NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095051

Metagenome Family F095051

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095051
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 47 residues
Representative Sequence MNTFTITFKNALGELKTEEMTLDFITVQGVVAWFEETIGLRVKSISKH
Number of Associated Samples 75
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.95 %
% of genes near scaffold ends (potentially truncated) 19.05 %
% of genes from short scaffolds (< 2000 bps) 77.14 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (75.238 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(35.238 % of family members)
Environment Ontology (ENVO) Unclassified
(76.190 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.476 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.47%    β-sheet: 28.95%    Coil/Unstructured: 56.58%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.70
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.89.1.2: Origin of replication-binding domain, RBD-liked1r9wa_1r9w0.71
d.89.1.2: Origin of replication-binding domain, RBD-liked1f08a11f080.7
d.265.1.2: Pseudouridine synthased1s71a11s710.67
d.265.1.1: Pseudouridine synthased1dj0a_1dj00.66
d.265.1.2: Pseudouridine synthased2apoa22apo0.66


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF05766NinG 10.48
PF00149Metallophos 4.76
PF04404ERF 4.76
PF04466Terminase_3 4.76
PF08299Bac_DnaA_C 3.81
PF11753DUF3310 2.86
PF08291Peptidase_M15_3 1.90
PF00436SSB 0.95
PF14550Peptidase_S78_2 0.95
PF05050Methyltransf_21 0.95
PF12684DUF3799 0.95
PF05154TM2 0.95
PF02195ParBc 0.95
PF027395_3_exonuc_N 0.95
PF11351GTA_holin_3TM 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1783Phage terminase large subunitMobilome: prophages, transposons [X] 4.76
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 3.81
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 0.95
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 0.95
COG2314Uncharacterized membrane protein YozV, TM2 domain, contains pTyrGeneral function prediction only [R] 0.95
COG2965Primosomal replication protein NReplication, recombination and repair [L] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.24 %
All OrganismsrootAll Organisms24.76 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10025237All Organisms → Viruses → Predicted Viral3369Open in IMG/M
3300000101|DelMOSum2010_c10050803Not Available2073Open in IMG/M
3300000101|DelMOSum2010_c10079459Not Available1461Open in IMG/M
3300000101|DelMOSum2010_c10103179Not Available1177Open in IMG/M
3300000101|DelMOSum2010_c10119503Not Available1041Open in IMG/M
3300000101|DelMOSum2010_c10169053Not Available774Open in IMG/M
3300000101|DelMOSum2010_c10203307Not Available663Open in IMG/M
3300000115|DelMOSum2011_c10028964All Organisms → Viruses2484Open in IMG/M
3300000115|DelMOSum2011_c10082850Not Available1107Open in IMG/M
3300000115|DelMOSum2011_c10108074Not Available895Open in IMG/M
3300000115|DelMOSum2011_c10158496Not Available664Open in IMG/M
3300000116|DelMOSpr2010_c10032159All Organisms → Viruses2442Open in IMG/M
3300000116|DelMOSpr2010_c10121509Not Available942Open in IMG/M
3300001344|JGI20152J14361_10110591Not Available533Open in IMG/M
3300001344|JGI20152J14361_10115354Not Available515Open in IMG/M
3300001352|JGI20157J14317_10166016Not Available667Open in IMG/M
3300005239|Ga0073579_1184212Not Available6528Open in IMG/M
3300006029|Ga0075466_1082522Not Available894Open in IMG/M
3300006029|Ga0075466_1160332Not Available574Open in IMG/M
3300006874|Ga0075475_10135227Not Available1091Open in IMG/M
3300006916|Ga0070750_10081964Not Available1512Open in IMG/M
3300006920|Ga0070748_1002945Not Available7844Open in IMG/M
3300006920|Ga0070748_1022926All Organisms → Viruses → Predicted Viral2603Open in IMG/M
3300006920|Ga0070748_1270254Not Available608Open in IMG/M
3300007229|Ga0075468_10141527Not Available733Open in IMG/M
3300007229|Ga0075468_10170328Not Available649Open in IMG/M
3300007231|Ga0075469_10005661Not Available5119Open in IMG/M
3300007231|Ga0075469_10045817Not Available1334Open in IMG/M
3300007231|Ga0075469_10050168Not Available1258Open in IMG/M
3300007276|Ga0070747_1018662All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2846Open in IMG/M
3300007344|Ga0070745_1288898Not Available586Open in IMG/M
3300007538|Ga0099851_1140847Not Available902Open in IMG/M
3300007538|Ga0099851_1218714Not Available689Open in IMG/M
3300007539|Ga0099849_1002104Not Available9253Open in IMG/M
3300007540|Ga0099847_1045710Not Available1385Open in IMG/M
3300007540|Ga0099847_1046312Not Available1375Open in IMG/M
3300007640|Ga0070751_1217875Not Available736Open in IMG/M
3300008470|Ga0115371_10081524Not Available1437Open in IMG/M
3300009002|Ga0102810_1077919Not Available1041Open in IMG/M
3300009074|Ga0115549_1190592All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.656Open in IMG/M
3300009074|Ga0115549_1302070Not Available505Open in IMG/M
3300009420|Ga0114994_10684940All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae669Open in IMG/M
3300009426|Ga0115547_1175325Not Available680Open in IMG/M
3300009428|Ga0114915_1023569All Organisms → Viruses → Predicted Viral2173Open in IMG/M
3300009432|Ga0115005_10532922Not Available938Open in IMG/M
3300009436|Ga0115008_10711138Not Available730Open in IMG/M
3300009436|Ga0115008_11339274Not Available548Open in IMG/M
3300009526|Ga0115004_10676273Not Available612Open in IMG/M
3300010153|Ga0098059_1015235All Organisms → Viruses → Predicted Viral3181Open in IMG/M
3300010300|Ga0129351_1141228Not Available954Open in IMG/M
3300010368|Ga0129324_10036735All Organisms → Viruses → Predicted Viral2305Open in IMG/M
3300010392|Ga0118731_104079930All Organisms → Viruses → Predicted Viral1284Open in IMG/M
3300010430|Ga0118733_109529739Not Available500Open in IMG/M
3300010883|Ga0133547_11650906All Organisms → Viruses → Predicted Viral1194Open in IMG/M
3300011254|Ga0151675_1065572All Organisms → cellular organisms → Bacteria → Synergistetes → Synergistia → Synergistales → Synergistaceae → unclassified Synergistaceae → Synergistaceae bacterium1575Open in IMG/M
3300013010|Ga0129327_10237591Not Available928Open in IMG/M
3300017697|Ga0180120_10294670Not Available650Open in IMG/M
3300017709|Ga0181387_1041981Not Available905Open in IMG/M
3300017709|Ga0181387_1075938Not Available678Open in IMG/M
3300017719|Ga0181390_1011970Not Available3017Open in IMG/M
3300017724|Ga0181388_1030657All Organisms → Viruses → Predicted Viral1324Open in IMG/M
3300017731|Ga0181416_1067834Not Available843Open in IMG/M
3300017769|Ga0187221_1188007Not Available600Open in IMG/M
3300021373|Ga0213865_10145396Not Available1219Open in IMG/M
3300021378|Ga0213861_10486950Not Available588Open in IMG/M
3300021957|Ga0222717_10029642Not Available3624Open in IMG/M
3300021957|Ga0222717_10097913Not Available1835Open in IMG/M
3300021959|Ga0222716_10595885Not Available604Open in IMG/M
3300022061|Ga0212023_1025716Not Available807Open in IMG/M
3300022068|Ga0212021_1093961Not Available616Open in IMG/M
3300022072|Ga0196889_1001373Not Available6598Open in IMG/M
3300022072|Ga0196889_1032858Not Available1045Open in IMG/M
3300022169|Ga0196903_1006721Not Available1482Open in IMG/M
3300022178|Ga0196887_1000729Not Available15069Open in IMG/M
3300022178|Ga0196887_1027112All Organisms → Viruses → Predicted Viral1637Open in IMG/M
3300022178|Ga0196887_1105964Not Available622Open in IMG/M
(restricted) 3300023210|Ga0233412_10099270Not Available1221Open in IMG/M
(restricted) 3300023276|Ga0233410_10094451Not Available923Open in IMG/M
3300024228|Ga0228633_1023524All Organisms → Viruses → Predicted Viral1680Open in IMG/M
3300024237|Ga0228653_1008409All Organisms → Viruses → environmental samples → uncultured marine virus2530Open in IMG/M
3300024293|Ga0228651_1047484Not Available1034Open in IMG/M
3300025276|Ga0208814_1005515All Organisms → Viruses → Predicted Viral4896Open in IMG/M
3300025570|Ga0208660_1047596All Organisms → Viruses → Predicted Viral1084Open in IMG/M
3300025590|Ga0209195_1101498Not Available635Open in IMG/M
3300025608|Ga0209654_1168379Not Available515Open in IMG/M
3300025620|Ga0209405_1051532All Organisms → Viruses → Predicted Viral1400Open in IMG/M
3300025620|Ga0209405_1066753All Organisms → Viruses → Predicted Viral1147Open in IMG/M
3300025645|Ga0208643_1004284All Organisms → cellular organisms → Bacteria6404Open in IMG/M
3300025645|Ga0208643_1081854Not Available918Open in IMG/M
3300025652|Ga0208134_1001242All Organisms → cellular organisms → Bacteria15024Open in IMG/M
3300025671|Ga0208898_1014226All Organisms → Viruses → Predicted Viral3790Open in IMG/M
3300025674|Ga0208162_1005771Not Available5680Open in IMG/M
3300025759|Ga0208899_1005092Not Available8115Open in IMG/M
3300025806|Ga0208545_1102480Not Available746Open in IMG/M
3300025806|Ga0208545_1110702Not Available703Open in IMG/M
3300027780|Ga0209502_10324738Not Available654Open in IMG/M
3300027801|Ga0209091_10454053Not Available567Open in IMG/M
3300027833|Ga0209092_10112222All Organisms → Viruses → Predicted Viral1606Open in IMG/M
3300027833|Ga0209092_10212256Not Available1084Open in IMG/M
3300027849|Ga0209712_10154341Not Available1313Open in IMG/M
(restricted) 3300028045|Ga0233414_10148510All Organisms → Viruses → Predicted Viral1035Open in IMG/M
3300031519|Ga0307488_10501607Not Available725Open in IMG/M
3300031539|Ga0307380_10875387Not Available732Open in IMG/M
3300031569|Ga0307489_10084460Not Available1804Open in IMG/M
3300033742|Ga0314858_032142Not Available1216Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous35.24%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine12.38%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine11.43%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.71%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.71%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater4.76%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.81%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.86%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.86%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.86%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean1.90%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.90%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.95%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.95%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.95%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.95%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.95%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.95%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001344Pelagic Microbial community sample from North Sea - COGITO 998_met_02EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007231Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011254Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02EnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300023276 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MGEnvironmentalOpen in IMG/M
3300024228Seawater microbial communities from Monterey Bay, California, United States - 41DEnvironmentalOpen in IMG/M
3300024237Seawater microbial communities from Monterey Bay, California, United States - 65DEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025570Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025590Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)EnvironmentalOpen in IMG/M
3300025608Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025620Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027780Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300033742Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawaterEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1002523753300000101MarineMNNTFTITFKNALGEFKTENVDLPFVTVQGVIAWFEDTLGLRIKSIEKH*
DelMOSum2010_1005080373300000101MarineMNTFTITFRNGLGEFKTEIMLLDFVTVQGVIDWFEETMGLRIKSISKH*
DelMOSum2010_1007945943300000101MarineMNTFTILFKNALGEFKTEDMVLPFGTVQGVANWFENTLGLRAKSISKH*
DelMOSum2010_1010317923300000101MarineMKNTFTVYFKNALGEFKSEDMILPFHSVQEVANWFEDTLGLRAKSISKH*
DelMOSum2010_1011950323300000101MarineMNTFTITFRNGLDELITENMSLDFSGVNGVCVWFENTLGLRVISISKH*
DelMOSum2010_1016905323300000101MarineMNTFTITFKDALGELKTEQITLDFVTVNGVIAWFIDVLGIRVKSITKH*
DelMOSum2010_1020330713300000101MarineMNTFTITFRNGLDELITEDMALDFSGVTGVCAWFESTLGIRVISISKH*
DelMOSum2011_1002896423300000115MarineMETFTILFKNALGEFKKEDMVLPFRTVQGVANWFENTLGLRAKSISKH*
DelMOSum2011_1008285023300000115MarineMNTFTITFRNGLDELITEDXTLDFSGVTGVCAWFESTLGIRVISISKH*
DelMOSum2011_1010807433300000115MarineMNTFTITFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISITKN*
DelMOSum2011_1015849613300000115MarineMNTFTITFKNALGELKTEEMVLDFISVQSVSAWFEETLGLRAKSISKH*
DelMOSpr2010_1003215963300000116MarineMNTFTITFKNGLGEFKTEEITLDFVTVRAAIDWFEETFGLRVKSMSKH*
DelMOSpr2010_1012150923300000116MarineMNTFTITFRNGLDELITEDMSLDFSGVNGVCVWFENTLGLRVISISKH*
JGI20152J14361_1011059133300001344Pelagic MarineMNTFTITFRNGLDELITEDITLDFIGVTGVCAWFENTLGIRVISISKH*
JGI20152J14361_1011535413300001344Pelagic MarineRQNIMNNTFTVLFKNALGEFKKEDMVLPFGTVQGVATWFEDTLGLRAKSISKH*
JGI20157J14317_1016601613300001352Pelagic MarineMKNTFTVHFKNALGEFKTEDMVLPFRTVQSVATWFEDTLGLRASSISKH*
Ga0073579_118421223300005239MarineMNTFTITFKNALGEFKTEEITLDFVTVQGVIAWFEETIGLRVKSISKH*
Ga0075466_108252243300006029AqueousMNTFTIKFKNALGEFKTEEITLDFVTVQGVIAWFEETMGLRVKSISKH*
Ga0075466_116033233300006029AqueousMNTFTITFRNGLDELITEDMTLDFSGVTGVCSWFESTLGIRVISISKH*
Ga0075475_1013522733300006874AqueousMNTFTITFKNALGELITEEMTLDFVTVQGVVAWFDETLGLGVKSISKH*
Ga0070750_1008196443300006916AqueousMNTFTITFKNALGELKTEEMTLDFITVQGVVAWFEETIGLRVKSISKH*
Ga0070748_100294513300006920AqueousMNTFTITFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISIT
Ga0070748_102292693300006920AqueousLKTEQMTLDFVTVNGVVAWFLDVLSIRVISITKN*
Ga0070748_127025433300006920AqueousMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFES
Ga0075468_1014152713300007229AqueousKQNIMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFESTLGIRVISISKH*
Ga0075468_1017032823300007229AqueousMNTFTVTFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISITKN*
Ga0075469_10005661103300007231AqueousMNTFTITFKNALGELITEDMILDFVGVQGVIAWFSDTFGLRIRSIKKH*
Ga0075469_1004581733300007231AqueousMNTFTVTFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISI
Ga0075469_1005016813300007231AqueousTFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISITKN*
Ga0070747_101866223300007276AqueousMNTFTITFKDALGELKTEEMALDFVTVNGVVAWFMDVLSIRIISITKN*
Ga0070745_128889823300007344AqueousMKKFTITFLNGLGERKTEIMTLDFVTVRAAIDWFEETFGLIVKSMSKH*
Ga0099851_114084723300007538AqueousMNTFTITFKNALGELKQEEMTLDFVSVSGVSAWFEETLGLRAQSIEKH*
Ga0099851_121871433300007538AqueousMNTFTITFKNAMEEMKTEDFHLDFVTVQGVIAHFDEVFGIRVKSITKH*
Ga0099849_1002104123300007539AqueousMNTFTITFKNALGEFKTEEMTLDFVTVQGVVAWFNETLGLGVKSISKH*
Ga0099847_104571013300007540AqueousMNTFTITFKNALGEFKTEEITLDFVTVRAAIDWFEETFGLRVKSMSKH*
Ga0099847_104631243300007540AqueousMNTFTITFRNGLDELITENMSLDFSGVTGVCVWFENTLGLRVISISKH*
Ga0070751_121787513300007640AqueousMNKFTITFLNGLGERKTEIMTLDFVTVRAAIDWFEETFGLRVKSMSKH*
Ga0115371_1008152453300008470SedimentMNTFTITFKNALGEFKTEIMLLDFVTVQGVISWFEETMGLRIKSISKH*
Ga0102810_107791923300009002EstuarineMNTFTITFKNGLEELVTEDMVLDFVTVKGVSAWFENTLGLRIKSIEKH*
Ga0115549_119059223300009074Pelagic MarineMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFESTLGLRVISISKH*
Ga0115549_130207023300009074Pelagic MarineMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFESTLGIRVISISKH*
Ga0114994_1068494033300009420MarineMNTFTITFKNGLDELITEDMTLDFVTVNGVIAWFEETFGLRVKSIKKH*
Ga0115547_117532513300009426Pelagic MarineMNNTFTVLFKNALGEFKKEDMVLPFGTVQGVATWFEDTLGLRAKSISKH*
Ga0114915_102356933300009428Deep OceanMNTFTITFKNALGEFKTEQMYLDFITVSGVIAWFDETLGLRVQSIEKH*
Ga0115005_1053292233300009432MarineMNTFTITFRNGLDELLTEDMTLDFSGVTGVCSWFESTLGIRVISISKH*
Ga0115008_1071113813300009436MarineITFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISISKN*
Ga0115008_1133927423300009436MarineMNTFTITFKDALGELKTEQMTLDFVTVNGVVAWFIDVLSIRVISISKN*
Ga0115004_1067627343300009526MarineMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFENTLGIRVISISKH*
Ga0098059_101523533300010153MarineMNTFTITFKNALGELITEDMNLDFITTSGVIAWFEDTFGLRIKSITKH*
Ga0129351_114122833300010300Freshwater To Marine Saline GradientMNTFTITFKNALGEFKTEEMTLDFVTVQGVVAWFNETLGLG
Ga0129324_1003673563300010368Freshwater To Marine Saline GradientMNTFTITFKNGLGEFKTEEITLDFVTVRAAIDWFEETFGLKVKSMSKH*
Ga0118731_10407993013300010392MarineELKTEQVTLDFHTVSGVIAWFIDVLGIRVISISKH*
Ga0118733_10952973913300010430Marine SedimentMNTFTVTFKDALGELKTEEMTLDFVTVNGVVAWFIDILGIRVISI
Ga0133547_1165090623300010883MarineMKNTFTVHFKNALGEFKSEDMVLPFHSVHDVATWFEDTLGLRAKSISKH*
Ga0151675_106557253300011254MarineMNTFTVTFKNALGQIITEQMHLDFITVSAVISWFEDTFGLRVKSITKH*
Ga0129327_1023759133300013010Freshwater To Marine Saline GradientMNTFTITFRNGLDELITEDITLDFSGVTGVCAWFESTLGIRVISISKH*
Ga0180120_1029467033300017697Freshwater To Marine Saline GradientMNTFTITFRNGLDELITEDITLDFIGVTGVCAWFESTLGIRVISISKH
Ga0181387_104198133300017709SeawaterMNTFTILFKNSLGEFRKEKMQLPFHSVISVEKWFEEVLGLRAKSISKH
Ga0181387_107593823300017709SeawaterMKNTFTIHFKNSLGEFKTEDMVLPFHSVHSVSTWFEDTLGLRAMSISKH
Ga0181390_101197023300017719SeawaterMNTFTITFKDALGNLKTEVMLLDFITVQGVSAWFEDTLGLRAISISKH
Ga0181388_103065733300017724SeawaterMNTFTILFRNAMGEIITEDMTLRFNTVNGVIEWFENTLGLRIMSISKH
Ga0181416_106783433300017731SeawaterMNTFTILFRNAMGEVITEDMTLDFNGVNGVIAWFEETLGLRIMS
Ga0187221_118800733300017769SeawaterMNTFTINFKNALGEFKTEEITLDFVTVQGVVAWFEETMGLRVKSISKH
Ga0213865_1014539623300021373SeawaterMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFESTLGIRVISISKH
Ga0213861_1048695013300021378SeawaterMNTFTITFKDALGELKTEEMNLDFVTVQGVDAWFFETLGIRVISISKH
Ga0222717_1002964233300021957Estuarine WaterMNTFTITFKDALGELKTEQMTLDFQTVNGVVAWFIDVLGIRIISISKH
Ga0222717_1009791313300021957Estuarine WaterMNTFTISFKNALGEFKTEKITLDFVTVQGVVAWFEETIGLRVKSISKH
Ga0222716_1059588513300021959Estuarine WaterMNTFTISFKKALGEFKTEKITLDFVTVQGVVAWFEETIGLRVKSISKH
Ga0212023_102571613300022061AqueousMNTFTIKFKNALGEFKTEEITLDFVTVQGVIAWFEETMGLRVKSISKH
Ga0212021_109396123300022068AqueousMNTFTITFKNALGELKTEEMTLDFITVQGVVAWFEETIGLRVKSISKH
Ga0196889_100137373300022072AqueousMNTFTITFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISITKN
Ga0196889_103285813300022072AqueousMNTFTITFRNGLDELITENMSLDFSGVNGVCVWFENTLGLRVISISKH
Ga0196903_100672163300022169AqueousMNTFTITFRNGLDELITEDITLDFSGVTGVCAWFESTLGIRVISISKH
Ga0196887_1000729233300022178AqueousMNTFTITFKNALGELITEDMILDFVGVQGVIAWFSDTFGLRIRSIKKH
Ga0196887_102711213300022178AqueousMNTFTVTFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISITK
Ga0196887_110596423300022178AqueousMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFESTLGLRVISISKH
(restricted) Ga0233412_1009927013300023210SeawaterMNTFTILFKNALGEFKKEDMVLPFVTVQGVATWFEDTLGLRAKSISKH
(restricted) Ga0233410_1009445123300023276SeawaterMNTFTITFINALYELKTEEMTLDFVTVQGVDAWFLETLGIRVISISKH
Ga0228633_102352453300024228SeawaterMNTFTITFKNGLGEFKTEEITLDFVTVQGVIAWFEETIGLRVKSISKH
Ga0228653_100840913300024237SeawaterMNKFTITFKNGLGESKTEIMTLDFVTVRAAIDWFEETFGLKVRSMSKH
Ga0228651_104748413300024293SeawaterIKTKIMNKFTITFKNGLGESKTEIMTLDFVTVRAAIDWFEETFGLKVRSMSKH
Ga0208814_1005515113300025276Deep OceanMNTFTITFKNALGEFKTEQMYLDFITVSGVIAWFDETLGLRVQSIEKH
Ga0208660_104759653300025570AqueousMNTFTITFRNGLDELITEDMTLDFSGVTGVCSWFESTLGIRVISISKH
Ga0209195_110149813300025590Pelagic MarineMNNTFTVLFKNALGEFKKEDMVLPFGTVQGVATWFEDTLGLRAKSISKH
Ga0209654_116837913300025608MarineNIMETFTILFKNALGEFKKEDMVLPFSTVQGVANWFENTLGLRAKSISKH
Ga0209405_105153213300025620Pelagic MarineMKNTFTVHFKNALGEFKTEDMVLPFRTVQSVATWFEDTLGLRASSISKH
Ga0209405_106675333300025620Pelagic MarineMNTFTITFRNGLDELITENMSLDFSGVTGVCVWFENTLGLRVISISKH
Ga0208643_100428453300025645AqueousMNTFTVTFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISITKN
Ga0208643_108185443300025645AqueousKQNIMNTFTITFRNGLDELITEDITLDFSGVTGVCAWFESTLGIRVISISKH
Ga0208134_100124263300025652AqueousMNTFTITFKDALGELKTEEMALDFVTVNGVVAWFMDVLSIRIISITKN
Ga0208898_101422693300025671AqueousMNTFTITFKNALGELITEEMTLDFVTVQGVVAWFDETLGLGVKSISKH
Ga0208162_100577153300025674AqueousMNTFTITFKNALGEFKTEEMTLDFVTVQGVVAWFNETLGLGVKSISKH
Ga0208899_100509213300025759AqueousMNTFTITFKNRLGEIKKEEFFLDFYSVQAVFNWFED
Ga0208545_110248013300025806AqueousMNTFTITFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISI
Ga0208545_111070243300025806AqueousNIMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFESTLGIRVISISKH
Ga0209502_1032473813300027780MarineMNTFTITFRNGLDELITEDMTLDFSGVTGVCAWFENTLGIRVISISKH
Ga0209091_1045405323300027801MarineMKNTFTVHFKNALGEFKTEDMVLPFHSVQEVSNWFEDTLGLRAKSISKH
Ga0209092_1011222213300027833MarineFTITFKDALGELKTEQMTLDFVTVNGVVAWFLDVLSIRVISISKN
Ga0209092_1021225643300027833MarineMNTFTITFKDALGELKTEEMRLDFVTVNGVSAWFMDVLSIRIISITKN
Ga0209712_1015434143300027849MarineMNTFTITFRNGLDELLTEDMTLDFSGVTGVCSWFESTLGIRVISISKH
(restricted) Ga0233414_1014851023300028045SeawaterMNKFTITFKNALGELITEDMTLKFNGVTAVTIWFENTLGLRVKSISKH
Ga0307488_1050160713300031519Sackhole BrineMNTFTITFKNAMEEMKTEDFHLDFVTVQGVIAYFDEVFGIRVKSITKH
Ga0307380_1087538733300031539SoilMNTFTITFKNALGELKQEVMTLDFVSVSGVSAWFEETLGLRAKSISKH
Ga0307489_1008446023300031569Sackhole BrineMSTFTIVFKNALGEFKTELVVLPFSTVQGVANWFEDTLGLRAKSISKHKN
Ga0314858_032142_120_2663300033742Sea-Ice BrineMNTFTITFKNAMEEMKTENFHLDFVTVQGVIAHFEEVFGIRVKSITKH


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