Metagenome Family F094988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094988
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	62 residues
Representative Sequence	MSRKPQQPPQRTKWHVYKLAAKREWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR
Number of Associated Samples	69
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.65 %
% of genes near scaffold ends (potentially truncated)	26.67 %
% of genes from short scaffolds (< 2000 bps)	78.10 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (83.810 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (45.714 % of family members)
Environment Ontology (ENVO)	Unclassified (38.095 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.381 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.44% β-sheet: 25.58% Coil/Unstructured: 56.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07813	LTXXQ	3.81
PF02265	S1-P1_nuclease	1.90
PF13474	SnoaL_3	1.90
PF01323	DSBA	1.90
PF00072	Response_reg	0.95
PF12852	Cupin_6	0.95
PF13430	DUF4112	0.95
PF01381	HTH_3	0.95
PF08448	PAS_4	0.95
PF13546	DDE_5	0.95
PF01436	NHL	0.95
PF01068	DNA_ligase_A_M	0.95
PF12680	SnoaL_2	0.95
PF03466	LysR_substrate	0.95
PF01710	HTH_Tnp_IS630	0.95
PF07536	HWE_HK	0.95
PF07969	Amidohydro_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	15.24
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.95
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.95
COG3415	CRISPR-associated protein Csa3, CARF domain	Defense mechanisms [V]	0.95
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.95
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
All Organisms	root	All Organisms	16.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
cellular organisms	root	All Organisms → cellular organisms	16.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	16.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.86 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.90 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.86 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.90 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	83.81 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.90 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.95 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.95 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10182775	Not Available	557	Open in IMG/M
3300002914\|JGI25617J43924_10106083	Not Available	1001	Open in IMG/M
3300002917\|JGI25616J43925_10059581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1633	Open in IMG/M
3300002917\|JGI25616J43925_10194708	Not Available	787	Open in IMG/M
3300005174\|Ga0066680_10439393	Not Available	825	Open in IMG/M
3300005181\|Ga0066678_11008544	Not Available	539	Open in IMG/M
3300005332\|Ga0066388_103890327	Not Available	762	Open in IMG/M
3300005332\|Ga0066388_104229765	Not Available	732	Open in IMG/M
3300005332\|Ga0066388_104816793	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005471\|Ga0070698_100316847	Not Available	1490	Open in IMG/M
3300005552\|Ga0066701_10971092	Not Available	502	Open in IMG/M
3300005555\|Ga0066692_10510161	Not Available	764	Open in IMG/M
3300005764\|Ga0066903_101068605	Not Available	1484	Open in IMG/M
3300005764\|Ga0066903_103240688	Not Available	880	Open in IMG/M
3300005764\|Ga0066903_107844567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	549	Open in IMG/M
3300007255\|Ga0099791_10002281	Not Available	7732	Open in IMG/M
3300007255\|Ga0099791_10011752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3674	Open in IMG/M
3300007258\|Ga0099793_10100988	Not Available	1335	Open in IMG/M
3300007258\|Ga0099793_10163825	Not Available	1057	Open in IMG/M
3300007265\|Ga0099794_10135004	Not Available	1247	Open in IMG/M
3300007788\|Ga0099795_10638878	Not Available	509	Open in IMG/M
3300009143\|Ga0099792_10039922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2232	Open in IMG/M
3300009143\|Ga0099792_10128524	Not Available	1370	Open in IMG/M
3300009792\|Ga0126374_10791278	Not Available	723	Open in IMG/M
3300009792\|Ga0126374_11403978	Not Available	569	Open in IMG/M
3300010046\|Ga0126384_12132352	Not Available	538	Open in IMG/M
3300010047\|Ga0126382_12513662	Not Available	502	Open in IMG/M
3300010358\|Ga0126370_10967201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300010358\|Ga0126370_12601277	Not Available	506	Open in IMG/M
3300010359\|Ga0126376_11179689	Not Available	779	Open in IMG/M
3300010359\|Ga0126376_13120713	Not Available	513	Open in IMG/M
3300010360\|Ga0126372_10332847	Not Available	1352	Open in IMG/M
3300010360\|Ga0126372_10384164	Not Available	1274	Open in IMG/M
3300010360\|Ga0126372_10606197	Not Available	1052	Open in IMG/M
3300010360\|Ga0126372_10676361	Not Available	1003	Open in IMG/M
3300010360\|Ga0126372_10681236	Not Available	1000	Open in IMG/M
3300010362\|Ga0126377_10746094	Not Available	1034	Open in IMG/M
3300010362\|Ga0126377_11690624	Not Available	708	Open in IMG/M
3300011269\|Ga0137392_10036135	Not Available	3627	Open in IMG/M
3300011269\|Ga0137392_10953096	Not Available	706	Open in IMG/M
3300011271\|Ga0137393_10954271	Not Available	731	Open in IMG/M
3300012096\|Ga0137389_10752223	Not Available	837	Open in IMG/M
3300012199\|Ga0137383_10127094	Not Available	1861	Open in IMG/M
3300012202\|Ga0137363_10145774	Not Available	1855	Open in IMG/M
3300012202\|Ga0137363_11081116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	682	Open in IMG/M
3300012202\|Ga0137363_11124969	Not Available	668	Open in IMG/M
3300012203\|Ga0137399_10117968	Not Available	2080	Open in IMG/M
3300012205\|Ga0137362_10041663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3704	Open in IMG/M
3300012205\|Ga0137362_10232464	Not Available	1591	Open in IMG/M
3300012205\|Ga0137362_10978222	Not Available	721	Open in IMG/M
3300012208\|Ga0137376_10812684	Not Available	804	Open in IMG/M
3300012208\|Ga0137376_10999185	Not Available	717	Open in IMG/M
3300012361\|Ga0137360_10027948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3867	Open in IMG/M
3300012361\|Ga0137360_10099556	Not Available	2221	Open in IMG/M
3300012362\|Ga0137361_10535215	Not Available	1075	Open in IMG/M
3300012685\|Ga0137397_10096279	Not Available	2165	Open in IMG/M
3300012917\|Ga0137395_10283971	Not Available	1169	Open in IMG/M
3300012918\|Ga0137396_10029702	Not Available	3603	Open in IMG/M
3300012918\|Ga0137396_10386045	Not Available	1038	Open in IMG/M
3300012918\|Ga0137396_10576599	Not Available	833	Open in IMG/M
3300012923\|Ga0137359_10398067	Not Available	1221	Open in IMG/M
3300012927\|Ga0137416_11860838	Not Available	550	Open in IMG/M
3300012930\|Ga0137407_11877451	Not Available	571	Open in IMG/M
3300012944\|Ga0137410_10014911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5293	Open in IMG/M
3300012971\|Ga0126369_11312400	Not Available	814	Open in IMG/M
3300015054\|Ga0137420_1243298	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300015241\|Ga0137418_10071974	Not Available	3151	Open in IMG/M
3300015241\|Ga0137418_10139470	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300015242\|Ga0137412_10249122	Not Available	1406	Open in IMG/M
3300015245\|Ga0137409_10011056	All Organisms → cellular organisms → Bacteria	9109	Open in IMG/M
3300015245\|Ga0137409_10021901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6284	Open in IMG/M
3300016404\|Ga0182037_11928361	Not Available	529	Open in IMG/M
3300017970\|Ga0187783_10191005	Not Available	1506	Open in IMG/M
3300017970\|Ga0187783_10284857	Not Available	1206	Open in IMG/M
3300018468\|Ga0066662_10791960	Not Available	918	Open in IMG/M
3300018468\|Ga0066662_11637283	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300020199\|Ga0179592_10037106	Not Available	2206	Open in IMG/M
3300021086\|Ga0179596_10004978	Not Available	3941	Open in IMG/M
3300021086\|Ga0179596_10212311	Not Available	945	Open in IMG/M
3300021086\|Ga0179596_10647875	Not Available	535	Open in IMG/M
3300026304\|Ga0209240_1020576	Not Available	2525	Open in IMG/M
3300026340\|Ga0257162_1022393	Not Available	763	Open in IMG/M
3300026355\|Ga0257149_1058916	Not Available	558	Open in IMG/M
3300026356\|Ga0257150_1004024	Not Available	1948	Open in IMG/M
3300026358\|Ga0257166_1010965	Not Available	1118	Open in IMG/M
3300026361\|Ga0257176_1032749	Not Available	787	Open in IMG/M
3300026446\|Ga0257178_1047998	Not Available	555	Open in IMG/M
3300026481\|Ga0257155_1022260	Not Available	914	Open in IMG/M
3300026481\|Ga0257155_1061541	Not Available	596	Open in IMG/M
3300026482\|Ga0257172_1001062	Not Available	3145	Open in IMG/M
3300026482\|Ga0257172_1083462	Not Available	587	Open in IMG/M
3300026489\|Ga0257160_1019661	Not Available	1057	Open in IMG/M
3300026494\|Ga0257159_1063157	Not Available	634	Open in IMG/M
3300026496\|Ga0257157_1066606	Not Available	615	Open in IMG/M
3300026498\|Ga0257156_1091873	Not Available	631	Open in IMG/M
3300026507\|Ga0257165_1087290	Not Available	576	Open in IMG/M
3300026514\|Ga0257168_1053784	Not Available	884	Open in IMG/M
3300026551\|Ga0209648_10007234	All Organisms → cellular organisms → Bacteria → Proteobacteria	9543	Open in IMG/M
3300026551\|Ga0209648_10110171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	2241	Open in IMG/M
3300027512\|Ga0209179_1046688	Not Available	921	Open in IMG/M
3300027512\|Ga0209179_1118209	Not Available	592	Open in IMG/M
3300027671\|Ga0209588_1172503	Not Available	680	Open in IMG/M
3300027903\|Ga0209488_10080710	Not Available	2420	Open in IMG/M
3300032180\|Ga0307471_100930354	Not Available	1037	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.48%
Loam	Environmental → Terrestrial → Soil → Loam	7.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	60.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	45.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_101827751	3300002907	Grasslands Soil	MPRKPQQPSQRTKWHVYLQARAARREWVAEIEAVDEREAIEIAAKELKQPAKKLMAVQRR
JGI25617J43924_101060833	3300002914	Grasslands Soil	ATYLAANTGGMPRKPQQPSQRTKWHVYLQARAARREWVGEIEAVDEREAIVIAAKEFKQPAKKLIATQRR*
JGI25616J43925_100595811	3300002917	Grasslands Soil	MPRKPQQXSQRTKWHVYLQARAARREWVGEIEAVDEREAIVIAAKEFKQPAKKLIATQRR
JGI25616J43925_101947082	3300002917	Grasslands Soil	MSRKPQQRPLRTTWHVYLQTRTARPEWVGEIKAVDERKAIEIAAKEFKQPASKLIAVPRR
Ga0066680_104393932	3300005174	Soil	MPRKPQQPPQRTKWYVYYRLAARREWVGEIEAVDEREAIEIAAKEFKQPARKLMAERRR*
Ga0066678_110085441	3300005181	Soil	MSRRQQQPPQPAKAKWHVYKLAAKRQWVGEIEAVDEREAIEVAAKEFKQPETKLMAVRRR
Ga0066388_1038903271	3300005332	Tropical Forest Soil	LRPILPGTSRKPQQPPQPKIKWHVYRLAAKRQWVGEIEAVDEREAIEKAAKEFKQPAKKLMAVQRP*
Ga0066388_1042297652	3300005332	Tropical Forest Soil	MARKPQQPPQQTKWHVYRKIAARREWVGEIKAVDEHEAIKIAAKEFKQPAT
Ga0066388_1045590522	3300005332	Tropical Forest Soil	RTKWHVYLQARAAKLEWVGEIEAADEREAIEIAAKEFKQPAKKLIAVQLR*
Ga0066388_1048167931	3300005332	Tropical Forest Soil	MSSKPQPSPQRTKWHVYLQARAAKREWVGEIEAVDEREAIEIAAKEFKQPARKLMAVQRK
Ga0070698_1003168474	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRKPQQPSQQTKWHVYLQARAARREWVGEIEAVDERPAIEIAAKEFKQPAKKLIATQRR
Ga0066701_109710922	3300005552	Soil	LLVLTLRPILPAMSRKPQPPQPTKTKWHVYKLAAKREWVGEIEAVDEREVIEIAAKEFKQPAKKLMAMQR
Ga0066692_105101611	3300005555	Soil	RKPQQPPQRTKWHIYYGLAARREWVGEIEAVDERGAIEIAAKEFKQPARKLMAERQR*
Ga0066903_1010686052	3300005764	Tropical Forest Soil	MFRKPQQRTRWHVYLQARAAKREWVGEIEAVDEREAIEIAAKEFKRPAKKLIAVQLR*
Ga0066903_1032406882	3300005764	Tropical Forest Soil	MPRKPQQPQQRTKWHVYLQARAAKLEWVGEIEAADEREAIEIAAKEFKQPAKK
Ga0066903_1078445672	3300005764	Tropical Forest Soil	ANTCSMPRKPQQPSQQTKWHVYRKIAARREWVGEIKAGDEREAIKIAAKEFKQPENKLVLLSHKATSGGF*
Ga0099791_100022818	3300007255	Vadose Zone Soil	MPRKPRQPSQRTKWHVYYKLAAKLEWVGEIEAVDEHKAIEIAAKEFKEPAKKLISVQRR*
Ga0099791_100117523	3300007255	Vadose Zone Soil	MSRKPQPPQPTKTKWHVYKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRQ*
Ga0099793_101009882	3300007258	Vadose Zone Soil	MSRKPQQPPQPTKTRWHVYRLAAKRQWVGEIEAVDEREAIEIAAKELKQPAKKLMAVPRR
Ga0099793_101638252	3300007258	Vadose Zone Soil	LPARGLVAATYLAANTGGIPRKPQQPSQRTKWHVYLQARAARREWVAEIEAVDEREAIEIAAKELKQPAKKLMAVQRR*
Ga0099794_101350043	3300007265	Vadose Zone Soil	MPRKPRQPPQRTKWHVYYKLAAKLEWVGEIEAVDEHKAIEIAAKEFKEPAKKLISVQRR*
Ga0099795_106388781	3300007788	Vadose Zone Soil	MSRKPQQPPQPTKTRWHVYRLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKK
Ga0099792_100399223	3300009143	Vadose Zone Soil	MSRKPQPPQPTKTKWHVYKLAAKRQWVGEIEAVDELEAIEIAAKEFKQPAKKLMAVQRR*
Ga0099792_101285241	3300009143	Vadose Zone Soil	MSRKPQQPPQRTKWHVYKLAAKREWVGEIEAVDEREAIEIAAKEFRQPAKKLMAVPRR*
Ga0126374_107912781	3300009792	Tropical Forest Soil	MSRKPQPPPQRTKWHVYLQGRTARREWVGEIEAFDQREAIEIAAKEFKQPAKKLIAVQL
Ga0126374_114039781	3300009792	Tropical Forest Soil	MSRKPQQPPQRTKWHVYKLAAKRQWVGEIEAVDEREASEIAAKEFKQPAKKL
Ga0126384_121323522	3300010046	Tropical Forest Soil	MSRKPQQPLQRTKWHVYLQARAAKREWVGEIEAVDEREAIEIAAKEFKQPVRKLMAVQRK
Ga0126382_125136621	3300010047	Tropical Forest Soil	MPRKRQPPPRPTKTKWHVYKLAAKREWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR
Ga0126370_109672012	3300010358	Tropical Forest Soil	MSRKPQQPQQRTRWHVYLQARAAKREWVGEIEAFDEREAIEIAAKEFKQPAKKLIAVQL*
Ga0126370_126012771	3300010358	Tropical Forest Soil	MSRKPQQPLQRTKWHVYLQARAAKREWVGEIEAVDEREAIEIAAKEFKQPARKLMAVQRK
Ga0126376_111796891	3300010359	Tropical Forest Soil	LPCSQYCRMSRKPQQPQQRTRWHVYLQARAAKREWVGEIEAVDEREAIEIAAKEFRQPAKKLIAVQRR*
Ga0126376_131207131	3300010359	Tropical Forest Soil	MSRKPQPPPQRTKWHVYLQGRTARREWVGEIEAFDQREAIEIAAKEFKQPAKKLIAVQL*
Ga0126372_103328471	3300010360	Tropical Forest Soil	MPRKPQQPSQQTKWHVYRKIAARREWVGEIKAGDEREAIKIAAKEFKQPANKLVAVPRQGR*
Ga0126372_103841642	3300010360	Tropical Forest Soil	MSRKPQQPLQRTKWHVYLQARAAKREWVGEIEAVDEREAIEIAAREFKQPARKLIAVQLR
Ga0126372_106061971	3300010360	Tropical Forest Soil	MARKPQQPPQRTKWHVYYKLAARREWVGEIEAVDEREAIEMAAKEFRQPAKKLMAVQRR*
Ga0126372_106763612	3300010360	Tropical Forest Soil	MPRKPQQPQQRTKWHVYLQARAAKLEWVGEIEAVDEREAIEIAAKEFKQPAKKLIAVQLRRR*
Ga0126372_106812362	3300010360	Tropical Forest Soil	MSRKPQQSPQPKIKWHVYKLAAKRQWVGEIEAVDEREAIEKAAKEFKQPAKKLMAVQRP*
Ga0126377_107460942	3300010362	Tropical Forest Soil	MSREPQQPPKRTKWHVYLQARAAKLEWVGEIEAVDERDAIEIAAKEFKVDAWRLIAVQRR
Ga0126377_116906242	3300010362	Tropical Forest Soil	MSRKPQQPPQRTKWHVYKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVRQR*
Ga0137392_100361352	3300011269	Vadose Zone Soil	LPARGLVAATYLAANTGGIPRKPQQPSQRTKWHVYLQARAARREWVAEIEAVDEREAIEIAAKEFKQPAKKLIATQRR*
Ga0137392_109530963	3300011269	Vadose Zone Soil	MSRNPQPPQPTKTRWHVYLHARAAGREWVGEIEAINEREAIQIAAKEFKQPANKLIAVARR*
Ga0137393_109542713	3300011271	Vadose Zone Soil	MSRKPQQPPQRTKWHVYKLAAKREWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR*
Ga0137389_107522231	3300012096	Vadose Zone Soil	MPRKPQQPPQPTKTKWHVYKLAAKRQWVGEIEAVDEREAIEIAAKEFKQHASKLVAVRK*
Ga0137383_101270943	3300012199	Vadose Zone Soil	MTRKPQQPPQPTKTKWHVYKLAVKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR
Ga0137363_101457744	3300012202	Vadose Zone Soil	MSRKPQQPPQRTKWHVYKLAAKREWVGEIEAVDEREAIEIAAKEFKQPVKKLMVVPR*
Ga0137363_110811161	3300012202	Vadose Zone Soil	RYLPCGQYCRMPRKQKQPPRRTKWHVYYKLPPRREWVGEIKAVDEREAIEIAAKEFKQPAKKLMAVPRQ*
Ga0137363_111249693	3300012202	Vadose Zone Soil	SRKPQQPPPPTKTKWHVFKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRP*
Ga0137399_101179683	3300012203	Vadose Zone Soil	MSRKPQQPPQPTKTRWHVYRLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRQ
Ga0137362_100416638	3300012205	Vadose Zone Soil	MSRKPQQPPPPTKTKWHVFKLAAKRQWVGEIEAVDEREAIEVAAKEFKQPETKLMAVRRR
Ga0137362_102324642	3300012205	Vadose Zone Soil	MSRKLQPPQPTKTRCHVYKLAAKRQWGGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRP*
Ga0137362_109782221	3300012205	Vadose Zone Soil	MPRKQKQPPRRTKWHVYYKLPPRREWVGEIKAVDEREAIEIAAKEFKQPAKKLMAVPRQ*
Ga0137376_108126842	3300012208	Vadose Zone Soil	MPRKPQQPPQRTKWHVYYRLAARREWVGEIEAVDEREEMEIAAKEFKQPAKKLMAVQRR*
Ga0137376_109991853	3300012208	Vadose Zone Soil	GPILTGMSRRQQQPPQPAKAKWHVYKLAAKRQWVGEIEAVDEREAIEVAAKEFKQPETKLMAVRRR*
Ga0137360_100279486	3300012361	Vadose Zone Soil	MSRKPQQPPPPTKTKWHVFKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRRDQRV*
Ga0137360_100995562	3300012361	Vadose Zone Soil	MSRKLQPPQPTKTKWHVYKLAAKRQWGGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRP*
Ga0137361_105352152	3300012362	Vadose Zone Soil	MPRKPQQPSQRTKWHVYLQARAARREWVGEIEAVDERQAIEIAAKEFKQPAKKLIATQRR
Ga0137397_100962795	3300012685	Vadose Zone Soil	MPRKPQQPPQPTETKWHVYKLAAKRQWVGEIEAVEERDAIKIAAKEFKQPAKKLMAVQRQ
Ga0137395_102839711	3300012917	Vadose Zone Soil	QQPPQRTKWHVYKLAAKREWVGEIEAVDEREAIEIAAKEFKQPVKKLMVVPR*
Ga0137396_100297023	3300012918	Vadose Zone Soil	MPRKPRQPPQRTKWHVYYKLAAKLEWVGEIEAVDEHKAIEIEAKEFKEPAKKLISVQRR*
Ga0137396_103860451	3300012918	Vadose Zone Soil	LPGMSRKPQQPSQPTKTRWHVYKLAKRRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR*
Ga0137396_105765993	3300012918	Vadose Zone Soil	MPRKPQQPSQQTKWHVYLQARAARREWVGEIEAVDERQAIEIAAQEFKQPAKKLIATQRR
Ga0137359_103980674	3300012923	Vadose Zone Soil	VAATYLAANTGGMPRKPQQPSQQTKWHVYLQARAARREWVGEIEAVDERPAIEIAAKEFKQPAKKLIATQRR*
Ga0137416_118608381	3300012927	Vadose Zone Soil	RKPQQPSQQTKWHVYLQARAARREWVGEIEAVDERQAIEIAAKEFKQPAKKLIATQRR*
Ga0137407_118774511	3300012930	Vadose Zone Soil	MPRKPQQPPQRTKWHVYYRLAARREWVGEIEAVDEREAIEIAAKEFKQP
Ga0137410_100149115	3300012944	Vadose Zone Soil	MSRKPQPPQPTKTTKTRWHVYKLAAKRQWVGEIEAVEEREAIKIAAKEFKQSAKKLMAVPRR*
Ga0126369_113124001	3300012971	Tropical Forest Soil	CGQYCRMSRKPQQPQPRTKWHVYLQARAAKREWVGEIEAVDEREAIEIAAKEFKQPAKKLIAVQLR*
Ga0137420_12432982	3300015054	Vadose Zone Soil	VLQLLTFQRILPGMSRKPQPPQPTKTRWHVYKLAAKRQWVGEIEAVEERDAIKIAAKEFKQPAKKLMAVPRR*
Ga0137418_100719747	3300015241	Vadose Zone Soil	LPARGLVAATYLAANTGGPRKPQQPSQRTKWHVYLQARAARREWVGEIEAADEREAIEKAAKELKQPAKKLMAVQRR*
Ga0137418_101394702	3300015241	Vadose Zone Soil	MSRKPQPPQPTKTRWHVYKLAAKRQWVGEIEAVEERDAIKIAAKEFKQPAKKLMAVPRR*
Ga0137412_102491222	3300015242	Vadose Zone Soil	MSRKPQQPPQPTKTRWHVYRLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVPRR
Ga0137409_1001105619	3300015245	Vadose Zone Soil	MSRKPQPPQPTKTRWHVYKLAAKRQWVGEIEAVEEREAIKIAAKEFKQSAKKLMAVPRR*
Ga0137409_100219019	3300015245	Vadose Zone Soil	MPRKPQQPPQPTKTKWHVYKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLIAVQRR
Ga0182037_119283611	3300016404	Soil	MRRKPQQPQQRTKWHVYLQARTAKLEWVGEIEAVDEREAIEKAAKEFRLDPAKLMAEQR
Ga0187783_101910053	3300017970	Tropical Peatland	SCLPSRGTCGDRTGIEPTYLAANTGGMPRKPQQPPQPTKTRWHVYKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKTLMAVQRR
Ga0187783_102848573	3300017970	Tropical Peatland	MSRKPQQPPKRTKWHVYYKFAARREWVGEIEAADEREAIQIAAKEFKQPANKLVAVQRR
Ga0066662_107919601	3300018468	Grasslands Soil	MSRKPQPPQPTKTKWHVYKLAAKREWVGEIEAVDEREVIEIAAKEFKQPAKKLMAMQRR
Ga0066662_116372832	3300018468	Grasslands Soil	MSRKPRPPPQPTRTKWHVYKLAAKREWVGEIEAVDERDAIEIAAKEFRLPARKLMAVPRR
Ga0179592_100371062	3300020199	Vadose Zone Soil	MPRKPRQPPQRTKWHVYYKLAAKLEWVGEIEAVDEHKAIEIAAKEFKEPAKKLISVQRR
Ga0179596_100049785	3300021086	Vadose Zone Soil	LPARGLVAATYLAANTGGIPRKPQQPSQRTKWHVYLQARAARREWVAEIEAVDEREAIEIAAKELKQPAKKLMAVQRR
Ga0179596_102123111	3300021086	Vadose Zone Soil	LPARGLVAATYLAANTGGMPRKPQQPSQRAKWHVYLQARAARREWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVPRR
Ga0179596_106478751	3300021086	Vadose Zone Soil	MSRKPQPPQPTKTKWHVYKLAAKRQWVGEIEVVDERQAIEIAAKEFKQP
Ga0209240_10205766	3300026304	Grasslands Soil	MPRKPQQLSQRTKWHVYLQARAARREWVGEIEAVDEREAIVIAAKEFKQPAKKLIAMQRR
Ga0257162_10223933	3300026340	Soil	RAGRNQPDGLPARGLVAATYLAANTGGMPRKPQQPSQRTKWHVYLQARAARRKWVAEIEAVDEREAIEIAAKELKQPAKKLMAVQRR
Ga0257149_10589162	3300026355	Soil	MPRKPQQPSQQTKWHVYLQARAARREWVGEIEAVDERQAIEIAAKEFKQPAKKLIATQRR
Ga0257150_10040247	3300026356	Soil	MSRKPQPPQPTKTKWHVYKLAAKRQWVGEIEAVDELEAIEIAAKEFKQPAKKLMAVQRR
Ga0257166_10109652	3300026358	Soil	LPARGLVAATYLAANTGGIPRKPQQPSQRTKWHVYLQARAARREWVAEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR
Ga0257176_10327491	3300026361	Soil	MPRKPQRPSQQTKWHVYLQARAARREWVGEIEAVDERQAIEIAAKEFKQPAKKLIATQRR
Ga0257178_10479981	3300026446	Soil	ARGLVAATYLAANTGGIPRKPQQPSQRTKWHVYLQARAARREWVAEIEAVDEREAIEIAAKELKQPAKKLMAVQRR
Ga0257155_10222602	3300026481	Soil	LPARGLVAATYLAANTGGMPRKPQQPSQQTKWHVYLQARAARREWVGEIEAVDERQAIEIAAKEFKQPAKKLIATQRR
Ga0257155_10615411	3300026481	Soil	MSRKPQPPQPTKTRWHVYLHARAAGREWVGEIEAINEREAIQIAAKEFKQPANKLIAVQR
Ga0257172_10010628	3300026482	Soil	VLNVLTLRPILSAMSRKPQPPQPTKTKWHVYKLAAKRQWVGEIEAVDELEAIEIAAKEFKQPAKKLMAVQRR
Ga0257172_10834622	3300026482	Soil	AANTGGMPRKPQQPSQRTKWHVYLQARAARRKWVAEIEAVDEREAIEIAAKELKQPAKKLMAVQRR
Ga0257160_10196611	3300026489	Soil	MPRKPQQPSQQTKWHVYLQARAARREWVGEIEAVDERQAIEIAAKEFKQPAKKLITTQRR
Ga0257159_10631572	3300026494	Soil	QPDGLPARGLVAATYLAANTGGMPRKPQQPSQRTKWHVYLQARAARREWVAEIEAVDEREAIEIAAKEFKQPAKKLMAVPRR
Ga0257157_10666063	3300026496	Soil	RNPQPPQPTKTRWHVYLHARAAGREWVGEIEAINEREAIQIAAKEFKQPANKLIAVARR
Ga0257156_10918732	3300026498	Soil	MSRKPQQPSQPTKTRWHVYKLAARRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR
Ga0257165_10872901	3300026507	Soil	MSRKPQQPSQPTKTRWHVYRLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVPRR
Ga0257168_10537842	3300026514	Soil	LPARGLVAATYLAANTGGMPRKPQQPSQRTKWHVYLQARAARRKWVAEIEAVDEREAIEIAAKELKQPAKKLMAVQRR
Ga0209648_1000723412	3300026551	Grasslands Soil	MPRKPQQPSQRTKWHVYLQARAARREWVGEIEAVDEREAIVIAAKEFKQPAKKLIATQRR
Ga0209648_101101714	3300026551	Grasslands Soil	MSRKPQPPQPTKTKWHVYKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRQ
Ga0209179_10466882	3300027512	Vadose Zone Soil	MSRKPQQPSQPTKTRWHVYKLAARRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVPRR
Ga0209179_11182091	3300027512	Vadose Zone Soil	TLRPILPGMSRKPQQPPQPTKTRWHVYRLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLMAVQRR
Ga0209588_11725032	3300027671	Vadose Zone Soil	MPRKPQQPPQPTETKWHVYKLAAKRQWVGEIEAVDEREAIEIAAKEFKQPAKKLIAVQRR
Ga0209488_100807103	3300027903	Vadose Zone Soil	MSRKPQQPPQRTKWHVYKLAAKREWVGEIEAVDEREAIEIAAKEFKQPVKKLMVVPR
Ga0307471_1009303543	3300032180	Hardwood Forest Soil	MSRKPQPPQPTKTKWHVFLQDRATKQWVGEIKAVDEREAIEIAAKEFKQPAKKLMAVPRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences