGMK |
Ga0209354_102010465 | 3300027808 | Freshwater Lake | VMEKELKEIDEALTNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0209550_106524111 | 3300027892 | Freshwater Lake | MEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERE |
Ga0247723_10447606 | 3300028025 | Deep Subsurface Sediment | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVDRELAK |
Ga0247723_11646393 | 3300028025 | Deep Subsurface Sediment | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVN |
(restricted) Ga0247843_12403192 | 3300028569 | Freshwater | MEKELKEIDEAITNLWWSAEISDKTKLWWNDHYREIVERELAK |
Ga0315291_102321194 | 3300031707 | Sediment | MEKELKEIDEALTNLWWAAEISDTTKLWWNDHYQEIVERELAK |
Ga0315907_100124598 | 3300031758 | Freshwater | MASKELKEINEALTNLWWSAEISDNAKLWWNDHYQQLMERELAK |
Ga0315289_106277784 | 3300032046 | Sediment | MEKELKEKDEAITSLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0315289_106549815 | 3300032046 | Sediment | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHDQEIVERELAK |
Ga0334722_111162013 | 3300033233 | Sediment | MEKELKEIDEAITSLWWGAEISDKAKLWWNDHYQEIVEREL |
Ga0334995_0049866_3031_3162 | 3300034062 | Freshwater | MSKELKEINEALTSLWWSAEISDNAKLWWNDHYQQLMERELAK |
Ga0335030_0381323_388_519 | 3300034103 | Freshwater | MNKEIREINEALTNLWWSAEISDNAKLWWNDHYQELMQRELAK |
Ga0335036_0518554_2_130 | 3300034106 | Freshwater | EKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
Ga0335063_0259615_504_635 | 3300034111 | Freshwater | MSKELKEINEALTNLWWSAEISDNAKLWWNDHYQRLMERELAK |
Ga0335068_0150650_1_126 | 3300034116 | Freshwater | KELKEINEALTNLWWSAEISDNAKLWWNDHYQRLMERELAK |
Ga0335065_0541346_387_539 | 3300034200 | Freshwater | MRERGRVMEKELKEIDEAITNLWWGAEISDKAKLWWNDHYQEIVERELAK |
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