Metagenome / Metatranscriptome Family F095040

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095040
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	68 residues
Representative Sequence	MYTYICCRCTNCAAQIVLEEQGGSNLFRRPARPRAGREACPYCRTVFVPEAYYVAESETPLLQRA
Number of Associated Samples	74
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.57 %
% of genes near scaffold ends (potentially truncated)	17.14 %
% of genes from short scaffolds (< 2000 bps)	66.67 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (46.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.60% Coil/Unstructured: 91.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF11154	DUF2934	6.67
PF01740	STAS	3.81
PF03992	ABM	3.81
PF07238	PilZ	2.86
PF00248	Aldo_ket_red	2.86
PF12680	SnoaL_2	1.90
PF13400	Tad	1.90
PF01258	zf-dskA_traR	1.90
PF00069	Pkinase	1.90
PF07811	TadE	0.95
PF12732	YtxH	0.95
PF01522	Polysacc_deac_1	0.95
PF13545	HTH_Crp_2	0.95
PF14659	Phage_int_SAM_3	0.95
PF12796	Ank_2	0.95
PF15780	ASH	0.95
PF02371	Transposase_20	0.95
PF14559	TPR_19	0.95
PF00266	Aminotran_5	0.95
PF02954	HTH_8	0.95
PF05990	DUF900	0.95
PF12704	MacB_PCD	0.95
PF00857	Isochorismatase	0.95
PF04397	LytTR	0.95
PF00072	Response_reg	0.95
PF00106	adh_short	0.95
PF05532	CsbD	0.95
PF01774	UreD	0.95
PF01668	SmpB	0.95
PF13426	PAS_9	0.95
PF14417	MEDS	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.62
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	1.90
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.95
COG0829	Urease accessory protein UreH	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.95
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.95
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.95
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.81 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.90 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.86 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.86 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.90 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	1.90 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.90 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
unclassified Dyella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella	1.90 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	1.90 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1.90 %
Dyella sp. S184	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. S184	1.90 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10012171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6792	Open in IMG/M
3300001356\|JGI12269J14319_10059989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. S184	2178	Open in IMG/M
3300001356\|JGI12269J14319_10214398	Not Available	745	Open in IMG/M
3300004602\|Ga0068960_1242582	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005434\|Ga0070709_11586579	Not Available	533	Open in IMG/M
3300005536\|Ga0070697_100805026	Not Available	831	Open in IMG/M
3300005541\|Ga0070733_10004112	All Organisms → cellular organisms → Bacteria	9784	Open in IMG/M
3300005542\|Ga0070732_10241450	Not Available	1081	Open in IMG/M
3300005591\|Ga0070761_10004052	All Organisms → cellular organisms → Bacteria → Acidobacteria	8710	Open in IMG/M
3300005610\|Ga0070763_10031385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2432	Open in IMG/M
3300006893\|Ga0073928_10000917	All Organisms → cellular organisms → Bacteria	61037	Open in IMG/M
3300006893\|Ga0073928_10003483	All Organisms → cellular organisms → Bacteria	24754	Open in IMG/M
3300009029\|Ga0066793_10625740	Not Available	613	Open in IMG/M
3300009038\|Ga0099829_10766590	Not Available	801	Open in IMG/M
3300009616\|Ga0116111_1138828	Not Available	584	Open in IMG/M
3300010048\|Ga0126373_10149119	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300010048\|Ga0126373_10631179	Not Available	1126	Open in IMG/M
3300010343\|Ga0074044_10052638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2790	Open in IMG/M
3300010396\|Ga0134126_10282465	All Organisms → cellular organisms → Bacteria → Proteobacteria	1954	Open in IMG/M
3300011120\|Ga0150983_11171604	Not Available	537	Open in IMG/M
3300011120\|Ga0150983_16330046	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300011271\|Ga0137393_10336301	All Organisms → cellular organisms → Bacteria → PVC group	1289	Open in IMG/M
3300012096\|Ga0137389_11838400	Not Available	501	Open in IMG/M
3300012205\|Ga0137362_10594519	Not Available	954	Open in IMG/M
3300012677\|Ga0153928_1079456	Not Available	629	Open in IMG/M
3300012923\|Ga0137359_10446125	Not Available	1145	Open in IMG/M
3300012923\|Ga0137359_11062165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300012931\|Ga0153915_10769646	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300014501\|Ga0182024_10090822	All Organisms → cellular organisms → Bacteria → Acidobacteria	4495	Open in IMG/M
3300014501\|Ga0182024_10803624	Not Available	1146	Open in IMG/M
3300014501\|Ga0182024_11450344	Not Available	787	Open in IMG/M
3300016387\|Ga0182040_10129659	Not Available	1764	Open in IMG/M
3300017936\|Ga0187821_10013874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2775	Open in IMG/M
3300017955\|Ga0187817_10001979	All Organisms → cellular organisms → Bacteria	10342	Open in IMG/M
3300018007\|Ga0187805_10306759	Not Available	730	Open in IMG/M
3300018013\|Ga0187873_1147707	Not Available	900	Open in IMG/M
3300018017\|Ga0187872_10009184	All Organisms → cellular organisms → Bacteria	6343	Open in IMG/M
3300019786\|Ga0182025_1279577	All Organisms → cellular organisms → Bacteria → Acidobacteria	2022	Open in IMG/M
3300020580\|Ga0210403_11185920	Not Available	589	Open in IMG/M
3300020581\|Ga0210399_10079889	All Organisms → cellular organisms → Bacteria	2656	Open in IMG/M
3300020581\|Ga0210399_10130981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2064	Open in IMG/M
3300020583\|Ga0210401_11176653	Not Available	625	Open in IMG/M
3300021088\|Ga0210404_10094781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300021168\|Ga0210406_10006932	All Organisms → cellular organisms → Bacteria → Acidobacteria	11624	Open in IMG/M
3300021171\|Ga0210405_10005783	All Organisms → cellular organisms → Bacteria	11191	Open in IMG/M
3300021171\|Ga0210405_10060585	All Organisms → cellular organisms → Bacteria → Acidobacteria	2987	Open in IMG/M
3300021178\|Ga0210408_10647398	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300021181\|Ga0210388_10100276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2478	Open in IMG/M
3300021405\|Ga0210387_10059622	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300021405\|Ga0210387_11836808	Not Available	510	Open in IMG/M
3300021432\|Ga0210384_10005700	All Organisms → cellular organisms → Bacteria	13456	Open in IMG/M
3300021432\|Ga0210384_11152206	Not Available	679	Open in IMG/M
3300021560\|Ga0126371_10474445	Not Available	1398	Open in IMG/M
3300021560\|Ga0126371_10625301	Not Available	1225	Open in IMG/M
3300022557\|Ga0212123_10000144	All Organisms → cellular organisms → Bacteria	240780	Open in IMG/M
3300022557\|Ga0212123_10001105	All Organisms → cellular organisms → Bacteria	78196	Open in IMG/M
3300026341\|Ga0257151_1034257	Not Available	546	Open in IMG/M
3300026359\|Ga0257163_1035756	Not Available	785	Open in IMG/M
3300027050\|Ga0209325_1000666	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300027050\|Ga0209325_1011555	Not Available	995	Open in IMG/M
3300027071\|Ga0209214_1000148	All Organisms → cellular organisms → Bacteria	3724	Open in IMG/M
3300027071\|Ga0209214_1062083	Not Available	509	Open in IMG/M
3300027109\|Ga0208603_1001060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4517	Open in IMG/M
3300027326\|Ga0209731_1028297	All Organisms → cellular organisms → Bacteria → PVC group	806	Open in IMG/M
3300027667\|Ga0209009_1004485	All Organisms → cellular organisms → Bacteria → Acidobacteria	3371	Open in IMG/M
3300027701\|Ga0209447_10044634	Not Available	1225	Open in IMG/M
3300027737\|Ga0209038_10031763	Not Available	1569	Open in IMG/M
3300027765\|Ga0209073_10096251	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300027767\|Ga0209655_10039761	Not Available	1577	Open in IMG/M
3300027783\|Ga0209448_10029445	Not Available	1831	Open in IMG/M
3300027853\|Ga0209274_10002661	All Organisms → cellular organisms → Bacteria → Acidobacteria	8688	Open in IMG/M
3300027875\|Ga0209283_10736803	Not Available	612	Open in IMG/M
3300027905\|Ga0209415_10300147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. S184	1386	Open in IMG/M
3300028906\|Ga0308309_10831065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300029636\|Ga0222749_10282388	Not Available	853	Open in IMG/M
3300031057\|Ga0170834_106344002	Not Available	830	Open in IMG/M
3300031231\|Ga0170824_111847442	Not Available	774	Open in IMG/M
3300031708\|Ga0310686_102674852	Not Available	1633	Open in IMG/M
3300031708\|Ga0310686_109756845	Not Available	525	Open in IMG/M
3300031708\|Ga0310686_112465127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1946	Open in IMG/M
3300031708\|Ga0310686_117181490	Not Available	635	Open in IMG/M
3300031718\|Ga0307474_10134511	All Organisms → cellular organisms → Bacteria	1860	Open in IMG/M
3300031718\|Ga0307474_10659125	Not Available	826	Open in IMG/M
3300031718\|Ga0307474_10975479	Not Available	671	Open in IMG/M
3300031719\|Ga0306917_10309708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
3300031720\|Ga0307469_10015299	All Organisms → cellular organisms → Bacteria	3963	Open in IMG/M
3300031720\|Ga0307469_10017615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3774	Open in IMG/M
3300031720\|Ga0307469_11867371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300031753\|Ga0307477_10001627	All Organisms → cellular organisms → Bacteria	18543	Open in IMG/M
3300031754\|Ga0307475_10086344	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300031754\|Ga0307475_10152977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832	Open in IMG/M
3300031754\|Ga0307475_10199008	Not Available	1601	Open in IMG/M
3300031754\|Ga0307475_10321707	Not Available	1242	Open in IMG/M
3300031823\|Ga0307478_11227624	Not Available	624	Open in IMG/M
3300031912\|Ga0306921_10178250	All Organisms → cellular organisms → Bacteria → Acidobacteria	2491	Open in IMG/M
3300031941\|Ga0310912_10017172	All Organisms → cellular organisms → Bacteria → Acidobacteria	4715	Open in IMG/M
3300031962\|Ga0307479_10271365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1676	Open in IMG/M
3300031962\|Ga0307479_10332441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1502	Open in IMG/M
3300031962\|Ga0307479_10488921	Not Available	1214	Open in IMG/M
3300031962\|Ga0307479_10958879	Not Available	826	Open in IMG/M
3300031962\|Ga0307479_11654756	Not Available	594	Open in IMG/M
3300032174\|Ga0307470_10302072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300032174\|Ga0307470_11286714	Not Available	598	Open in IMG/M
3300032180\|Ga0307471_100223794	Not Available	1908	Open in IMG/M
3300032205\|Ga0307472_100691764	Not Available	915	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.76%
Aquatic	Environmental → Aquatic	14.29%
Fungi	Host-Associated → Fungi	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.76%
Freshwater	Environmental → Aquatic → Freshwater	10.48%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.81%
Mycelium	Host-Associated → Fungi → Mycelium	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.76%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.81%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.76%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.95%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.95%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004602	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100121712	3300001356	Peatlands Soil	MYTYTCCRCTNCAAQTVLEDWADLYIHVVHGPPRPRAGREACPYCRAVFVPENYYVKESESPLLLRA*
JGI12269J14319_100599894	3300001356	Peatlands Soil	RCTNCAAQIVLEDWADLYIHVVHGPPRPRAGREACPYCRAVFVPENYYVMESESPLLLRA
JGI12269J14319_102143981	3300001356	Peatlands Soil	PRVPQSSKMEGGRIMYTYTCCRCTNCAAQIVLEDWADLYIHVVHGPPRPRAGREACPYCRAVFVPENYYVMESESPLLLRA*
Ga0068960_12425821	3300004602	Peatlands Soil	MYTYTCCRCTNCAAQIVLEDWADLYIHVVHGPPRPRAGREACPYCRAVFVPENYYVKESESPLLLRA*
Ga0070709_115865791	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MYTYTCCRCTNCAAQIVLEEQGGSNPSLFRKPARPRAGREACPYCRTVFVPETYYVAENETPLLQRA*
Ga0070697_1008050261	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYTYTCCRCMNCAAQIVLEEQGDSNTLFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQAFAPL
Ga0070733_100041125	3300005541	Surface Soil	MYTYICCRCTNCAAEIVLEDRADSESHLMHHPPRPRSGREACPYCRAVFVTENYYVKESGSPLLQRA*
Ga0070732_102414501	3300005542	Surface Soil	MYTYICCRCTNCSAQIVLEDRAESDMTHRPPRPRSGREACPYCRAVFVPETYYVKESGSPLLERV*
Ga0070761_100040526	3300005591	Soil	MHAYICCRCKNCTAQIVLEDLGDSDSNPLRRPPRPRAGREACPYCRAVFKAENYYMKESGTPLMQRA*
Ga0070763_100313853	3300005610	Soil	MYTYVCCRCENCSAQIVLEDRGSSDTNSLHRPPRPRAGREACPYCRAVFIPANYYITESGTPILQRA*
Ga0073928_1000091716	3300006893	Iron-Sulfur Acid Spring	MYTYICCRCTNCVAQIALEEQSGSKTNLFRRPVRPRAGREACPYCRAVFVPETYYVAESETPLLQRA*
Ga0073928_100034838	3300006893	Iron-Sulfur Acid Spring	MYAYTCCRCTNCAAQIVLEEQGGSDTNLFRRPVRPRAGREACPYCRAVFVPETCYVAESETPLLQQAFAPLVKPEAAS*
Ga0066793_106257402	3300009029	Prmafrost Soil	MYTYTCCRCTNCAAQIVLEDRADSDSIIHRPPRPRAGREACPYCRAVFVPENYYVKESGSPLLLRA*
Ga0099829_107665901	3300009038	Vadose Zone Soil	MYTYVCCRCTNCAAQILLEDREDPDTNLLHRVPRPRAGREACPYCRAVFVTRSYYITESIVPLALHARMQAAGKI*
Ga0116111_11388281	3300009616	Peatland	MYTYTCCRCTNCAAQIVLEDRADLYIHVIHGPPRPRAGREACPYCGAVFVPENYYFKESESPLLLRA*
Ga0126373_101491193	3300010048	Tropical Forest Soil	MYTYVCCRCVNCEARIPVDESGSNEVAFSRPSRPRTGREVCPYCRTVFVPESYYVTESETPLLQRVRKAHA*
Ga0126373_106311791	3300010048	Tropical Forest Soil	MYAYTCCRCTNCAAQIVLEEQGGSNTNLFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQALAPLVKRAAAS*
Ga0074044_100526382	3300010343	Bog Forest Soil	MHTYICCRCKNCTAQIVLEDLGDSDSNPLRRPPRPRAGREACPYCRTVFKPENYYMKESGTPLLQRA*
Ga0134126_102824652	3300010396	Terrestrial Soil	MYTYICCRCTNCAAEIALEDRADSDTHLAHRLPRPRSGREACPYCRAVFVPEGYYVKESGSPLLARV*
Ga0150983_111716042	3300011120	Forest Soil	MYTYMCCRCTKCEAQIVLEDRDTNLFHKPPRPRPGREACPYCRAVFVPERYYVKESGAPLTWLA*
Ga0150983_163300462	3300011120	Forest Soil	MYTYICCRCTNCTAQVVLEDQGGSESGLSRRPPRPRAGREACPYCRAVFVPASYYLTESGTPLFQRA*
Ga0137393_103363011	3300011271	Vadose Zone Soil	MYTYICCRCTNCAAQIVLDDREDPDTNLFRRIPRPRAGREACPYCRAVFVPQNYYIKE
Ga0137389_118384001	3300012096	Vadose Zone Soil	MYTYVCCRCVNCAAQILLEDREDPDTNLLHRVPRPRAGREACPYCRTVFVTQSYYITESIVPLALHARMQAAGKI*
Ga0137362_105945191	3300012205	Vadose Zone Soil	MYTYTCCRCMNCAAQIVLEEQGGSNTLFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQAFAPLVKRAAAS*
Ga0153928_10794561	3300012677	Attine Ant Fungus Gardens	MYAYICCRCTNCAAQIVLEEQGGSNTLFRRPHRPRAGREACPYCRTVFVPETYYLAESETPLLQRAFTPLVKRAAAS*
Ga0137359_104461252	3300012923	Vadose Zone Soil	MYVYTCCRCTNCAAQIVLEEQGGWDTNLFRRPPRPRAGREACPYCRTVFVPEKYYVAESETPLLQQAFAPLVKRAAAS*
Ga0137359_110621652	3300012923	Vadose Zone Soil	MYTYICCRCTNCAAQIVLEEQGGSNTNLSRRPARPRAGREACLYCRAVFVPETYYVAESETPLLQRA*
Ga0153915_107696461	3300012931	Freshwater Wetlands	MMYTYTCCRCTNCAAQIVLEDRADSDSIIHRPPRPRAGREACPYCRAVFVPENYYVKESGSPLLLRA*
Ga0182024_100908226	3300014501	Permafrost	MMYTYTCCRCTNCAAQIALEDWADSDTHLIHRPPRPRAGREACPYCRVVFVPESYYVKESESPLLMRA*
Ga0182024_108036242	3300014501	Permafrost	MYTYMCCRCIRCEAQIVLEDRADTNLLHKPPRPRPGREACPYCRAVFVPQSYYVRESGSPLALRA*
Ga0182024_114503441	3300014501	Permafrost	MYTYICCRCPNCTAQIVLEDRADSDTHLIHRTPRPRAGREACPYCRAVFVTETYYVVESGSPLLQGA*
Ga0182040_101296592	3300016387	Soil	MYAYTCCRCTNCAAQIALEEQGGSNTNLFRRPARPRAGREACPYCRTVFVPERYYVAENETPLLQRA
Ga0187821_100138744	3300017936	Freshwater Sediment	MYIYLCCRCTNCKAEILLEHRGDPYTNTAHHPPRPRAGREACPYCRELFLPQSYYEKVSAAPLQRAS
Ga0187817_100019791	3300017955	Freshwater Sediment	MYTYTCCRCTNCAAQIVLEDWADLYIHVVHGPPRPRAGREACPYCRAVFVPESYYVMESESPLLLRA
Ga0187805_103067591	3300018007	Freshwater Sediment	MYTYTCCRCTNCAAQIVLGDWADLYIHVVHGPPRPRGGREACPYCRAVFVPESYYVMESESPLLLRA
Ga0187873_11477072	3300018013	Peatland	IALEDRADSDTLVHRPPRPRAGREACPYCRAVFVPENYYVIESGSPLLVRAEERKRTSLS
Ga0187872_100091848	3300018017	Peatland	MYTYTCCRCTNCAAQIVLEDRADLYIHVIHGPPRPRAGREACPYCRAVFVPENYYVIESGSPLVLPA
Ga0182025_12795772	3300019786	Permafrost	MMYTYTCCRCTNCAAQIALEDWADSDTHLIHRPPRPRAGREACPYCRVVFVPESYYVKESESPLLMRA
Ga0210403_111859201	3300020580	Soil	MYTYICCRCTKCAAQIVLEYQANSDTELLHRPPRPRAGREACPYCREVFEPENYYFKESGTPLLWRAQVGTI
Ga0210399_100798896	3300020581	Soil	MYTYICCRCTNCTAQVVLEDQGGSESGLSRRPPRPRAGREACPYCRAVFVPASYYLTESGTPLFQRA
Ga0210399_101309812	3300020581	Soil	MFTYVCCRCSNCTAQIILEEQNSDAFRRLPRPRAGREACPYRRAVFVPETYYVTESGTPLLDRA
Ga0210401_111766531	3300020583	Soil	MYTYTCCRCTNCAAQIALEEWVDSDTHLVHGLPRPRVGREACPYCRAVFVAESYYIKESVSPLLMRASLHRTSTSH
Ga0210404_100947813	3300021088	Soil	MYTYVCCRCTNCEAQILLEDRGDPDINLLPRIPRPRAGREACPYCRVVFAPQSYYTTESVTPLALHA
Ga0210406_100069323	3300021168	Soil	MYAYTCCRCTNCAAQIVLEEQSGSNTNLFRRPARPRAGREACPYCRTVFVPEAYYVAEHETPLLQRA
Ga0210405_100057837	3300021171	Soil	MYAYTCCRCSNCAAQVVLEEQGGSNTLFCRPARPRAGREACPYCRMVFVPERYYVAESETPLLQQALAPLVKRAAAS
Ga0210405_100605854	3300021171	Soil	MYTYVCCRCINCEAQIVLEDRADTSLLHKLPRPHPVREACPYCRAVFVPQNYYVRESGSPLTLRA
Ga0210408_106473982	3300021178	Soil	MYTYVCCRCTQCEAQIVLEDRADTNLFHKLPRPRPVREACPYCRAVFVPQNYYVRESGSPLTLRA
Ga0210388_101002761	3300021181	Soil	MYIYTCCRCANCAAQIVLEEQGGSNTNLFRRPARPRAGREACPYCRTVFVPETYCVAENETPLLQRA
Ga0210387_100596222	3300021405	Soil	MYTYICCRCTNCTAQVVLEDQGGSEPGLSRRPPRPRAGREACPYCRAVFVPASYYLTESGTPLFQRA
Ga0210387_118368081	3300021405	Soil	MYTYICCRCTKCAAQIVLEYQANSDTELLHRPPRPRAGREACPYCREVFEPENYYFKESGTPL
Ga0210384_100057007	3300021432	Soil	MYTYVCCRCTNCAAQILLEDRGDPDMNLLPRVPRPRAGREACPYCQAVFAPQSYYTTQSVTPLALHA
Ga0210384_111522062	3300021432	Soil	MYTYVCCRCTNCAAQIFLEDRGDPDMKALPRVPRPRAGREACPYCRAVFEPQSYYIAESDAPLALHA
Ga0126371_104744451	3300021560	Tropical Forest Soil	MYIYTCCRCTNCAAQIVLEEQGGSNTNLFRRPARPRAGREACPYCRTVFVPETYYVAENETPLLERAQTERFVR
Ga0126371_106253011	3300021560	Tropical Forest Soil	MYTYVCCRCVNCEAQIPLDESGSDEVAFSRPSRPRTGREVCPYCRRVFVPESYYVTESETPLLQRVRKAHA
Ga0212123_10000144202	3300022557	Iron-Sulfur Acid Spring	MYAYTCCRCTNCAAQIVLEEQGGSDTNLFRRPVRPRAGREACPYCRAVFVPETCYVAESETPLLQQAFAPLVKPEAAS
Ga0212123_1000110513	3300022557	Iron-Sulfur Acid Spring	MYTYICCRCTNCVAQIALEEQSGSKTNLFRRPVRPRAGREACPYCRAVFVPETYYVAESETPLLQRA
Ga0257151_10342571	3300026341	Soil	MYTYVCCRCANCAAQILLEDRGDPDMNLLLRVPRPRAGREACPYCRTVFVPQSYYTKESLAPLAM
Ga0257163_10357562	3300026359	Soil	MYTYVCCRCTNCAAQILLEDRGDPDMNFLPRVPRPRAGREACPYCRAVFVPQSYYTTESVEPLAMHA
Ga0209325_10006662	3300027050	Forest Soil	MYTYTCCRCTNCAAQIVLEEQGDSNTLFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQAFAPLVKRAAAS
Ga0209325_10115551	3300027050	Forest Soil	MYTYTCCRCTNCAAQIVLEEQGGSNTLFHRPPRPRAGREACPYCRTVFVPETYYVAESETPLLQQAFAPLVKRAAAS
Ga0209214_10001488	3300027071	Forest Soil	MYVYTCCRCTNCTAQIVLEEQGGSNINLFRRPARPRAGREACPYCRTVFVPETYYVAENETPLLQRA
Ga0209214_10620831	3300027071	Forest Soil	MYTYTCCRCTNCGAQIVLEEQGGSNTNLFRRPARPRAGREACPYCRTVFAAETYYVAENETPLLERA
Ga0208603_10010603	3300027109	Forest Soil	MYTYVCCRCENCSAQIVLEDRGSSDTNSLHRPPRPRAGREACPYCRAVFIPANYYITESGTPILQRA
Ga0209731_10282972	3300027326	Forest Soil	MYTYICCRCTNCAAQIVLEEQGGSNLFRRPARPRAGREACPYCRTVFVPEAYYVAESETPLLQRA
Ga0209009_10044852	3300027667	Forest Soil	MYTYVCCRCINCEAQIVLEDRADTNLLHKLPRPHPGREACPFCRAVFVPQNYYVRESGSPLTLRA
Ga0209447_100446341	3300027701	Bog Forest Soil	MHTYICCRCKNCTAQIVLEDLGDSDSNPLRRPPGPRAGREACPYCRAVFKPENYYMKESGTSLLQRA
Ga0209038_100317632	3300027737	Bog Forest Soil	MPTYICCRCKNCTAQIVLEDLGDSDSNPLRRPPRPRAGREACPYCRAVFKPQNYYMKESGTPLLQQRA
Ga0209073_100962512	3300027765	Agricultural Soil	MYTYICCRCTNCSAQIVLEDRAESDMIHRPPRPRSGREACPYCRAVFVPEGYYVKESGSPLLERV
Ga0209655_100397611	3300027767	Bog Forest Soil	MHTYICCRCKNCTAQIVLEDLADSDSNPLRRPPRPRAGREACPYCRAVFKPENYYMKESGTPLLQRA
Ga0209448_100294452	3300027783	Bog Forest Soil	MHTYICCRCKNCTAQIVLEDLGDSDSNPLRRPPRPRAGREACPYCRAVFKPENYYMKESGTSLLQRA
Ga0209274_100026615	3300027853	Soil	MHAYICCRCKNCTAQIVLEDLGDSDSNPLRRPPRPRAGREACPYCRAVFKAENYYMKESGTPLMQRA
Ga0209283_107368031	3300027875	Vadose Zone Soil	VNCAAQILLEDREDPDTNLLHRVPRPRAGREACPYCRTVFVTQSYYITESIVPLALHARMQAAGKI
Ga0209415_103001472	3300027905	Peatlands Soil	TNCAAQIVLEDWADLYIHVVHGPPRPRAGREACPYCRAVFVPENYYVMESESPLLLRA
Ga0308309_108310652	3300028906	Soil	MYTYVCCRCINCEAQIVLEDRADTSLFHKLPRPHPVREACPYCRAVFVPQNYYVRESGSPLTLRA
Ga0222749_102823882	3300029636	Soil	MYTYVCCRCTNCEAQILLEDRGDPDINLLPRIPRPRAGREACPYCRVVFAPQSYYTTESV
Ga0170834_1063440021	3300031057	Forest Soil	MYAYTCCRCSNCAAQVVLEEQGGSNTLFCRPARPRAGREACPYCRMVFVPEKYYVAESETPLLQQALAPLVKRAAAS
Ga0170824_1118474422	3300031231	Forest Soil	MYTYICCRCTNCSAQIVLEDRAESDMVHRPPRPRSGREACPYCRAVFVPESYYVKESGSPLLERV
Ga0310686_1026748521	3300031708	Soil	MHTYICCRCKNCTAQIVLEDLGESDIYPLNRPSRPRAGREACPYCRAVFKPVNYYMTESGTPLVLRAEA
Ga0310686_1097568451	3300031708	Soil	MYTYVCCRCTNCAAQILLEDREEPDTNLLHRVPRPRAGREACPYCRTVFVPQSYYIKESAAPLAWHA
Ga0310686_1124651272	3300031708	Soil	MHTYICCRCKNCTAQIVLEDLADSDSNPLRRPPRPRAGREACPYCRAVFKPENYYMKESGTPLLQQRA
Ga0310686_1171814902	3300031708	Soil	MYTYVCCRCKNCTVQIVLEDRAYSDTNSLHRPPRPRAGREACPYCRAVFVPENYYVTESWSPLLVRA
Ga0307474_101345115	3300031718	Hardwood Forest Soil	MYTYVCCRCKNCTAQIVLEDRVGSDSTSLHRPPRPRAGREACPYCRAVFVPENYYVVESGSPLLQRA
Ga0307474_106591251	3300031718	Hardwood Forest Soil	MYTYTCCRCTNCAAQIVLEEQGGSNTLFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQ
Ga0307474_109754791	3300031718	Hardwood Forest Soil	MYTYICCRCKNCTAQIVLEDRGDSDTNSFLRPPRPRAGRESCPYCRAVFVPESYFVKESGTPLLLRA
Ga0306917_103097083	3300031719	Soil	MYIYTCCRCTNCAAQIVLEEQGVSNTNLFRRPARPRAGREACPYCRTVFVPETYYV
Ga0307469_100152991	3300031720	Hardwood Forest Soil	CTNCAAQIVLEEQGDSNILFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQAFAPLVKRAAAS
Ga0307469_100176152	3300031720	Hardwood Forest Soil	MQDSIIYTYTCCRCTNCAAQIVLEEQGGSNTLFRGPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQPKKEPFLLH
Ga0307469_118673712	3300031720	Hardwood Forest Soil	QIVLEEQGGSNTNLFRRPARPRAGREACPYCRTVFVPETYYVAENETPLLERAQTERFVR
Ga0307477_100016274	3300031753	Hardwood Forest Soil	MYTYVCCRCTQCEAQIVLEDRADTNLFHKLPRPHPVREACPYCRAVFVPQNYYVRESGSPLTLRA
Ga0307475_100863443	3300031754	Hardwood Forest Soil	MYTYTCCRCTNCAAQIVLEELGGSNTLLHRPARPRAGREACPYCRTVFVSEKYYIAESETPLLERA
Ga0307475_101529772	3300031754	Hardwood Forest Soil	MYTYICCRCTNCVAQIALEEQSGSNTNLFRGPVRPRAGREACPYCRTVFAPETYYVAQSETPLLQRA
Ga0307475_101990083	3300031754	Hardwood Forest Soil	MYTYICCRCTNCVAQIALEEQSGSNTNLFRRPVRPRAGREACPYCRSVFVPDTYYVADSETPLLQRA
Ga0307475_103217071	3300031754	Hardwood Forest Soil	MYAYTCCRCTNCAAQIVLEEQGGWDTNLFRRPPRPRARREACPYCRTVFVPETYYVAESETPLLQQAFAPLVKRAAAS
Ga0307478_112276241	3300031823	Hardwood Forest Soil	MYTYVCCRCTNCAAQILLEDRGDPDMNLLPRVPRPRAGREACPYCQAVFAPQSYYTTESVTPLALHA
Ga0306921_101782505	3300031912	Soil	MYTYVCCRCVNCEAQIPVDESGSDEVASSRPSRPRTGREVCPYCRTVFVPESYYVTESETPLLQRVRKASA
Ga0310912_100171724	3300031941	Soil	MYIYTCCRCTNCAAQIVLEEQGVSNTNLFRRPARPRAGREACPYCRTVFVPETYYVAENETPLLERAQTERFVR
Ga0307479_102713651	3300031962	Hardwood Forest Soil	MYAYTCCRCTNCAAQIVLEEQGGWDTNLFRRPPRPRAGREACPYCRTVFVPETYYVAESETPLLQQAFAPLVKRAAAS
Ga0307479_103324411	3300031962	Hardwood Forest Soil	AQIALEEQSGSNTNLFRGPVRPRAGREACPYCRTVFAPETYYVAESETPLLQRA
Ga0307479_104889212	3300031962	Hardwood Forest Soil	MYAYTCCRCTNCAAQIVLEEQGGSDTLFRRPARPRAGHEACPYCRTVFVPETYYVAESETPLLQQAFAPLVKRAAAS
Ga0307479_109588791	3300031962	Hardwood Forest Soil	MYTYTCCRCTNCAAQIVLEEQGGSNTLFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQAFTPLVKRAAAS
Ga0307479_116547561	3300031962	Hardwood Forest Soil	MYTYVCCRCKNCTAQIVLEDRVGSDSTSLHRPPRPRAGREACPYCRAVFVPENYY
Ga0307470_103020722	3300032174	Hardwood Forest Soil	MYTYICCRCTNCVAQIALEEQSGSNTNLFRGPVRPRAGREACPYCRTVFAPETYYVAESETPLLQRA
Ga0307470_112867141	3300032174	Hardwood Forest Soil	TYTCCRCTNCAAQIVLEEQGDSNTLFRRPARPRAGREACPYCRTVFVPEKYYVAESETPLLQQAFAPLVKRAAAS
Ga0307471_1002237943	3300032180	Hardwood Forest Soil	MYAYTCCRCSNCAAQVVLEEQGGSNVLFCRPARPRAGREACPYCRMVFVPETYYVAESETPLLQQALAPLVKRAAAS
Ga0307472_1006917643	3300032205	Hardwood Forest Soil	TNCAAQIVLEEQGGSNTLFHRPPRPRAGREACPYCRTVFVPETYYVAESETPLLQQAFAPLVKRAAAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences