NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F094913

Metagenome Family F094913

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094913
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 39 residues
Representative Sequence VGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLR
Number of Associated Samples 9
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 5
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.15
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13912zf-C2H2_6 2.86
PF00628PHD 0.95
PF13358DDE_3 0.95
PF13894zf-C2H2_4 0.95


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine Gutless Worms SymbiontHost-Associated → Annelida → Digestive System → Digestive Tube → Extracellular Symbionts → Marine Gutless Worms Symbiont100.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005652Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1Host-AssociatedOpen in IMG/M
3300005653Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1Host-AssociatedOpen in IMG/M
3300005970Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2Host-AssociatedOpen in IMG/M
3300007818Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2Host-AssociatedOpen in IMG/M
3300008215Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.1Host-AssociatedOpen in IMG/M
3300027044Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1 BERMUDA.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027624Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027658Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 2 BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027661Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Inanidrilus leukodermatus Group 1a BELIZE.1 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0056135_10000435203300005652Marine Gutless Worms SymbiontVGLGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLRSSVQR
Ga0056135_1006686313300005652Marine Gutless Worms SymbiontVGMGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTL
Ga0056135_1006776313300005652Marine Gutless Worms SymbiontLDGGPDPPMGRGKFLGENGRPIVKYRDTLRSSVQRWLNQ*
Ga0056135_1013176323300005652Marine Gutless Worms SymbiontVGPRNNVLDGGSDPPMGRGKFFGENGRSIVKYGDTLRS
Ga0056135_1018007623300005652Marine Gutless Worms SymbiontVGLGNHVLDGGPDSPMGRGKFLGENGRPIVKYRDT
Ga0056135_1019259013300005652Marine Gutless Worms SymbiontMGGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLRSSVQRW
Ga0056135_1021895233300005652Marine Gutless Worms SymbiontVGPGNHVLDGVQIPHGKGQFFEGEGRPIVKYRDTLRSSLCKNG*
Ga0056135_1024197023300005652Marine Gutless Worms SymbiontVGPDNLVLDGGSETPMGRGNFLEKERPIVKYRDTLRS
Ga0056135_1029558623300005652Marine Gutless Worms SymbiontMGLGNHVLDGSPDPPMGRGKFLGENRRPIVKYRDTLR
Ga0056135_1030190623300005652Marine Gutless Worms SymbiontVGLGNHVLDGGPDPRMERGKFFGENGRPIVKYRDTLRSSVQ
Ga0056135_1036787813300005652Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRDKFLGENWRPIVKYRDTL
Ga0056135_1037059913300005652Marine Gutless Worms SymbiontVLDGGPDPPMGRGKFLGENGRPIVKYRDTLRSSVQRRLNQ*
Ga0056135_1038482113300005652Marine Gutless Worms SymbiontVGPGNHVLDGVQIPPPWERANFGENGRPIVKYRDTLRSSVQR
Ga0056135_1041621513300005652Marine Gutless Worms SymbiontGPDPPMGRGKFFGENGRPIVKYRDTLRSSVQRRLNR*
Ga0056135_1045441113300005652Marine Gutless Worms SymbiontVLDGGPDPPMGRGKFLGENGRPIVKYRDTLRSSVQRRLN*
Ga0056135_1050564013300005652Marine Gutless Worms SymbiontVLDEGPDPLMGMGKFLGENGRPIVKYRDTLRSSVQR
Ga0056135_1055685613300005652Marine Gutless Worms SymbiontMGPGNHVLDGGPDPPMGRRKFLRENGRPIVKYRDTLRSSV
Ga0056133_1004192823300005653Marine Gutless Worms SymbiontVLDEGPDPLMGMGKFLGENGRPIVKYRDTLRSSVQRRLIR*
Ga0056133_1020667413300005653Marine Gutless Worms SymbiontSGLRTWLGPRDHVLDGGSGPPMGRGKFWGENGRPIVKYTDFLPCFVRIG*
Ga0056133_1022752713300005653Marine Gutless Worms SymbiontTWVGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLR*
Ga0056133_1023082313300005653Marine Gutless Worms SymbiontVGPGNYVLNGGPDRPMGRGNFEGEGRPIVKYRDTLWSSVQR
Ga0056133_1037452923300005653Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPWEGANFFGENGRPIVKYRDTLRSSVQ
Ga0056133_1038317113300005653Marine Gutless Worms SymbiontVGPGNHVLDGGSRSPMGRGKFLGENGRPIVKYMDTL
Ga0056134_1000300123300005970Marine Gutless Worms SymbiontVLDEGPDPLMGMGKFWGENGRPIVKYRDTLRSSVQRRLNR*
Ga0056134_1001824443300005970Marine Gutless Worms SymbiontVGLRNHVLDGGPDPPMGRGKFFGENGRPIVKYRDTLRSS
Ga0056134_1012511213300005970Marine Gutless Worms SymbiontVGPGNHVLDGGIDAPMGRGKFFGENGRPIVKYRDTLR
Ga0056134_1015623223300005970Marine Gutless Worms SymbiontVGPGNDVLDRGPDPPPMGRGNFFFGGGENGRPIVKYR
Ga0056134_1018584213300005970Marine Gutless Worms SymbiontVLDGGPDPPMGRGKFLGENGRPIVKYRDTLRSSVQR
Ga0056134_1030243023300005970Marine Gutless Worms SymbiontVGPGNIVLDGGPDPPMGRGKFLGENGRPIVKYGDTL
Ga0056134_1035109223300005970Marine Gutless Worms SymbiontVGPGNHVLDGAPDPPIGRGNFFGGGENRRPIVKYRDTLRSSVQRRLN
Ga0056134_1037001013300005970Marine Gutless Worms SymbiontMNHVLDGRFRSPMARGHFERTGRPIVKYRDTLRSS
Ga0056109_108909423300007818Marine Gutless Worms SymbiontVDPGNHVLDVGPHPPMGRGNFGGEGRPIIKYRITLRSSLQKPLN
Ga0056109_110436913300007818Marine Gutless Worms SymbiontVGPGNHVLDGSPNPPMGRGKFLGENGRPIVKYRDTLRSSVQR
Ga0056109_112075413300007818Marine Gutless Worms SymbiontLGPRDHVLDGGSDPPMGRGKFWGENGRPIVKYRDFLPCSVHIG*
Ga0056108_102163453300008215Marine Gutless Worms SymbiontVGSGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLR
Ga0056108_107102313300008215Marine Gutless Worms SymbiontVGQGNHVLDGRLDHLMGRGKLGGGRPIVKYRDTLR
Ga0056108_111334223300008215Marine Gutless Worms SymbiontVGPGNHILDGGPDPPMGRGKFLGENGRPIVKYRNTL
Ga0056108_116569523300008215Marine Gutless Worms SymbiontVGPGNHVSDGVQIPHGKGQFFGENGRPIVKYRDTLR
Ga0056108_118434613300008215Marine Gutless Worms SymbiontVGPGNHVLDGGSNPPWEGAIFLGEGNGRPIVKYRDTLR
Ga0056108_118487213300008215Marine Gutless Worms SymbiontVGPGNYVFDGSPDPPMGRGNFLGENGRPIVKYRDTL
Ga0056108_121455723300008215Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRDKFLGENGRPIVKYRDTLRSSVQRRLN
Ga0056108_125594713300008215Marine Gutless Worms SymbiontVGSGNHVFDGGPDPPMGMGKFLGENGRPIVKYRDTLR
Ga0056108_126603423300008215Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDT
Ga0056108_127423013300008215Marine Gutless Worms SymbiontVGPRDHVLDGGSDHPMGRGKFFGENGRPIVKYRDILR
Ga0056108_128682413300008215Marine Gutless Worms SymbiontVGPENHALHGSPDPPMGRGKFLGENGRPIVKYRDTPR
Ga0056108_128686513300008215Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPWEGAIFFGENGRPIVKYIGTLYG
Ga0056108_131526313300008215Marine Gutless Worms SymbiontVGLGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLR
Ga0056108_132537613300008215Marine Gutless Worms SymbiontVDAGNHVLDGGPDPPMGRSKFLGENGRPIVKYRDTLRSSVQRRLN
Ga0056108_135502723300008215Marine Gutless Worms SymbiontNHVLDGGPDPPMGRGKFFGENGRPIVKYRDTLWSSVQRRLN*
Ga0056108_136087513300008215Marine Gutless Worms SymbiontVGPGKHVLDGGPDPPMGRGKFWGENGRPIVKYRDTLRSSVQR
Ga0056108_137019113300008215Marine Gutless Worms SymbiontLGGPGENVLDGGTDPPMGRGKFLGENGRPIVKYRDTLR
Ga0056108_139083913300008215Marine Gutless Worms SymbiontVGPGNHVLGGGGSISPMGRGKFLGENGRPIVKYRDTLRSSV
Ga0056108_139773013300008215Marine Gutless Worms SymbiontVDPGNHVLDGGPNPPMGRGKFLGENGRPIVKYRDTLRSSVQRWLNR
Ga0056108_145087213300008215Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRVTLR
Ga0056108_146817213300008215Marine Gutless Worms SymbiontVGLGNHVLDGGPDPPMGRGKFFGENGRPIVKYRDTLW
Ga0056108_148533713300008215Marine Gutless Worms SymbiontDPPMGRGKFLGENGHPIVKYRDILRSSRERRLNR*
Ga0209785_102298113300027044Marine Gutless Worms SymbiontVGPGNHALDGGPDPSTGRDNFEGAKGRPIMKYRDTLRSSVQKRLN
Ga0209785_102328213300027044Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPTGRGTFFGENGRPIVKYRDTLR
Ga0209789_1001395413300027624Marine Gutless Worms SymbiontVGPGNHVLDGGPDPLMGRGKFFGENGHPVVKYRDTLRSSVQR
Ga0209789_1003662013300027624Marine Gutless Worms SymbiontVVPGNRVLDGGPDPPMGRCKFLGENGRPIVKYRDTLRSSVQRRLN
Ga0209789_1016609413300027624Marine Gutless Worms SymbiontVGPGNHVLDGSPDPPMGRGKFLWENGRPIVKYRDTLR
Ga0209789_1019958323300027624Marine Gutless Worms SymbiontVGPGNHALDGGPDSSTGRDNFEGAKGRPIMKYRDTLW
Ga0209789_1021657013300027624Marine Gutless Worms SymbiontVGPRDYVLDGGSDPPMGRGKFLGENGRPIVKYRDILR
Ga0209789_1022437313300027624Marine Gutless Worms SymbiontVGPGNHVLDGVQIPLGRGNFKGAKPIAKYRDTLRSSVQKRL
Ga0209789_1022783213300027624Marine Gutless Worms SymbiontVGLGNHVLDVGPDSPMGRGKFLEENGRTIVKYRDTLRSSVQR
Ga0209789_1023624413300027624Marine Gutless Worms SymbiontVGPGNHVLDGSPDPPMGRGKFFGENGRPIVKYRDTLRSSVQRR
Ga0209789_1024545013300027624Marine Gutless Worms SymbiontVGQGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDT
Ga0209789_1032814813300027624Marine Gutless Worms SymbiontNHVLDGGSDPPMGRGKFFGGENGRPVVKYRVTIRSSVQRRLNR
Ga0209789_1034529113300027624Marine Gutless Worms SymbiontVGPGNHVLDGVQIPPMGMGDFEGERRPVVKYRDTLRSSM
Ga0209259_103379313300027658Marine Gutless Worms SymbiontVGLGNHVLDGVQIPHGKGQIFGENGRPVVKYRDTLR
Ga0209259_104023613300027658Marine Gutless Worms SymbiontVGPGNHVLDGGPDAPMGMGNFEGGKGHPIVKYRDTLR
Ga0209259_104978723300027658Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLR
Ga0209259_105161033300027658Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRGKFFGENGRPIVKYRDTLR
Ga0209259_110566313300027658Marine Gutless Worms SymbiontSEMPSGLRTWLGPRDHVLDGGSGPPMGRGKFWGENGRPIVKYTDFLPCFVRIG
Ga0209259_113988833300027658Marine Gutless Worms SymbiontVGLGNRVLDGCPDPPTGRGKFLGENGRPIVKYRDTLRSSVQR
Ga0209259_115692813300027658Marine Gutless Worms SymbiontVFPGNHVLDGGPDPPMGRGKFFGENVRPIVKYRDTLR
Ga0209259_115798113300027658Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTLRSSVQRR
Ga0209259_118444513300027658Marine Gutless Worms SymbiontVGPGNHVPDGGPDPPIGRGNFEGGKGRPIVKYRDTLRS
Ga0209259_120744213300027658Marine Gutless Worms SymbiontVGPRNHVLDGGPDPPMGRGKFEGGKGRPIVKYRDTLWSSVHKW
Ga0209259_123481513300027658Marine Gutless Worms SymbiontLGPRDHVLDGSSDYPMGKGKFWGENGRPIVKYRDFLSCSVQIG
Ga0209259_124487513300027658Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDTTVICAK
Ga0209259_131071813300027658Marine Gutless Worms SymbiontVGLGNHVLDGGPDPHGKGQIFGENGRPIVKYRDALR
Ga0209259_133284713300027658Marine Gutless Worms SymbiontVGPGNHVLDGGPDPLMGRGKFLGENGRPIVKYRDTLR
Ga0209259_134922423300027658Marine Gutless Worms SymbiontHVLDGDSDPTMGRGKFWGENGRPIVKYKDFLPCSVQIG
Ga0209259_136250413300027658Marine Gutless Worms SymbiontVGPGNHVLDGGSRSPMGRGKFLGENGRPIVKYMDT
Ga0209259_143182013300027658Marine Gutless Worms SymbiontVGPGNHVLDGAPDPPIGRGKFLGENGHPIVKYRDTLR
Ga0209459_1001774923300027661Marine Gutless Worms SymbiontVLDEGPDPLMGMGKFLRENGHPIVKYRDTLRSSVQRRLNR
Ga0209459_1002017913300027661Marine Gutless Worms SymbiontVLDGGPDPTMGRGKFLGENGRPIVKSRDTLRSSVQRRLN
Ga0209459_1004156013300027661Marine Gutless Worms SymbiontGPGNHVLDGGPDPPHGKGKGSPIVKYRDFLPCAVQIG
Ga0209459_1004319913300027661Marine Gutless Worms SymbiontVGPGNHVLDLDGGPDTPMGRRKFLGENGRPIVKYRD
Ga0209459_1006166713300027661Marine Gutless Worms SymbiontVGPGNHLLDLGPDLPMERGKFLGENGRPIVKYTDTLR
Ga0209459_1007385413300027661Marine Gutless Worms SymbiontVGMGNHVLDGGPDPPMGRGKFLGENGRPIVKYRDT
Ga0209459_1011329713300027661Marine Gutless Worms SymbiontVGPANHVLDGGPDPPMGRGKFLGENGRPIVKCRTLYGRLCK
Ga0209459_1013323613300027661Marine Gutless Worms SymbiontVGPDNLVLDGGSETPMGRGNFLEKERPIVKYRDTLRSSW
Ga0209459_1014743813300027661Marine Gutless Worms SymbiontVGPGNHVLDGGSDPPWKGANFWGKNGRPIVKYRDTLRSSVQRRLN
Ga0209459_1016270123300027661Marine Gutless Worms SymbiontVFPGNHVLDGGPDPPMGRGKFFGENGRPIVKYRDTL
Ga0209459_1023239013300027661Marine Gutless Worms SymbiontVGPGKHVLDGGPDPPMGRGKFLEENGRPIVKYRDTLRSS
Ga0209459_1023880413300027661Marine Gutless Worms SymbiontVGPRNHVLDGGPDPLMGRGKFLGENGRPIVKYRNTLRSSVQR
Ga0209459_1024917523300027661Marine Gutless Worms SymbiontSKDHVLDGRSDPPWEGANFWGKNGRSIMKHRDILRSSVARRLNR
Ga0209459_1026530513300027661Marine Gutless Worms SymbiontVLDGGPDPPTGRGIFLGENGRPIVKYRDTLRSSVHRRLNR
Ga0209459_1031214813300027661Marine Gutless Worms SymbiontMGPGNRVLDGSPDSPMGRGKFLGENGRPIVKYRDTLRSSVQRRLN
Ga0209459_1031337713300027661Marine Gutless Worms SymbiontMGTRNHVLDGGPDPPWEREILGKGRPIVKYRDTQRSSVQK
Ga0209459_1033891413300027661Marine Gutless Worms SymbiontVGPGNHVLDGGPDPPWEGAKFLGENGHLIVTYRDTLR
Ga0209459_1041154513300027661Marine Gutless Worms SymbiontVGPGNHVLDGSPDLLMGRGNFDGEKRHPIEKYRDT
Ga0209459_1043671113300027661Marine Gutless Worms SymbiontMGPGNHVLDGGPDPPMGRRKFLRENGRPIVKYRDTLRSSVQRLLNR

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