Metagenome Family F095003

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095003
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	59 residues
Representative Sequence	MDYGIGMFLAGLVSGAGIGWYSGILRERIRQTDPKKSKRESNFYRHLLYKAGLSEDGDKGE
Number of Associated Samples	53
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.04 %
% of genes near scaffold ends (potentially truncated)	20.95 %
% of genes from short scaffolds (< 2000 bps)	81.90 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.095 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment (30.476 % of family members)
Environment Ontology (ENVO)	Unclassified (55.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (34.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.19% β-sheet: 0.00% Coil/Unstructured: 52.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02599	CsrA	6.67
PF16677	GP3_package	3.81
PF12833	HTH_18	3.81
PF00929	RNase_T	1.90
PF12625	Arabinose_bd	1.90
PF12161	HsdM_N	1.90
PF13683	rve_3	1.90
PF13481	AAA_25	0.95
PF12228	DUF3604	0.95
PF01420	Methylase_S	0.95
PF13489	Methyltransf_23	0.95
PF14340	DUF4395	0.95
PF05717	TnpB_IS66	0.95
PF16472	DUF5050	0.95
PF09509	Hypoth_Ymh	0.95
PF12263	DUF3611	0.95
PF03150	CCP_MauG	0.95
PF02954	HTH_8	0.95
PF12706	Lactamase_B_2	0.95
PF13229	Beta_helix	0.95
PF00990	GGDEF	0.95
PF00565	SNase	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	6.67
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.95
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
All Organisms	root	All Organisms	41.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
cellular organisms	root	All Organisms → cellular organisms	41.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %
Fusobacteria	phylum	All Organisms → cellular organisms → Bacteria → Fusobacteria	0.95 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	15.24 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.95 %
Fusobacteriia	class	All Organisms → cellular organisms → Bacteria → Fusobacteria → Fusobacteriia	0.95 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.81 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.90 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	1.90 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.95 %
Fusobacteriales	order	All Organisms → cellular organisms → Bacteria → Fusobacteria → Fusobacteriia → Fusobacteriales	0.95 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.95 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.95 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.95 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
unclassified Thiotrichales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales	1.90 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.95 %
Fusobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Fusobacteria → Fusobacteriia → Fusobacteriales → Fusobacteriaceae	0.95 %
Chromatiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiales incertae sedis	0.95 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.95 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.95 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.95 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	0.95 %
sulfur-oxidizing symbionts	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts	0.95 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
Thiotrichales bacterium SG8_50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	1.90 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.95 %
endosymbiont of Lamellibrachia luymesi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → endosymbiont of Lamellibrachia luymesi	0.95 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.95 %
Thiohalobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiales incertae sedis → Thiohalobacter	0.95 %
Oceanospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum	0.95 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	0.95 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	0.95 %
Thiorhodovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodovibrio	0.95 %
Fusobacterium	genus	All Organisms → cellular organisms → Bacteria → Fusobacteria → Fusobacteriia → Fusobacteriales → Fusobacteriaceae → Fusobacterium	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
Thiotrichales bacterium SG8_50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	1.90 %
unclassified Fusobacterium	no rank	All Organisms → cellular organisms → Bacteria → Fusobacteria → Fusobacteriia → Fusobacteriales → Fusobacteriaceae → Fusobacterium → unclassified Fusobacterium	0.95 %
unclassified Ruegeria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria	0.95 %
Candidatus Magnetobacterium bavaricum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum	0.95 %
Desulfospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfospira	0.95 %
Oceanospirillum multiglobuliferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum → Oceanospirillum multiglobuliferum	0.95 %
Thiorhodovibrio winogradskyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodovibrio → Thiorhodovibrio winogradskyi	0.95 %
endosymbiont of Lamellibrachia luymesi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → endosymbiont of Lamellibrachia luymesi	0.95 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.95 %
Thiohalobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiales incertae sedis → Thiohalobacter	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.10 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
Thiotrichales bacterium SG8_50	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	1.90 %
Ruegeria sp. Alg231-54	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. Alg231-54	0.95 %
Fusobacterium sp. CM1	species	All Organisms → cellular organisms → Bacteria → Fusobacteria → Fusobacteriia → Fusobacteriales → Fusobacteriaceae → Fusobacterium → unclassified Fusobacterium → Fusobacterium sp. CM1	0.95 %
Desulfospira joergensenii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfospira → Desulfospira joergensenii	0.95 %
Candidatus Magnetobacterium bavaricum	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum	0.95 %
Oceanospirillum multiglobuliferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum → Oceanospirillum multiglobuliferum	0.95 %
Thiorhodovibrio winogradskyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodovibrio → Thiorhodovibrio winogradskyi	0.95 %
endosymbiont of Lamellibrachia luymesi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → endosymbiont of Lamellibrachia luymesi	0.95 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.95 %
Thiohalobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiales incertae sedis → Thiohalobacter	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003847\|Ga0055582_1016660	Not Available	1342	Open in IMG/M
3300004097\|Ga0055584_101350267	Not Available	741	Open in IMG/M
3300004097\|Ga0055584_102306057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. Alg231-54	547	Open in IMG/M
3300004113\|Ga0065183_10219366	Not Available	822	Open in IMG/M
3300004113\|Ga0065183_10387224	Not Available	665	Open in IMG/M
3300004113\|Ga0065183_10650562	Not Available	546	Open in IMG/M
3300005588\|Ga0070728_10455448	All Organisms → cellular organisms → Bacteria → Fusobacteria → Fusobacteriia → Fusobacteriales → Fusobacteriaceae → Fusobacterium → unclassified Fusobacterium → Fusobacterium sp. CM1	673	Open in IMG/M
3300005590\|Ga0070727_10014598	All Organisms → cellular organisms → Bacteria → Proteobacteria	5447	Open in IMG/M
3300005590\|Ga0070727_10091364	Not Available	1759	Open in IMG/M
3300005590\|Ga0070727_10131796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1421	Open in IMG/M
3300005590\|Ga0070727_10180982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1185	Open in IMG/M
3300005590\|Ga0070727_10358255	Not Available	812	Open in IMG/M
3300005590\|Ga0070727_10865050	Not Available	508	Open in IMG/M
3300005600\|Ga0070726_10586238	Not Available	563	Open in IMG/M
3300005601\|Ga0070722_10214958	Not Available	797	Open in IMG/M
3300005609\|Ga0070724_10205504	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005612\|Ga0070723_10214425	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300005612\|Ga0070723_10512515	Not Available	593	Open in IMG/M
3300005920\|Ga0070725_10290800	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300007102\|Ga0102541_1282247	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300007784\|Ga0102955_1063555	Not Available	912	Open in IMG/M
3300007900\|Ga0111031_1135027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4645	Open in IMG/M
3300010392\|Ga0118731_100692765	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300010392\|Ga0118731_103463309	Not Available	501	Open in IMG/M
3300010392\|Ga0118731_103872560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300010392\|Ga0118731_104592624	Not Available	1029	Open in IMG/M
3300010392\|Ga0118731_106015200	All Organisms → cellular organisms → Bacteria	3851	Open in IMG/M
3300010392\|Ga0118731_108482693	Not Available	599	Open in IMG/M
3300010392\|Ga0118731_110969401	Not Available	835	Open in IMG/M
3300010392\|Ga0118731_112257282	Not Available	728	Open in IMG/M
3300010392\|Ga0118731_113065588	Not Available	1231	Open in IMG/M
3300010392\|Ga0118731_113474622	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300010392\|Ga0118731_114675209	Not Available	512	Open in IMG/M
3300010392\|Ga0118731_114837238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiorhodovibrio → Thiorhodovibrio winogradskyi	2201	Open in IMG/M
3300010392\|Ga0118731_114980277	Not Available	776	Open in IMG/M
3300010430\|Ga0118733_100182864	All Organisms → cellular organisms → Bacteria	4166	Open in IMG/M
3300010430\|Ga0118733_100249477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiales incertae sedis → Thiohalobacter	3509	Open in IMG/M
3300010430\|Ga0118733_101110585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1579	Open in IMG/M
3300010430\|Ga0118733_101247414	Not Available	1484	Open in IMG/M
3300010430\|Ga0118733_106641585	Not Available	603	Open in IMG/M
3300010430\|Ga0118733_106838038	Not Available	594	Open in IMG/M
3300010430\|Ga0118733_107302726	Not Available	574	Open in IMG/M
3300010430\|Ga0118733_107337866	Not Available	572	Open in IMG/M
3300010430\|Ga0118733_108098864	Not Available	544	Open in IMG/M
3300010430\|Ga0118733_109063025	Not Available	513	Open in IMG/M
3300011118\|Ga0114922_10083324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	2751	Open in IMG/M
3300011118\|Ga0114922_10681564	Not Available	843	Open in IMG/M
3300019696\|Ga0194017_1018846	Not Available	719	Open in IMG/M
3300019696\|Ga0194017_1021268	Not Available	689	Open in IMG/M
3300019698\|Ga0193986_1022295	Not Available	581	Open in IMG/M
3300019700\|Ga0194006_1032317	Not Available	605	Open in IMG/M
3300019705\|Ga0193981_1013519	Not Available	847	Open in IMG/M
3300019706\|Ga0193995_1003706	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300019711\|Ga0193993_1025139	Not Available	686	Open in IMG/M
3300019719\|Ga0193977_1000760	All Organisms → cellular organisms → Bacteria	2396	Open in IMG/M
3300019722\|Ga0193971_1048831	Not Available	561	Open in IMG/M
3300019724\|Ga0194003_1033346	Not Available	622	Open in IMG/M
3300019726\|Ga0193974_1011839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	911	Open in IMG/M
3300019729\|Ga0193968_1056256	Not Available	550	Open in IMG/M
3300019731\|Ga0193982_1025739	Not Available	714	Open in IMG/M
3300019734\|Ga0193970_1028486	Not Available	696	Open in IMG/M
3300019743\|Ga0193992_1028639	Not Available	727	Open in IMG/M
3300019743\|Ga0193992_1063636	Not Available	545	Open in IMG/M
3300019744\|Ga0193998_1008243	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300019746\|Ga0194008_1021799	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300019753\|Ga0194010_1000377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3565	Open in IMG/M
3300019934\|Ga0194005_104916	Not Available	578	Open in IMG/M
3300025883\|Ga0209456_10129230	Not Available	1104	Open in IMG/M
3300025883\|Ga0209456_10346287	Not Available	608	Open in IMG/M
3300025895\|Ga0209567_10164317	Not Available	1040	Open in IMG/M
3300027758\|Ga0209379_10305125	Not Available	533	Open in IMG/M
3300027790\|Ga0209273_10010473	All Organisms → cellular organisms → Bacteria → Proteobacteria	4970	Open in IMG/M
3300027790\|Ga0209273_10184925	Not Available	881	Open in IMG/M
3300027820\|Ga0209578_10100480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1431	Open in IMG/M
3300027820\|Ga0209578_10160615	Not Available	1086	Open in IMG/M
3300027820\|Ga0209578_10293311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → sulfur-oxidizing symbionts → endosymbiont of Lamellibrachia luymesi	757	Open in IMG/M
3300027845\|Ga0209271_10246110	Not Available	721	Open in IMG/M
3300027967\|Ga0209272_10328106	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300028599\|Ga0265309_10543509	Not Available	777	Open in IMG/M
3300028600\|Ga0265303_10393886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1099	Open in IMG/M
3300028600\|Ga0265303_10543676	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfospira → Desulfospira joergensenii	937	Open in IMG/M
3300028600\|Ga0265303_11775262	Not Available	516	Open in IMG/M
3300031727\|Ga0316576_10157880	Not Available	1710	Open in IMG/M
3300032231\|Ga0316187_10010036	All Organisms → cellular organisms → Bacteria → Proteobacteria	8050	Open in IMG/M
3300032231\|Ga0316187_10027932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4622	Open in IMG/M
3300032231\|Ga0316187_10058618	All Organisms → cellular organisms → Bacteria → Proteobacteria	3060	Open in IMG/M
3300032231\|Ga0316187_10204964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → unclassified Thiotrichales → Thiotrichales bacterium SG8_50	1522	Open in IMG/M
3300032231\|Ga0316187_10401308	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300032231\|Ga0316187_10428405	Not Available	997	Open in IMG/M
3300032251\|Ga0316198_10005666	Not Available	7736	Open in IMG/M
3300032251\|Ga0316198_10345732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	835	Open in IMG/M
3300032258\|Ga0316191_10062610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2741	Open in IMG/M
3300032258\|Ga0316191_10268070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum → Oceanospirillum multiglobuliferum	1244	Open in IMG/M
3300032259\|Ga0316190_10351280	Not Available	1005	Open in IMG/M
3300032260\|Ga0316192_10112047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1911	Open in IMG/M
3300032260\|Ga0316192_10155323	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300032260\|Ga0316192_10334508	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium bavaricum	1039	Open in IMG/M
3300032260\|Ga0316192_11199296	Not Available	506	Open in IMG/M
3300032262\|Ga0316194_10189598	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300032272\|Ga0316189_11119820	Not Available	595	Open in IMG/M
3300032273\|Ga0316197_10050978	All Organisms → cellular organisms → Bacteria → Proteobacteria	2698	Open in IMG/M
3300033429\|Ga0316193_10020540	Not Available	5091	Open in IMG/M
3300033429\|Ga0316193_10353360	Not Available	1167	Open in IMG/M
3300033429\|Ga0316193_10733969	Not Available	786	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.10%
Host-Associated	Host-Associated	0.95%
Engineered	Engineered	0.95%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.14%
Terrestrial	Environmental → Terrestrial	0.95%
Plants	Host-Associated → Plants	0.95%
Lab Enrichment	Engineered → Lab Enrichment	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	78.10%
Freshwater	Environmental → Aquatic → Freshwater	19.05%
Soil	Environmental → Terrestrial → Soil	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.95%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	62.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	19.05%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	8.57%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	4.76%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.95%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	62.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	19.05%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	8.57%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	4.76%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	30.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	19.05%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	13.33%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	12.38%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	8.57%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	6.67%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	4.76%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Marine Sediment	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Marine Sediment	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003847	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004113	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)	Environmental	Open in IMG/M
3300005588	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1	Environmental	Open in IMG/M
3300005590	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2	Environmental	Open in IMG/M
3300005600	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1	Environmental	Open in IMG/M
3300005601	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1	Environmental	Open in IMG/M
3300005609	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1	Environmental	Open in IMG/M
3300005612	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2	Environmental	Open in IMG/M
3300005920	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2	Environmental	Open in IMG/M
3300007102	Combined Assembly of Marine Sediment Inoculum and Enrichments	Engineered	Open in IMG/M
3300007784	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D1_MG	Environmental	Open in IMG/M
3300007900	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 25 cmbsf. Combined Assembly of MM1PM1	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300019696	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_3-4_MG	Environmental	Open in IMG/M
3300019698	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRC_2-3_MG	Environmental	Open in IMG/M
3300019700	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_2-3_MG	Environmental	Open in IMG/M
3300019705	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_2-3_MG	Environmental	Open in IMG/M
3300019706	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_1-2_MG	Environmental	Open in IMG/M
3300019711	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_4-5_MG	Environmental	Open in IMG/M
3300019719	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_4-5_MG	Environmental	Open in IMG/M
3300019722	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_7-8_MG	Environmental	Open in IMG/M
3300019724	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_9-10_MG	Environmental	Open in IMG/M
3300019726	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_10-11_MG	Environmental	Open in IMG/M
3300019729	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_4-5_MG	Environmental	Open in IMG/M
3300019731	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_3-4_MG	Environmental	Open in IMG/M
3300019734	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_6-7_MG	Environmental	Open in IMG/M
3300019743	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_3-4_MG	Environmental	Open in IMG/M
3300019744	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_4-5_MG	Environmental	Open in IMG/M
3300019746	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_4-5_MG	Environmental	Open in IMG/M
3300019753	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_6-7_MG	Environmental	Open in IMG/M
3300019934	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_1-2_MG	Environmental	Open in IMG/M
3300025883	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)	Environmental	Open in IMG/M
3300025895	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)	Environmental	Open in IMG/M
3300027758	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1 (SPAdes)	Environmental	Open in IMG/M
3300027790	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes)	Environmental	Open in IMG/M
3300027820	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)	Environmental	Open in IMG/M
3300027845	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)	Environmental	Open in IMG/M
3300027967	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2 (SPAdes)	Environmental	Open in IMG/M
3300028599	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)	Environmental	Open in IMG/M
3300028600	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)	Environmental	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300032231	Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1	Environmental	Open in IMG/M
3300032251	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic	Environmental	Open in IMG/M
3300032258	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm	Environmental	Open in IMG/M
3300032259	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2	Environmental	Open in IMG/M
3300032260	Coastal sediment microbial communities from Maine, United States - Merrow Island worm burrow	Environmental	Open in IMG/M
3300032262	Coastal sediment microbial communities from Maine, United States - Cross River sediment 1	Environmental	Open in IMG/M
3300032272	Coastal sediment microbial communities from Maine, United States - Lowes Cove worm burrow	Environmental	Open in IMG/M
3300032273	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A oxic	Environmental	Open in IMG/M
3300033429	Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055582_10166602	3300003847	Pelagic Marine	MMDCGIGMFLAGLLSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLPEEKDKAGYPEHDPAPAGVF*
Ga0055584_1013502671	3300004097	Pelagic Marine	MMDCGIGMFLAGLLSGAGIGWYSGILRERIRQTDPEKSKREPIIYRHLLEKAGLSEEKDKAG*
Ga0055584_1023060571	3300004097	Pelagic Marine	MDSGIGLFPAGLISGAVIGWYSGILRERIRQTDPKKSKRESNFYRQLLEKAGLSVDGDKAE*
Ga0065183_102193661	3300004113	Pelagic Marine	MDCGIGMFLAGLLSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLPEEKDKAGYPEHDPAPAGVF*
Ga0065183_103872241	3300004113	Pelagic Marine	MDHGIIMFLAGLVSGAGLGWYSGKLRERIRQTDPKRSKQESKFYRHLLDKDGISEDGDPGDTRD*
Ga0065183_106505621	3300004113	Pelagic Marine	MDYGIGMFLAGLVSGVGIGWYSGILRERIRQTDPKKSKRQSMLYRHLLEKAGLSEEKDKSG*
Ga0070728_104554481	3300005588	Marine Sediment	VNNGLRNRDVPGGTGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLSEEKDKAG*
Ga0070727_100145983	3300005590	Marine Sediment	MDYGIGMLLAGLVSGAGIGWYAGILRERIRQTDPKRSKRESNFYRHLLGKAGLPVDGDKGE*
Ga0070727_100913642	3300005590	Marine Sediment	MNCGIGMFLAGLLSGAGIGWYSGILHMRIRQTDPKKNKRESILYRHLLEKAGLSEDGDRGR*
Ga0070727_101317962	3300005590	Marine Sediment	MDYGIGMFLEGLISGAGIGWYSGILRERIRQTDPRKSKREAILYRHLLDKAGLSVDGDKGE*
Ga0070727_101809823	3300005590	Marine Sediment	MDYGIGMFLAGQVSGAGIGWYSGILRERIRQTDPKKSKRQSMLYRHLLEKAGLSEEKDKPG*
Ga0070727_103582551	3300005590	Marine Sediment	MDYGIGMSLAGLVSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLSEEKDKAG*
Ga0070727_108650501	3300005590	Marine Sediment	LAGLVSGAGIGWYSSILHMRIRQIDPRKSERESMLYRHLLEKAGLSEEKDKAG*
Ga0070726_105862382	3300005600	Marine Sediment	MFLAGLVSGAGIGWYSGILHLRIKQTDPKKSKRESMLYRHLLEKAGLSEEKDKAG*
Ga0070722_102149582	3300005601	Marine Sediment	MDYGIGMFLEGLISGAGIGWYSGILRERIRQTDPKKSKRQSMLYRHLLEKAGLSEEKDKS
Ga0070724_102055041	3300005609	Marine Sediment	MDYGIGMLLAGLVSGAGIGWYAGILRERIRQTDPKRSKRESNFYRHLLGK
Ga0070723_102144251	3300005612	Marine Sediment	MDYGIGMFLAGLLSGAGTGWYSGILHMRIKQTDPKRSKRESNFYRHLLSKAGLSVDGDQGK*
Ga0070723_105125151	3300005612	Marine Sediment	MDYGIGMFLAGLALGYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLSEEKDKAG*
Ga0070725_102908001	3300005920	Marine Sediment	IGMFLAGLLSGAGLGWYSGILRERIRQTDPKRSKRESNFYRHLLGKAGLPVDGDKGE*
Ga0102541_12822472	3300007102	Marine Sediment	MDYGIGMFLAGLVSGAGIGWYSGILHQRIRQTDPKKSKRESNFYRHLMGKAGLPVDGDKGE*
Ga0102955_10635551	3300007784	Soil	MDCGIGMFLAGLVSGAGIGWYAGILRERIRQTDPKKSKRESNFYRHLMGKAGLPVDGDKGE*
Ga0111031_11350272	3300007900	Marine Sediment	MDYGIGTFLAGLISGAGIGWYSGKLRMRIRQTAPKKSKCESMLYRHLLGKGG*
Ga0118731_1006927651	3300010392	Marine	MMDYGIGMFLAGLLSGAGIGWYSGILHMRIKHTDPKKSKRESMLYRHLLEKAGLSEEKDKAG*
Ga0118731_1034633092	3300010392	Marine	MMDYGIGMFLAGLVSGAGIGWYSGILQMRIRQTDPKRSKRESAFYRHLLEKAGLSEEKDKAG*
Ga0118731_1038725601	3300010392	Marine	MDYGIGMFLAGLISGAGLGWYSGILHQRIQQTDPKKSKWESKFYRHLLDKAGLSVDGDKNK*
Ga0118731_1045926241	3300010392	Marine	MDYGIGMSLAGLVSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLSEEK
Ga0118731_1060152002	3300010392	Marine	MMDYGIGMFLAGLVSGAGIGWYSSILHMRIRQIDPRKSERESMLYRHLLEKAGLSEEKDKAG*
Ga0118731_1084826933	3300010392	Marine	LAGLVSGAGLGWYSGILHVRIKQTDPKKSKRESNFYRHLLDKAGLSVDEDKAE*
Ga0118731_1109694012	3300010392	Marine	MDYGIGMFLAGLVSGAGIGWYSGILHQRIQQTDPRKSKRESNFYRHLLDKAGLSEEKDKSG*
Ga0118731_1122572821	3300010392	Marine	MDYGIGMFLAGLISGAGIGWYSGILHMRIRQTDPKKSKRESMLYRHLLEKAGLSEKKDKSG*
Ga0118731_1130655881	3300010392	Marine	MDYGIGMFLAGLVSGAGIGWYSGILHMRIRQTDPKRSKRVSNFYRHLLDKAGLPVAGNKDG*
Ga0118731_1134746222	3300010392	Marine	MMDYGIGMFLAGLLSGAGTGWYSGILHMRIKQTDPKRSKRESNFYRHLLSKAGLSVDGDQGK*
Ga0118731_1146752091	3300010392	Marine	MMDYGIGMFLAGLVSGASIAWYSGILQMRIKHTDPKKSKRESMLYRHLLEKA
Ga0118731_1148372383	3300010392	Marine	MMDNGIGMFLAGLLSGAGIGWYRGILHMRIKQTDPKESHRESAFYRHLLSKAGLSEDDPPEK*
Ga0118731_1149802772	3300010392	Marine	MDYGIGMFLAGLVSGAGIGWYSGILRERIRQTDPKKSKRESNFYRHLLYKAGLSEDGDKGE*
Ga0118733_1001828642	3300010430	Marine Sediment	MDYGIGMFLAGQVSGAGIGWYSGILRERIRQTDPKKSKRQSMLYRHLLEKAGLSEEKDKSG*
Ga0118733_1002494772	3300010430	Marine Sediment	MMNCGIGMFLAGLLSGAGIGWYSGILHMRIRQTDPKKNKRESILYRHLLEKAGLSEDGDRGR*
Ga0118733_1011105851	3300010430	Marine Sediment	MMDYGIGMFLAGLVSGAGIGWYSGILHTRIQQTDPKRSKRESMLYRHLLEKAGLSEDGDKAE*
Ga0118733_1012474142	3300010430	Marine Sediment	MDYGIGMSLAGLVSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLSEE
Ga0118733_1066415852	3300010430	Marine Sediment	MDYGIGMFLAGLVSGSGIGWYSGILRERIKQTDPKRNKRESMLYRHLLEKAGLSEEKDKSG*
Ga0118733_1068380381	3300010430	Marine Sediment	GIGMFLAGLISGAGIGWYSGILHMRIRQTDPKKSKRESMLYRHLLEKAGLSEKKDKSG*
Ga0118733_1073027261	3300010430	Marine Sediment	MDYGIGMFLAGLVSGAGIGWYAGILRARIRQTDPEKSKRESNFYRHLLGKAGLSEDGEKPE*
Ga0118733_1073378662	3300010430	Marine Sediment	MDHGIIMFLAGLVSGAGIGWYAGILRERIRQTDPEKSQRESAFYRHLLDKSGLAK
Ga0118733_1080988642	3300010430	Marine Sediment	FLAGLVSGAGIGWYSGILHMRIKHTDPKKSKRESILYRHLLEKAGLSEEKDKSG*
Ga0118733_1090630251	3300010430	Marine Sediment	MMDYGIGMFLAGLISGAGIGWYSGILHQRIQQTDPKKSKWESKFYRHLLDKAGLSVDGDKNK*
Ga0114922_100833241	3300011118	Deep Subsurface	MDYGIGTFLAGLISGAGIGWYSGKLHMRIRQTAPKKSKCESMLYRHLLGKGG*
Ga0114922_106815642	3300011118	Deep Subsurface	MMDYGIGMFLPGLVSGAGIGWYSGILHMRIKQTDPEKSKRESNFYRHLLYKSGLSADEPPEK*
Ga0194017_10188462	3300019696	Sediment	MGNGIGWFLAGLLSGAGIGWYAGILRERIRQTDPKKSKRESNFYRHLMGKAGLPVDGDKG
Ga0194017_10212681	3300019696	Sediment	MDYGIGMFLAGLLSGAGIGWYSGILRERIRQTDPKKSKRESNFYRQLLEKAGLSVDGDKA
Ga0193986_10222951	3300019698	Sediment	MDSGIGLFPAGLISGAVIGWYSGILRERIRQTDPKKSKRESNFYRQLLEKAGLSVDGDKA
Ga0194006_10323172	3300019700	Sediment	LFPAGLISGAVIGWYSGILRERIRQTDPKKSKREAIIYRHLLEKAGLSEEKDKAG
Ga0193981_10135191	3300019705	Sediment	MFLAGLLSGAGIGWYSGILRERIRQTDPKKSKREAIIYRHLLEKAGLSEEKDKAG
Ga0193995_10037062	3300019706	Sediment	MDSGIGLFPAGLISGAVIGWYSGILRERIRQTDPKKSKRESNFYRQLLEKAGFAVDGDKA
Ga0193993_10251392	3300019711	Sediment	MMDHGTIMFLAGLLSGAGIGWYSGILRERIRQTDPRKSKRESMLYRYLLEKAGLSVDGDRGR
Ga0193977_10007602	3300019719	Sediment	MDSGIGLFPAGLISGAVIGWYSGILRERIRQTDPKKSKRESNFYRQLLEKAGLYVDGDKA
Ga0193971_10488311	3300019722	Sediment	MDHGIIMFLAGLLSGAGLGWYAGILRERIKQTDPKRSKWESNFYRHLLDKAGLSVNGDPGDTRD
Ga0194003_10333461	3300019724	Sediment	MDSGIGLFPAGLISGAVIGWYSGILRERIRQTDPKKSKRESNFYRQLLEKAGLSVDGHKA
Ga0193974_10118391	3300019726	Sediment	LFLAGLLSGAGIGWYSGILRERIRQTDPKKSKREAIIYRHLLEKAGLSEEKDKAG
Ga0193968_10562562	3300019729	Sediment	FLAGLLSGAGIGWYSGILRERIRQTDPEKSKREPIIYRHLLEKAGLSEEKDKAG
Ga0193982_10257391	3300019731	Sediment	IFAEHNGIILFLAGLLSGAGIGWYSGILRERIRQTDPEKSKREPIIYRHLLEKAGLSEEKDKAA
Ga0193970_10284861	3300019734	Sediment	MDYGIGMFLAGLLSGAAIGWYSGILRERIRQTDPKKSKRESMFYRQLLYKAGLSEDGGKG
Ga0193992_10286391	3300019743	Sediment	MDRGIILFLAGLLSCAGIGWYSGILHQRIQQTDPKKSKRESKFYRHLLEKAGLSEEKDKA
Ga0193992_10636361	3300019743	Sediment	MDYGIGMFLAGLLSGAAIGWYSGILHMRIKQTDPKRSKRESMLYRHLLEKAGLSEDGDRG
Ga0193998_10082432	3300019744	Sediment	MDSGIGLFPAGLISGAVIGWYSGILRERIRQTDPKKSKRESNFYRQLLEK
Ga0194008_10217992	3300019746	Sediment	LFLAGLLSGAGIGWYSGILRERIRQTDPEKSKREPIIYRHLLEKAGLSEEKDKA
Ga0194010_10003776	3300019753	Sediment	MDYGIGMFLAGMISGAGVGWYGGLLRERIRQTDPKRSKRESILY
Ga0194005_1049162	3300019934	Sediment	MDSGIGLFPAGLISGAVIGWYSGILRERIRQTDPEKSKREPIIYRHLLEKAGLSEEKDKA
Ga0209456_101292302	3300025883	Pelagic Marine	MMDCGIGMFLAGLLSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLPEEKDKAGYPEHDPAPAGVF
Ga0209456_103462871	3300025883	Pelagic Marine	MDYGIGMFLAGLVSGSGIGWYSGILRERIRQADPKRSKRESMLYRHLLGKAGLSEDGDKA
Ga0209567_101643172	3300025895	Pelagic Marine	MDYGIGMFLAGLVSGSGIGWYSGILRERIRQTDPKRSKRESMLYRHLLGKAGLSEDGDKA
Ga0209379_103051251	3300027758	Marine Sediment	MDYGIGMSLAGLVSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLEKAGLSEEKDKA
Ga0209273_100104739	3300027790	Marine Sediment	MDYGIGMLLAGLVSGAGIGWYAGILRERIRQTDPKRSKRESNFYRHLLGKAGLPVDGDKG
Ga0209273_101849252	3300027790	Marine Sediment	MNCGIGMFLAGLLSGAGIGWYSGILHMRIRQTDPKKNKRESILYRHLLEKAGLSEDGDRG
Ga0209578_101004802	3300027820	Marine Sediment	MDYGIGMFLEGLISGAGIGWYSGILRERIRQTDPRKSKREAILYRHLLDKAGLSVDGDKG
Ga0209578_101606151	3300027820	Marine Sediment	MDYGIGMSLAGLVSGAGIGWYSGILHMRIKHTDPKKSKRESTLYRHLLE
Ga0209578_102933111	3300027820	Marine Sediment	MDYGIGMFLAGQVSGAGIGWYSGILRERIRQTDPKKSKRQSMLYRHLLEKAGLSEEKDKS
Ga0209271_102461101	3300027845	Marine Sediment	MDYGIGMFLAGLLSGAGTGWYSGILHMRIKQTDPKRSKRESNFYRHLLSKAGLSVDGDQG
Ga0209272_103281061	3300027967	Marine Sediment	IGMLLAGLVSGAGIGWYAGILRERIRQTDPKRSKRESNFYRHLLGKAGLPVDGDKGE
Ga0265309_105435092	3300028599	Sediment	MDHGMIMFLAGLLSGAGIGWYSGILHERIRQTDPNKSKWESKFYRHFLYKAGLSGDGDPGHNRD
Ga0265303_103938863	3300028600	Sediment	MFLAGLVSGAGIGWYSGILHMCIKHTDPKKSKRESTLYRHLLEKAGLSEEKDKAG
Ga0265303_105436762	3300028600	Sediment	MDYGIGMFLAGLVSGAGIGWYSGILHMRIRQTDPEKSKRESIFYRYLFYKAGLSADGDKG
Ga0265303_108876462	3300028600	Sediment	LAGLLSGAGIGWYAGILRERIRQTDPKKSKWESKFYRHLLYKA
Ga0265303_117752621	3300028600	Sediment	MMNCGIGMFLAGLLSGAGIGWYSGILHMRIRQTDPKNNKRESILYRHLLEKAGLSEDGDRGR
Ga0316576_101578802	3300031727	Rhizosphere	MDYGIGMFLAGFVSGAGIGWYSGILHMRIKQTDPKKSKRESMLYRHLLDK
Ga0316187_1001003610	3300032231	Worm Burrow	MDYGIGMFLAGLVSGAGIGWYSGILHQRIQQTDPRKSKRESNFYRPLLGKAGLSIDGDKEDDRA
Ga0316187_100279322	3300032231	Worm Burrow	MDYGIGMFLAGLLSGAGIGWYAGILRERIRQTDPKRSKRESMLYRHLLSKAGLSEDEDKA
Ga0316187_100586183	3300032231	Worm Burrow	MDCGIGMFLAGLVSGAGIGWYAGILRERIRQTDPKKSKRESNFYRHLMGKAGLPVDGDKG
Ga0316187_102049642	3300032231	Worm Burrow	MDYGIGTFLAGLISGAGIGWYSGKLRMRIRQTAPKKSKCESMLYRHLLGKGG
Ga0316187_104013082	3300032231	Worm Burrow	MDYGTGMFLAGIGWYSGILHVRIKQTDPEKSKRESNFYRHLLEKAGLSEKKDKAG
Ga0316187_104284052	3300032231	Worm Burrow	MDYGIGMFLAGLVSGAGIGWYSGILHMRIRQTDPEISKRESNFYRHLLDKAGLSVDGDKG
Ga0316198_100056668	3300032251	Sediment	MDYGIRMFLAGLVSGVGLGWYSGILHQRIKQTDPKKSKRESMLYRHLFYKAGLSEEKDKA
Ga0316198_103457322	3300032251	Sediment	MDYGIGMFLAGLVSGSGIGWYSGILRERIRQTDPKKSKRESNFYRHLLYKVGLSEDGDKG
Ga0316191_100626101	3300032258	Worm Burrow	MFLAGLVSGAGIGWYAGILRERIRQTDPKKSKRESNFYRHLMGKAGLPVDGDKGE
Ga0316191_102680702	3300032258	Worm Burrow	MDYGIGMLLAGLVSGAGIGWYAGILRERIRQTDPKRSKWESNFYRHLMDKAGLSVNGDPGDTRG
Ga0316190_103512802	3300032259	Worm Burrow	MMDYGIGMFLADLVSGAGLGWYSGILHQRIQQTDPKKSKRESTFYRHLLGKDGLSEDEDKAG
Ga0316192_101120471	3300032260	Worm Burrow	MDYGIGMFLAGLVSGAGIGWYSGILHQRIQQTDPRKSKRESNFYRHLLGKADSSEDEDKA
Ga0316192_101553234	3300032260	Worm Burrow	MDYGIGMFLAGLISGAGIGWYSGILHMRIKHTDPKKSKRESMLYRHLLEKTGLSEEKDKG
Ga0316192_103345082	3300032260	Worm Burrow	MMDYGIGMFLAGLLSGAGIGWYAGILRERIRQTDPKRSKRESMLYRHLLSKAGLSEDEDKAG
Ga0316192_111992961	3300032260	Worm Burrow	MDYGIGMFLAGLVSGSGIGWYSGILRERIRQTDPKKSKRESNFYRHLLYKVGLS
Ga0316194_101895981	3300032262	Sediment	MMDYGIGMFLAGLLSGAGIGWYSGILHMRIKHTDPKKSKRESMLYRHLLEKTGLSEEKDKGE
Ga0316189_111198202	3300032272	Worm Burrow	LFLAGLLSGAGIGWYSGILRERIRQTDPEKSKREPIIYRHLLEKAGLSEEKDKAG
Ga0316197_100509783	3300032273	Sediment	MDYGIGTFLAGLISGAGIGWYSGKLHMRIRQTAPKKSKCESMLYRHLLGKGG
Ga0316193_100205402	3300033429	Sediment	MDYGIGMFLADLVSGAGLGWYSGILHQRIQQTDPKKSKRESTFYRHLLGKDGLSEDEDKA
Ga0316193_103533603	3300033429	Sediment	GIGMFLPGLVSGAGIGWYSGILHMRIKQTDPEKSKRESNFYRHLLYKSGLSADEPPEK
Ga0316193_107339692	3300033429	Sediment	MDYGIGMFLAGLISGAGIGWYSGILHMRIKHTDPKKSKRESMLYRHLLEKAGLSEEKDKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences